mRNA_P-wetherbeei_contig16176.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16176.1.1
Unique NamemRNA_P-wetherbeei_contig16176.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Match: A0A835ZB12_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB12_9STRA)

HSP 1 Score: 439 bits (1130), Expect = 2.270e-149
Identity = 213/262 (81.30%), Postives = 240/262 (91.60%), Query Frame = 1 
Query:    1 RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQFPEEAGGGRRRKSYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLERGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTQNRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVIQKVEYVEDRDKV 786
            +YDDIPVETSGENVPEPI++FPPDVLG +LMR TELC Y KPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFP LISLLR G P++P++ GG R+R +YP  LVLAPTREL SQIYDEARRFCYCTG+APVVIYGGA+ R+QLRDL+RGCDLL+ATPGRLVD IERGK+SL CI+FLVLDEADRMLDMGFEPQIRRIV+QEDM+ +RQTFMFSATFPR IQ+LA+DFM+DY+FLAVGRVGSASKDVIQ +EY E+  K+
Sbjct:  113 KYDDIPVETSGENVPEPIETFPPDVLGPELMRCTELCGYTKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPTLISLLRTGGPEYPDD-GGRRQRTTYPVALVLAPTRELASQIYDEARRFCYCTGVAPVVIYGGAEARSQLRDLDRGCDLLVATPGRLVDFIERGKVSLQCIKFLVLDEADRMLDMGFEPQIRRIVQQEDMSLDRQTFMFSATFPREIQRLASDFMKDYIFLAVGRVGSASKDVIQTIEYCENDQKL 373
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BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Match: A0A7S2V445_9STRA (RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V445_9STRA)

HSP 1 Score: 425 bits (1092), Expect = 8.460e-146
Identity = 204/262 (77.86%), Postives = 235/262 (89.69%), Query Frame = 1 
Query:    1 RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQFPEEAGGGRRRKSYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLERGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTQNRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVIQKVEYVEDRDKV 786
            +Y DIPVE SG+N P+P+  F P+++GEQLMRNT LCNY KPTPVQ+YSIPIG  GRDLMACAQTGSGKTAGFLFPVL S++  GAP  P++  GG RRK++P  LVLAPTREL SQI++EARRFCYCTG+APVV+YGGAD+R QLRDLERGCDLL+ATPGRLVDL+ERG++SL  IRFLVLDEADRMLDMGFEPQIRRIVEQEDMT+ RQTFMFSATFPR IQ+LAADFM+DY+FL VGRVGSASKDV+QKVEYV++RDK+
Sbjct:   48 KYFDIPVEVSGDNAPDPVSEFTPELVGEQLMRNTVLCNYNKPTPVQRYSIPIGAQGRDLMACAQTGSGKTAGFLFPVLTSMITNGAP--PQQGQGGYRRKTFPVALVLAPTRELASQIFNEARRFCYCTGVAPVVVYGGADVRVQLRDLERGCDLLVATPGRLVDLMERGRVSLLNIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTRERQTFMFSATFPREIQRLAADFMKDYIFLTVGRVGSASKDVLQKVEYVDERDKL 307
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BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Match: D8LH21_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH21_ECTSI)

HSP 1 Score: 429 bits (1103), Expect = 3.050e-144
Identity = 217/263 (82.51%), Postives = 231/263 (87.83%), Query Frame = 1 
Query:    1 RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQFPEEAGGGRRRKSYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLERGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTQ--NRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVIQKVEYVEDRDK 783
            RYDDIPVETSGENVPEPIDSF  D+LGE LMR T LC Y KPTPVQKYSIPIGIS RDLMACAQTGSGKTAGFLFP LISLLR G PQ+P +     RRKSYP  LVLAPTREL SQIYDEARRFCY TGIAPVVIYGGAD+R+Q R+LERGCDLL+ATPGRLVDL+ERG+ISLACI+FLVLDEADRMLDMGFEPQIRRIVE+EDMT+   RQTFMFSATFPR IQQLAADFM DY+FLAVGRVGSASKDV Q VEYV+   K
Sbjct:  191 RYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDG----RRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLACIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQK 449
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BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Match: A0A6H5JCH1_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH1_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 2.160e-143
Identity = 217/263 (82.51%), Postives = 231/263 (87.83%), Query Frame = 1 
Query:    1 RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQFPEEAGGGRRRKSYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLERGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTQ--NRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVIQKVEYVEDRDK 783
            RYDDIPVETSGENVPEPIDSF  D+LGE LMR T LC Y KPTPVQKYSIPIGIS RDLMACAQTGSGKTAGFLFP LISLLR G PQ+P +     RRKSYP  LVLAPTREL SQIYDEARRFCY TGIAPVVIYGGAD+R+Q R+LERGCDLL+ATPGRLVDL+ERG+ISLACI+FLVLDEADRMLDMGFEPQIRRIVE+EDMT+   RQTFMFSATFPR IQQLAADFM DY+FLAVGRVGSASKDV Q VEYV+   K
Sbjct:  274 RYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDG----RRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLACIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQK 532
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BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Match: A0A836CEH0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEH0_9STRA)

