mRNA_P-wetherbeei_contig16197.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A7X9KJL7_9ACTN (Uncharacterized protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KJL7_9ACTN) HSP 1 Score: 262 bits (670), Expect = 2.520e-82 Identity = 145/285 (50.88%), Postives = 184/285 (64.56%), Query Frame = 1
Query: 1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPATVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVCTG-TVPGAATCTAALQILG 852
VLQPALRGRR A YE+MLEN+GNT ASCRL L+DPSGRV+ DFDPPAAGVEPGASTLIR+K+RS QWERR RT+ F ++ADQPGSPTA ATFVQ P+VPERL+GR A+ +A G WFG+VKPAI+DAA DAV PAT T++ + ++ + + P GQT + +TVP GQ LRITD+I+QNP D G+ + R+D + + L IFG+ L TPIE+ G+ + QV CTG P +TC+ + + G
Sbjct: 116 VLQPALRGRRSATYEMMLENRGNTLASCRLHLIDPSGRVEADFDPPAAGVEPGASTLIRMKVRSKGFQWERRPRTVPFRIDADQPGSPTASGSATFVQTPIVPERLVGRLIALITLVAVALGSWFGVVKPAIRDAADDAVRVAMPATTTSVVATIDSATGATVAPSVPEED----QGTIVNIPLPLAVPVGQTDAARYTVPAGQRLRITDIIVQNPNIDLGSLIIQRNDVTLYTFSLGNIFGDTSAPLITPIELLAGEQLVVQVTCTGLNDPTFSTCSQNVFVSG 396
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A7K1B7K4_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B7K4_9ACTN) HSP 1 Score: 231 bits (588), Expect = 7.570e-70 Identity = 148/298 (49.66%), Postives = 189/298 (63.42%), Query Frame = 1
Query: 1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVAD-ERPA-TVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLY---DNRMIANAPAG---QTLTS--TFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFG-EQQTALRTPIEVKGGQTVTYQVVCTGTV-PGAATCTAALQILGTF 858
+LQPALR RRRA +E+M+EN+GN QASCR+ L+DP+ R+DGDFDPPA G+EPG S L+R+KL++ R QWERR+RT+ F V+ADQ G+PTA A TFVQ P++P+RL R AV L AL G WFGLV+PAI DAA DAVA E P TV T A XXXXXXX ++ ++R++A P+G QT T+TVP G+ ITDL ++NP D+GTA L LD G + + RTPIE++ G+TV++QV C PGAA CT I GT
Sbjct: 116 LLQPALRSRRRATFEVMVENKGNAQASCRMHLIDPTQRLDGDFDPPAIGIEPGGSQLVRMKLKATRNQWERRARTIPFRVDADQQGAPTASATGTFVQGPVLPDRLGVRLGAVVLVAGALLGAWFGLVRPAIDDAAADAVAGIELPEITVATTAAPAVTIAEQGDGSEXXXXXXXTGTNAVVPAGESRLVA-LPSGVPAQTTNEPQTYTVPAGKRFLITDLTMRNPFSDEGTAVLTVGTTSFEFDLLDYARGLDWSRSFRTPIELRAGETVSFQVTCNAVGRPGAAGCTPTATINGTL 412
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A539E4H9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E4H9_9ACTN) HSP 1 Score: 227 bits (579), Expect = 2.780e-68 Identity = 150/291 (51.55%), Postives = 188/291 (64.60%), Query Frame = 1
Query: 1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVAD-ERPATVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTL----TSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTA-LRTPIEVKGGQTVTYQVVCTGTV-PGAATCTAALQILG 852
+LQPA+R RR+A YE+M+EN+GNTQASCR+ L+DP+GR+DGDFDPPAAGVEPG +TL+RLKLR+ +RQWERRSR + F VEADQ G+PTA A+F+QAPMVPERL R AA AL + AL G W+G+V+PAI DAA AVA + XXXXXXXXXXXXXXXXXX +L P G L T T+T P+ +TD +QNP GD+GTAT+ + W L + G T TP+ V G+ V ++V C GAA C+A + G
