mRNA_P-wetherbeei_contig16224.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16224.1.1
Unique NamemRNA_P-wetherbeei_contig16224.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Match: A0A7Y6SR45_9BRAD (Helix-turn-helix transcriptional regulator n=1 Tax=Bradyrhizobium sp. 41S5 TaxID=1404443 RepID=A0A7Y6SR45_9BRAD)

HSP 1 Score: 629 bits (1622), Expect = 4.540e-221
Identity = 319/358 (89.11%), Postives = 343/358 (95.81%), Query Frame = 1
Query:    1 MNVQVPTHLLRLARERAGANQTTLAAELGVNASVVSRLESAEQADGKMAQRYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEAFEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTALSFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQIRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTVDHLKNLIDKVDDVDTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSNISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPDLMAQIEDP 1074
            MN Q+PTHLL+LARE+AG NQT LAAELGVNASVVSRLE++E ADGKMA+RYL ALKS+FANEI+AF+SDRWRHIERP+FLHP+RAVLWNAE ALQTLEAFEKS++FDPILQDPLTKLRNRI+ EVDFIR KEHGIAFIGEIGVGKTTALSFVTNLITKS++EE KSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTED+IRRLVTDLV GLK GK+GLPSE+ERVIRSMADLRRVT+RAKKPSEKPTTVDHLKNLIDK  DVDTVIGEVMARMKL+SRTE QMI+SQDTEGSM+WLSSNISKINYGQHPKFSVP RITVLLPLEALR+TPFLISVIDTKGVEGTTQRPDLMAQIEDP
Sbjct:    1 MNGQIPTHLLKLAREKAGVNQTVLAAELGVNASVVSRLEASEHADGKMAERYLVALKSDFANEIIAFYSDRWRHIERPDFLHPDRAVLWNAECALQTLEAFEKSNEFDPILQDPLTKLRNRIVSEVDFIRQKEHGIAFIGEIGVGKTTALSFVTNLITKSKDEETKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDEIRRLVTDLVTGLKHGKSGLPSEIERVIRSMADLRRVTVRAKKPSEKPTTVDHLKNLIDKSADVDTVIGEVMARMKLDSRTENQMIMSQDTEGSMEWLSSNISKINYGQHPKFSVPHRITVLLPLEALRDTPFLISVIDTKGVEGTTQRPDLMAQIEDP 358          
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Match: UPI001658E2A2 (helix-turn-helix domain-containing protein n=1 Tax=Paracoccus amoyensis TaxID=2760093 RepID=UPI001658E2A2)

HSP 1 Score: 562 bits (1449), Expect = 7.310e-195
Identity = 285/357 (79.83%), Postives = 322/357 (90.20%), Query Frame = 1
Query:    1 MNVQVPTHLLRLARERAGANQTTLAAELGVNASVVSRLESAEQADGKMAQRYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEAFEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTALSFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQIRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTVDHLKNLIDKVDDVDTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSNISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPDLMAQIED 1071
            M+ Q+PT +LR+ARE +G NQ  LA ELGV+ASVVSRLE++E+ADGKMA RYL ALK++ ANEI+ FFSD+WRHIERPEF HP R V+W+AERALQTLEAFEK  QFDPIL DPLTKLR+RIL EVDF+RH EHGIAFIGEIGVGKTTALSFVTNLIT   E+ PKS+FPTGSGRTTVCEVAIKIAPAFGIAVDCL E++IR+LV DLVNGLKFGK+GLPSELERVIR+MAD+RRVT RAK  +EK TTVDHLK LID+ DDV++VI EV+ARMKLE+RTE QMILS++TEGSM+WLS+NI KINYGQHPKFSVPQRITVLLPLEALRETP+L+SVIDTKGVEGTTQR DLMAQIED
