mRNA_P-wetherbeei_contig16334.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16334.1.1
Unique NamemRNA_P-wetherbeei_contig16334.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A1F3A8B9_9PROT (ABC transporter ATP-binding protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3A8B9_9PROT)

HSP 1 Score: 436 bits (1121), Expect = 1.500e-153
Identity = 227/248 (91.53%), Postives = 236/248 (95.16%), Query Frame = 1
Query:    1 VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEE 744
            +VEPLL TD+LVKRFGGLVATD VSIDVRPGEIHALIGPNGAGKTTLVSQLTG+LAPDAGTI F GRDVTRLPTHARVRLGLARSFQITSVLREFTAL+NVALAVQAHAGHSFRFLAD R DERLR PAR GLEAVGLGARA+TLAATLSHGEQRQLEIAMALAG PKLLLLDEPMAGMG EESQRMIGFL+ LK KRA+LLIEHDMDAVFQLADRITVLVYGRAIASGTPD+IRANAEVRQAYLG+E
Sbjct:    1 MVEPLLSTDRLVKRFGGLVATDTVSIDVRPGEIHALIGPNGAGKTTLVSQLTGNLAPDAGTIRFDGRDVTRLPTHARVRLGLARSFQITSVLREFTALDNVALAVQAHAGHSFRFLADARYDERLRAPARRGLEAVGLGARADTLAATLSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQRMIGFLQALKGKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDEIRANAEVRQAYLGDE 248          
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A259MM61_9PROT (ABC transporter ATP-binding protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MM61_9PROT)

HSP 1 Score: 415 bits (1066), Expect = 3.240e-145
Identity = 214/248 (86.29%), Postives = 227/248 (91.53%), Query Frame = 1
Query:    1 VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEE 744
            + EPLLRT+ LVKR+GGL+ATD VSIDVRPGEIHALIGPNGAGKTTL+ QLTG +APD+G IHFAGRDVTRLPTHARVRLGL RSFQITSVLREFTALENVALAVQ HAGHSFRFLAD RRDE LRGPAR  LE VGLG RA+TLAA+LSHGEQRQLEIAMALAG P+LLLLDEPMAGMG EESQR+IGFL+ LK   AMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRAN +VRQAYLGEE
Sbjct:    1 MTEPLLRTEGLVKRYGGLLATDNVSIDVRPGEIHALIGPNGAGKTTLIHQLTGVVAPDSGAIHFAGRDVTRLPTHARVRLGLGRSFQITSVLREFTALENVALAVQGHAGHSFRFLADARRDESLRGPARRLLEEVGLGERADTLAASLSHGEQRQLEIAMALAGDPRLLLLDEPMAGMGAEESQRLIGFLQALKQNHAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANPDVRQAYLGEE 248          
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A1H8W5T2_9PROT (Branched-chain amino acid transport system ATP-binding protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8W5T2_9PROT)

HSP 1 Score: 413 bits (1061), Expect = 1.870e-144
Identity = 212/247 (85.83%), Postives = 226/247 (91.50%), Query Frame = 1
Query:    1 VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGE 741
            + EP+L    L+KRFGGL+ATD VSIDVRPGEIHALIGPNGAGKTTLVSQLTG++ PD GTIHFAGRD+T LP HARVRLGLARSFQITSVLREFTAL+NVALAVQAHAGHSFRFLADVRRDE LRGPAR GLE VGL ARA+T AA LSHGEQRQLEIAMALAG P++LLLDEPMAGMG EESQRMIGFL+GLK +R MLLIEHDMDAVFQLADRITVLVYGRAIASGTP +IRANAEVRQAYLGE
Sbjct:    1 MAEPMLAASGLIKRFGGLIATDNVSIDVRPGEIHALIGPNGAGKTTLVSQLTGNMQPDTGTIHFAGRDITHLPMHARVRLGLARSFQITSVLREFTALDNVALAVQAHAGHSFRFLADVRRDESLRGPARRGLEEVGLAARADTPAANLSHGEQRQLEIAMALAGDPRMLLLDEPMAGMGVEESQRMIGFLQGLKDRRGMLLIEHDMDAVFQLADRITVLVYGRAIASGTPAEIRANAEVRQAYLGE 247          
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: UPI001E3D4A59 (ABC transporter ATP-binding protein n=1 Tax=Reyranella aquatilis TaxID=2035356 RepID=UPI001E3D4A59)

