mRNA_P-wetherbeei_contig16338.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Match: D7FRF3_ECTSI (Multifunctional pyrimidine synthesis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF3_ECTSI) HSP 1 Score: 214 bits (544), Expect = 3.670e-60 Identity = 113/127 (88.98%), Postives = 116/127 (91.34%), Query Frame = 1
Query: 1 VLVRPSFVLSGAAMAVASNPRELSAFLVCAGAVAQDKPVVLSKFILNAKEIEFDGVARGGDILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKENEIK 381
VLVRPSFVLSGAAMAVASN EL FL AG AQDKPVV+SKFILNAKEIEFDGVA+ G ILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKE +IK
Sbjct: 944 VLVRPSFVLSGAAMAVASNHTELEKFLSAAGDAAQDKPVVVSKFILNAKEIEFDGVAQDGRILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKEQDIK 1070
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Match: A0A836CIG0_9STRA (Multifunctional pyrimidine synthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIG0_9STRA) HSP 1 Score: 209 bits (533), Expect = 1.120e-58 Identity = 109/126 (86.51%), Postives = 117/126 (92.86%), Query Frame = 1
Query: 4 LVRPSFVLSGAAMAVASNPRELSAFLVCAGAVAQDKPVVLSKFILNAKEIEFDGVARGGDILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKENEIK 381
LVRPSFVLSGAAMAVAS +EL+ FL AG VA DKPVV+SKFI AKEIEFDGV++GG+I+NYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMA+ENEIK
Sbjct: 1061 LVRPSFVLSGAAMAVASTAKELADFLRNAGEVANDKPVVISKFIEGAKEIEFDGVSQGGNIINYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMARENEIK 1186
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Match: W7U0U1_9STRA (Cad protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0U1_9STRA) HSP 1 Score: 197 bits (501), Expect = 2.230e-54 Identity = 100/127 (78.74%), Postives = 117/127 (92.13%), Query Frame = 1
Query: 1 VLVRPSFVLSGAAMAVASNPRELSAFLVCAGAVAQDKPVVLSKFILNAKEIEFDGVARGGDILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKENEIK 381
VLVRPSFVLSGAAM VA+ PR+L +FL A V++DKPVV++KFILNAKEIEFD VA+ GDILNYAISEHVENAGVHSGDATL+LPAQKL+VETIR+VKR++SAI KALNI+GPFNIQLMAK+N++K
Sbjct: 1177 VLVRPSFVLSGAAMNVAATPRQLESFLQEAADVSKDKPVVVTKFILNAKEIEFDAVAKAGDILNYAISEHVENAGVHSGDATLVLPAQKLFVETIRKVKRISSAIAKALNITGPFNIQLMAKDNDVK 1303
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Match: A0A6H5K3T3_9PHAE (CbamoylP_synth_lsu-like_ATP-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T3_9PHAE) HSP 1 Score: 179 bits (453), Expect = 5.950e-53 Identity = 91/103 (88.35%), Postives = 96/103 (93.20%), Query Frame = 1
Query: 76 FLVCAGAVAQDKPVVLSKFILNAKEIEFDGVARGGDILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKENEIKA 384
+L AG AQDKPVV+SKFILNAKEIEFDGVA+ G ILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKAL+ISGPFNIQLMAKE +IKA
Sbjct: 109 YLSAAGDAAQDKPVVVSKFILNAKEIEFDGVAQDGRILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALSISGPFNIQLMAKEQDIKA 211
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Match: A0A7J6M3Z6_PERCH (CbamoylP_synth_lsu-like_ATP-bd domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6M3Z6_PERCH) HSP 1 Score: 173 bits (438), Expect = 1.810e-51 Identity = 87/126 (69.05%), Postives = 102/126 (80.95%), Query Frame = 1
Query: 1 VLVRPSFVLSGAAMAVASNPRELSAFLVCAGAVAQDKPVVLSKFILNAKEIEFDGVARGGDILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKENEI 378
VLVRPS+VLSGAAM + EL FL A VAQD PVV+SK+I NAKE+E D V G+I+NYAISEHV+NAGVHSGDAT+LLPAQKL+VET RR+K+V+ +CKALNISGPFNIQ M KENE+
Sbjct: 33 VLVRPSYVLSGAAMRCVYDDEELERFLKTAAVVAQDHPVVVSKYIENAKEVEMDAVGCAGEIVNYAISEHVQNAGVHSGDATILLPAQKLYVETHRRIKKVSQKLCKALNISGPFNIQFMCKENEV 158
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Match: U6MC37_EIMMA (Carbamoyl phosphate synthetase II, putative (Fragment) n=1 Tax=Eimeria maxima TaxID=5804 RepID=U6MC37_EIMMA) HSP 1 Score: 176 bits (447), Expect = 1.380e-49 Identity = 87/127 (68.50%), Postives = 104/127 (81.89%), Query Frame = 1
Query: 1 VLVRPSFVLSGAAMAVASNPRELSAFLVCAGAVAQDKPVVLSKFILNAKEIEFDGVARGGDILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKENEIK 381
