mRNA_P-wetherbeei_contig16978.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Match: A0A836CCG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCG5_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.370e-30 Identity = 62/134 (46.27%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 1 LNFFGTAVAPVLYIRVNVDAAAATANISIESVELEGSEAVRSIRGAYNEIGQPTASFIPAATPP------MRLQVTLRVDLLVPRESWLPPTALEKGGSFVLQRVLDIGVPQFLRFLRRDYERWSAGDDSRAPV 384
LNFFG AV+PVL ++V V+ I + SVELEGS A+RS ++ A+ + P +R V+LR+++ VPRE+WLP AL +GG+F+LQR +D+ +PQF+R+L RDY RW+ GDD+RAPV
Sbjct: 83 LNFFGNAVSPVLLLQVRVEEGRGRVEIHVVSVELEGSPAIRSASDSFT---CECATVVTCGDPERGGRRALRSSVSLRIEVAVPRENWLPLGALTRGGTFILQRCMDLFLPQFVRYLARDYARWAEGDDARAPV 213
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Match: D7G8N2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N2_ECTSI) HSP 1 Score: 115 bits (288), Expect = 1.470e-28 Identity = 61/136 (44.85%), Postives = 84/136 (61.76%), Query Frame = 1
Query: 1 LNFFGTAVAPVLYIRVNVDAAAATANISIESVELEGSEAVRSIRGAYNEIGQPTASFIPAATPP-------MRLQVTLRVDLLVPRESWLPPTALEKGGSFVLQRVLDIGVPQFLRFLRRDYERWSAGDDSRAPVA 387
++ GT + PVL++RV V + ANI +E VEL+GSEAVRS G++N S P +R + ++LLVP E+++P L + G+FV+QRV+DIG+PQF FLRRDY RW+ GDD RA VA
Sbjct: 182 MSIVGTKIKPVLFVRVEVQPENSMANIMVERVELDGSEAVRSAGGSFNVSSSTVVSCAKKEGTPADANIMELRASSNIAIELLVPNENFVPVGVLRRAGNFVMQRVVDIGLPQFTYFLRRDYARWAEGDDDRAAVA 317
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Match: A0A4D9DB49_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB49_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.960e-12 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 1
Query: 79 ISIESVELEGSEAVRSIRGAYNEIGQPTASFIPAATPPMRL---QVTLRVDLLVPRESWLPPTALEKGGSFVLQRVLDIGVPQFLRFLRRDYERWSAGDDSRAPVA 387
++I ++L GS G + + SF P + V+++V VPR + +P LE GGS V+Q +L + VP+F++ L +DYE WS+GDDSRA VA
Sbjct: 89 LNIYRLDLTGSRIADIANGTFKVKARNVVSFRNTDMPRTKALMSTVSVQVQAQVPRGNVIPHHVLESGGSLVIQGILKVMVPRFVKILAKDYEVWSSGDDSRAAVA 194
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Match: A0A7S3C1G7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C1G7_9VIRI) HSP 1 Score: 64.3 bits (155), Expect = 4.930e-10 Identity = 50/128 (39.06%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 4 NFFGTAVAPVLYIRVNVDAAAATANISIESVELEGSEAVRSIRGAYNEIGQPTASFIPAATPPMRL---QVTLRVDLLVPRESWLPPT-ALEKGGSFVLQRVLDIGVPQFLRFLRRDYERWSAGDDSR 375
F G V PVL ++V A T IS+ S EL+GS + + ++ + S+ +L V+L VD+ VP L PT AL GS VLQ +L+I VP F+R L DY W+AGDDSR
Sbjct: 53 GFLGVRVEPVLTLQVATGARGCT--ISLLSTELQGSSLIVAQNDKFDARMRNEVSYNEGEAAGEKLITSSVSLEVDVQVPWAFRLLPTKALSASGSGVLQAMLNIMVPSFVRQLEGDYCAWAAGDDSR 178
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Match: W7TD01_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TD01_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 6.820e-10 Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 229 VPRESWLPPTALEKGGSFVLQRVLDIGVPQFLRFLRRDYERWSAGDDSRAPVA 387
VPR + +P LE GGS V+Q +L + VP+F++ L +DYE WS+GDDSRA VA
Sbjct: 10 VPRGNVIPHHVLESGGSLVIQGILKVMVPRFVKILAKDYEVWSSGDDSRAAVA 62
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Match: A0A0G4IAI8_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IAI8_9ALVE) HSP 1 Score: 62.8 bits (151), Expect = 5.750e-9 Identity = 28/69 (40.58%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 181 ATPPMRLQVTLRVDLLVPRESWLPPTALEKGGSFVLQRVLDIGVPQFLRFLRRDYERWSAGDDSRAPVA 387
A P + ++ ++V VP+ + +P +E GSFVLQR+L+I +P+FL+ LR D++RWSAG R+ ++
Sbjct: 248 APPMIETKMEIKVSAKVPKRTLVPARIVEATGSFVLQRILNIILPRFLKQLRADFDRWSAGSADRSALS 316