Sbjct:    1 MDGQIPTSILRMARESSGLNQANLATELGVSASVVSRLETSERADGKMAHRYLTALKTDLANEIIGFFSDKWRHIERPEFQHPQRKVIWDAERALQTLEAFEKGPQFDPILHDPLTKLRSRILSEVDFVRHTEHGIAFIGEIGVGKTTALSFVTNLITADGEK-PKSVFPTGSGRTTVCEVAIKIAPAFGIAVDCLEEEEIRKLVADLVNGLKFGKSGLPSELERVIRNMADVRRVTTRAKTSAEKATTVDHLKELIDQFDDVESVIAEVVARMKLETRTENQMILSKETEGSMEWLSTNIGKINYGQHPKFSVPQRITVLLPLEALRETPYLLSVIDTKGVEGTTQRSDLMAQIED 356          
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Match: A0A4R6YDT2_9HYPH (Helix-turn-helix protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A4R6YDT2_9HYPH)

HSP 1 Score: 493 bits (1268), Expect = 1.730e-167
Identity = 247/357 (69.19%), Postives = 300/357 (84.03%), Query Frame = 1
Query:    1 MNVQVPTHLLRLARERAGANQTTLAAELGVNASVVSRLESAEQADGKMAQRYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEAFEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTALSFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQIRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTVDHLKNLIDKVDDVDTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSNISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPDLMAQIED 1071
            M+ Q+PT L+R+AR+ +   Q  LA++L V+ASV+SRLE++E AD KMA+RYL AL +  A EI+AFF  RWRH++RP+F  P R  +W AE+ LQ L+AFEKS  FDPILQ+PL  LR R+L +VDF+RH EHGIAFIGEIGVGKTTALSFVTNL+    E++  S+FPTGSGR TVCEVAIKIAPA+GIAVD +TED+IR LV+DLVNG+  GK GLPSEL+RVIR+MAD+RRVT+RA+K  EKPTTVDHLK LID++DD D VI EV+ARMKLE+RT TQ+ILS+DTE SM+WLS NIS+INYGQHP+FSVP+RITVLLPL+ALRETP+ +SVIDTKGVEGTTQR DLM +IED
Sbjct:    1 MDDQIPTRLMRMARDESKVRQADLASKLSVSASVLSRLEASETADAKMAKRYLEALDTSLAKEIIAFFERRWRHLDRPDFRLPEREAIWAAEQGLQKLDAFEKSGDFDPILQNPLNNLRKRLLADVDFVRHTEHGIAFIGEIGVGKTTALSFVTNLLVPDGEKKT-SVFPTGSGRMTVCEVAIKIAPAYGIAVDSMTEDEIRMLVSDLVNGIATGKGGLPSELDRVIRNMADVRRVTVRARKAGEKPTTVDHLKELIDRMDDADAVIAEVVARMKLETRTSTQIILSKDTEDSMEWLSKNISRINYGQHPEFSVPERITVLLPLDALRETPYALSVIDTKGVEGTTQRADLMRRIED 356          
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Match: UPI001E5F8862 (helix-turn-helix domain-containing protein n=1 Tax=Janthinobacterium sp. FW305-129 TaxID=2775054 RepID=UPI001E5F8862)

HSP 1 Score: 481 bits (1239), Expect = 4.390e-163
Identity = 238/354 (67.23%), Postives = 301/354 (85.03%), Query Frame = 1
Query:   10 QVPTHLLRLARERAGANQTTLAAELGVNASVVSRLESAEQADGKMAQRYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEAFEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTALSFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQIRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTVDHLKNLIDKVDDVDTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSNISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPDLMAQIED 1071
            Q+PT++L++ARE+A  +QT LA  LGV+AS+VSRLES E AD KMA+RYL+A+K++ A EIV ++ +RWR IE+P F H  R V+++AE+ALQ+L+ FE S QFD ILQDPL+KLRNRI+ E +F+RH+EHGIAFIG+IGVGKTTALSFVTNLI   +  +P+S+FPTGSGRTTVCEVAIKIAPAFGI+V+ LTE+ IR LV+DLV GLK GK+GLPSELERVIR+MADLRR  +R K   EK   +D L++++D  DD+D VI +V+++MKL++RTE QMILS+ TEGS++WL+SNI+KINYGQHP FSVPQRITVLLPL+ALRETP+L+SVIDTKGVEGTTQR DL AQ++D
