mRNA_P-wetherbeei_contig16590.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16590.1.1
Unique NamemRNA_P-wetherbeei_contig16590.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Match: A0A836CJ47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ47_9STRA)

HSP 1 Score: 255 bits (651), Expect = 8.190e-79
Identity = 153/299 (51.17%), Postives = 169/299 (56.52%), Query Frame = 1
Query:    1 TSKVFCAEFFGRRLTMHSLSWGDRRRGIGPHVARTWVLDDRIGPAYSVVAVNLSIDEDDGWADDDGVDYGGGXXXXXGGVGRRRPTHLLVTSHECTYDYR---ARVDGPTPD---EILIGGSXXXXXXXXXXXXXXXXXXXXXXXLFAYEIPAKWKVYPRVYPSPGWRRHTIASGFRVRGLGINPGAPGFVYTFHP-HRSMRGK---TRPHIALAGDCSQAAYVLRPRVRDGGSDSSGSDGASGSSC---LDYELAARIDCGGTVGSLAVAYGPLTGASAMEDDSVAKIFVPSYDMNKV 858
            T +VF AEFF RRLTMHS+ WGD RRG    V ++WVLD   GPAYSVVA +L                         G+G   PTHLLVTSHEC YD R   A  D    D   EI +GG                        LFAYEIP  W+VYPRVYPSPGW+R TIASGFRV+GLGINPGAPGF Y FHP HR+        RP+IALAGDCSQAAYVLRP                   C   LDYEL  RIDC GTVGSLAV++GPL G     DD  AK+FVP+YD  KV
Sbjct:  141 TVEVFAAEFFARRLTMHSVRWGDARRGTQSQVVQSWVLDSNCGPAYSVVAADL----------------------LGTGLG---PTHLLVTSHECLYDNRLLKAAGDAAAEDGREEITVGGGGSGGA------------------LFAYEIPQLWRVYPRVYPSPGWKRTTIASGFRVKGLGINPGAPGFSYIFHPNHRAGEPAPPGARPYIALAGDCSQAAYVLRP-------------------CGVGLDYELVCRIDCEGTVGSLAVSHGPLCGGG---DDGCAKLFVPNYDQGKV 374          
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Match: A0A6H5KJ55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ55_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 4.750e-50
Identity = 124/334 (37.13%), Postives = 150/334 (44.91%), Query Frame = 1
Query:    1 TSKVFCAEFFGRRLTMHSLSWGDRRRGIGPHVARTWVLDDRIGPAYSVVAVNLSIDEDDGWADDDGVDYGGGXXXXXGGVGRRRPTHLLVTSHECTYDYRA--------------------------------------RVDGPTPDEILI----------------------GG--SXXXXXXXXXXXXXXXXXXXXXXXLFAYEIPAKWKVYPRVYPSPGWRRHTIASGFRVRGLGINPGAPGFVYTFHPHRSMRGKTRPHIALAGDCSQAAYVLRPRVRDGGSDSSGSDGA--------SGSSCLDYELAARIDCGGTVGSLAVAYGPLTG 792
            T +V CAEFFG R+TMHSL  G +  G  P V  +WVLDD  GPAYS+ A +L                        GG    RPTH LVT HE +Y+  +                                      R  G  PD   I                      GG  +                       L AYEIP  W++ PR YP+PGW R T+ASGFRVRG+ INPG PGF Y FHPHRSM GK  P+IA+AGDCSQ+AY+LRP     GS  + + G           ++ L YE+A  I+  GTVGSLAV+YG L G
Sbjct:  829 TVQVICAEFFGGRVTMHSLWGGGQLPGSQPSVTESWVLDDNAGPAYSITAADLR-----------------------GGSPGGRPTHFLVTVHESSYNTYSLFAGAGGIGXXXXXXXXXXXNFNPAXXXXXXXXXXAGSRHAGVEPDPAGIEAEKAAFRVPSEGTSRWEAGRWGGVVAGGPKERRWQRREEGRGNGGAGGSLVAYEIPEDWRMLPRFYPAPGWLRATLASGFRVRGISINPGTPGFPYLFHPHRSMEGKQPPYIAIAGDCSQSAYILRPAPAASGSAGTAAGGGPETKGAWEQEAAPLGYEIACAIEVPGTVGSLAVSYGQLLG 1139          
