mRNA_P-wetherbeei_contig16181.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Match: A0A7V4WLD2_9BACT (NAD(P)-dependent oxidoreductase n=3 Tax=Candidatus Caldatribacterium TaxID=1454725 RepID=A0A7V4WLD2_9BACT) HSP 1 Score: 89.7 bits (221), Expect = 5.350e-18 Identity = 69/199 (34.67%), Postives = 101/199 (50.75%), Query Frame = 1
Query: 1 RFVHVSTRSVFGGRPPTETKIGEDERP-QPAGIYGSSKAAAEHGLLALREQFGIDLAVARITGVFGPWQGPASFIGQAMEAVLASRAHRTE----RGGDDAYELTYVKDTVRGLMSLVDAERLRHPVYHVASGD--RLVRLAEVADAYTSADPTVDVHFGPGANPASQGRTPLDTTRMRTELGFETRWSITDAVADYLR 576
+F++VS+ +V+G T GE P P+ +YG+SKA+AE+ L +GID+ + R FGP P+ +L S E G D TYVKDT G + + E LRH ++++A+ + LA +A Y+ D +V GPG +G T LD T R ELGFE R+ + +AVA+Y R
Sbjct: 115 KFLYVSSGAVYGE---TRDNPGELTHPVNPSDLYGASKASAEYLALQYGHHYGIDVRIVRPYFFFGPGLLPSEMT-PVFRVLLGSLEGLEELVLESGRDQRLGFTYVKDTAWGTVLAYEKEHLRHRIFNIATSEVTSFPDLARLAQKYS--DHPREVILGPGKL-FPRGET-LDITLAREELGFEPRYRMEEAVAEYAR 305
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Match: UPI0019188EA1 (NAD(P)-dependent oxidoreductase n=1 Tax=Ramlibacter sp. AW1 TaxID=2801330 RepID=UPI0019188EA1) HSP 1 Score: 89.4 bits (220), Expect = 7.330e-18 Identity = 64/208 (30.77%), Postives = 95/208 (45.67%), Query Frame = 1
Query: 1 RFVHVSTRSVFGG-----RPPTETKIGEDERPQPAGIYGSSKAAAEHGLLALREQFGIDLAVARITGVFGPWQGPA----SFIGQAMEAVLASRAHRTERGGDDAYELTYVKDTVRGLMSLVDAERLRHPVYHVASGDRLVRLAEVADAYTSADPTVDV-------HFGPGANPASQGRTPLDTTRMRTELGFETRWSITDAVADYLR 576
RFV S+R+ +G PT I ED +P +Y K A+E QFG++ R +FGP + S + + +E L R R RGGD ++ Y D ++ + + R+ Y+++ R L ++ADA P D+ + G G N A LD TR R +LGFE R+S+ AVADY+R
Sbjct: 110 RFVFSSSRAAYGAIEGEHAHPTYRPIAEDHPLRPVHVYDVCKVASESMGRCYASQFGMEFVALRFATIFGPGKTLRHKNFSILSRIIEEPLHGRPVRIPRGGDQRDDMIYADDVAEAIVLALLHPKPRYTEYNISHA-RATTLHDLADAVRRQVPRADIEIAGGLDYIGSGVNYAGI----LDNTRARADLGFEPRFSLDSAVADYIR 312
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Match: A0A2W1A9L7_9CHLR (UDP-glucose 4-epimerase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W1A9L7_9CHLR) HSP 1 Score: 85.1 bits (209), Expect = 2.960e-16 Identity = 63/210 (30.00%), Postives = 101/210 (48.10%), Query Frame = 1
Query: 13 VSTRSVFGGRPPTETKIGEDERP-------QPAG--IYGSSKAAAEHGLLALREQFGIDLAVARITGVFGPWQ-----GPASFI-GQAMEAVLASRAHRTERGGDDAYELTYVKDTVRGLMSLVDAERLRHPVYHVASGDRLVRLAEVADAYTSADPTVDVHFGPGANPAS--QGRTP------LDTTRMRTELGFETRWSITDAVADYL 573
V T S+ P T +G RP P+G +YG++K A+E L +GI R ++GP + G + + + ME L + R ++GGDD+Y++TY +D ++ A+R H V+H+ SG R L E D+ P+ + GPG + QG+ DT+R +TELG+E ++ +AV D+L
