mRNA_P-wetherbeei_contig162.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig162.1.3
Unique NamemRNA_P-wetherbeei_contig162.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Match: D7G279_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G279_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 6.690e-98
Identity = 159/237 (67.09%), Postives = 181/237 (76.37%), Query Frame = 1
Query:    1 MKFGKNISRVVELSDPEWAPFWLNYKFLKKKVKGLEEHDG----AAATLSSPAAIAKSAGEVAFFKLTRQELRKCSEFFTSAETQFLVRQKRVAEGWRQLKTPDHLADGDPHKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYRTRERFMKNVVNLAPFTRYPKVMEMLNEVENLFKEIQVFSSSTHVTHNS----EEQLFIDAMRTINTEASKLQQQETADIGMNV 687
            MKFGKNI RVVELSDPEW+PFW+NYKFLKKKVK LE   G    + A  S P A+A+SAGEV F++L RQELRKCSEFFT  E Q  VRQ RV EGWRQL  P+ + +G+P+KRLMAACVKLYKDLLLLEN+AIM YCGFSKILKKHDK TG+RTRE FMKNVV  APF +YPKV++ML+ VE LFK I+   S++          EEQLFID M TINTEA +LQQ E ADIG  V
Sbjct:    1 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEVPSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQELRKCSEFFTGVEGQLGVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGEGV 237          
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Match: A0A835Z5J1_9STRA (SPX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J1_9STRA)

HSP 1 Score: 270 bits (689), Expect = 7.360e-87
Identity = 142/220 (64.55%), Postives = 168/220 (76.36%), Query Frame = 1
Query:    1 MKFGKNISRVVELSDPEWAPFWLNYKFLKKKVKGLEEHDGAAAT----------LSSPAAIAKSAGEVAFFKLTRQELRKCSEFFTSAETQFLVRQKRVAEGWRQLKT-PDHLADGDPHKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYRTRERFMKNVVNLAP-FTRYPKVMEMLNEVENLFKEIQVFSSSTHVTHNSEEQLFIDAMR 624
            MKFGKN+ RVVELSDPEW+PFWLNYK LKK +K ++     +A           LSSP A++KSAGEVAFFK  RQELRKC EFF SAE+QFLVR+ RV EGWRQL   P+   DG+ +KRLMAACV+LYKDLLLLEN+AIM Y  FSKILKKHDK TG+ TRER+MKNVVN+   FT YP+V+EML +VE LF+ IQ  ++   + H+SEEQLFIDAMR
Sbjct:    1 MKFGKNLERVVELSDPEWSPFWLNYKHLKKMLKEVQHTPAPSAAGAPIAKPPNGLSSPEALSKSAGEVAFFKFLRQELRKCKEFFASAESQFLVRRARVREGWRQLTAVPEVPVDGEQYKRLMAACVRLYKDLLLLENFAIMNYTAFSKILKKHDKLTGFCTRERYMKNVVNMTTSFTHYPRVLEMLEDVEELFRGIQTHAN---IAHSSEEQLFIDAMR 217          
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Match: A0A4D9D3X8_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X8_9STRA)

HSP 1 Score: 223 bits (567), Expect = 4.770e-67
Identity = 123/279 (44.09%), Postives = 167/279 (59.86%), Query Frame = 1
Query:    1 MKFGKNISRVVELSDPEWAPFWLNYKFLKKKVKGLEEHDGAAA-----------------TLSSPAAIAKSAGEVAFFKLTRQELRKCSEFFTSAETQFLVRQKRVAEGWRQLKTPDHLADGDPHKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYRTRERFMKNVVNLAPFTRYPKVMEMLNEVENLFKEIQVFSSSTHVTHNSEEQLFIDAMRTINTEASKLQQQETADIG-MNVADFDGPVAGAPGGRRLRTFSEACDLSHAAGDA 783
