mRNA_P-wetherbeei_contig16194.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16194.1.1
Unique NamemRNA_P-wetherbeei_contig16194.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Match: A0A7X1NZ76_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1NZ76_9PROT)

HSP 1 Score: 263 bits (673), Expect = 9.700e-84
Identity = 142/287 (49.48%), Postives = 189/287 (65.85%), Query Frame = 1
Query:    1 PTAPGGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPADGYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSMPATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPFKGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPDVPTFIESGLH-IEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETLLKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAK 858
            P +PGG+ + +AR+ A   +  LGQ V+VD+R GA G V T  AA AP DGYT+L+  ++   +N SLY  KLPYD LK F PVSLI   P +L V+P++P  ++K+LI+ AK    KLN+GS G GTT HL GE+LK  AG+ +THVP+KG GPAL  L+   + +ML   P+ L   +AG+LR LA SG  R+P++PD+PT  E+GL   EI  W  +  PAGTPPAIVK +HA  V  L  P+V E L  +GA P  +SPAE   F+RAEI K+A +++ AG K
Sbjct:   43 PFSPGGSNDIMARIAAQNFTAGLGQQVIVDNRPGASGIVGTELAAKAPPDGYTLLMMSLT-FTVNPSLY-RKLPYDTLKDFIPVSLIASAPLMLVVNPALPVKSLKELIDYAKANPGKLNFGSGGRGTTPHLAGEMLKAMAGLQMTHVPYKGGGPALADLVGGQIQLMLENIPSTLPFVKAGKLRALAVSGKKRSPLVPDLPTLDEAGLKGYEIVGWNGLFFPAGTPPAIVKTIHAQTVKMLAQPDVKERLATLGAEPVGNSPAEFAAFVRAEIAKWARIVKQAGLK 327          
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Match: A0A1F4CNX5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CNX5_9PROT)

HSP 1 Score: 259 bits (663), Expect = 2.520e-82
Identity = 131/287 (45.64%), Postives = 189/287 (65.85%), Query Frame = 1
Query:    1 PTAPGGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPADGYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSMPATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPFKGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPDVPTFIESG-LHIEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETLLKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAK 858
            P APGGT+E + R+IA K+SE LGQ +VVD+R GA G + T   ANA  DGYT+L   +SP+ INVS+   KLPYDP K  AP+S+ITKVP V +V    P   +K LI  AK    KL+YGS+G+G+  HL+ EL K  AGI + HVPFKG+G  L AL S ++ ++ + PPAVL   ++G  R +A S  TR+P +PD P+  ESG L  ++++WYC++ PAG P  I+ ++ + LV ++ +  V+E L+  GA P  ++P EL   +  ++K++A+ +E+AG K
Sbjct:   35 PFAPGGTSEVLGRIIAQKMSEHLGQQIVVDTRPGASGGLGTTLTANATPDGYTLLFTSLSPIVINVSVQKGKLPYDPEKDLAPISVITKVPSVFAVQADFPHRTVKDLIAFAKANPGKLSYGSSGTGSVNHLIVELFKSAAGIEMLHVPFKGAGQGLIALRSKEINMISAAPPAVLPHIRSGVFRAIAVSSATRSPALPDTPSISESGILGFDVSAWYCLMGPAGIPRPIIDKVRSTLVKTITTAPVSEHLIAQGAAPAPTTPEELAKLINGDLKRWAKAVEVAGLK 321          
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Match: B3RC55_CUPTR (Uncharacterized protein n=20 Tax=Cupriavidus TaxID=106589 RepID=B3RC55_CUPTR)