Sbjct: 140 MLQPAIRSRRKATYEMMVENRGNTQASCRMHLIDPTGRLDGDFDPPAAGVEPGGTTLVRLKLRATKRQWERRSRAIPFRVEADQQGAPTADTAASFIQAPMVPERLWARVAAAALLVGALAGTWYGVVRPAIDDAAASAVAAIGQXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGALEGEPFSVGLPGGAALNEISTQTYTAPDDSAFLVTDFFVQNPFGDEGTATMTVG-TVSFEWDLVNLDGIDATKQFVTPLRVLAGEQVVFEVTCASIGRQGAAACSAKAVVNG 429
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A6I3FB90_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3FB90_9ACTN) HSP 1 Score: 216 bits (551), Expect = 1.600e-64 Identity = 132/289 (45.67%), Postives = 174/289 (60.21%), Query Frame = 1
Query: 1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAAL--FGVWFGLVKPAIKDAARDAVADERPATVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIAN------APAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVCTGTVPGAATCTAALQ 843
+LQP RGR +E++L+N+GNT+ SCR+ L++P+GRV FDP AGVEPG STLIR ++R++ QW+R+ RT+ F ++AD+PG+PTA A TFVQAPMVPERL G AA A G+ AL FG WF +VKPA++DAA AVA P+T TT AG S D+ I N P G+T ++TVP GQ L +TD+++QNP GDQGT + R+D + ++RLD I G+ L TPIE G + V C G G AT T Q
Sbjct: 116 LLQPVQRGRYSTTFEMLLQNRGNTRTSCRMHLLEPTGRVAATFDPGTAGVEPGTSTLIRARVRAHGVQWQRQPRTVTFRIDADEPGTPTASASGTFVQAPMVPERL-GVWAAGAAGVVALALFG-WFLVVKPAVRDAADRAVATALPST-TTAAGSPTDTGPA-------------TSTSGNDSGTIVNIPIPVATPVGETAALSYTVPAGQRLHVTDIVVQNPNGDQGTLFVQRNDITLYSFRLDNILGDTSVPLVTPIEFFAGDQLVVTVTCGGV--GNATATTCTQ 386
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A6I3WSZ4_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3WSZ4_9ACTN) HSP 1 Score: 211 bits (538), Expect = 1.760e-62 Identity = 118/289 (40.83%), Postives = 159/289 (55.02%), Query Frame = 1
Query: 1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPAT-VTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVC--TGTVPGAATCTAALQILGTF 858
+LQP LRGRRRA +E ++EN GN QASCRL L+D + R+DG FDPPA G+EPGA +L+RL+L+S RQ SRTL F+VEADQ G PTA ATFVQ+P++ E R + L G WF L KP ++ AARDAV + V + G ++ R++ + T + VP G+VLRITD++LQNP D G A L +D ++ WRL+ G + L +P+ KGG VT+ C G P +C A+ + GT
Sbjct: 116 MLQPVLRGRRRATFEFLVENHGNLQASCRLHLIDTTQRLDGAFDPPAIGIEPGAKSLVRLRLKSLHRQMSGESRTLPFSVEADQQGFPTAATDATFVQSPLIGEHSGRRVMGAVAVVGVLAGAWFALAKPVVERAARDAVKGGTSSVQVAPLPGVEAPTDSTVATDGSTPVENVIRGTQAFNRRLVVKVALSASATDQYVVPSGKVLRITDVVLQNPNFDTGPANLSNNDQVLVPWRLENATGNESLPLVSPLVFKGGDKVTFSFTCDSVGDAP-TGSCVPAVLLSGTL 403
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A6C7EGI5_ILUCY (Uncharacterized protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EGI5_ILUCY) HSP 1 Score: 183 bits (465), Expect = 1.360e-51 Identity = 118/291 (40.55%), Postives = 155/291 (53.26%), Query Frame = 1
Query: 1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPATVTTIA-----GXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVCTGTV--PGAATCTAALQILG 852