            MKFGK +++VV LSDPEWAPFW++YK LKK+VK L E   AA                  T  +P  +A+SAGEVAFF+  R E+ K SEF+   E Q   R++R+  G + LK P  + + D   ++  AC+ LYKDLLLLEN+A+M YC  SK LKKHDK     TR RFM+NVVN  PFT YP+++EML E+E +FKEI             EE+LF++A+R +N EAS +Q++E AD+G  + +D +      P  R   T + A   +H +  A
Sbjct:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSVNQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKARPLEEEERLFLEAIRGLNQEASSMQREEKADLGGASTSDPEHSADDQPAARDAATAAGAACQTHRSAPA 279          
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Match: W7TGL0_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGL0_9STRA)

HSP 1 Score: 223 bits (567), Expect = 6.260e-66
Identity = 123/279 (44.09%), Postives = 167/279 (59.86%), Query Frame = 1
Query:    1 MKFGKNISRVVELSDPEWAPFWLNYKFLKKKVKGLEEHDGAAA-----------------TLSSPAAIAKSAGEVAFFKLTRQELRKCSEFFTSAETQFLVRQKRVAEGWRQLKTPDHLADGDPHKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYRTRERFMKNVVNLAPFTRYPKVMEMLNEVENLFKEIQVFSSSTHVTHNSEEQLFIDAMRTINTEASKLQQQETADIG-MNVADFDGPVAGAPGGRRLRTFSEACDLSHAAGDA 783
            MKFGK +++VV LSDPEWAPFW++YK LKK+VK L E   AA                  T  +P  +A+SAGEVAFF+  R E+ K SEF+   E Q   R++R+  G + LK P  + + D   ++  AC+ LYKDLLLLEN+A+M YC  SK LKKHDK     TR RFM+NVVN  PFT YP+++EML E+E +FKEI             EE+LF++A+R +N EAS +Q++E AD+G  + +D +      P  R   T + A   +H +  A
Sbjct:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKARPLEEEERLFLEAIRGLNQEASSMQREEKADLGGASTSDPEHSADDQPAARDAATAAGAACQTHRSAPA 279          
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Match: A0A6H5L5H8_9PHAE (SPX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H8_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 5.280e-56
Identity = 99/149 (66.44%), Postives = 116/149 (77.85%), Query Frame = 1
Query:  262 RVAEGWRQLKTPDHLADGDPHKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYRTRERFMKNVVNLAPFTRYPKVMEMLNEVENLFKEIQVFSSSTHVTHNS----EEQLFIDAMRTINTEASKLQQQETADIGMNVADF 696
            RV EGWRQL  P+ + +G+P+KRLMAACVKLYKDLLLLEN+AIM YCGFSKILKKHDK TG+RTRE FMKNVVN APF +YPKV++ML+ VE LFK I+   S++          EEQLFID M TINTEA +LQQ E ADIG+N  +F
Sbjct:   12 RVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGLNTPEF 160          
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Match: A0A7S2SN02_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN02_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.080e-51
Identity = 100/213 (46.95%), Postives = 129/213 (60.56%), Query Frame = 1
Query:    1 MKFGKNISRVVELSDPEWAPFWLNYKFLKKKVKGLEE---------HDGAAATLSS------------------PAAIAKSAGEVAFFKLTRQELRKCSEFFTSAETQFLVRQKRVAEGWRQLKTPDHLADGDPHKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYRTRERFMKNVVNLAPFTRYPKVMEMLNEVENLFKEIQ 558
            MKFGK + RV  +SDPEWAPFW+NYK+LKKK+  +E          H+ A  + +S                  P  I +SAGE+AFFK  + EL K + FF SAE +   R KRV EG RQ+   ++    D   RLM ACV LYKDL++LENYA+MT+  FSKILKKHDK T Y TR +FM   VN  PF RY ++  ML+ V +LF+++Q