HSP 1 Score: 257 bits (657), Expect = 2.030e-81
Identity = 131/289 (45.33%), Postives = 189/289 (65.40%), Query Frame = 1
Query:    1 PTAPGGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPADGYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSMPATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPFKGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPDVPTFIESGLH-IEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETLLKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAKID 864
            P  PGGT + + RV+A +LSETLGQ VVVD+R GAGGT+ +   A +PADGYT++ G V   +IN +LY  KLP+DP K F+PV+L   VP +L V+P++PA N+++L+  AK    KLN GSAG+GTT HL GEL K  AG+ + HVP+KGSGPA+  LL+N V +M    P  L   +AGRLR LA +  TR+P +PDVPT  E+G+   E   W+ +V P G PP +  +L   +    +   + + L++ GA P  S+P + +V +R +  K+A++++ +GA +D
Sbjct:   35 PFPPGGTTDLLGRVLATRLSETLGQQVVVDNRPGAGGTIGSDLVAKSPADGYTLMFGTVGTQSINATLY-KKLPFDPQKDFSPVALFAGVPNILVVNPNVPARNVRELVSYAKANPGKLNMGSAGNGTTNHLSGELFKSMAGVQVVHVPYKGSGPAMADLLANQVQLMFDNLPGSLPHVKAGRLRALAVTSATRSPALPDVPTMAEAGIAGYEADVWFGVVGPRGLPPEVSSRLSQEITRIAQDKAMRDKLVQAGAAPLTSTPEQFSVLIRRDTDKWAKLVQASGASVD 322          
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Match: UPI00199BE7BB (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI00199BE7BB)

HSP 1 Score: 255 bits (652), Expect = 1.270e-80
Identity = 134/289 (46.37%), Postives = 195/289 (67.47%), Query Frame = 1
Query:    1 PTAPGGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPADGYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSMPATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPFKGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPDVPTFIESGLH-IEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETLLKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAKID 864
            P  PGG  + IAR +A +LSE L Q VV+D+RGGAGG + T  AA    DGYT+++G  + +AIN SLY AKL +DP++ F P+SL+   P +++VHPSMP   +++LI LA+  R  +NYGSAG+GTT HL GELL+  A I L H+P+KG+  ALTAL+  +  +ML+    VL   QAG+LR LA +   R+ V+PD+PT  ESGL   E + WY +++P G  P IV +L+  +V  LK PEV++ L + G+    SS +E + +L++EI K+A+V++ +GA++D
Sbjct:   39 PYPPGGGVDAIARAVAPRLSERLAQPVVIDNRGGAGGNIGTEIAARTAPDGYTLMMGAAA-LAINASLY-AKLSFDPVRDFTPISLLASTPNIVTVHPSMPVKTLRELIALARTTRGGINYGSAGNGTTSHLAGELLRSMAKIDLVHIPYKGTTGALTALVGGEAPLMLAPALTVLPQIQAGKLRALAITSSKRSSVLPDLPTVAESGLPGFEASQWYGVLLPVGAAPEIVDRLNREIVAVLKLPEVSQALARDGSILVGSSASEFSTYLKSEIDKWAKVVKASGARVD 325          
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Match: A0A536TWK9_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TWK9_9PROT)

HSP 1 Score: 255 bits (651), Expect = 1.910e-80
Identity = 132/285 (46.32%), Postives = 187/285 (65.61%), Query Frame = 1
Query:   13 GGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPADGYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSMPATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPFKGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPDVPTFIESGLH-IEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETLLKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAKID 864
            GGT + +AR +  +LS TLGQ VV+D+R GA G +     A +  DGYT+L+G V   AIN SLY AK+PYD +K FAPV L+  VP VL V+P++P  ++  LI+LAK    ++N+ S+GSGT+ HL GEL K  AG+ +THVP+KGS PA+T L+   V +M    P+ L   +AG+LR +A +   R P +PDVPT  ESGL   E +SW+ +V PAGTPPAI+ +++  +   L+S E  E LL  GA P   +P +    +RAE +K+A+V++ +GAK+D
Sbjct:   44 GGTTDILAREVGQRLSMTLGQPVVIDNRPGAAGNIGADLVAKSAPDGYTLLMGTVGTHAINASLY-AKMPYDHVKDFAPVILVAGVPNVLEVNPALPVNSVADLIKLAKAKPGQINFASSGSGTSIHLSGELFKTMAGVDMTHVPYKGSAPAITDLIGGQVQVMFDNLPSSLQFIKAGKLRAIAVTSAKRAPALPDVPTIAESGLPGFEASSWFGIVAPAGTPPAIIARINNDVDQWLQSSEAKEKLLAQGAIPAGGTPEQFAAHIRAETEKWAKVVKASGAKVD 327          
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Match: A0A4U8VG37_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Burkholderiaceae bacterium PBA TaxID=795666 RepID=A0A4U8VG37_9BURK)