LQP LR R RANYE M+EN GN ASCRLRL+D + RVDG FDPPA GV PG ++L+RLK ++ R + R +RTL F VEA+QPG A + VQ P +P LLGR AAVAL + A WFG+V+P I+DAA D DE+ A + EP L+ R+ T +FTVP+GQ+ ITD+ ++N D G+ATL + + W L I G TP ++ G VT+ V C GT+ P +C A+ + G
Sbjct: 116 ALQPVLRARHRANYEFMVENHGNGLASCRLRLIDATDRVDGTFDPPAVGVAPGGASLVRLKSKAKRGVFRRSTRTLDFEVEAEQPGHTPASTALSLVQPPTIPGALLGRVAAVALLVGAAALAWFGVVRPEIRDAA-DQRVDEQLARFEGLVEEAQDAGSTAVVVPSTVPTQNPFDTDEGEPDLF--RLTVEPGQDVTADDSFTVPDGQLFDITDIRIENANNDGGSATLSVNGEELFVWNLGNIRGSFFEPTITPKRLEPGDNVTFSVRC-GTIGDPAVGSCANAVNLGG 402
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A7Y1ZWH2_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZWH2_9ACTN) HSP 1 Score: 180 bits (456), Expect = 2.660e-50 Identity = 113/288 (39.24%), Postives = 153/288 (53.12%), Query Frame = 1
Query: 1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPATVTTIA--GXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVC--TGTVPGAATCTAALQILG 852
LQP R R RA YE M+EN GN ASCRLRL+D + R+DG FDPPA GV PG L+RLK R++R + R +RTL F VEA+Q G A+A T VQ P +P + R AAV + A WFG+V+P I+DAA D+ DER A +T AEP+ + R+ +AP QT ++ ++P V +TDL ++N + G ATLL + + W L I G+ TPI ++ VT+ V C G +TCT A+ + G
Sbjct: 116 TLQPMQRARHRAVYEFMVENHGNGLASCRLRLIDRTNRIDGSFDPPAVGVAPGGGNLVRLKARASRGLFRRSTRTLDFEVEAEQQGHEPAIASLTLVQPPTIPLAAVARVAAVLALVGAAVAAWFGVVRPEIRDAA-DSRVDERIAELTPADPDDPDPPPTTLVDEPAVPTTEVAVAEPTFF--RLSVDAPLTQTADASLSIPATDVFDLTDLRIENSLNESGVATLLLNGDTLFQWSLSNIRGQLFEPNITPIRLEPQDNVTFAVRCDAVGAESSKSTCTTAINLGG 400
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A662E8U6_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662E8U6_9ACTN) HSP 1 Score: 176 bits (446), Expect = 8.340e-49 Identity = 108/285 (37.89%), Postives = 153/285 (53.68%), Query Frame = 1
Query: 1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADERPATVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALRTPIEVKGGQTVTYQVVCTGTVPGA-ATCTAALQILG 852
LQP R R RA +E M+EN GN+ ASCRLRL+D S R+DG FDPPA GV PG+++L+RLK ++ R + R +RTL F +EA++ G A +FVQ+P +P + R + L WF L+KP I+DAA D V D+R A + + EP+ + R+ QT + T+P+G+V +TD+ L+NP D+G ATLL + + W LD I G+ TPI ++ G VT+ V C +TCT A+ I G
Sbjct: 119 ALQPVRRARHRALFEFMVENHGNSLASCRLRLIDASDRIDGTFDPPAVGVAPGSASLVRLKSKARRGVFRRGTRTLDFEIEAERQGHAPASTSLSFVQSPTIPAAAIARTLLAVAILGGLVLAWFALIKPTIEDAASDQV-DDRIAELVAESDDSTATAPATTVPDAESPNTDEGEPTFF--RLTVAPTLTQTADQSETMPDGEVFDMTDVRLENPFNDKGVATLLVNGDQVFIWSLDNIRGQLFEPRITPIRLQPGDNVTFSVRCDEIGDATRSTCTNAINIGG 400
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A6N2DMD5_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DMD5_9ACTN) HSP 1 Score: 175 bits (444), Expect = 2.450e-48 Identity = 112/305 (36.72%), Postives = 149/305 (48.85%), Query Frame = 1
Query: 1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAVADER-------------------PATVTTIAGXXXXXXXXXXXXXXXXXXXXXAEPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALR-TPIEVKGGQTVTYQVVCTGTVPG-AATCTAALQILG 852