Sbjct:   20 MKFGKKLLRVQSMSDPEWAPFWVNYKYLKKKINEIETLRSVAQPEAHNSAVPSSASISVNAADAAANVRTEPLDPDTIKESAGEIAFFKAVQTELVKSATFFVSAEQELHERWKRVCEGMRQIGDRNYTVLDDATPRLMRACVSLYKDLIMLENYAVMTHSAFSKILKKHDKRTRYATRVKFMSRRVNHQPFVRYIQLKTMLDRVADLFRQVQ 232          
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Match: A0A8J2SU39_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU39_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.610e-51
Identity = 99/205 (48.29%), Postives = 130/205 (63.41%), Query Frame = 1
Query:    1 MKFGKNISRVVELSDPEWAPFWLNYKFLKKKVKGLEEHDGAAATLS-------SPAAIAKSAGEVAFFKLTRQELRKCSEFFTSAETQFLVRQKRVAEGWRQLKTPDHLAD-GDPHKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYRTRERFMKNVVNLAPFTRYPKVMEMLNEVENLFKEIQVFSSSTHVTHN 591
            MKFG ++ RVV +SD EWAP+++ YK LKK +K ++    +              A +AKSA EVAFF+  R EL+K ++FF  AE    VR++RV E  RQL+  D L    D   R + ACV  Y+DLLLLENYAIM YCGFSKILKKHDK TG+ TR +FM+  V   PFTRYP++MEM+ E E+L+++I   S     T +
Sbjct:    1 MKFGHDMHRVVRVSDAEWAPYFMQYKLLKKCIKQIKADPSSPPVAECCERGDCEKATMAKSAPEVAFFRALRFELQKSAQFFRQAELVLEVRRERVREALRQLQDEDRLGLLEDAPDRALRACVTYYRDLLLLENYAIMNYCGFSKILKKHDKQTGFTTRTQFMRVCVAPQPFTRYPRLMEMIREAEDLYRDIAAASDRIRGTRS 205          
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Match: A0A7R9YCT0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCT0_9STRA)

HSP 1 Score: 182 bits (463), Expect = 2.650e-51
Identity = 112/289 (38.75%), Postives = 153/289 (52.94%), Query Frame = 1
Query:    1 MKFGKNISRVVELSDPEWAPFWLNYKFLKKKVKGLEEHDGAAATLSS----PAAIAKSAGEVAFFKLTRQELRKCSEFFTSAETQFLVRQKRVAEGWRQLKTPDH---------------------LADGDP-------HKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYRTRERFMKNVVNLAPFTRYPKVMEMLNEVENLFKEIQVFSSS--------------------------------THVTHNSEEQLFIDAMRTINTEASKLQQQETADI 675
            MKF KN+  VV+LS PEWAPFW++YK LKK++K +     + A+         AIA+ A E+ FF     ELRK  EF+  AET+F +R  RV EG RQL  P +                     +A G+         +R ++ACV++YKDLLLLE YAIM+YC FSKILKKHDK TGY TR ++M  VVN  PFT+Y  V++ML + E+LFK +   +                                  + +  + EEQLFID +R +N EA+ L + E  ++
Sbjct:    1 MKFCKNLLEVVDLSHPEWAPFWMDYKTLKKRLKDMSAAKRSGASPKKRGRREVAIAEDALEIQFFSHLMAELRKTEEFYKGAETEFRIRISRVREGVRQLLEPAYRPVEPETSTDDSDSADASHAPVAGGEAVAPENPKRRRALSACVRIYKDLLLLETYAIMSYCAFSKILKKHDKVTGYTTRTQYMSRVVNPKPFTKYKGVVKMLRDCESLFKILTTQTEGPDAELPSPRRRTNKQAGARDALSLSDWSDEMRSKLPLHEEEQLFIDVIRNLNNEATSLMRDEQKEV 289          
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Match: A0A7S1XNX0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNX0_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.880e-50
Identity = 112/286 (39.16%), Postives = 152/286 (53.15%), Query Frame = 1
