mRNA_P-wetherbeei_contig16197.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16197.1.1
Unique NamemRNA_P-wetherbeei_contig16197.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A7X9KJL7_9ACTN (Uncharacterized protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KJL7_9ACTN)

HSP 1 Score: 262 bits (670), Expect = 2.520e-82
Identity = 145/285 (50.88%), Postives = 184/285 (64.56%), Query Frame = 1
Query:    1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPATVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVCTG-TVPGAATCTAALQILG 852
            VLQPALRGRR A YE+MLEN+GNT ASCRL L+DPSGRV+ DFDPPAAGVEPGASTLIR+K+RS   QWERR RT+ F ++ADQPGSPTA   ATFVQ P+VPERL+GR  A+   +A   G WFG+VKPAI+DAA DAV    PAT T++                        + ++ +  +    P GQT  + +TVP GQ LRITD+I+QNP  D G+  + R+D  +  + L  IFG+    L TPIE+  G+ +  QV CTG   P  +TC+  + + G
Sbjct:  116 VLQPALRGRRSATYEMMLENRGNTLASCRLHLIDPSGRVEADFDPPAAGVEPGASTLIRMKVRSKGFQWERRPRTVPFRIDADQPGSPTASGSATFVQTPIVPERLVGRLIALITLVAVALGSWFGVVKPAIRDAADDAVRVAMPATTTSVVATIDSATGATVAPSVPEED----QGTIVNIPLPLAVPVGQTDAARYTVPAGQRLRITDIIVQNPNIDLGSLIIQRNDVTLYTFSLGNIFGDTSAPLITPIELLAGEQLVVQVTCTGLNDPTFSTCSQNVFVSG 396          
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A7K1B7K4_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B7K4_9ACTN)

HSP 1 Score: 231 bits (588), Expect = 7.570e-70
Identity = 148/298 (49.66%), Postives = 189/298 (63.42%), Query Frame = 1
Query:    1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVAD-ERPA-TVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLY---DNRMIANAPAG---QTLTS--TFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFG-EQQTALRTPIEVKGGQTVTYQVVCTGTV-PGAATCTAALQILGTF 858
            +LQPALR RRRA +E+M+EN+GN QASCR+ L+DP+ R+DGDFDPPA G+EPG S L+R+KL++ R QWERR+RT+ F V+ADQ G+PTA A  TFVQ P++P+RL  R  AV L   AL G WFGLV+PAI DAA DAVA  E P  TV T A              XXXXXXX    ++    ++R++A  P+G   QT     T+TVP G+   ITDL ++NP  D+GTA L           LD   G +   + RTPIE++ G+TV++QV C     PGAA CT    I GT 
Sbjct:  116 LLQPALRSRRRATFEVMVENKGNAQASCRMHLIDPTQRLDGDFDPPAIGIEPGGSQLVRMKLKATRNQWERRARTIPFRVDADQQGAPTASATGTFVQGPVLPDRLGVRLGAVVLVAGALLGAWFGLVRPAIDDAAADAVAGIELPEITVATTAAPAVTIAEQGDGSEXXXXXXXTGTNAVVPAGESRLVA-LPSGVPAQTTNEPQTYTVPAGKRFLITDLTMRNPFSDEGTAVLTVGTTSFEFDLLDYARGLDWSRSFRTPIELRAGETVSFQVTCNAVGRPGAAGCTPTATINGTL 412          
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A539E4H9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E4H9_9ACTN)

HSP 1 Score: 227 bits (579), Expect = 2.780e-68
Identity = 150/291 (51.55%), Postives = 188/291 (64.60%), Query Frame = 1
Query:    1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVAD-ERPATVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTL----TSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTA-LRTPIEVKGGQTVTYQVVCTGTV-PGAATCTAALQILG 852
            +LQPA+R RR+A YE+M+EN+GNTQASCR+ L+DP+GR+DGDFDPPAAGVEPG +TL+RLKLR+ +RQWERRSR + F VEADQ G+PTA   A+F+QAPMVPERL  R AA AL + AL G W+G+V+PAI DAA  AVA   +         XXXXXXXXXXXXXXXXXX      +L         P G  L    T T+T P+     +TD  +QNP GD+GTAT+     +   W L  + G   T    TP+ V  G+ V ++V C      GAA C+A   + G
Sbjct:  140 MLQPAIRSRRKATYEMMVENRGNTQASCRMHLIDPTGRLDGDFDPPAAGVEPGGTTLVRLKLRATKRQWERRSRAIPFRVEADQQGAPTADTAASFIQAPMVPERLWARVAAAALLVGALAGTWYGVVRPAIDDAAASAVAAIGQXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGALEGEPFSVGLPGGAALNEISTQTYTAPDDSAFLVTDFFVQNPFGDEGTATMTVG-TVSFEWDLVNLDGIDATKQFVTPLRVLAGEQVVFEVTCASIGRQGAAACSAKAVVNG 429          
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A6I3FB90_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3FB90_9ACTN)