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Match: A0A4D9DCX2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCX2_9STRA)

HSP 1 Score: 170 bits (430), Expect = 4.480e-44
Identity = 125/350 (35.71%), Postives = 161/350 (46.00%), Query Frame = 1
Query:    7 KVFCAEFFGRRLTMHSLSWGDRRRGIGPHVARTWVLDDRIGPAYSVVAVNLSIDEDDGWADDDGVDYGGGXXXXXGGVGRRRPTHLLVTSHECTY---------------------DYRARVD------------------------GPTPDEILI-------------GGSXXXXXXXXXXXXXXXXXXXXXXXLFAYEIPAKWKVYPRVYPSPGWRRHTIASGFRVRGLG-INPGAPGFVYTFHPHRSMRGKT--RPHIALAGDCSQAAYVLRPRV-RDGGSDSSGSDGASGSSCLDYELAARIDCGGTVGSLAVAYGPLTGASAME----DDSVAKIFVPSYDMNKV 858
            +VF +EFF RRL++H +  GD R G  P V  + VLDD +GPAYSVV  +L                           G+ RP+H+LV+SHEC Y                     D R R +                        GP  + + +             GG                        LFAYEIP  W+          W+R T+A+GF V+  G INPGAPGF Y F+PHRS+RG+   RP+I LAGDCS AAY+ RP + RDGG    G D A     + YE  A+I+CGGTVGSLAV + PL    + E    DD  AKIF+P++D +KV
Sbjct:  628 EVFASEFFSRRLSLHRIIKGDWRTGRLPRVLTSEVLDDALGPAYSVVLADLR--------------------------GQGRPSHVLVSSHECQYEGLVEGGSVKEEGRRSGRQTRDERLRREAAAYAEEKETEARRSKDPLGLSGAGPILESVGLTGASGRALSDAVDGGREGTEGQNGAGIAADEGAALNGGSLFAYEIPPDWR------QRACWKRSTLATGFHVKNWGQINPGAPGFPYVFYPHRSLRGQPGQRPYILLAGDCSHAAYIYRPVLGRDGG----GGDEAE----VQYEPMAQINCGGTVGSLAVGHLPLAVGESEEWEEDDDGWAKIFIPNFDTDKV 937          
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Match: A0A7S4DAE7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAE7_HETAK)

HSP 1 Score: 150 bits (378), Expect = 1.690e-37
Identity = 108/268 (40.30%), Postives = 130/268 (48.51%), Query Frame = 1
Query:    7 KVFCAEFFGRRLTMHSLSWGDRRRGIGPH---VARTWVLDDRIGPAYSVVAVNLSIDEDDGWADDDGVDYGGGXXXXXGGVGRRRPTHLLVTSHECTYDYRARVDGPTPDEILIGGSXXXXXXXXXXXXXXXXXXXXXXXLFAYEIP-AKWKV--YPRVYPSPGWRRHTIASGFRV---RGLGINPGAPGFVYTFHPHR--SMRGKTRPHIALAGDCSQAAYVLRPRVRDGGSDSSGSDGASGSSCLDYELAARIDCGGTVGSLAVAY 777
            ++  AEFF  RLT+ SL+   RR  +GP+   V +  V+D   GPAY V A NL                         G     PTHLLVTSH C YD  +     + +EI  G                         L+AYEIP A W+V   P      GW R  +ASGFRV   +  G NPGAPGFVY FHP R  +  GK  P+IA+AGDC+QAAY+L P  R   SDS G  G S     DYE+   I CGGTVGSLA  +
Sbjct:  293 EIVAAEFFNERLTLTSLA--PRRDWLGPNKIQVKQKMVIDAGCGPAYGVTAANLRT-----------------------GRPGDPPTHLLVTSHACQYDPASDF---SVEEITCGSDRAGGGV-----------------LYAYEIPTANWQVGGAPAAEGWRGWERRALASGFRVHQDQPRGFNPGAPGFVYAFHPTRRAAREGKDPPYIAVAGDCAQAAYILAPAARHDKSDSGG--GYSIQKAADYEMLCMISCGGTVGSLAFGF 513          