Sbjct: 113 VFTSSIAALSPITPEYLGSGARPIAEDFPAYPSGGSVYGATKVASELMGLNYERLYGIKFVALRFATIYGPGKNAPRHGNINVVWNRIMEHALLGKPLRFDKGGDDSYDMTYSRDVAHSVVLGCLAQRPLHSVFHIGSG-RSHTLREFVDSVKEIIPSAPLEVGPGQTEPTGLQGQLAANPGWLFDTSRAKTELGYEAQYLPREAVKDWL 321
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Match: A0A662D8B5_9BACT (NAD(P)-bd_dom domain-containing protein n=2 Tax=Candidatus Aerophobetes bacterium TaxID=2030807 RepID=A0A662D8B5_9BACT) HSP 1 Score: 84.3 bits (207), Expect = 4.750e-16 Identity = 61/196 (31.12%), Postives = 108/196 (55.10%), Query Frame = 1
Query: 1 RFVHVSTRSVFGGRPPTETKIGEDERP-QPAGIYGSSKAAAEHGLLALREQFGIDLAVARITGVFGPWQGPASF--IGQAMEAVLASRAH-RTERGGDDAYELTYVKDTVRGLMSLVDAERLRHPVYHVASGDRL--VRLAEVADAYTSADPTVDVHFGPGANPASQGRTPLDTTRMRTELGFETRWSITDAVADY 570
+ V++S+ +V+G + K E P +P+ +YG+SKA+AE + +GID V R FGP + P+ I + + + ++ E+G D + TYVKDT G + + A+ LR+ +++A+ + V+L E++ ++S+ + V GPG +G T LD + + ELGFE +++I +AVA+Y
Sbjct: 115 KVVYISSGAVYGE---VKDKASEITHPVRPSDLYGASKASAEFIGFQYQNHYGIDFRVVRPYFFFGPGRLPSELPPIFRTLFGCIEGLSNLELEKGADQSLGFTYVKDTAWGTVLVYRAKNLRYKTFNIAAEKAINFVKLVEISRKHSSS--SCKVKIGPGKL-FPRGET-LDISLAKKELGFEPKYTIEEAVAEY 303
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Match: A0A0C4YCU5_9BURK (UDP-glucose 4-epimerase n=1 Tax=Cupriavidus basilensis TaxID=68895 RepID=A0A0C4YCU5_9BURK) HSP 1 Score: 83.6 bits (205), Expect = 1.100e-15 Identity = 66/209 (31.58%), Postives = 92/209 (44.02%), Query Frame = 1
Query: 1 RFVHVSTRSVFGGRPPTETKIGEDER--PQPAGIYGSSKAAAEHGLLALREQFGIDLAVARITGVFGPWQ---GPASFIGQAMEAVLASRAHRTERGGDDAY-------ELTYVKDTVRGLMSLVDAERLRHPVYHVASGDRLVRLAEVADAYTSADPTVDVHFGPGANPAS------QGRTPLDTTRMRTELGFETRWSITDAVADYL 573
R V VS+ SV+G P + E+ P PAG+YG SK AAE L + E G+D+ VAR+ VFGPW+ G + + A+ A GD+ + Y +D L+ L A L H VYH+ G L L + A P + F PA+ R L R+ TEL + +R+ + A DYL
Sbjct: 116 RVVVVSSVSVYGFTAPAASGCYEESASTPAPAGLYGISKLAAEQAALRIGELHGLDVRVARLGPVFGPWERASGAREHLSPHRQVTCAAIA------GDEIVLPRPMTADWLYARDAADALVRLAGAPALAHAVYHIGGGC-LTDLPQWCAALAHHFPGLRWRFSEPGEPATVDYVLPMDRPALSIARLMTELNYVSRFDLKAAANDYL 317
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Match: A0A520H5L3_9BURK (NAD(P)-dependent oxidoreductase n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520H5L3_9BURK) HSP 1 Score: 82.0 bits (201), Expect = 4.200e-15 Identity = 62/202 (30.69%), Postives = 94/202 (46.53%), Query Frame = 1