Query:    1 MKFGKNISRVVELSDPEWAPFWLNYKFLKKKVKGLEEHDGAA----ATLSSPAAIAKSAGEVAFFKLTRQELRKCSEFFTSAETQFLVRQKRVAEGWRQLK--------TPDHLADGDP--------------------HKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYRTRERFMKNVVNLAPFTRYPKVMEMLNEVENLFKEIQV------------------FSSSTHVTH-----------NSEEQLFIDAMRTINTEASKLQQQETADI 675
            MKFGKN+  VV +S+PEWAPFW++YK LKK++K +     A     A      AIA  A E+AFF+    EL    +F+ SAE +F +R  RV  G RQ+         +P   A G                       +R + +C+++YKDLLLLENYA+M+YCGFSKILKKHDK TGYRTR ++M+ VVN  PF +Y  V +ML+E E+LF+ +                     S    ++            + EE LFIDA+R IN EAS L + E A++
Sbjct:    1 MKFGKNLLEVVAMSNPEWAPFWIDYKMLKKRLKDMAPDAAAGKQQGAQQQPRGAIASDAKEIAFFRHLMAELNHTVDFYKSAEAEFRIRIWRVHAGLRQITEAGSPRATSPVPFAPGAATVEGGDAEGQAPPCEWQCAMKRRALTSCLRIYKDLLLLENYAVMSYCGFSKILKKHDKVTGYRTRAQYMRRVVNPKPFCKYQGVAKMLHECEDLFRRLAAPVEPGPGGGDAGTAAPNGGSEGLPISDWSDDRRKKFALHEEEHLFIDAIRNINKEASTLARDERAEV 286          
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Match: A0A7S2D364_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D364_9STRA)

HSP 1 Score: 175 bits (444), Expect = 3.620e-49
Identity = 99/242 (40.91%), Postives = 148/242 (61.16%), Query Frame = 1
Query:    1 MKFGKNISRVVELSDPEWAPFWLNYKFLKKKVKGLE-----------EHDGAAATLSSP-----AAIAKSAGEVAFFKLTRQELRKCSEFFTSAETQFLVRQKRVAEGWRQLKTPDHLADGDPHKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYRTRERFMKNVVNLAP-FTRYPKVMEMLNEVENLFKEIQVFS-SSTHVTHNSEEQLFIDAMRTINTEASKLQQQETAD 672
            MKF K + +VV  SDPEWAP ++NYK+LKK++  ++           + D      SSP      +I +S GE  FFK    ELRK SEFF +AE Q ++R  R+ EG RQL+    +   +  + +MAAC+KLYKDLL+LENYAI+ +CGFSKILKKHDK TG+ TR+RFM N V+      +Y  +  ++ E E+LF EI   S ++T ++  ++E++ I+++  +  +A + ++    D
Sbjct:    1 MKFAKTLQQVVSTSDPEWAPLFMNYKYLKKRINAIKIMNNTYSNSLPQADAGIENSSSPHETSKRSITESIGERDFFKALHAELRKSSEFFRAAEQQMVIRIARIKEGARQLRETFTVTHENLDQMIMAACLKLYKDLLMLENYAIINFCGFSKILKKHDKNTGFVTRDRFMNNTVSRHEHLCKYEVLKRIIKETEDLFVEISKISHTNTKLSLQTDERISIESILNLKFQAIRFKKSVCGD 242          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig162.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G279_ECTSI6.690e-9867.09SPX domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z5J1_9STRA7.360e-8764.55SPX domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D3X8_9STRA4.770e-6744.09SPX domain-containing protein n=1 Tax=Nannochlorop... [more]
W7TGL0_9STRA6.260e-6644.09SPX domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A6H5L5H8_9PHAE5.280e-5666.44SPX domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2SN02_9STRA2.080e-5146.95Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2SU39_9STRA2.610e-5148.29Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7R9YCT0_9STRA2.650e-5138.75Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XNX0_9STRA2.880e-5039.16Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2D364_9STRA3.620e-4940.91Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig162contigP-wetherbeei_contig162:2..1704 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G279