Sbjct:    4 QIPTNVLKMAREKAALSQTELAGRLGVSASIVSRLESTEFADCKMAERYLSAIKTDLAAEIVEYYGERWRFIEQPPFTHTERKVIFSAEQALQSLDNFENSSQFDAILQDPLSKLRNRIIAETEFVRHREHGIAFIGDIGVGKTTALSFVTNLILTGKGGKPESVFPTGSGRTTVCEVAIKIAPAFGISVESLTEEAIRELVSDLVRGLKTGKSGLPSELERVIRNMADLRRTPVRPKAGLEKAKPIDELRDMVDATDDIDQVIADVLSKMKLDTRTEAQMILSEHTEGSIEWLASNIAKINYGQHPNFSVPQRITVLLPLQALRETPYLLSVIDTKGVEGTTQRSDLKAQVDD 357          
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Match: UPI0014419DD4 (helix-turn-helix domain-containing protein n=2 Tax=Rhizobium TaxID=379 RepID=UPI0014419DD4)

HSP 1 Score: 481 bits (1238), Expect = 5.840e-163
Identity = 242/357 (67.79%), Postives = 293/357 (82.07%), Query Frame = 1
Query:    1 MNVQVPTHLLRLARERAGANQTTLAAELGVNASVVSRLESAEQADGKMAQRYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEAFEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTALSFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQIRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTVDHLKNLIDKVDDVDTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSNISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPDLMAQIED 1071
            M+ Q+PT ++R+AR+ +G  Q  LAA+LGV+ASV+SRLE++E AD KMA+RYL +L +   +EI+ FF  RWRH++RP+F HP +  +W AE ALQ L+ FE+S  FDPIL +PL  LR R+L +VDF+RH EH IAFIGEIGVGKTTALSFVTNL+    E++  S+FPTGSGR TVCEVAIKIAPA+GIAVD + ED+IR LV+DLVNGL  GK GLPSEL+RVIR+MAD+RRV IR++ P EKPTTVDHLK LID+  DVD VI EV+ARMKLE+RT TQ+ILS+DTE SMDWLS NIS+INYGQHP FSVP  ITVLLPLEALRETP+ +SVIDTKGVEGTT+R DLM +IED
Sbjct:    1 MDDQIPTSIMRMARDASGVRQADLAAKLGVSASVLSRLEASENADAKMAKRYLQSLATPLGDEIIEFFERRWRHLDRPDFRHPEKDAIWRAEEALQKLQTFEESKDFDPILHNPLNNLRKRLLSDVDFVRHTEHSIAFIGEIGVGKTTALSFVTNLLVPDGEKKT-SVFPTGSGRMTVCEVAIKIAPAYGIAVDSMKEDEIRMLVSDLVNGLATGKGGLPSELDRVIRNMADVRRVAIRSRTPGEKPTTVDHLKELIDRSGDVDAVIAEVVARMKLETRTSTQIILSRDTEDSMDWLSKNISRINYGQHPDFSVPVLITVLLPLEALRETPYALSVIDTKGVEGTTKRQDLMKRIED 356          
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Match: UPI001C94D4D9 (helix-turn-helix transcriptional regulator n=1 Tax=Rhizobium leguminosarum TaxID=384 RepID=UPI001C94D4D9)

HSP 1 Score: 344 bits (882), Expect = 1.860e-109
Identity = 177/358 (49.44%), Postives = 250/358 (69.83%), Query Frame = 1
Query:    1 MNVQVPTHLLRLARERAGANQTTLAAELGVNASVVSRLESAEQADGKMAQRYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEAFEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTALSFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQIRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTVDHLKNLIDKVDDVDTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSNISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPDLMAQIEDP 1074
            M+  +PT +LR ARE AG  Q++LA+ LG+ ASVVSR+E A+  D  +A RYL A+ S+    I  F+   W   ERP FLHP++  LW  E++LQ L  FE++  FD IL  P+  LR+R+L    ++   +H IA++G+IG+GKTTALS+ T L   S E   +S+FPTGSGR T+CEV +K APA+G+AV+CL+ D++R LV+DLVNGL   ++G+ +E++RV+R+MA + R    A   + K   +D L+ ++D  D  + +I  ++ARM LESRT +  ILS+D EG ++WLS+N++KIN GQHP F VP RITVLLP   LR +P+ IS++DTKG+EGTTQRPDL +QI+DP