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Match: A0A1Z5K689_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K689_FISSO)

HSP 1 Score: 144 bits (362), Expect = 1.010e-35
Identity = 103/294 (35.03%), Postives = 149/294 (50.68%), Query Frame = 1
Query:    1 TSKVFCAEFFGRRLTMHSLSWGDRRRGIGPHVARTWVLDDRIGPAYSVVAVNLSIDEDDGWADDDGVDYGGGXXXXXGGVGRRRPTHLLVTSHECTYDYRARVDGPTPD-EILIGGSXXXXXXXXXXXXXXXXXXXXXXXLFAYEIPA----KWKVYPRVYPSPGWRRHTIASGFRVRG-LG--INPGAPGFVYTFHPHRSMRGKTRPHIALAGDCSQAAYVLRPRVRDGGSDSSGSDGASGSSCLDYELAARIDCGGTVGSLAVAYGPLTGASAMEDDSVAKIFVPSYDMNKV 858
            T +V  ++FF  ++++HS+     +RG+ P V  +  +D+  G A+  +  +L I      A    VD G        G      +HLLVTSHEC YD     D      + L GGS                       LFAY +P      WK  P       W R T+A+GF+V+G LG  +NPGAPGFVYTFH H+  RGK RP IA+AGDC+++A+V RP       ++  +D    S    Y+L   I+CG TVGS+A+ Y   T  S+ +D   AK+++PS++ +K+
Sbjct:  280 TIEVLSSQFFPGKVSLHSI-----QRGLSPKVVFSRDIDENCGAAFGSILADLGITSTA--AQHVVVDSGSTVKTLEQGD---HFSHLLVTSHECLYDPGTSEDASQSKYQPLEGGS-----------------------LFAYRVPNGQADAWKTEP-------WVRTTVATGFKVKGKLGNMVNPGAPGFVYTFHAHKDDRGKKRPLIAVAGDCAESAFVFRP------DETLATDNEESSP--SYKLMMEIECGATVGSIAIGYDDFT--SSPQDTGYAKLYIPSFEKDKI 523          
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Match: A0A7S1G010_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G010_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.900e-31
Identity = 108/300 (36.00%), Postives = 142/300 (47.33%), Query Frame = 1
Query:    1 TSKVFCAEFFGRRLTMHSLSWGDRRRGIGPHVARTWVLDDRIGPAYSVVAVNLSIDEDDGWADDDGVDYGGGXXXXXGGVGRR--RP----THLLVTSHECTYDYRA--RVDGPTP----DEILIGGSXXXXXXXXXXXXXXXXXXXXXXXLFAYEIPAKWKVYPRVYPSPGWRRHTIASGFRVRG-LGINPGAPGFVYTFHPHRSMRGKT-RPHIALAGDCSQAAYVLRPRVRDGGSDSSGSDGASGSSCLDYELAARIDCGGTVGSLAVAYGPLTGASAMEDDSVAKIFVPSYDMNKV 858
            T  +  A+FFG+++T HSL     RRG  P V    V+DD  G +Y ++ VNLS  +D      D             G G    RP    TH+LVTSHE T    A    D  TP     + L+GGS                       LFAY         PR      W R T+A+GF+VR  L INPGAPGF Y F+P    R +  RPH+A++GDC++ AYVLRP   D   +  G   A       Y+L   IDC  TVGSLA+ Y      + ++    AKI+VP+Y+ +K+
Sbjct:  321 TIDIIAAQFFGKKVTCHSL-----RRGPRPEVISRHVIDDDCGASYGILLVNLSEKDDK-----DKTHVPSAPLVVAPGTGGDILRPGDTFTHVLVTSHERTQVDAAVGPADSDTPRLGDHQPLLGGS-----------------------LFAY-------APPRAPGEAAWTRKTVATGFQVRSQLLINPGAPGFCYAFYPTVEGRKRWGRPHLAISGDCAERAYVLRP---DDAPERRGMPHA-------YDLLCEIDCEATVGSLAIGYDDFC-QTDVKPHRWAKIYVPAYERDKI 569          
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Match: K0RTF0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RTF0_THAOC)