HSP 1 Score: 254 bits (650), Expect = 3.260e-80
Identity = 128/289 (44.29%), Postives = 194/289 (67.13%), Query Frame = 1
Query:    1 PTAPGGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPADGYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSMPATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPFKGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPDVPTFIESGLH-IEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETLLKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAKID 864
            P + GGT + +AR++ +KL ETLG++V++D+R GAGG +  A  A A  DGYT+L+G V   AIN +LY  KL +DP+K FAP++ +  +P +L VHPS+PA N+++LI  AK    KLN+GS+G+G++ HL GEL K   GI + HVP+KGS PA+T LL   + +M    P+ +   ++G+LR LA +   R+P +P+VPT  ESG+   E TSW+ ++ PAGTPPAI+ +L+A LV  L  P+V + + + GA     +PA    F+++E  K+A+V++ +GA +D
Sbjct:   46 PFSAGGTTDILARIVGVKLGETLGETVIIDNRPGAGGNIGAAMVAKAKPDGYTLLMGTVGTHAINQTLY-PKLNFDPIKDFAPLTRVANLPNLLVVHPSVPAKNVQELIAYAKANPGKLNFGSSGNGSSIHLSGELFKNMTGIDMQHVPYKGSAPAVTDLLGGQISMMFDNMPSAIQHVKSGKLRPLAVTTAKRSPALPNVPTIAESGVKGYEATSWFGLLAPAGTPPAIINRLNADLVKILAMPDVKKQMAEQGAEAYSETPAAFAGFIKSETAKWAKVVKASGAVVD 333          
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Match: A0A7X3HNV2_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=3 Tax=Cupriavidus TaxID=106589 RepID=A0A7X3HNV2_9BURK)

HSP 1 Score: 254 bits (650), Expect = 3.360e-80
Identity = 128/289 (44.29%), Postives = 190/289 (65.74%), Query Frame = 1
Query:    1 PTAPGGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPADGYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSMPATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPFKGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPDVPTFIESGLH-IEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETLLKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAKID 864
            P + GGT + +AR+++L+L + LGQ VVVD+R GAGG +  + AA APADGYT+ +G +   AIN SLY +KLP+DP+K FAP++ I  VP ++ V+P +P  NIK+LI   K    KL+YGS+GSG++ HL GEL     G+ + H+P+KGS PA+  LL N +G+M    P+     +AG+LR LA +   R+P +PDVPT  E+G+   E TSW+ +    GTP  IV +++A +V  L  PEV + + + GA P    PA+L  F+++E  K+A+V++ +GA +D
Sbjct:   47 PFSAGGTTDILARIVSLQLGKALGQPVVVDNRPGAGGNIGASLAAKAPADGYTLFMGTIGTHAINQSLY-SKLPFDPVKDFAPITRIAMVPNIVVVNPKVPVHNIKELIAYVKANPDKLSYGSSGSGSSMHLSGELFNSMTGLHIQHIPYKGSAPAVNDLLGNQIGLMFDNLPSSFQHVKAGKLRALAVTSGKRSPALPDVPTVAEAGVPGYEATSWFALYATGGTPQPIVDRINAEVVKILAMPEVKKQMAEQGAEPNPEKPAQLAAFMKSEATKWAKVVKASGATVD 334          
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Match: UPI0019AB5865 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019AB5865)