Sbjct:    1 MSQVIPTVVLRTARENAGFTQSSLASRLGITASVVSRMEKADVTDRSVAWRYLDAVGSDECAAIKEFYDRAWTDSERPSFLHPDKDSLWLIEQSLQQLALFEQASDFDAILSRPIQSLRSRLLGTAQYLLRTDHTIAWVGQIGLGKTTALSYATGLTLPS-ETGRQSVFPTGSGRMTLCEVIVKAAPAYGLAVECLSADEVRGLVSDLVNGLAKRESGVSTEMDRVLRAMAGIHR---EATVDNGKKRFIDPLRRMLDDGDQPEEIINRIVARMNLESRTGSTTILSEDKEGGLEWLSTNVTKINSGQHPDFGVPVRITVLLPSRILRSSPYEISILDTKGIEGTTQRPDLRSQIDDP 354          
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Match: A0A2L0AFE9_9SPHN (HTH cro/C1-type domain-containing protein n=2 Tax=Sphingobium sp. SCG-1 TaxID=2072936 RepID=A0A2L0AFE9_9SPHN)

HSP 1 Score: 319 bits (818), Expect = 9.370e-100
Identity = 165/355 (46.48%), Postives = 239/355 (67.32%), Query Frame = 1
Query:   13 VPTHLLRLARERAGANQTTLAAELGVNA-SVVSRLESAEQADGKMAQRYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEAFEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTALSFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQIRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTVDHLKNLIDKVDDVDTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSNISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPDLMAQIEDP 1074
            +PT +LR ARE AG  Q  +AA LGV++ SVVSRLE  E  D  MA+RYL A+ +E +  I+ F+S  W   +RP F HP+R +LW+AE+ALQ L  FE S+ +D +L  P+   R  +L   +F+   EH +A+IG +GVGKTTALS +TNL+       P+ +FP   GRTT  EVAI+ APAFGI V+   ED++R +V ++V     G  G+ +E++R IR+MA+L+R     K P++  + +D +K +I+   D D V+ +++ RM+LE RTETQMILS+ T   ++WLS NI+ IN+GQH +FS+PQR+TV +P  A+R + + ++VIDTKG+ GTT+R DLMA + +P
Sbjct:   24 IPTAVLRKAREEAGIKQGDMAARLGVSSNSVVSRLERTETTDEAMARRYLEAIDTEESRAILTFYSREWSISDRPAFGHPDRELLWSAEQALQQLARFEGSEDYDALLAAPINLFRTNLLSAAEFLGEVEHSLAWIGSVGVGKTTALSHLTNLMVPGPGGRPQPVFPASGGRTTTSEVAIRTAPAFGIMVEPKPEDEVRLIVGEMVRAAAEGAGGVSTEIDRAIRNMAELKR----RKNPTDPRSFIDPIKEMIETGGDQDDVVQDIVNRMRLEQRTETQMILSETTVNGLEWLSKNITAINFGQHARFSLPQRVTVYVPESAMRRSGYRLNVIDTKGILGTTERADLMAHLAEP 374          
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Match: A0A269XR65_9PROT (HTH cro/C1-type domain-containing protein n=1 Tax=Acetobacter fabarum TaxID=483199 RepID=A0A269XR65_9PROT)

HSP 1 Score: 318 bits (816), Expect = 1.100e-99
Identity = 168/359 (46.80%), Postives = 237/359 (66.02%), Query Frame = 1
Query:    1 MNVQVPTHLLRLARERAGANQTTLAAELGVNASVVSRLESAEQADGKMAQRYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEAFEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTALSFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQIRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTVDHLKNLIDKVDDV-DTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSNISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPDLMAQIEDP 1074
            M + +PT +L+ ARE AG  QT +A  L V+ SV+SRLE +E  D  MA+RYL A+ +  + +I+ F+S  WR  ERP   HP+R  LW  ERALQ LE FE+S ++D +L  PL+ +R  I     F+   EH +A+IG +GVGKTTALS +TNL+   +   P+ +FP   GRTT  EV I+IAPA+GIAV+  +ED+IR LV ++V  +   K G+ +EL+RVIR+MADL++     K P +    +D +  +I   + V D V+ EV+ RM+L  RTETQ+ILS+  E  + WLS NI+ IN+GQ P+FS+PQR+TV +P  A+R +P+ +S+IDTKG+  TT+R DL A   DP