VLVRPS+VLSGAAM V N ++L FL A V+ D PVV+SKFI NAKE+EFD VA G+ILNYAISEHVENAG HSGDATL+LPAQKL+VETIRRV+++A + +ALN+SGPFNIQ + K NE+K
Sbjct: 5 VLVRPSYVLSGAAMRVVMNDQQLKEFLQVAAVVSGDSPVVISKFISNAKEVEFDSVAHNGEILNYAISEHVENAGTHSGDATLILPAQKLYVETIRRVQKIAQRLARALNVSGPFNIQFICKNNEVK 131
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Match: A0A7S1GHT2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GHT2_CYCTE) HSP 1 Score: 177 bits (450), Expect = 4.450e-49 Identity = 91/127 (71.65%), Postives = 107/127 (84.25%), Query Frame = 1
Query: 1 VLVRPSFVLSGAAMAVASNPRELSAFLVCAGAVAQDKPVVLSKFILNAKEIEFDGVARGGDILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKENEIK 381
VLVRPSFVLSGAAM VA+N +L FL A VA DKPVV++KFI+NAKEIEFD +A+ G ILNYAI EH+ENAGVHSGDAT++LPAQKL+V TIR+VKR ASAI KAL I+GPFNIQ MAK N+++
Sbjct: 172 VLVRPSFVLSGAAMRVAANESQLRNFLGLAAEVAADKPVVVTKFIVNAKEIEFDAIAKNGTILNYAIGEHLENAGVHSGDATVILPAQKLYVNTIRQVKRYASAIAKALRITGPFNIQFMAKGNDVQ 298
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Match: F0YIC1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIC1_AURAN) HSP 1 Score: 179 bits (453), Expect = 6.120e-48 Identity = 92/127 (72.44%), Postives = 110/127 (86.61%), Query Frame = 1
Query: 1 VLVRPSFVLSGAAMAVASNPRELSAFLVCAGAVAQDKPVVLSKFILNAKEIEFDGVARGGDILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKENEIK 381
VLVRPSFVLSGAAM VA++ EL+ FL A AV+ D+PVV+SKFI NAKEIEFD V + G +LNYAISEHVENAGVHSGDATL+LPAQKL+V+T ++VKR+A+ I KALNISGP NIQLMA+EN++K
Sbjct: 1137 VLVRPSFVLSGAAMKVATSDAELAQFLGDASAVSPDRPVVVSKFIRNAKEIEFDAVCKEGHVLNYAISEHVENAGVHSGDATLVLPAQKLYVQTQKQVKRIAARIAKALNISGPVNIQLMARENDVK 1263
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Match: A0A7S3DVH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DVH8_9STRA) HSP 1 Score: 172 bits (436), Expect = 8.050e-48 Identity = 90/127 (70.87%), Postives = 104/127 (81.89%), Query Frame = 1
Query: 1 VLVRPSFVLSGAAMAVASNPRELSAFLVCAGAVAQDKPVVLSKFILNAKEIEFDGVARGGDILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKENEIK 381
VLVRPSFVLSGAAM VA++ +L FL A V DKPVV+SKFI+NAKEIEFD VA G ILNYAI EH+ENAGVHSGDAT++LPAQKL+V TIR+VKR AS I KAL I+GPFNIQ MAK N+++
Sbjct: 102 VLVRPSFVLSGAAMRVAADESQLRNFLDLAAEVGNDKPVVVSKFIVNAKEIEFDAVANKGQILNYAIGEHLENAGVHSGDATVILPAQKLYVGTIRQVKRYASQIAKALRITGPFNIQFMAKGNDVQ 228
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Match: A0A7S1TZV2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZV2_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.140e-47 Identity = 93/127 (73.23%), Postives = 107/127 (84.25%), Query Frame = 1
Query: 1 VLVRPSFVLSGAAMAVASNPRELSAFLVCAGAVAQDKPVVLSKFILNAKEIEFDGVARGGDILNYAISEHVENAGVHSGDATLLLPAQKLWVETIRRVKRVASAICKALNISGPFNIQLMAKENEIK 381
VLVRPSFVLSGAAM VA P +LS FL A V+ DKPVV+SKFIL AKEIEFD VA G ILNYAISEHVENAGVHSGDATL+LPAQ+L+V+TIR+VK +A I +ALNI+GPFNIQL+AK+N +K
Sbjct: 1160 VLVRPSFVLSGAAMKVALTPEQLSKFLDNAADVSGDKPVVVSKFILGAKEIEFDAVANNGKILNYAISEHVENAGVHSGDATLVLPAQRLYVQTIRQVKLIAGKIAQALNITGPFNIQLLAKDNYVK 1286 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16338.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16338.1.1 >prot_P-wetherbeei_contig16338.1.1 ID=prot_P-wetherbeei_contig16338.1.1|Name=mRNA_P-wetherbeei_contig16338.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp MRRCCCPHRSCGWRQSGGSSGWHQPSARPSTSRAPSTSSSWPRRTRSRHIback to top mRNA from alignment at P-wetherbeei_contig16338:66..1525- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16338.1.1 ID=mRNA_P-wetherbeei_contig16338.1.1|Name=mRNA_P-wetherbeei_contig16338.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1460bp|location=Sequence derived from alignment at P-wetherbeei_contig16338:66..1525- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16338:66..1525- >mRNA_P-wetherbeei_contig16338.1.1 ID=mRNA_P-wetherbeei_contig16338.1.1|Name=mRNA_P-wetherbeei_contig16338.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig16338:66..1525- (Phaeothamnion wetherbeei SAG_119_79)back to top |