HSP 1 Score: 216 bits (551), Expect = 1.600e-64
Identity = 132/289 (45.67%), Postives = 174/289 (60.21%), Query Frame = 1
Query:    1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAAL--FGVWFGLVKPAIKDAARDAVADERPATVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIAN------APAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVCTGTVPGAATCTAALQ 843
            +LQP  RGR    +E++L+N+GNT+ SCR+ L++P+GRV   FDP  AGVEPG STLIR ++R++  QW+R+ RT+ F ++AD+PG+PTA A  TFVQAPMVPERL G  AA A G+ AL  FG WF +VKPA++DAA  AVA   P+T TT AG                        S  D+  I N       P G+T   ++TVP GQ L +TD+++QNP GDQGT  + R+D  + ++RLD I G+    L TPIE   G  +   V C G   G AT T   Q
Sbjct:  116 LLQPVQRGRYSTTFEMLLQNRGNTRTSCRMHLLEPTGRVAATFDPGTAGVEPGTSTLIRARVRAHGVQWQRQPRTVTFRIDADEPGTPTASASGTFVQAPMVPERL-GVWAAGAAGVVALALFG-WFLVVKPAVRDAADRAVATALPST-TTAAGSPTDTGPA-------------TSTSGNDSGTIVNIPIPVATPVGETAALSYTVPAGQRLHVTDIVVQNPNGDQGTLFVQRNDITLYSFRLDNILGDTSVPLVTPIEFFAGDQLVVTVTCGGV--GNATATTCTQ 386          
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A6I3WSZ4_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3WSZ4_9ACTN)

HSP 1 Score: 211 bits (538), Expect = 1.760e-62
Identity = 118/289 (40.83%), Postives = 159/289 (55.02%), Query Frame = 1
Query:    1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPAT-VTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVC--TGTVPGAATCTAALQILGTF 858
            +LQP LRGRRRA +E ++EN GN QASCRL L+D + R+DG FDPPA G+EPGA +L+RL+L+S  RQ    SRTL F+VEADQ G PTA   ATFVQ+P++ E    R       +  L G WF L KP ++ AARDAV     +  V  + G                          ++ R++       + T  + VP G+VLRITD++LQNP  D G A L  +D ++  WRL+   G +   L +P+  KGG  VT+   C   G  P   +C  A+ + GT 
Sbjct:  116 MLQPVLRGRRRATFEFLVENHGNLQASCRLHLIDTTQRLDGAFDPPAIGIEPGAKSLVRLRLKSLHRQMSGESRTLPFSVEADQQGFPTAATDATFVQSPLIGEHSGRRVMGAVAVVGVLAGAWFALAKPVVERAARDAVKGGTSSVQVAPLPGVEAPTDSTVATDGSTPVENVIRGTQAFNRRLVVKVALSASATDQYVVPSGKVLRITDVVLQNPNFDTGPANLSNNDQVLVPWRLENATGNESLPLVSPLVFKGGDKVTFSFTCDSVGDAP-TGSCVPAVLLSGTL 403          
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A6C7EGI5_ILUCY (Uncharacterized protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EGI5_ILUCY)

HSP 1 Score: 183 bits (465), Expect = 1.360e-51
Identity = 118/291 (40.55%), Postives = 155/291 (53.26%), Query Frame = 1
Query:    1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPATVTTIA-----GXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVCTGTV--PGAATCTAALQILG 852
             LQP LR R RANYE M+EN GN  ASCRLRL+D + RVDG FDPPA GV PG ++L+RLK ++ R  + R +RTL F VEA+QPG   A    + VQ P +P  LLGR AAVAL + A    WFG+V+P I+DAA D   DE+ A    +                             EP L+  R+        T   +FTVP+GQ+  ITD+ ++N   D G+ATL  +   +  W L  I G       TP  ++ G  VT+ V C GT+  P   +C  A+ + G
Sbjct:  116 ALQPVLRARHRANYEFMVENHGNGLASCRLRLIDATDRVDGTFDPPAVGVAPGGASLVRLKSKAKRGVFRRSTRTLDFEVEAEQPGHTPASTALSLVQPPTIPGALLGRVAAVALLVGAAALAWFGVVRPEIRDAA-DQRVDEQLARFEGLVEEAQDAGSTAVVVPSTVPTQNPFDTDEGEPDLF--RLTVEPGQDVTADDSFTVPDGQLFDITDIRIENANNDGGSATLSVNGEELFVWNLGNIRGSFFEPTITPKRLEPGDNVTFSVRC-GTIGDPAVGSCANAVNLGG 402          
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A7Y1ZWH2_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZWH2_9ACTN)