Query: 1 RFVHVSTRSVFGGRPPTETKIGEDER-PQPAGIYGSSKAAAEHGLLALREQFGIDLAVARITGVFGPWQ---GPASFIGQAMEAVLA-SRAHRTERGGDDAYELTYVKDTVRGLMSLVDAERLRHPVYHVASGDRLVRLAEVADAYTSADPTVDVH-FGPGANPASQ-----GRTPLDTTRMRTELGFETRWSITDAVADYL 573
R + VS+ +V+G PP + E P PA +YG +K AAE L L +D+ +AR+ V+GPW+ G + +A+ A R + + +D L +L+ A RHPVYHV G+ + L + A +A+P D GPG P + R LDT R+R + G+ ++ A AD L
Sbjct: 118 RLLVVSSVAVYGIAPPAGARYDEATSCPAPAALYGITKLAAEQAALRLATLHDMDVRIARLGPVYGPWEHATGVRDALSPHTQALAALRRGEPVVLPRPMRADWIHSRDAAAALAALLRAPAPRHPVYHVG-GELMTDLEQWCAALAAAEPAFDWRRAGPGDTPTVRYGLPVDRAALDTRRLREDTGWRPAHTLATAAADLL 318
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Match: F2LNQ3_BURGS (Putative NAD dependent epimerase/dehydratase n=50 Tax=Burkholderia TaxID=32008 RepID=F2LNQ3_BURGS) HSP 1 Score: 81.6 bits (200), Expect = 5.360e-15 Identity = 66/206 (32.04%), Postives = 97/206 (47.09%), Query Frame = 1
Query: 1 RFVHVSTRSVFGGRPPTETKIGEDER-PQPAGIYGSSKAAAEHGLLALREQFGIDLAVARITGVFGPWQGPASFIGQAMEAVLASR------AHRTERGGDDAYELTYVKDTVRGLMSLVDAERLRHPVYHVASGDR------LVRLAEVADAYT---SADPTVDVHFGPGANPASQGRTPLDTTRMRTELGFETRWSITDAVADY 570
R + + + +VFG +++ EDE P+P +YG +K AAE + R+ G+D+AVAR+ VFGPW+ L +R R RG D + + + + L++A LRH +YHV SG R +L A+T DP V+ G G+ PA+ R PLD TR+R + GF A A Y
Sbjct: 117 RVIVLGSGAVFGAAGIGPSRLREDEIVPRPESLYGITKQAAESAAVRFRQAHGLDVAVARLGVVFGPWEHDTEVRDTLSLPFLLNRMAQAGETARLGRGIPDDW--IHAGEAAEAVTRLLEAASLRHALYHVGSGRRWSLAAWCEQLRRHYPAFTYEIGVDPA-RVNLG-GSAPAA--RAPLDVTRLRDQTGFVAAHDEASACASY 316
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Match: UPI00131AFB2B (NAD(P)-dependent oxidoreductase n=1 Tax=Jiella sp. R10 TaxID=2606717 RepID=UPI00131AFB2B) HSP 1 Score: 81.3 bits (199), Expect = 6.100e-15 Identity = 56/188 (29.79%), Postives = 87/188 (46.28%), Query Frame = 1
Query: 1 RFVHVSTRSVFGGRPPTETKIGEDERPQPAGIYGSSKAAAEHGLLALREQFGIDLAVARITGVFGPWQGPASFIGQAMEAVLASRAHRTERGGDDAYELTYVKDTVRGLMSLVDAERLRHPVYHVASGDRLVRLAEVADAYTSADPTVDVHFGPGANPASQGRTPLDTTRMRTELGFETRWSITDAVA 564
R V S+ ++G R + ED P P G+YG+SK AAE +L +D R+ ++GP + + + + AV RA DA +V+D V GL++ A VY++A+ + + EV DA P + F A+P++ G T R R ELGF S++D +A
Sbjct: 116 RVVVCSSVEIYGTR--RRGILDEDAPPDPPGVYGASKLAAEAAVLGYANGQRLDALAIRLGWIYGPGRRTPTMLDALLRAVEDGRAFEVPAHPADATHYLFVEDAVSGLLAAASAPAPTARVYNIAAPEGQT-MGEVIDAVRRLRPGSRIAFA-AADPSTDGPDGYSTRRARDELGFRAATSLSDGMA 299
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Match: UPI0015E27B9E (NAD(P)-dependent oxidoreductase n=1 Tax=Burkholderia gladioli TaxID=28095 RepID=UPI0015E27B9E) HSP 1 Score: 79.0 bits (193), Expect = 9.650e-15 Identity = 64/197 (32.49%), Postives = 92/197 (46.70%), Query Frame = 1