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Match: A0A8J4LM18_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LM18_9CHLO) HSP 1 Score: 58.5 bits (140), Expect = 1.480e-7 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 208 TLRVDLLVPR-ESWLPPTALEKGGSFVLQRVLDIGVPQFLRFLRRDYERWSAGDDSRAPV 384
T++V + VP S+LP +E GS V+Q VL++ VP+FL+ LR DYE W++GD SR PV
Sbjct: 221 TIQVCVEVPPWSSFLPVATIESVGSSVMQNVLNLMVPRFLKQLRSDYELWASGDVSRRPV 280
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Match: A0A8K0IMY2_COCNU (Uncharacterized protein n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0IMY2_COCNU) HSP 1 Score: 55.8 bits (133), Expect = 4.580e-7 Identity = 41/133 (30.83%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 1 LNFFGTAVAPVLYIRVNVDAAAATANISIESVELEGSEAVRSIRGAYNEIGQPTAS----FIPAATPPMRLQVTLRVDLLVPRE-SWLPPTALEKGGSFVLQRVLDIGVPQFLRFLRRDYERWSAGDDSRAPV 384
+ FF V PVL +RV+ + I + S +LEGS V + ++ S + P+ T+ V + +P +P A+E G+ VL+++L I +P+FLR L +DY W++GD SR P+
Sbjct: 31 IKFFAFEVCPVLVVRVDEEPDGCC--IRLLSCKLEGSPLVEAQNDKFSASMVNRVSCNGGMQNSGMQPLTTDTTIEVSIEIPFAFRAIPVEAIESTGTQVLEQLLRIMLPRFLRQLVKDYRAWASGDTSRQPL 161
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Match: Q10RT4_ORYSJ ((RAP Annotation release2) Galactose-binding like domain containing protein n=12 Tax=Oryzeae TaxID=147380 RepID=Q10RT4_ORYSJ) HSP 1 Score: 56.2 bits (134), Expect = 7.120e-7 Identity = 43/135 (31.85%), Postives = 71/135 (52.59%), Query Frame = 1
Query: 4 NFFGTAVAPVLYIRVNVDAAAATANISIESVELEGSEAVRSIRGAY-----NEI---GQPTASFIPAATPPMRLQVTLRVDLLVPRESWLPPTALEKGGSFVLQRVLDIGVPQFLRFLRRDYERWSAGDDSRAPV 384
FF V PVL +RV+ + IS+ S +LEGS V + + N++ + S T ++VT +D+ P + LP A+E G VL+++L + +P+FL+ L +DY+ W++GD SR P+
Sbjct: 96 RFFALEVCPVLLVRVDEEPNGCC--ISLLSCKLEGSPLVEAQNDKFSASMVNKVFCNSSMSDSTSQQLTSDTTIEVT--IDIPFPFRA-LPVEAIESSGKQVLEQLLRVMLPRFLKQLVKDYQAWASGDSSRKPL 225
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Match: A0A3B6JQI4_WHEAT (Uncharacterized protein n=4 Tax=Triticinae TaxID=1648030 RepID=A0A3B6JQI4_WHEAT) HSP 1 Score: 55.8 bits (133), Expect = 1.020e-6 Identity = 40/134 (29.85%), Postives = 70/134 (52.24%), Query Frame = 1
Query: 4 NFFGTAVAPVLYIRVNVDAAAATANISIESVELEGSEAVRSIRGAYNEIGQPTASFIPAATPPMRLQ-------VTLRVDLLVPRESWLPPTALEKGGSFVLQRVLDIGVPQFLRFLRRDYERWSAGDDSRAPV 384
FF V PVL +RV+ + I + S +LEGS V + ++ F +++ LQ + + +D+ P ++ LP A+E G VL+++L + +P+FL+ L +DY+ W++GD SR P+
Sbjct: 100 RFFALEVCPVLLVRVDEEPNGCC--IRLLSCKLEGSPLVEAQNDKFSA-SMVNRVFCNSSSEGSTLQQLTSDATIEVAIDIPFPFQA-LPVEAIESSGRQVLEQLLRVMLPRFLKQLDKDYQAWASGDSSRKPL 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16978.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16978.1.1 >prot_P-wetherbeei_contig16978.1.1 ID=prot_P-wetherbeei_contig16978.1.1|Name=mRNA_P-wetherbeei_contig16978.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp LNFFGTAVAPVLYIRVNVDAAAATANISIESVELEGSEAVRSIRGAYNEIback to top mRNA from alignment at P-wetherbeei_contig16978:258..1380+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16978.1.1 ID=mRNA_P-wetherbeei_contig16978.1.1|Name=mRNA_P-wetherbeei_contig16978.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1123bp|location=Sequence derived from alignment at P-wetherbeei_contig16978:258..1380+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16978:258..1380+ >mRNA_P-wetherbeei_contig16978.1.1 ID=mRNA_P-wetherbeei_contig16978.1.1|Name=mRNA_P-wetherbeei_contig16978.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig16978:258..1380+ (Phaeothamnion wetherbeei SAG_119_79)back to top |