HSP 1 Score: 130 bits (327), Expect = 8.090e-31
Identity = 107/298 (35.91%), Postives = 140/298 (46.98%), Query Frame = 1
Query:    1 TSKVFCAEFFGRRLTMHSLSWGDRRRGIGPHVARTWVLDDRIGPAYSVVAVNLSIDEDDGWADDDGVDYGGGXXXXXGGVGRRRP----THLLVTSHECTYDYRARVDG-PTPDEILIGGSXXXXXXXXXXXXXXXXXXXXXXXLFAYEIP---AKWKVYPRVYPSPGWRRHTIASGFRVRG-LG--INPGAPGFVYTFHPHRSMRGKTRPHIALAGDCSQAAYVLRP-RVRDGGSDSSGSDGASGSSCLDYELAARIDCGGTVGSLAVAYGPLTGASAMEDDSVAKIFVPSYDMNKV 858
            T ++  ++FFG+RLT+HSL     + G+ P +    V+D   G A+S V  +L     DG AD    D           V   +     +H+LVTSHEC+Y     V+G P  D+   G                         LFAY IP     WK  P       WRR  +A+GF+V+G LG  I+PGAPGF YTF P        RP I LAGDC+Q+AY+L+P  V D   DS             Y L   I C  TVGSLAV Y  L  + A +    AKI+VP ++ +KV
Sbjct:  253 TVEIIASQFFGKRLTLHSL-----QIGVDPKIVFRRVIDHGCGSAFSSVLADL-----DGLADVRRSDLLPRVVDNGSTVATSKEGDAFSHVLVTSHECSY--ADGVEGKPKSDDSNNGAEPRQLYDGYEIDGGS---------LFAYRIPKGRGNWKSQP-------WRRSVVATGFKVQGQLGNMISPGAPGFAYTFFPTLDTTRWRRPLIGLAGDCAQSAYILKPVEVPD---DSRDVIEEVIDKSAKYNLMCEIKCEATVGSLAVGYEDLHASEADQQSGYAKIYVPCFEKDKV 519          
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Match: B7FQ82_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ82_PHATC)

HSP 1 Score: 130 bits (327), Expect = 1.890e-30
Identity = 105/309 (33.98%), Postives = 148/309 (47.90%), Query Frame = 1
Query:    1 TSKVFCAEFFGRRLTMHSLSWGDRRRGIGPHVARTWVLDDRIGPAYSVVAVNLSID-----EDDGWADDDGVDYGGGXXXXXGGVGRRRPTHLLVTSHECTY------DYRARVDGP---TPDEILIGGSXXXXXXXXXXXXXXXXXXXXXXXLFAYEIP---AKWKVYPRVYPSPGWRRHTIASGFRVRGL---GINPGAPGFVYTFHPHR--SMRGKTRPHIALAGDCSQAAYVLRP-RVRDGGSDSSGSDGASGSSCLDYELAARIDCGGTVGSLAVAYGPLTGASAMEDDSVAKIFVPSYDMNKV 858
            T +V  ++FF + + +HS+     RRG  P V  T  +DDR G A+S + V+L  +     +D   +  D      G        G    +HLLVTSHEC+Y         +  DG    TP +   GGS                       LFAY +P     WK  P       W R T+A+GF+V G     INPGAPGFVY+FH  +  +  GK RP IA+AGDC++AAY+ RP  + D  S+       S      Y+L   I CG TVGS+ ++Y   T  +A ++   AK+++P Y+ +KV
Sbjct:  428 TIEVISSQFFSKSVALHSI-----RRGPEPKVCFTRSIDDRCGTAFSSILVDLDCNAVGTKKDAQASKQDRCVINSGSSFESLSRGDCF-SHLLVTSHECSYVEPGEMPSSSSADGSALWTPADDTDGGS-----------------------LFAYRVPEGKGSWKTNP-------WLRTTVATGFKVHGQINNMINPGAPGFVYSFHAKKDDTYSGK-RPMIAIAGDCAEAAYIYRPDNIVDTRSE------ISADPSTQYKLMVEIQCGSTVGSIGISYDDFT--TAEQESGYAKLYIPCYENDKV 691          
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Match: D7FTN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN5_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 2.660e-30