HSP 1 Score: 180 bits (456), Expect = 2.660e-50
Identity = 113/288 (39.24%), Postives = 153/288 (53.12%), Query Frame = 1
Query:    1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPATVTTIA--GXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVC--TGTVPGAATCTAALQILG 852
             LQP  R R RA YE M+EN GN  ASCRLRL+D + R+DG FDPPA GV PG   L+RLK R++R  + R +RTL F VEA+Q G   A+A  T VQ P +P   + R AAV   + A    WFG+V+P I+DAA D+  DER A +T                           AEP+ +  R+  +AP  QT  ++ ++P   V  +TDL ++N   + G ATLL +   +  W L  I G+      TPI ++    VT+ V C   G     +TCT A+ + G
Sbjct:  116 TLQPMQRARHRAVYEFMVENHGNGLASCRLRLIDRTNRIDGSFDPPAVGVAPGGGNLVRLKARASRGLFRRSTRTLDFEVEAEQQGHEPAIASLTLVQPPTIPLAAVARVAAVLALVGAAVAAWFGVVRPEIRDAA-DSRVDERIAELTPADPDDPDPPPTTLVDEPAVPTTEVAVAEPTFF--RLSVDAPLTQTADASLSIPATDVFDLTDLRIENSLNESGVATLLLNGDTLFQWSLSNIRGQLFEPNITPIRLEPQDNVTFAVRCDAVGAESSKSTCTTAINLGG 400          
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A662E8U6_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662E8U6_9ACTN)

HSP 1 Score: 176 bits (446), Expect = 8.340e-49
Identity = 108/285 (37.89%), Postives = 153/285 (53.68%), Query Frame = 1
Query:    1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPATVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVCTGTVPGA-ATCTAALQILG 852
             LQP  R R RA +E M+EN GN+ ASCRLRL+D S R+DG FDPPA GV PG+++L+RLK ++ R  + R +RTL F +EA++ G   A    +FVQ+P +P   + R       +  L   WF L+KP I+DAA D V D+R A +   +                       EP+ +  R+       QT   + T+P+G+V  +TD+ L+NP  D+G ATLL +   +  W LD I G+      TPI ++ G  VT+ V C        +TCT A+ I G
Sbjct:  119 ALQPVRRARHRALFEFMVENHGNSLASCRLRLIDASDRIDGTFDPPAVGVAPGSASLVRLKSKARRGVFRRGTRTLDFEIEAERQGHAPASTSLSFVQSPTIPAAAIARTLLAVAILGGLVLAWFALIKPTIEDAASDQV-DDRIAELVAESDDSTATAPATTVPDAESPNTDEGEPTFF--RLTVAPTLTQTADQSETMPDGEVFDMTDVRLENPFNDKGVATLLVNGDQVFIWSLDNIRGQLFEPRITPIRLQPGDNVTFSVRCDEIGDATRSTCTNAINIGG 400          
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A6N2DMD5_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DMD5_9ACTN)

HSP 1 Score: 175 bits (444), Expect = 2.450e-48
Identity = 112/305 (36.72%), Postives = 149/305 (48.85%), Query Frame = 1
Query:    1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADER-------------------PATVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALR-TPIEVKGGQTVTYQVVCTGTVPG-AATCTAALQILG 852
            +LQP  R RRRA +E M+EN GNT ASCRL LVDPS RVDG FDPPA GV PGAS+L+RLK+ +   ++ RR R L F +EA Q     AVA A+ VQ P +P RL+ +   +A  +A   G WFG+V+P ++DAA                           P   TT                             +  R+      G T + + TVP G  L +TD++LQNP  D GTA LLR+  ++  W L  +    +   R TP+    G  V ++  C GT    AA C  A+ + G
Sbjct:  116 LLQPLQRARRRAVFEFMVENHGNTLASCRLHLVDPSSRVDGSFDPPAVGVAPGASSLVRLKVHATSTRFRRRDRQLDFEIEATQSDHQPAVARASLVQPPTIPPRLISQGLLLAAVVALAAGAWFGVVRPELRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPDTTATDEADPAGPDDTSTDRSATPPSGDGAREFAVRLPLQISIGGTNSDSTTVPAGSRLLLTDIVLQNPGADLGTAALLRNSDLLYEWDLGAMSAANEFQPRITPLPFAAGDEVVFRATCDGTTSATAAGCDVAVLLAG 420          
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A848UC59_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UC59_9ACTN)