HSP 1 Score: 409 bits (1051), Expect = 6.240e-143
Identity = 211/248 (85.08%), Postives = 225/248 (90.73%), Query Frame = 1
Query:    7 EPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEEVA 750
            EPLLRT++LVKR+GGL+ATD VSIDVRPGEIHALIGPNGAGKTTLV QLTG +APD+GTIHFAG D+TRLPTHARVRLGL RSFQITSVLREFTALENVALAVQ HAGHSFRFLAD RRDE LR PAR  L+ VGLGAR   LA+ LSHGEQRQLE+AMALAG P +LLLDEPMAGMG EESQR+IGFLR LK K AMLLIEHDMDAVFQLADRITVLVYGRAIASGTP +IRANAEVRQAYLGEE+A
Sbjct:    3 EPLLRTERLVKRYGGLLATDNVSIDVRPGEIHALIGPNGAGKTTLVHQLTGVVAPDSGTIHFAGHDITRLPTHARVRLGLGRSFQITSVLREFTALENVALAVQGHAGHSFRFLADARRDETLRAPARRLLDEVGLGARGSVLASALSHGEQRQLELAMALAGDPTVLLLDEPMAGMGVEESQRLIGFLRALKQKHAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPGEIRANAEVRQAYLGEEMA 250          
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A521QHV5_9HYPH (ABC transporter ATP-binding protein n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QHV5_9HYPH)

HSP 1 Score: 407 bits (1046), Expect = 4.470e-142
Identity = 211/246 (85.77%), Postives = 223/246 (90.65%), Query Frame = 1
Query:    7 EPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEE 744
            +PLL TD+LVKRFGGL+ATD VSIDV PGEIHALIGPNGAGKTTLV QLTG++ PD+GTI FAG+D+TRLPTH RV LGLARSFQITSVLREFTALENVALAVQAH GHSFRFLAD R DE LRGPAR GLE VGLG RA TLAA LSHGEQRQLEIAMALAG P LLLLDEPMAGMG EESQRMIGFLR LKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTP +IRAN +VRQAYLG++
Sbjct:    7 QPLLSTDRLVKRFGGLLATDNVSIDVVPGEIHALIGPNGAGKTTLVGQLTGNVTPDSGTIRFAGQDITRLPTHKRVHLGLARSFQITSVLREFTALENVALAVQAHVGHSFRFLADARNDESLRGPARRGLEEVGLGDRANTLAAALSHGEQRQLEIAMALAGDPSLLLLDEPMAGMGVEESQRMIGFLRALKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPAEIRANKDVRQAYLGDD 252          
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A1T4RLQ5_9HYPH (Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4RLQ5_9HYPH)

HSP 1 Score: 399 bits (1024), Expect = 8.090e-139
Identity = 209/250 (83.60%), Postives = 224/250 (89.60%), Query Frame = 1
Query:    1 VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEEVA 750
            + EPLL    LVKRFGGL+ATD VSI+V PGEIHALIGPNGAGKTTLVSQLTG+L PD+G+I FAGRDVTRLP HARVRLGLARSFQIT+VLR+FTAL+NVALAVQAH GHSFRFLADVR D RLR  AR GLEAVGL ARAETLA+ LSHGEQRQLEIAMALAG P+LLLLDEPMAGMG EESQR++G LR LKS+  MLLIEHDMDAVF LADRITVLVYGRAIASGTPDQIR NA+VRQAYLGEEVA
Sbjct:    1 MAEPLLSAQGLVKRFGGLLATDNVSIEVMPGEIHALIGPNGAGKTTLVSQLTGNLRPDSGSIRFAGRDVTRLPLHARVRLGLARSFQITAVLRDFTALDNVALAVQAHDGHSFRFLADVRADRRLRDSARRGLEAVGLQARAETLASALSHGEQRQLEIAMALAGEPRLLLLDEPMAGMGPEESQRLVGMLRNLKSRCGMLLIEHDMDAVFALADRITVLVYGRAIASGTPDQIRGNAQVRQAYLGEEVA 250          
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A521L1E4_9HYPH (ABC transporter ATP-binding protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521L1E4_9HYPH)