Sbjct:    1 MAMSIPTLILKRAREDAGLRQTAMAERLSVSGSVISRLEHSETTDETMARRYLEAVDTPASRDILEFYSREWRLSERPTVYHPDREALWEGERALQRLEVFERSAEYDALLAAPLSLIRTNIEASAAFLGETEHAMAWIGTVGVGKTTALSHLTNLMIPGKNGIPQPVFPASGGRTTTSEVVIRIAPAYGIAVEPKSEDEIRLLVAEMVRAVADKKGGISTELDRVIRNMADLKK----QKNPEDIRNQIDPISAMIQLANGVQDDVVEEVVNRMRLGERTETQLILSETNEDGLKWLSKNITAINFGQDPRFSIPQRVTVFVPETAVRRSPYGLSIIDTKGMHVTTERSDLQALTNDP 355          
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Match: A0A0Q8ICM5_9HYPH (HTH cro/C1-type domain-containing protein n=1 Tax=Devosia sp. Root685 TaxID=1736587 RepID=A0A0Q8ICM5_9HYPH)

HSP 1 Score: 314 bits (805), Expect = 4.400e-98
Identity = 159/349 (45.56%), Postives = 232/349 (66.48%), Query Frame = 1
Query:    7 VQVPTHLLRLARERAGANQTTLAAELGVNASVVSRLESAEQADGKMAQRYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEAFEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTALSFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQIRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTVDHLKNLIDKVDDVDTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSNISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPDL 1053
            + +PT  L+ ARE A   QT +A  LGVN SV+SRLE +E  D +MA+RYL AL +  + E++ F+   WR  ERP  +HP+R  LW AE ALQ L+ F++S Q+D +L  PLT +R+ +     F+   +H +AF+G +GVGKTTALS +TNL+   +   P+ +FP   GRTT  EV I++ PA+GI V+  +ED+IR LV+++V  +  GK G+P+ELER +R+MAD+R+     + PS+  + +D +  L+D     + V+  ++ RMKL  RTETQ+ILS+  E  + WLS NI+ IN+G  P+FS+PQR+TV +P  A+R + F +SVIDTKG+ GT +R DL
Sbjct:    1 MSIPTSALKRARELAKVKQTEMAKLLGVNPSVISRLEQSEMTDDQMARRYLEALDTPGSKEVLEFYGRDWRMSERPSVMHPDRESLWEAELALQKLDEFQRSSQYDALLDAPLTLIRDNLESSAAFLDKTDHAVAFVGSVGVGKTTALSLLTNLVIPDKGGVPQPVFPATGGRTTTSEVIIRVQPAYGIGVEPRSEDEIRLLVSEMVRAVVEGKGGIPTELERAVRNMADIRK----RRNPSDIKSQIDPIAELLDS-SSAEDVVEAIVNRMKLPERTETQLILSETNEEGLAWLSKNITAINFGLDPRFSLPQRVTVFVPKAAMRNSTFDVSVIDTKGIHGTIERSDL 344          
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Match: A0A418WF49_9PROT (XRE family transcriptional regulator n=1 Tax=Oleomonas cavernae TaxID=2320859 RepID=A0A418WF49_9PROT)

HSP 1 Score: 314 bits (805), Expect = 4.730e-98
Identity = 164/357 (45.94%), Postives = 235/357 (65.83%), Query Frame = 1
Query:    7 VQVPTHLLRLARERAGANQTTLAAELGVNA-SVVSRLESAEQADGKMAQRYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEAFEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTALSFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQIRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTVDHLKNLIDKVDDV-DTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSNISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPDLMAQIED 1071
            + VPT  LR ARE AG NQ  +A  LGV++ SV+SRLE  E  D  MA+RYL A+ +E +  ++ F+S  W+  +RP+F HPNR VLW AE+ALQ LEAFE +D+FD +L  PL   R  +L   D++   +H +A+IG +G+GKTTALS +TNL+       P++IFPT  GRTT  EV ++ APAF + V+   ED++R LV + V+ +  GK G+ +ELER IRSMADL +     K  S+    +D +K L+D      + V+  ++ RM+LE RTETQM +S++    + WLSS ++ IN+G+HP+ S+P R+ V LP  A+R++P+ +++IDTKG+ GTT RPDL A   D