HSP 1 Score: 160 bits (406), Expect = 7.020e-43
Identity = 106/274 (38.69%), Postives = 137/274 (50.00%), Query Frame = 1
Query:    1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAV------ADERPATVTTIAGXXXXXXXXXXXXXXXXXXXXXA-EPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALR-TPIEVKGGQTVTYQVVC 798
             LQP  RGRRRA YE M+EN GN  ASCRL LVDPS RVDG FDPPA GV PGA++L+RL+L + R  + R  R L F +EA +   P A   AT +Q P +P   L +A  VA  +AA+   W  +V+PAI DAA DAV      AD   AT    A                      + EP  Y  R+  +    Q  + + ++       +TD++ QN  GD GTA LLR+  ++    L  +    +   R TPI    G  V   V C
Sbjct:  116 TLQPVQRGRRRATYEFMVENHGNNLASCRLHLVDPSERVDGTFDPPAVGVAPGAASLVRLRLTAQRSFFRRTERQLDFEIEATEQDHPPATGRATLIQPPTIPAGSLAKALGVAAVVAAIVVAWAAVVRPAIDDAAADAVDERLAGADSSTATTAPEAEPATTTAPPVSAVVAEPITADESGEPVSY--RIAVDVGINQDRSESLSIEPDSEFLLTDVVFQNTNGDLGTAQLLRNGELLYELDLGAMSSANEFQPRVTPIPFGPGDNVVLAVNC 387          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9KJL7_9ACTN2.520e-8250.88Uncharacterized protein n=2 Tax=Actinobacteria Tax... [more]
A0A7K1B7K4_9ACTN7.570e-7049.66Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A539E4H9_9ACTN2.780e-6851.55Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A6I3FB90_9ACTN1.600e-6445.67Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A6I3WSZ4_9ACTN1.760e-6240.83Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A6C7EGI5_ILUCY1.360e-5140.55Uncharacterized protein n=1 Tax=Ilumatobacter cocc... [more]
A0A7Y1ZWH2_9ACTN2.660e-5039.24Uncharacterized protein n=1 Tax=Ilumatobacter sp. ... [more]
A0A662E8U6_9ACTN8.340e-4937.89Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
A0A6N2DMD5_9ACTN2.450e-4836.72Uncharacterized protein n=1 Tax=Ilumatobacter sp. ... [more]
A0A848UC59_9ACTN7.020e-4338.69Uncharacterized protein n=1 Tax=Ilumatobacter sp. ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16197contigP-wetherbeei_contig16197:3..872 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1313172.YM304_37810
PFAMsPG_binding_1,RicinB_lectin_2
Model size870
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categorymitochondrion
Exons1
Evalue2.24e-52
EggNOG OGsCOG1470@1|root,COG1470@2|Bacteria,2H4ZH@201174|Actinobacteria
DescriptionPkd domain containing protein
Cds size870
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186079.657966-CDS-P-wetherbeei_contig16197:2..8721683186079.657966-CDS-P-wetherbeei_contig16197:2..872Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16197 3..872 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16197.1.1prot_P-wetherbeei_contig16197.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16197 3..872 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16197.1.1