+LQP R RRRA +E M+EN GNT ASCRL LVDPS RVDG FDPPA GV PGAS+L+RLK+ + ++ RR R L F +EA Q AVA A+ VQ P +P RL+ + +A +A G WFG+V+P ++DAA P TT + R+ G T + + TVP G L +TD++LQNP D GTA LLR+ ++ W L + + R TP+ G V ++ C GT AA C A+ + G
Sbjct: 116 LLQPLQRARRRAVFEFMVENHGNTLASCRLHLVDPSSRVDGSFDPPAVGVAPGASSLVRLKVHATSTRFRRRDRQLDFEIEATQSDHQPAVARASLVQPPTIPPRLISQGLLLAAVVALAAGAWFGVVRPELRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPDTTATDEADPAGPDDTSTDRSATPPSGDGAREFAVRLPLQISIGGTNSDSTTVPAGSRLLLTDIVLQNPGADLGTAALLRNSDLLYEWDLGAMSAANEFQPRITPLPFAAGDEVVFRATCDGTTSATAAGCDVAVLLAG 420
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Match: A0A848UC59_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UC59_9ACTN) HSP 1 Score: 160 bits (406), Expect = 7.020e-43 Identity = 106/274 (38.69%), Postives = 137/274 (50.00%), Query Frame = 1
Query: 1 VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVEPGASTLIRLKLRSNRRQWERRSRTLAFTVEADQPGSPTAVAPATFVQAPMVPERLLGRAAAVALGIAALFGVWFGLVKPAIKDAARDAV------ADERPATVTTIAGXXXXXXXXXXXXXXXXXXXXXA-EPSLYDNRMIANAPAGQTLTSTFTVPEGQVLRITDLILQNPEGDQGTATLLRDDAIIGNWRLDVIFGEQQTALR-TPIEVKGGQTVTYQVVC 798
LQP RGRRRA YE M+EN GN ASCRL LVDPS RVDG FDPPA GV PGA++L+RL+L + R + R R L F +EA + P A AT +Q P +P L +A VA +AA+ W +V+PAI DAA DAV AD AT A + EP Y R+ + Q + + ++ +TD++ QN GD GTA LLR+ ++ L + + R TPI G V V C
Sbjct: 116 TLQPVQRGRRRATYEFMVENHGNNLASCRLHLVDPSERVDGTFDPPAVGVAPGAASLVRLRLTAQRSFFRRTERQLDFEIEATEQDHPPATGRATLIQPPTIPAGSLAKALGVAAVVAAIVVAWAAVVRPAIDDAAADAVDERLAGADSSTATTAPEAEPATTTAPPVSAVVAEPITADESGEPVSY--RIAVDVGINQDRSESLSIEPDSEFLLTDVVFQNTNGDLGTAQLLRNGELLYELDLGAMSSANEFQPRVTPIPFGPGDNVVLAVNC 387 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16197.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16197.1.1 >prot_P-wetherbeei_contig16197.1.1 ID=prot_P-wetherbeei_contig16197.1.1|Name=mRNA_P-wetherbeei_contig16197.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=290bp VLQPALRGRRRANYELMLENQGNTQASCRLRLVDPSGRVDGDFDPPAAGVback to top mRNA from alignment at P-wetherbeei_contig16197:3..872+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16197.1.1 ID=mRNA_P-wetherbeei_contig16197.1.1|Name=mRNA_P-wetherbeei_contig16197.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=870bp|location=Sequence derived from alignment at P-wetherbeei_contig16197:3..872+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16197:3..872+ >mRNA_P-wetherbeei_contig16197.1.1 ID=mRNA_P-wetherbeei_contig16197.1.1|Name=mRNA_P-wetherbeei_contig16197.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=870bp|location=Sequence derived from alignment at P-wetherbeei_contig16197:3..872+ (Phaeothamnion wetherbeei SAG_119_79)back to top |