Sbjct:    1 MSVPTAALRKARENAGINQGEMAKRLGVSSNSVISRLEKTEVTDRSMAERYLKAIGTEDSLAMLDFYSRDWKVSKRPDFRHPNRDVLWAAEQALQDLEAFEAADEFDQLLTAPLIFTRETLLATADYVGRIDHALAWIGAVGIGKTTALSHLTNLVYPDSAGRPRAIFPTSGGRTTTSEVVVRAAPAFSVTVEPKGEDEVRLLVREFVDAVADGKGGISTELERAIRSMADLPK----RKDSSDPKALLDPVKELLDGASGAREDVVHAIVTRMRLEQRTETQMFMSENNTSGLQWLSSVVTDINFGRHPRVSIPDRVIVFLPKSAIRKSPYDLTIIDTKGIHGTTDRPDLQALTAD 353          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16224.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y6SR45_9BRAD4.540e-22189.11Helix-turn-helix transcriptional regulator n=1 Tax... [more]
UPI001658E2A27.310e-19579.83helix-turn-helix domain-containing protein n=1 Tax... [more]
A0A4R6YDT2_9HYPH1.730e-16769.19Helix-turn-helix protein n=2 Tax=Hyphomicrobiales ... [more]
UPI001E5F88624.390e-16367.23helix-turn-helix domain-containing protein n=1 Tax... [more]
UPI0014419DD45.840e-16367.79helix-turn-helix domain-containing protein n=2 Tax... [more]
UPI001C94D4D91.860e-10949.44helix-turn-helix transcriptional regulator n=1 Tax... [more]
A0A2L0AFE9_9SPHN9.370e-10046.48HTH cro/C1-type domain-containing protein n=2 Tax=... [more]
A0A269XR65_9PROT1.100e-9946.80HTH cro/C1-type domain-containing protein n=1 Tax=... [more]
A0A0Q8ICM5_9HYPH4.400e-9845.56HTH cro/C1-type domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16224contigP-wetherbeei_contig16224:1..1074 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1082933.MEA186_24917
Model size1074
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.68e-95
EggNOG OGsCOG1419@1|root,COG1419@2|Bacteria,1R2A1@1224|Proteobacteria,2UNQU@28211|Alphaproteobacteria
Descriptionprotein localization to endoplasmic reticulum
Cds size1074
COG categoryN
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186080.613639-CDS-P-wetherbeei_contig16224:0..10741683186080.613639-CDS-P-wetherbeei_contig16224:0..1074Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16224 1..1074 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16224.1.1prot_P-wetherbeei_contig16224.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16224 1..1074 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16224.1.1

>prot_P-wetherbeei_contig16224.1.1 ID=prot_P-wetherbeei_contig16224.1.1|Name=mRNA_P-wetherbeei_contig16224.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=358bp
MNVQVPTHLLRLARERAGANQTTLAAELGVNASVVSRLESAEQADGKMAQ
RYLAALKSEFANEIVAFFSDRWRHIERPEFLHPNRAVLWNAERALQTLEA
FEKSDQFDPILQDPLTKLRNRILWEVDFIRHKEHGIAFIGEIGVGKTTAL
SFVTNLITKSREEEPKSIFPTGSGRTTVCEVAIKIAPAFGIAVDCLTEDQ
IRRLVTDLVNGLKFGKNGLPSELERVIRSMADLRRVTIRAKKPSEKPTTV
DHLKNLIDKVDDVDTVIGEVMARMKLESRTETQMILSQDTEGSMDWLSSN
ISKINYGQHPKFSVPQRITVLLPLEALRETPFLISVIDTKGVEGTTQRPD
LMAQIEDP