PFAMsSPX
Model size987
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.1e-98
EggNOG OGsCOG5036@1|root,KOG1161@2759|Eukaryota
Ec32 ortholog descriptionSPX, N-terminal
Ec32 orthologEc-16_002150.1
Descriptioncellular response to phosphate starvation
Cds size987
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186079.7503793-CDS-P-wetherbeei_contig162:1..4191683186079.7503793-CDS-P-wetherbeei_contig162:1..419Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig162 2..419 -
1683186079.7659898-CDS-P-wetherbeei_contig162:642..7681683186079.7659898-CDS-P-wetherbeei_contig162:642..768Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig162 643..768 -
1683186079.7756703-CDS-P-wetherbeei_contig162:1067..13231683186079.7756703-CDS-P-wetherbeei_contig162:1067..1323Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig162 1068..1323 -
1683186079.7847445-CDS-P-wetherbeei_contig162:1517..17041683186079.7847445-CDS-P-wetherbeei_contig162:1517..1704Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig162 1518..1704 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig162.1.3prot_P-wetherbeei_contig162.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig162 2..1704 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig162.1.3

>prot_P-wetherbeei_contig162.1.3 ID=prot_P-wetherbeei_contig162.1.3|Name=mRNA_P-wetherbeei_contig162.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=329bp
MKFGKNISRVVELSDPEWAPFWLNYKFLKKKVKGLEEHDGAAATLSSPAA
IAKSAGEVAFFKLTRQELRKCSEFFTSAETQFLVRQKRVAEGWRQLKTPD
HLADGDPHKRLMAACVKLYKDLLLLENYAIMTYCGFSKILKKHDKATGYR
TRERFMKNVVNLAPFTRYPKVMEMLNEVENLFKEIQVFSSSTHVTHNSEE
QLFIDAMRTINTEASKLQQQETADIGMNVADFDGPVAGAPGGRRLRTFSE
ACDLSHAAGDAGDAAAGGSAAAAADAVAAAAAAAAGEALKRSLTEGDMGP
IGGCHGAVMGGGYGGYDGGHVERTGKRQK
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mRNA from alignment at P-wetherbeei_contig162:2..1704-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig162.1.3 ID=mRNA_P-wetherbeei_contig162.1.3|Name=mRNA_P-wetherbeei_contig162.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1703bp|location=Sequence derived from alignment at P-wetherbeei_contig162:2..1704- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGTTTGGAAAAAATATCTCGCGGGTGGTCGAGCTTTCCGATCCCGA GTGGGCACCGTTCTGGCTGAACTACAAGTTCCTCAAAAAGAAGGTGAAGG GCCTGGAAGAGCATGACGGCGCAGCTGCCACGCTCAGCAGCCCGGCGGCC ATCGCCAAGAGCGCCGGCGAGGTCGCCTTTTTTAAATGTACGTTCGTCCG AGCACGCCTTGCAAACTGAAGAAGATTCTCCTCCCTTTCGCTCGGCGCTG CATTGTTGGGAAAATATTGTCGGCGGGTTTCGTGTCTTCACTATTTGCAT CACATTTGCTTTTCTGCCTGAAAAGCTGACCAAACACCCATCTTTTACCC