HSP 1 Score: 254 bits (648), Expect = 6.530e-80
Identity = 127/287 (44.25%), Postives = 191/287 (66.55%), Query Frame = 1
Query:    1 PTAPGGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPADGYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSMPATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPFKGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPDVPTFIESGLH-IEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETLLKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAK 858
            P APGGT + I R++A K  E LGQS+V D+R GAGG + +A  A A  DGYT+LLG +  +A+N +LY +KLPYDPL+ F P++L+ ++P +L+V+P++P   + +LI LAK     ++YGS G G  GHL  E L   A + LTHVP++G+GPA+  ++S  + ++L+G PA++   ++G+LR +A SG TR  V+P++PT +ESGL   E T WY +V P  TP  I+++LH+A+  ++ SPE+ E     GA    S+P E   F+R EI ++A VI+ AG +
Sbjct:   47 PFAPGGTNDIIGRLVAQKAGENLGQSIVADNRAGAGGLIGSAAVAKATPDGYTLLLGHIGTLAVNPTLY-SKLPYDPLRDFIPITLVARLPNLLAVNPAVPVKTLAELIALAKAKPGAVSYGSGGVGGAGHLASEYLGLLAAVKLTHVPYRGTGPAVVDVVSGQLSMVLAGVPAIVPHVRSGQLRAIAVSGPTRLKVLPEIPTMMESGLPGYEATQWYGIVAPTSTPGRIIERLHSAITSAVMSPEIVERFAADGAEAAISTPEEFNAFIRKEIARWAPVIKAAGIR 332          
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Match: UPI00157AC0EB (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Cupriavidus basilensis TaxID=68895 RepID=UPI00157AC0EB)

HSP 1 Score: 254 bits (648), Expect = 7.840e-80
Identity = 127/289 (43.94%), Postives = 186/289 (64.36%), Query Frame = 1
Query:    1 PTAPGGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPADGYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSMPATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPFKGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPDVPTFIESGLH-IEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETLLKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAKID 864
            P + GGT + +AR++ L+L + LGQ VV+D+R GAGG +  + AA AP DGYT+ +G +   AIN SLY +KLP+DP+K FAP+S +  VP ++ V+P +P  NIK+LI   K    KL+YGS+GSG++ HL GEL     G+ + H+P+KGS PA+  LL N +G+M    P+     +AG+LR +A +   R+P +P+VPT  ESG+   E TSW+ +    GTP  IV +L+A +V  L  PEV + +   GA P    PAEL  F++ E  K+A+V++ +GA +D
Sbjct:   52 PFSAGGTTDILARIVGLQLGKALGQPVVIDNRPGAGGNIGASIAAKAPGDGYTLFMGTIGTHAINQSLY-SKLPFDPVKDFAPISRVAMVPNIVVVNPKVPVNNIKELIAYVKANPDKLSYGSSGSGSSMHLSGELFNAMTGLHIQHIPYKGSAPAVNDLLGNQIGLMFDNMPSSYPHVKAGKLRAIAVTSAKRSPALPNVPTVAESGVPGYEATSWFALYATGGTPQPIVDRLNAEVVKILAMPEVKKQMADQGAEPHPEKPAELAAFMKTETAKWAKVVKASGATVD 339          
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Match: A0A3G8H7Y0_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=6 Tax=Cupriavidus TaxID=106589 RepID=A0A3G8H7Y0_9BURK)