>prot_P-wetherbeei_contig16197.1.1 ID=prot_P-wetherbeei_contig16197.1.1|Name=mRNA_P-wetherbeei_contig16197.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=290bp
VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGV
EPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAP
MVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPATVTT
IAGTVTTQAPDDTTPVVDDTVPVVAEPSLYDNRMIANAPAGQTLTSTFTV
PEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRT
PIEVKGGQTVTYQVVCTGTVPGAATCTAALQILGTFTGE*
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mRNA from alignment at P-wetherbeei_contig16197:3..872+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16197.1.1 ID=mRNA_P-wetherbeei_contig16197.1.1|Name=mRNA_P-wetherbeei_contig16197.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=870bp|location=Sequence derived from alignment at P-wetherbeei_contig16197:3..872+ (Phaeothamnion wetherbeei SAG_119_79)
GTCCTCCAGCCGGCCCTGCGCGGCCGCCGTCGCGCCAACTACGAGCTGAT GCTCGAGAACCAGGGCAACACGCAGGCCAGCTGCCGGCTGCGCCTCGTCG ACCCGTCGGGCCGCGTCGACGGCGACTTCGACCCGCCGGCCGCCGGCGTC GAGCCCGGTGCCAGCACGCTGATCCGCCTCAAGCTGCGCTCCAACCGGCG CCAGTGGGAGCGCCGATCGCGCACGTTGGCGTTCACCGTCGAAGCCGACC AGCCGGGCTCGCCCACCGCCGTCGCCCCGGCCACGTTCGTGCAGGCGCCG ATGGTGCCCGAGCGGTTGCTCGGCCGCGCGGCCGCCGTCGCGCTCGGCAT CGCTGCGCTGTTCGGCGTGTGGTTCGGGCTCGTCAAGCCGGCCATCAAGG ACGCCGCTCGCGACGCCGTCGCCGACGAGCGCCCGGCCACCGTCACCACC ATCGCCGGCACCGTCACCACCCAAGCACCCGACGACACCACGCCGGTCGT CGACGACACCGTGCCCGTCGTCGCCGAGCCGTCGCTCTACGACAACCGCA TGATCGCCAACGCACCGGCCGGTCAAACCCTCACGTCGACGTTCACGGTT CCCGAGGGTCAGGTGCTGCGCATCACCGACCTCATCCTCCAGAACCCGGA AGGCGACCAGGGCACCGCCACGCTCCTGCGCGACGACGCGATCATCGGCA ACTGGCGCCTCGACGTGATCTTCGGCGAGCAGCAGACGGCGCTGCGCACC CCGATCGAGGTCAAGGGCGGCCAGACCGTCACCTACCAAGTCGTGTGCAC CGGCACCGTCCCCGGCGCTGCAACGTGCACTGCCGCCCTCCAGATCCTCG GCACCTTCACCGGCGAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16197:3..872+

>mRNA_P-wetherbeei_contig16197.1.1 ID=mRNA_P-wetherbeei_contig16197.1.1|Name=mRNA_P-wetherbeei_contig16197.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=870bp|location=Sequence derived from alignment at P-wetherbeei_contig16197:3..872+ (Phaeothamnion wetherbeei SAG_119_79)
GTCCTCCAGCCGGCCCTGCGCGGCCGCCGTCGCGCCAACTACGAGCTGAT
GCTCGAGAACCAGGGCAACACGCAGGCCAGCTGCCGGCTGCGCCTCGTCG
ACCCGTCGGGCCGCGTCGACGGCGACTTCGACCCGCCGGCCGCCGGCGTC
GAGCCCGGTGCCAGCACGCTGATCCGCCTCAAGCTGCGCTCCAACCGGCG
CCAGTGGGAGCGCCGATCGCGCACGTTGGCGTTCACCGTCGAAGCCGACC
AGCCGGGCTCGCCCACCGCCGTCGCCCCGGCCACGTTCGTGCAGGCGCCG
ATGGTGCCCGAGCGGTTGCTCGGCCGCGCGGCCGCCGTCGCGCTCGGCAT
CGCTGCGCTGTTCGGCGTGTGGTTCGGGCTCGTCAAGCCGGCCATCAAGG
ACGCCGCTCGCGACGCCGTCGCCGACGAGCGCCCGGCCACCGTCACCACC
ATCGCCGGCACCGTCACCACCCAAGCACCCGACGACACCACGCCGGTCGT
CGACGACACCGTGCCCGTCGTCGCCGAGCCGTCGCTCTACGACAACCGCA
TGATCGCCAACGCACCGGCCGGTCAAACCCTCACGTCGACGTTCACGGTT
CCCGAGGGTCAGGTGCTGCGCATCACCGACCTCATCCTCCAGAACCCGGA
AGGCGACCAGGGCACCGCCACGCTCCTGCGCGACGACGCGATCATCGGCA
ACTGGCGCCTCGACGTGATCTTCGGCGAGCAGCAGACGGCGCTGCGCACC
CCGATCGAGGTCAAGGGCGGCCAGACCGTCACCTACCAAGTCGTGTGCAC
CGGCACCGTCCCCGGCGCTGCAACGTGCACTGCCGCCCTCCAGATCCTCG
GCACCTTCACCGGCGAGTAG
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