HSP 1 Score: 398 bits (1023), Expect = 1.150e-138
Identity = 209/247 (84.62%), Postives = 220/247 (89.07%), Query Frame = 1
Query:   10 PLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEEVA 750
            PLL TD+LVKR+GGLVATD VSIDV PGEIHALIGPNGAGKTTLV QLTG++ PD+GTI FAG DVTRL THARV LGLARSFQITSVLREFTALENVALAVQAHAGHSFRFL D R DE LRGPAR  LE VGLG+RA+  AA LSHGEQRQLEIAMALAG P+LLLLDEPMAGMG EESQRMIGFLR LK +RAMLLIEHDMDAVFQLADRITVLVYGRAIASG P +IRAN +VRQAYLGEE A
Sbjct:    4 PLLSTDRLVKRYGGLVATDNVSIDVVPGEIHALIGPNGAGKTTLVGQLTGNVTPDSGTIRFAGHDVTRLKTHARVALGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLRDARSDESLRGPARTLLEEVGLGSRADAPAAALSHGEQRQLEIAMALAGDPQLLLLDEPMAGMGAEESQRMIGFLRALKGRRAMLLIEHDMDAVFQLADRITVLVYGRAIASGPPAEIRANPDVRQAYLGEETA 250          
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A537MS68_9PROT (ABC transporter ATP-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MS68_9PROT)

HSP 1 Score: 384 bits (985), Expect = 7.030e-133
Identity = 203/250 (81.20%), Postives = 217/250 (86.80%), Query Frame = 1
Query:    1 VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEEVA 750
            +VEPLL TD+LVK FGGL+ATD VSIDVRPGEIHALIGPNGAGKTTLV QLTG LAPD+GTI FAGRD+TRLPTHARVRLGL RSFQITSVLREF+AL+NVALAVQAH GHSFRFLADVRRD  LR  A+ GL+AVGLGARA   AA LSHGEQRQLEIAMALAG PKLLLLDEP AGMG EESQRM+  LRGLK    MLLIEHDMDAVF LADRITVLVYGR +  GTPD+IR + EVRQAYLGE+ A
Sbjct:    1 MVEPLLSTDRLVKHFGGLLATDDVSIDVRPGEIHALIGPNGAGKTTLVGQLTGLLAPDSGTIRFAGRDITRLPTHARVRLGLGRSFQITSVLREFSALDNVALAVQAHQGHSFRFLADVRRDRALRTAAQGGLDAVGLGARAAMPAAALSHGEQRQLEIAMALAGEPKLLLLDEPTAGMGVEESQRMVETLRGLKRSCGMLLIEHDMDAVFALADRITVLVYGRVLFCGTPDEIRRHPEVRQAYLGEDGA 250          
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A1Q3KQ47_9PROT (ABC transporter ATP-binding protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KQ47_9PROT)

HSP 1 Score: 381 bits (979), Expect = 6.180e-132
Identity = 201/245 (82.04%), Postives = 216/245 (88.16%), Query Frame = 1
Query:   10 PLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEE 744
            PLL TD+LVKR+GGL+ATD VSIDV  GEIHALIGPNGAGKTTLV QLTG++APD+GTI FAG+D+TRLPTH RV LGLARSFQITSVL EFTALENVALAVQAHAGHSFRFL DVR DE LRGPAR  LE VGL ARA   A+ LSHGEQRQLEIAMALAG P LLLLDEPMAGMG EESQRMI FLR LK +RAMLLIEHDMDAVFQLADRITVLVYGRAIASGTP +IRA+  VR+AYLG++
Sbjct:    4 PLLSTDRLVKRYGGLLATDNVSIDVASGEIHALIGPNGAGKTTLVGQLTGNVAPDSGTIRFAGQDITRLPTHRRVHLGLARSFQITSVLGEFTALENVALAVQAHAGHSFRFLRDVRGDESLRGPARHCLEEVGLDARAGMPASALSHGEQRQLEIAMALAGDPSLLLLDEPMAGMGVEESQRMIAFLRALKGRRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPAEIRADEAVRRAYLGDD 248          
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A5C5SA16_9HYPH (ABC transporter ATP-binding protein n=2 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5SA16_9HYPH)