HSP 1 Score: 253 bits (647), Expect = 9.530e-80
Identity = 128/289 (44.29%), Postives = 190/289 (65.74%), Query Frame = 1
Query:    1 PTAPGGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPADGYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSMPATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPFKGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPDVPTFIESGLH-IEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETLLKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAKID 864
            P + GGT + +AR+++L+L + LGQSVVVD+R GAGG +  + AA APADGYT+ +G +   AIN SLY +KLP+DP+K FAP++ +  VP ++ V+P +P  NIK+LI   K    KL+YGS+GSG++ HL GEL     G+ + H+P+KGS PA+  LL N +G+M    P+     +AG+LR LA +   R+P +PDVPT  E+G+   E TSW+ +    GTP  IV +L+A +V  L  PEV + + + GA      PA+L  F+++E  K+A+V++ +GA +D
Sbjct:   47 PFSAGGTTDILARIVSLQLGKALGQSVVVDNRPGAGGNIGASLAAKAPADGYTLFMGTIGTHAINQSLY-SKLPFDPVKDFAPITRVAMVPNIVVVNPKVPVHNIKELIAYVKANPDKLSYGSSGSGSSMHLSGELFNSMTGLHIQHIPYKGSAPAVNDLLGNQIGLMFDNLPSSYPHVKAGKLRALAVTSGKRSPALPDVPTVAEAGVPGYEATSWFALYATGGTPQPIVDRLNAEVVKILAMPEVKKQMAEQGAEANPEKPAQLAAFMKSEAAKWAKVVKASGATVD 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16194.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X1NZ76_9PROT9.700e-8449.48Tripartite tricarboxylate transporter substrate bi... [more]
A0A1F4CNX5_9PROT2.520e-8245.64Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
B3RC55_CUPTR2.030e-8145.33Uncharacterized protein n=20 Tax=Cupriavidus TaxID... [more]
UPI00199BE7BB1.270e-8046.37Tripartite tricarboxylate transporter substrate bi... [more]
A0A536TWK9_9PROT1.910e-8046.32Tripartite tricarboxylate transporter substrate bi... [more]
A0A4U8VG37_9BURK3.260e-8044.29Tripartite tricarboxylate transporter substrate bi... [more]
A0A7X3HNV2_9BURK3.360e-8044.29Tripartite tricarboxylate transporter substrate bi... [more]
UPI0019AB58656.530e-8044.25Tripartite tricarboxylate transporter substrate bi... [more]
UPI00157AC0EB7.840e-8043.94tripartite tricarboxylate transporter substrate bi... [more]
A0A3G8H7Y0_9BURK9.530e-8044.29Tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16194contigP-wetherbeei_contig16194:1..867 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1217718.ALOU01000051_gene3011
PFAMsTctC
Model size867
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.41e-82
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VHK8@28216|Betaproteobacteria
Descriptionprotein conserved in bacteria
Cds size867
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186079.63442-CDS-P-wetherbeei_contig16194:0..8671683186079.63442-CDS-P-wetherbeei_contig16194:0..867Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16194 1..867 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16194.1.1prot_P-wetherbeei_contig16194.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16194 1..867 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16194.1.1