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mRNA from alignment at P-wetherbeei_contig16224:1..1074-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16224.1.1 ID=mRNA_P-wetherbeei_contig16224.1.1|Name=mRNA_P-wetherbeei_contig16224.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1074bp|location=Sequence derived from alignment at P-wetherbeei_contig16224:1..1074- (Phaeothamnion wetherbeei SAG_119_79)
ATGAATGTCCAAGTTCCGACCCATCTCTTGCGTCTTGCCCGTGAAAGGGC TGGAGCAAACCAAACTACGCTGGCAGCTGAACTTGGGGTCAATGCAAGTG TTGTTTCGCGCTTAGAATCCGCCGAACAGGCCGACGGGAAAATGGCCCAG CGGTATCTTGCGGCACTGAAATCAGAGTTTGCGAACGAGATTGTCGCGTT CTTTTCTGATCGCTGGCGGCATATCGAGCGCCCCGAGTTTTTGCATCCTA ACCGTGCTGTTCTGTGGAACGCGGAACGCGCCCTACAGACGCTCGAAGCA TTCGAGAAAAGCGATCAGTTCGATCCAATCTTGCAGGATCCGCTGACCAA GCTGCGCAATCGTATTCTCTGGGAAGTCGACTTTATCCGGCATAAGGAAC ATGGCATCGCGTTTATTGGCGAGATCGGCGTCGGCAAAACCACGGCGCTG TCGTTTGTCACCAACCTGATAACGAAGAGCAGAGAAGAGGAACCAAAGAG TATTTTTCCTACTGGCAGCGGGCGTACCACTGTCTGCGAAGTCGCTATTA AAATTGCGCCAGCGTTCGGCATCGCGGTCGATTGCTTAACGGAAGATCAA ATCCGCCGTCTCGTGACTGATCTCGTTAATGGCCTGAAGTTTGGCAAGAA CGGGCTTCCGAGCGAGCTTGAGCGCGTGATCCGCAGCATGGCTGACCTGC GGCGGGTGACTATCCGCGCTAAGAAGCCGTCGGAGAAGCCGACCACGGTC GACCATCTCAAGAATCTCATCGACAAAGTCGATGATGTGGACACCGTGAT CGGAGAGGTGATGGCTCGGATGAAGTTGGAAAGCCGCACCGAGACCCAAA TGATTTTGTCGCAAGACACGGAAGGCAGTATGGATTGGCTGTCTTCGAAT ATCAGCAAGATTAATTACGGGCAGCATCCAAAATTCTCTGTACCTCAACG TATCACGGTTCTTTTGCCGCTTGAGGCGCTACGCGAGACGCCGTTCTTGA TCAGCGTCATCGACACCAAGGGAGTTGAAGGTACGACGCAGCGTCCAGAC TTGATGGCGCAGATCGAGGACCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16224:1..1074-

>mRNA_P-wetherbeei_contig16224.1.1 ID=mRNA_P-wetherbeei_contig16224.1.1|Name=mRNA_P-wetherbeei_contig16224.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1074bp|location=Sequence derived from alignment at P-wetherbeei_contig16224:1..1074- (Phaeothamnion wetherbeei SAG_119_79)
ATGAATGTCCAAGTTCCGACCCATCTCTTGCGTCTTGCCCGTGAAAGGGC
TGGAGCAAACCAAACTACGCTGGCAGCTGAACTTGGGGTCAATGCAAGTG
TTGTTTCGCGCTTAGAATCCGCCGAACAGGCCGACGGGAAAATGGCCCAG
CGGTATCTTGCGGCACTGAAATCAGAGTTTGCGAACGAGATTGTCGCGTT
CTTTTCTGATCGCTGGCGGCATATCGAGCGCCCCGAGTTTTTGCATCCTA
ACCGTGCTGTTCTGTGGAACGCGGAACGCGCCCTACAGACGCTCGAAGCA
TTCGAGAAAAGCGATCAGTTCGATCCAATCTTGCAGGATCCGCTGACCAA
GCTGCGCAATCGTATTCTCTGGGAAGTCGACTTTATCCGGCATAAGGAAC
ATGGCATCGCGTTTATTGGCGAGATCGGCGTCGGCAAAACCACGGCGCTG
TCGTTTGTCACCAACCTGATAACGAAGAGCAGAGAAGAGGAACCAAAGAG
TATTTTTCCTACTGGCAGCGGGCGTACCACTGTCTGCGAAGTCGCTATTA
AAATTGCGCCAGCGTTCGGCATCGCGGTCGATTGCTTAACGGAAGATCAA
ATCCGCCGTCTCGTGACTGATCTCGTTAATGGCCTGAAGTTTGGCAAGAA
CGGGCTTCCGAGCGAGCTTGAGCGCGTGATCCGCAGCATGGCTGACCTGC
GGCGGGTGACTATCCGCGCTAAGAAGCCGTCGGAGAAGCCGACCACGGTC
GACCATCTCAAGAATCTCATCGACAAAGTCGATGATGTGGACACCGTGAT
CGGAGAGGTGATGGCTCGGATGAAGTTGGAAAGCCGCACCGAGACCCAAA
TGATTTTGTCGCAAGACACGGAAGGCAGTATGGATTGGCTGTCTTCGAAT
ATCAGCAAGATTAATTACGGGCAGCATCCAAAATTCTCTGTACCTCAACG
TATCACGGTTCTTTTGCCGCTTGAGGCGCTACGCGAGACGCCGTTCTTGA
TCAGCGTCATCGACACCAAGGGAGTTGAAGGTACGACGCAGCGTCCAGAC
TTGATGGCGCAGATCGAGGACCCG
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