Query: 28 VFGGRPPTETKIGEDER-PQPAGIYGSSKAAAEHGLLALREQFGIDLAVARITGVFGPWQGPASFIGQAMEAVLASR------AHRTERGGDDAYELTYVKDTVRGLMSLVDAERLRHPVYHVASGDR------LVRLAEVADAYT---SADPTVDVHFGPGANPASQGRTPLDTTRMRTELGFETRWSITDAVADY 570
+FG +++ EDE P+P +YG +K AAE + R+ G+D+AVAR+ VFGPW+ L +R R RG D + + + + L++A LRH +YHV SG R +L A+T DP V+ G G+ PA+ R PLD TR+R + GF A A Y
Sbjct: 1 MFGAAGIGPSRLREDEIVPRPESLYGITKQAAESAAVRFRQSHGLDVAVARLGVVFGPWEHDTGVRDTLSLPFLLNRMAQAGETARLGRGTPDDW--IHAGEAAEAVTRLLEAASLRHALYHVGSGRRWSLAAWCEQLRRHYPAFTYEIGVDPA-RVNLG-GSAPAA--RAPLDVTRLRDQTGFVAAHDEASACASY 191
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Match: A0A7W4NRP8_9PROT (NAD(P)-dependent oxidoreductase n=1 Tax=Gluconacetobacter dulcium TaxID=2729096 RepID=A0A7W4NRP8_9PROT) HSP 1 Score: 80.5 bits (197), Expect = 1.140e-14 Identity = 64/206 (31.07%), Postives = 97/206 (47.09%), Query Frame = 1
Query: 1 RFVHVSTRSVFGGRPPTETKIGEDERPQPAGIYGSSKAAAEHGLLALREQFGIDLAVARITGVFGPWQGPASFIGQAMEAVLASRAHRTER--GGDD-------AYELTYVKDTVRGLMSLVDAERLRHPVYHVASGDRLVRLAEVADAYTSADPTVDV-HFGPGA-----NPASQGRTPLDTTRMRTELGFETRWSITDAVADYL 573
R V S+ +V+G P E I ED P +YG SK AAE L L E + +D+ +ARI V+GPW+ G A+ +L+ A ER G+ A + Y +D RG+ SL A+ L+H +Y++ +G + +AE S + H PG +P Q R PL R+ + + ++ D V +YL
Sbjct: 103 RVVMASSVAVYGHVDPAEGMISEDHPLAPHSLYGISKVAAEKTALRLAEIYQMDVRIARIGPVYGPWEH-----GTAVRPMLSPHAQLLERLLRGEPVILDRRMAGDWLYSRDAGRGIASLALAQVLKHDIYNIGNGS-VSTVAEWGTVMASVLHGAPITHSVPGKAPTILSPLRQDRAPLSIDRLLQDTDYVPCFTGADTVVNYL 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16181.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16181.1.1 >prot_P-wetherbeei_contig16181.1.1 ID=prot_P-wetherbeei_contig16181.1.1|Name=mRNA_P-wetherbeei_contig16181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp RFVHVSTRSVFGGRPPTETKIGEDERPQPAGIYGSSKAAAEHGLLALREQback to top mRNA from alignment at P-wetherbeei_contig16181:25..600+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16181.1.1 ID=mRNA_P-wetherbeei_contig16181.1.1|Name=mRNA_P-wetherbeei_contig16181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig16181:25..600+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16181:25..600+ >mRNA_P-wetherbeei_contig16181.1.1 ID=mRNA_P-wetherbeei_contig16181.1.1|Name=mRNA_P-wetherbeei_contig16181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig16181:25..600+ (Phaeothamnion wetherbeei SAG_119_79)back to top |