CTCGCATTTGCTGTCATCCCCCACATAGTAGTGACGCGACAAGAGCTGCG CAAGTGCTCGGAATTCTTCACGAGCGCGGAAACGCAGTTTCTGGTGCGGC AGAAGCGGGTGGCGGAAGGGTGGCGGCAGCTAAAAACGCCTGACCACCTC GCCGATGGCGACCCACACAAGCGGCTGATGGCGGCGTGCGTCAAGCTGTA TAAGGACCTCCTGTTGCTGGAGAACTACGCCATCATGACCTACTGCGGTT TCAGCAAGATCCTCAAGAAGCACGACAAGGCGACCGGGTACGGCGATATG ACCACGCTTTTTTCCTGATTTCTGCTTGTTGCTCCATCGTTCCATTTCAG CAACATGCCTGCTGCTGTGTGTCATCGCCAGGCCGTGCAACTGTGGTGCG CTGGCCGCCGCCGGGGACCGTTGGCGGCCTCATTCCTCTGGGAACATCGA AAGAATCAATGGTTCATTATGCCGACTTTCTCATTAAGCTACCTACTTTT GTTTCGGGACCAAGCTCAGAGGTCTTTCTGTCCTTTGGCGTCCCGCCCCT TCTCAAAACGGAACGCGCCCGCCCTGAATTTCCCAGGTACCGGACCCGGG AACGCTTCATGAAGAATGTGGTGAACCTGGCGCCGTTCACGCGCTACCCG AAGGTGATGGAGATGCTGAACGAGGTGGAGAACCTCTTCAAGGAGATCCA GGTCTTTAGCAGGCGAGTGGGCATGCGGCTGCTTGGGTAGCAGGGGTGGC ACGCCGACACCGAACTTTTCCTTAAAAAGAGGGACGGGGGCCGGGAGTGA AAACCGACTTTGTTTTCGATGTTGCTTTTTTCTGAGGACCTTTGACATTG TTGTTGTTGCACCACGCCTTCATGACGTCTTTGCCGCCGCCGTTTCCAAC CGCCGCTGCCGTCCCCATTTTTGCAACCTCTGCAGCTCCACGCACGTTAC GCACAACAGCGAGGAGCAACTCTTCATCGACGCGATGCGGACGATCAACA CAGAGGCCAGCAAGCTGCAGCAGCAGGAGACTGCAGACATCGGCATGAAT GTAGCTGATTTTGACGGCCCGGTGGCAGGCGCCCCGGGCGGCCGTCGGCT ACGAACATTCAGCGAGGCGTGCGACCTCAGCCACGCGGCTGGGGATGCGG GAGACGCAGCGGCCGGGGGCTCCGCCGCTGCTGCCGCGGATGCAGTCGCG GCCGCAGCTGCGGCTGCGGCGGGGGAGGCGCTGAAGAGGAGCCTGACAGA GGGGGACATGGGGCCGATCGGGGGGTGCCACGGAGCGGTGATGGGCGGTG GATACGGCGGCTACGATGGGGGGCACGTCGAGAGAACAGGCAAGAGGCAA AAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig162:2..1704-

>mRNA_P-wetherbeei_contig162.1.3 ID=mRNA_P-wetherbeei_contig162.1.3|Name=mRNA_P-wetherbeei_contig162.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=987bp|location=Sequence derived from alignment at P-wetherbeei_contig162:2..1704- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGTTTGGAAAAAATATCTCGCGGGTGGTCGAGCTTTCCGATCCCGA
GTGGGCACCGTTCTGGCTGAACTACAAGTTCCTCAAAAAGAAGGTGAAGG
GCCTGGAAGAGCATGACGGCGCAGCTGCCACGCTCAGCAGCCCGGCGGCC
ATCGCCAAGAGCGCCGGCGAGGTCGCCTTTTTTAAATTGACGCGACAAGA
GCTGCGCAAGTGCTCGGAATTCTTCACGAGCGCGGAAACGCAGTTTCTGG
TGCGGCAGAAGCGGGTGGCGGAAGGGTGGCGGCAGCTAAAAACGCCTGAC
CACCTCGCCGATGGCGACCCACACAAGCGGCTGATGGCGGCGTGCGTCAA
GCTGTATAAGGACCTCCTGTTGCTGGAGAACTACGCCATCATGACCTACT
GCGGTTTCAGCAAGATCCTCAAGAAGCACGACAAGGCGACCGGGTACCGG
ACCCGGGAACGCTTCATGAAGAATGTGGTGAACCTGGCGCCGTTCACGCG
CTACCCGAAGGTGATGGAGATGCTGAACGAGGTGGAGAACCTCTTCAAGG
AGATCCAGGTCTTTAGCAGCTCCACGCACGTTACGCACAACAGCGAGGAG
CAACTCTTCATCGACGCGATGCGGACGATCAACACAGAGGCCAGCAAGCT
GCAGCAGCAGGAGACTGCAGACATCGGCATGAATGTAGCTGATTTTGACG
GCCCGGTGGCAGGCGCCCCGGGCGGCCGTCGGCTACGAACATTCAGCGAG
GCGTGCGACCTCAGCCACGCGGCTGGGGATGCGGGAGACGCAGCGGCCGG
GGGCTCCGCCGCTGCTGCCGCGGATGCAGTCGCGGCCGCAGCTGCGGCTG
CGGCGGGGGAGGCGCTGAAGAGGAGCCTGACAGAGGGGGACATGGGGCCG
ATCGGGGGGTGCCACGGAGCGGTGATGGGCGGTGGATACGGCGGCTACGA
TGGGGGGCACGTCGAGAGAACAGGCAAGAGGCAAAAG
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