HSP 1 Score: 343 bits (880), Expect = 6.070e-117
Identity = 180/243 (74.07%), Postives = 201/243 (82.72%), Query Frame = 1
Query:   13 LLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGE 741
            +L+ + LVKRFGGLVATD +S+DVR GE+HALIGPNGAGKTTL++QL+G L PDAG I F  RD+T LP  ARVRLGLARSFQITSVLR+FTAL+NVALA QA  GHSFRF    R D  LRGPA   LEAVGL  RA+  AA+LSHGEQRQLE+AMALA  P+LLLLDEPMAGMG EES RM+  LRGL+ +R MLLIEHDMDAVF LADRITVLVYGRAIA+GTP +IRAN EVR AYLGE
Sbjct:    1 MLKVEGLVKRFGGLVATDNLSLDVRDGEVHALIGPNGAGKTTLIAQLSGFLRPDAGRITFTDRDITALPAAARVRLGLARSFQITSVLRDFTALDNVALAEQARQGHSFRFWQPARSDRSLRGPASAALEAVGLAHRADDPAASLSHGEQRQLEVAMALACDPRLLLLDEPMAGMGPEESARMVDLLRGLRGQRTMLLIEHDMDAVFALADRITVLVYGRAIATGTPAEIRANPEVRTAYLGE 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F3A8B9_9PROT1.500e-15391.53ABC transporter ATP-binding protein n=2 Tax=Alphap... [more]
A0A259MM61_9PROT3.240e-14586.29ABC transporter ATP-binding protein n=4 Tax=Alphap... [more]
A0A1H8W5T2_9PROT1.870e-14485.83Branched-chain amino acid transport system ATP-bin... [more]
UPI001E3D4A596.240e-14385.08ABC transporter ATP-binding protein n=1 Tax=Reyran... [more]
A0A521QHV5_9HYPH4.470e-14285.77ABC transporter ATP-binding protein n=2 Tax=Reyran... [more]
A0A1T4RLQ5_9HYPH8.090e-13983.60Branched-chain amino acid transport system ATP-bin... [more]
A0A521L1E4_9HYPH1.150e-13884.62ABC transporter ATP-binding protein n=1 Tax=Reyran... [more]
A0A537MS68_9PROT7.030e-13381.20ABC transporter ATP-binding protein n=1 Tax=Alphap... [more]
A0A1Q3KQ47_9PROT6.180e-13282.04ABC transporter ATP-binding protein n=1 Tax=Alphap... [more]
A0A5C5SA16_9HYPH6.070e-11774.07ABC transporter ATP-binding protein n=2 Tax=Reyran... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16334contigP-wetherbeei_contig16334:65..817 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1205680.CAKO01000002_gene2985
PFAMsABC_tran,BCA_ABC_TP_C
Model size753
Max annot lvl204441|Rhodospirillales
KEGG koko:K01995
KEGG TC3.A.1.4
KEGG Pathwayko02010,ko02024,map02010,map02024
KEGG ModuleM00237
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.27e-141
EggNOG OGsCOG0411@1|root,COG0411@2|Bacteria,1MXHT@1224|Proteobacteria,2TSWS@28211|Alphaproteobacteria,2JQJ2@204441|Rhodospirillales
DescriptionCOG0411 ABC-type branched-chain amino acid transport systems, ATPase component
Cds size753
COG categoryE
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186083.7386544-CDS-P-wetherbeei_contig16334:64..8171683186083.7386544-CDS-P-wetherbeei_contig16334:64..817Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16334 65..817 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16334.1.1prot_P-wetherbeei_contig16334.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16334 65..817 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16334.1.1