>prot_P-wetherbeei_contig16194.1.1 ID=prot_P-wetherbeei_contig16194.1.1|Name=mRNA_P-wetherbeei_contig16194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp
PTAPGGTAEPIARVIALKLSETLGQSVVVDSRGGAGGTVATATAANAPAD
GYTILLGVVSPMAINVSLYGAKLPYDPLKSFAPVSLITKVPQVLSVHPSM
PATNIKQLIELAKDPRSKLNYGSAGSGTTGHLVGELLKKRAGIPLTHVPF
KGSGPALTALLSNDVGIMLSGPPAVLALSQAGRLRVLATSGVTRTPVMPD
VPTFIESGLHIEITSWYCMVVPAGTPPAIVKQLHAALVDSLKSPEVAETL
LKMGAPPEWSSPAELTVFLRAEIKKFAEVIEIAGAKID*
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mRNA from alignment at P-wetherbeei_contig16194:1..867+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16194.1.1 ID=mRNA_P-wetherbeei_contig16194.1.1|Name=mRNA_P-wetherbeei_contig16194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig16194:1..867+ (Phaeothamnion wetherbeei SAG_119_79)
CCGACAGCGCCCGGCGGCACTGCCGAGCCGATTGCGCGGGTGATTGCCCT CAAGCTTTCGGAGACTCTGGGGCAAAGCGTGGTCGTCGACAGCCGCGGCG GCGCCGGCGGTACGGTCGCGACGGCAACGGCGGCGAACGCGCCGGCGGAC GGCTACACGATATTGCTGGGCGTCGTGTCGCCGATGGCGATCAACGTGTC GCTGTACGGCGCCAAGCTGCCCTACGATCCGCTCAAGAGTTTTGCGCCGG TCTCGCTGATCACCAAGGTGCCGCAGGTATTGTCCGTGCACCCGTCAATG CCGGCCACCAATATCAAACAACTGATCGAACTCGCGAAGGACCCGCGCAG CAAGCTGAATTACGGTTCCGCCGGCAGCGGCACTACCGGGCACCTCGTCG GCGAGCTGCTGAAAAAGCGCGCCGGCATCCCGCTCACGCACGTTCCGTTC AAAGGCTCGGGACCGGCATTAACCGCGCTGTTGTCCAACGATGTGGGCAT CATGCTGTCAGGCCCGCCGGCCGTGCTCGCGCTGTCCCAGGCGGGACGCC TGCGCGTGCTTGCGACTTCCGGCGTCACGCGCACGCCGGTCATGCCGGAC GTTCCCACGTTCATCGAGTCCGGCCTGCACATCGAAATCACATCATGGTA TTGCATGGTCGTGCCGGCGGGCACGCCGCCAGCCATCGTCAAACAGCTTC ATGCCGCGCTGGTAGACAGCCTCAAAAGCCCGGAAGTGGCGGAGACCCTG CTCAAGATGGGCGCCCCTCCCGAATGGTCGAGCCCCGCAGAACTGACCGT ATTCCTGCGCGCGGAAATCAAAAAGTTCGCGGAAGTCATCGAGATCGCGG GCGCGAAAATCGATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16194:1..867+

>mRNA_P-wetherbeei_contig16194.1.1 ID=mRNA_P-wetherbeei_contig16194.1.1|Name=mRNA_P-wetherbeei_contig16194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig16194:1..867+ (Phaeothamnion wetherbeei SAG_119_79)
CCGACAGCGCCCGGCGGCACTGCCGAGCCGATTGCGCGGGTGATTGCCCT
CAAGCTTTCGGAGACTCTGGGGCAAAGCGTGGTCGTCGACAGCCGCGGCG
GCGCCGGCGGTACGGTCGCGACGGCAACGGCGGCGAACGCGCCGGCGGAC
GGCTACACGATATTGCTGGGCGTCGTGTCGCCGATGGCGATCAACGTGTC
GCTGTACGGCGCCAAGCTGCCCTACGATCCGCTCAAGAGTTTTGCGCCGG
TCTCGCTGATCACCAAGGTGCCGCAGGTATTGTCCGTGCACCCGTCAATG
CCGGCCACCAATATCAAACAACTGATCGAACTCGCGAAGGACCCGCGCAG
CAAGCTGAATTACGGTTCCGCCGGCAGCGGCACTACCGGGCACCTCGTCG
GCGAGCTGCTGAAAAAGCGCGCCGGCATCCCGCTCACGCACGTTCCGTTC
AAAGGCTCGGGACCGGCATTAACCGCGCTGTTGTCCAACGATGTGGGCAT
CATGCTGTCAGGCCCGCCGGCCGTGCTCGCGCTGTCCCAGGCGGGACGCC
TGCGCGTGCTTGCGACTTCCGGCGTCACGCGCACGCCGGTCATGCCGGAC
GTTCCCACGTTCATCGAGTCCGGCCTGCACATCGAAATCACATCATGGTA
TTGCATGGTCGTGCCGGCGGGCACGCCGCCAGCCATCGTCAAACAGCTTC
ATGCCGCGCTGGTAGACAGCCTCAAAAGCCCGGAAGTGGCGGAGACCCTG
CTCAAGATGGGCGCCCCTCCCGAATGGTCGAGCCCCGCAGAACTGACCGT
ATTCCTGCGCGCGGAAATCAAAAAGTTCGCGGAAGTCATCGAGATCGCGG
GCGCGAAAATCGATTGA
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