Identity = 88/256 (34.38%), Postives = 103/256 (40.23%), Query Frame = 1
Query:    1 TSKVFCAEFFGRRLTMHSLSWGDRRRGIGPHVARTWVLDDRIGPAYSVVAVNLSIDEDDGWADDDGVDYGGGXXXXXGGVGRRRPTHLLVTSHECTYD--------------------------------------YRARVDGPTPDEILI----------------------GG--SXXXXXXXXXXXXXXXXXXXXXXXLFAYEIPAKWKVYPRVYPSPGWRRHTIASGFRVRGLGINPGAPGFVYTFHPHRSM 582
            T +V CAEFFG R+TMHSL  G +  G  P V  +WVLDD  GPAYS+ A +L                        GG    RPTH LVT HE +Y+                                        +R  G  PD   I                      GG  +                       L AYEIP  W++ PR YP+PGW R T+ASGFRVRG+ INPG PGF Y FHPHRSM
Sbjct:  487 TVQVICAEFFGGRVTMHSLWGGGQLPGSQPSVTESWVLDDNAGPAYSITAADLR-----------------------GGSPGGRPTHFLVTVHESSYNTYSLFAAAGGIGGXXXXXXXXXXXXXXXXXXXXXXXXXXGSRHAGVEPDPAGIEAEKAAFKVPPEGTSRWGAGRWGGVVAGGPKERRWQRREEGRGSGGAGGSLVAYEIPEDWRMLPRFYPAPGWLRATLASGFRVRGISINPGTPGFPYLFHPHRSM 719          
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Match: B5YLS4_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLS4_THAPS)

HSP 1 Score: 129 bits (325), Expect = 4.080e-30
Identity = 108/308 (35.06%), Postives = 143/308 (46.43%), Query Frame = 1
Query:    1 TSKVFCAEFFGRRLTMHSLSWGDRRRGIGPHVARTWVLDDRIGPAYSVVAVNLSIDEDDGWA-------DDDGVDYGGGXXXXXGGVGRRRPTHLLVTSHECTYDYRARVDGPTP-----DEILIGGSXXXXXXXXXXXXXXXXXXXXXXXLFAYEIPA---KWKVYPRVYPSPGWRRHTIASGFRVRGL---GINPGAPGFVYTFHPHR---SMRGK-TRPHIALAGDCSQAAYVLRPRVRDGGSDSSGSDGASGSSCLDYELAARIDCGGTVGSLAVAYGPLTGASAMEDDSVAKIFVPSYDMNKV 858
            T +V  ++FF R+L++HS+     +RG  P V    V+DDR G A+S +  +L     DG A           VD G        G      +HLLVTSHEC+Y   +  +   P      +I +G +                       LFAY +PA    WK  P       W R  IA+GF+V+      INPGAPGF YTF P R   S R K +RP I L+GDC+++AY+LRP + D       S    G     Y L   I C  TVGSLA+ Y      SA +    AKI+VP Y+ +KV
Sbjct:  530 TVEVIASQFFSRKLSLHSI-----KRGPEPKVVFQRVIDDRCGAAFSSLLADL-----DGLATMQQSEQQPTVVDNGSTVISLKNGDAF---SHLLVTSHECSYAESSGQNELEPATDFDGDITVGSTATLQPDQTKIDGGS---------LFAYRVPAGINAWKTKP-------WTRSVIATGFKVQSQLSNMINPGAPGFCYTFFPTRDGGSKRRKWSRPLIGLSGDCAESAYILRP-IED-------SPDTDGDRSTKYSLMCEIQCKATVGSLAIGYDDFY-QSAEQQSGYAKIYVPCYEQDKV 799          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16590.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJ47_9STRA8.190e-7951.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KJ55_9PHAE4.750e-5037.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9DCX2_9STRA4.480e-4435.71Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S4DAE7_HETAK1.690e-3740.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5K689_FISSO1.010e-3535.03Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S1G010_9STRA2.900e-3136.00Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