>prot_P-wetherbeei_contig16334.1.1 ID=prot_P-wetherbeei_contig16334.1.1|Name=mRNA_P-wetherbeei_contig16334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQ
LTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALEN
VALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLS
HGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAM
LLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEEVA
*
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mRNA from alignment at P-wetherbeei_contig16334:65..817-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16334.1.1 ID=mRNA_P-wetherbeei_contig16334.1.1|Name=mRNA_P-wetherbeei_contig16334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig16334:65..817- (Phaeothamnion wetherbeei SAG_119_79)
GTGGTTGAACCCCTCCTCCGCACCGACAAGCTGGTAAAGCGCTTCGGCGG GCTGGTCGCCACCGACATGGTCTCGATCGATGTACGGCCGGGCGAGATCC ATGCCCTGATCGGTCCCAACGGCGCCGGCAAGACCACGCTGGTGAGCCAG CTCACCGGCAGCCTGGCGCCCGATGCCGGCACCATCCACTTCGCCGGCCG CGATGTGACTCGCCTGCCGACCCACGCCCGCGTCCGGCTGGGGTTGGCGC GCTCCTTCCAGATCACCTCGGTGCTGCGCGAGTTCACCGCCCTGGAGAAT GTGGCGCTGGCCGTCCAGGCGCATGCCGGCCACTCGTTCCGGTTCCTGGC CGACGTGCGCCGCGACGAGCGCCTGCGTGGTCCCGCCCGTCTTGGCCTCG AGGCGGTGGGGCTGGGCGCGCGCGCCGAGACACTCGCAGCCACTCTCAGC CATGGCGAGCAGCGCCAGCTCGAGATCGCCATGGCGCTGGCGGGCGGTCC GAAACTGCTGCTGCTCGACGAGCCGATGGCCGGCATGGGCGGTGAGGAAT CGCAGCGCATGATCGGCTTCCTGCGCGGGCTCAAGTCCAAGCGCGCCATG CTCCTGATCGAGCACGACATGGACGCCGTGTTCCAGCTCGCCGACCGCAT CACCGTGCTGGTCTATGGCCGCGCCATTGCGAGCGGCACGCCCGACCAGA TCCGCGCCAATGCCGAGGTCCGGCAGGCCTATCTCGGCGAGGAGGTCGCC TGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16334:65..817-

>mRNA_P-wetherbeei_contig16334.1.1 ID=mRNA_P-wetherbeei_contig16334.1.1|Name=mRNA_P-wetherbeei_contig16334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig16334:65..817- (Phaeothamnion wetherbeei SAG_119_79)
GTGGTTGAACCCCTCCTCCGCACCGACAAGCTGGTAAAGCGCTTCGGCGG
GCTGGTCGCCACCGACATGGTCTCGATCGATGTACGGCCGGGCGAGATCC
ATGCCCTGATCGGTCCCAACGGCGCCGGCAAGACCACGCTGGTGAGCCAG
CTCACCGGCAGCCTGGCGCCCGATGCCGGCACCATCCACTTCGCCGGCCG
CGATGTGACTCGCCTGCCGACCCACGCCCGCGTCCGGCTGGGGTTGGCGC
GCTCCTTCCAGATCACCTCGGTGCTGCGCGAGTTCACCGCCCTGGAGAAT
GTGGCGCTGGCCGTCCAGGCGCATGCCGGCCACTCGTTCCGGTTCCTGGC
CGACGTGCGCCGCGACGAGCGCCTGCGTGGTCCCGCCCGTCTTGGCCTCG
AGGCGGTGGGGCTGGGCGCGCGCGCCGAGACACTCGCAGCCACTCTCAGC
CATGGCGAGCAGCGCCAGCTCGAGATCGCCATGGCGCTGGCGGGCGGTCC
GAAACTGCTGCTGCTCGACGAGCCGATGGCCGGCATGGGCGGTGAGGAAT
CGCAGCGCATGATCGGCTTCCTGCGCGGGCTCAAGTCCAAGCGCGCCATG
CTCCTGATCGAGCACGACATGGACGCCGTGTTCCAGCTCGCCGACCGCAT
CACCGTGCTGGTCTATGGCCGCGCCATTGCGAGCGGCACGCCCGACCAGA
TCCGCGCCAATGCCGAGGTCCGGCAGGCCTATCTCGGCGAGGAGGTCGCC
TGA
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