K0RTF0_THAOC8.090e-3135.91Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B7FQ82_PHATC1.890e-3033.98Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
D7FTN5_ECTSI2.660e-3034.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B5YLS4_THAPS4.080e-3035.06Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16590contigP-wetherbeei_contig16590:141..1427 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog159749.K0RTF0
Model size858
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.33e-31
EggNOG OGs2AV1E@1|root,2RZVB@2759|Eukaryota,2XAYT@2836|Bacillariophyta
Cds size858
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186091.607953-CDS-P-wetherbeei_contig16590:140..3831683186091.607953-CDS-P-wetherbeei_contig16590:140..383Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16590 141..383 +
1683186091.6162584-CDS-P-wetherbeei_contig16590:551..8831683186091.6162584-CDS-P-wetherbeei_contig16590:551..883Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16590 552..883 +
1683186091.6238825-CDS-P-wetherbeei_contig16590:1084..13021683186091.6238825-CDS-P-wetherbeei_contig16590:1084..1302Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16590 1085..1302 +
1683186091.6334724-CDS-P-wetherbeei_contig16590:1362..14271683186091.6334724-CDS-P-wetherbeei_contig16590:1362..1427Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16590 1363..1427 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16590.1.1prot_P-wetherbeei_contig16590.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16590 141..1427 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16590.1.1

>prot_P-wetherbeei_contig16590.1.1 ID=prot_P-wetherbeei_contig16590.1.1|Name=mRNA_P-wetherbeei_contig16590.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp
TSKVFCAEFFGRRLTMHSLSWGDRRRGIGPHVARTWVLDDRIGPAYSVVA
VNLSIDEDDGWADDDGVDYGGGGGGGVGGVGRRRPTHLLVTSHECTYDYR
ARVDGPTPDEILIGGSGGGGGGSSDGGKGGSGGNGGGGGLFAYEIPAKWK
VYPRVYPSPGWRRHTIASGFRVRGLGINPGAPGFVYTFHPHRSMRGKTRP
HIALAGDCSQAAYVLRPRVRDGGSDSSGSDGASGSSCLDYELAARIDCGG
TVGSLAVAYGPLTGASAMEDDSVAKIFVPSYDMNKV
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mRNA from alignment at P-wetherbeei_contig16590:141..1427+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16590.1.1 ID=mRNA_P-wetherbeei_contig16590.1.1|Name=mRNA_P-wetherbeei_contig16590.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1287bp|location=Sequence derived from alignment at P-wetherbeei_contig16590:141..1427+ (Phaeothamnion wetherbeei SAG_119_79)
ACATCGAAGGTCTTTTGCGCGGAGTTTTTCGGGCGGCGGCTGACGATGCA CTCGCTGAGCTGGGGCGACCGCCGCCGCGGCATCGGCCCGCACGTCGCGC GCACGTGGGTTTTGGATGATCGCATTGGCCCCGCCTACAGCGTCGTCGCT GTCAATCTCAGCATCGACGAAGATGATGGTTGGGCTGACGACGATGGCGT CGACTACGGCGGCGGCGGCGGCGGCGGCGTCGGCGGCGTCGGCGTGAGTG GCGACAGCGGCGATAGTCGCAGCGGCGTGGGCGTGGGCGGCGGTGTCGAT AGCATGGGAGGCGCGTGGGGCGTCGGCTTTGGCATTGCGGCCCACGTTGC CTCCGGCACCGGCGCCAGAGGCCCGGCTGTCGCGGGCGCCGCCGATGCGG TCGGGCGGCAGCGGCGGCGGCCGACGCACCTCCTGGTTACGTCGCACGAG TGCACGTACGATTACCGCGCACGGGTGGATGGCCCGACTCCCGATGAGAT TCTCATCGGCGGCAGCGGCGGCGGCGGCGGCGGAAGTAGCGATGGCGGCA AAGGCGGCAGCGGCGGCAATGGCGGCGGCGGCGGCCTTTTTGCCTATGAA ATTCCAGCTAAGTGGAAAGTGTACCCTCGCGTCTACCCGAGTCCCGGCTG GCGGCGGCACACCATCGCCAGCGGCTTCCGCGTGCGCGGGCTTGGCATCA ATCCGGGGGCTCCGGGGTTCGTGTACACCTTCCACCCTCATCGGTAAGTC AGACCCCGCGCGCAGTTGCAGGGAACTTGGTTGCGTTTCTGCTCCTTTCC TGAGATCTGTGCAACAACTGTCTTTGGTATGTTTCGGAGCATTCATGTAA ATGTTTGGTCTTTGATTTTGTTCTCTTTCCATGGTATGCTATTTCGGTGA CTGAAAGCTGACCACGATACATGCTGGTTTTTCTCCCCTTACAGGTCGAT GCGTGGTAAGACACGGCCGCACATCGCCTTGGCGGGCGACTGCTCGCAGG CGGCTTATGTGCTCAGACCGCGCGTTAGGGACGGCGGTTCTGACAGCAGC GGATCTGACGGTGCTTCGGGGTCATCGTGCCTTGACTATGAATTGGCTGC GCGCATCGACTGTGGAGGGACTGTCGGTTCCCTCGCTGTCGCGTATGGGC CCTTGACTGGCGGTGGCAGCTCTGTCGGTAACAATGGCGGCGGCATCTGG GGAGACGTATCGGCGGCGGGAGCGTCGGCGATGGAGGATGACAGCGTGGC GAAGATCTTTGTCCCGAGCTACGACATGAACAAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16590:141..1427+

>mRNA_P-wetherbeei_contig16590.1.1 ID=mRNA_P-wetherbeei_contig16590.1.1|Name=mRNA_P-wetherbeei_contig16590.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig16590:141..1427+ (Phaeothamnion wetherbeei SAG_119_79)
ACATCGAAGGTCTTTTGCGCGGAGTTTTTCGGGCGGCGGCTGACGATGCA
CTCGCTGAGCTGGGGCGACCGCCGCCGCGGCATCGGCCCGCACGTCGCGC
GCACGTGGGTTTTGGATGATCGCATTGGCCCCGCCTACAGCGTCGTCGCT
GTCAATCTCAGCATCGACGAAGATGATGGTTGGGCTGACGACGATGGCGT
CGACTACGGCGGCGGCGGCGGCGGCGGCGTCGGCGGCGTCGGCCGGCGGC
GGCCGACGCACCTCCTGGTTACGTCGCACGAGTGCACGTACGATTACCGC
GCACGGGTGGATGGCCCGACTCCCGATGAGATTCTCATCGGCGGCAGCGG
CGGCGGCGGCGGCGGAAGTAGCGATGGCGGCAAAGGCGGCAGCGGCGGCA
ATGGCGGCGGCGGCGGCCTTTTTGCCTATGAAATTCCAGCTAAGTGGAAA
GTGTACCCTCGCGTCTACCCGAGTCCCGGCTGGCGGCGGCACACCATCGC
CAGCGGCTTCCGCGTGCGCGGGCTTGGCATCAATCCGGGGGCTCCGGGGT
TCGTGTACACCTTCCACCCTCATCGGTCGATGCGTGGTAAGACACGGCCG
CACATCGCCTTGGCGGGCGACTGCTCGCAGGCGGCTTATGTGCTCAGACC
GCGCGTTAGGGACGGCGGTTCTGACAGCAGCGGATCTGACGGTGCTTCGG
GGTCATCGTGCCTTGACTATGAATTGGCTGCGCGCATCGACTGTGGAGGG
ACTGTCGGTTCCCTCGCTGTCGCGTATGGGCCCTTGACTGGCGCGTCGGC
GATGGAGGATGACAGCGTGGCGAAGATCTTTGTCCCGAGCTACGACATGA
ACAAGGTG
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