HSP 1 Score: 432 bits (1110), Expect = 6.980e-143
Identity = 218/291 (74.91%), Postives = 240/291 (82.47%), Query Frame = 1 
Query:    1 RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQ-----------------------------FPEEAGGGRRRKSYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLERGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTQNRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVIQKVEYVEDRDKV 786
            +YDDIPVETSGENVPEPI++FPP++LG +LMR+TELC YLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFP LISLLR G PQ                             +PE+ GG R+R  YP  LVLAPTREL SQIYDEARRFCYCTG+APVVIYGGA+ RTQLRDL+RGCDLL+ATPGRLVD IERGK+SL CIRFLVLDEADRMLDMGFEPQIRRIVEQEDM + RQTFMFSATFPR IQ+LA+DFM+DY+FLAVGRVGSASKDVIQ VEY E+  K+
Sbjct:   68 KYDDIPVETSGENVPEPIETFPPEILGPELMRSTELCGYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPTLISLLRTGGPQKQKCLNVPIRSQRSFNNQLPLIAAASAAQYPED-GGRRQRSVYPVALVLAPTRELASQIYDEARRFCYCTGVAPVVIYGGAEARTQLRDLDRGCDLLVATPGRLVDFIERGKVSLQCIRFLVLDEADRMLDMGFEPQIRRIVEQEDMARTRQTFMFSATFPREIQRLASDFMKDYIFLAVGRVGSASKDVIQTVEYCENDQKM 357
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BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Match: A0A7S3XUS5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUS5_HETAK)

HSP 1 Score: 411 bits (1056), Expect = 3.750e-140
Identity = 203/262 (77.48%), Postives = 230/262 (87.79%), Query Frame = 1 
Query:    1 RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQFPEEAGGGRRRKSYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLERGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTQNRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVIQKVEYVEDRDKV 786
            +YDDIPVE SGENVP  I++F  +V+GE+LM NT LC Y KPTPVQ+YSIPIG   RDLMACAQTGSGKTAGFLFPVLIS+L +G P  PEE  GG  R+++P  LVLAPTREL SQIYDEA+RFCY TGIAPVVIYGGAD+R QLR+LERGCDLL+ATPGRLVDLIERG++SLAC+ FL+LDEADRMLDMGFEPQIRRIVEQEDM + RQTFMFSATFPR IQ+LAADFMR+YVFL VGRVGSASKDV Q+VEYVE+ +K+
Sbjct:   54 KYDDIPVEVSGENVPPHIETFSVEVIGERLMANTVLCQYNKPTPVQRYSIPIGKESRDLMACAQTGSGKTAGFLFPVLISMLTKGPPAPPEE--GGYARRTHPNALVLAPTRELASQIYDEAKRFCYATGIAPVVIYGGADVRNQLRELERGCDLLVATPGRLVDLIERGRVSLACVNFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLAADFMRNYVFLTVGRVGSASKDVTQRVEYVEEHEKL 313
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BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Match: A0A662XJH5_9STRA (RNA helicase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJH5_9STRA)

HSP 1 Score: 402 bits (1034), Expect = 2.730e-139
Identity = 194/261 (74.33%), Postives = 225/261 (86.21%), Query Frame = 1 
Query:    1 RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQFPEEAGGGRRRKSYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLERGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTQNRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVIQKVEYVEDRDK 783
            +YDDIPVETSGENVP+P+  F  + LG +++RN ELC Y KPTPVQKYSIPIG+ GRD+MACAQTGSGKT GFLFP L ++LR G    P + G GR RK +P  L+LAPTREL SQIYDEA++FCYCTGIAPVVIYGGA++  QLR+LERGCD+L+ATPGRLVDL+ERG+ISL+CIRFL+LDEADRMLDMGFEPQIRRIVEQEDM + RQTFMFSATFPR IQ+LA+DF+RDY+FL VGRVGSASKDV Q VEY+E  DK
Sbjct:   27 KYDDIPVETSGENVPDPVLEFSAEELGPEVIRNLELCKYSKPTPVQKYSIPIGLQGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTP-PPDVGHGRSRKIFPAALILAPTRELASQIYDEAKKFCYCTGIAPVVIYGGAEVGHQLRELERGCDMLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDK 286
[Close]
BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Match: W7TYZ7_9STRA (RNA helicase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYZ7_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 7.120e-137
Identity = 200/262 (76.34%), Postives = 227/262 (86.64%), Query Frame = 1 
Query:    1 RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQFPEEAGGGRRRKSYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLERGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTQNRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVIQKVEYVEDRDKV 786
            +YDDIPVETSGE  PEPI SF  D++G QLM N  LCNY KPTPVQKYS+PIG++ RDLMACAQTGSGKTAGFLFP ++S+LR+GAP+ P   G    RK YP  LVLAPTREL SQI+DEA++FCYCTG+ PVVIYGGA++R QLR+LERGCDLL+ATPGRLVDLIER +ISL  IRFL+LDEADRMLDMGFEPQIRRIVEQE M  +RQTFMFSATFPR IQ+LAADFM+DY+FLAVGRVGSASKDVIQK+EYVE  DK+
Sbjct:  191 KYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPE-PPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKI 451
[Close]
BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Match: A0A5D6XZC5_9STRA (RNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZC5_9STRA)

HSP 1 Score: 404 bits (1037), Expect = 2.740e-136
Identity = 196/261 (75.10%), Postives = 226/261 (86.59%), Query Frame = 1 
Query:    1 RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQFPEEAGGGRRRKSYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLERGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTQNRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVIQKVEYVEDRDK 783
            +YDDIPVETSGENVP+P+  F    LG +++RN  LC Y KPTPVQKYSIPIG++GRD+MACAQTGSGKT GFLFP L ++LR GA Q PE +G GR R+ YP+ LVLAPTREL SQIYDEA++FCYCTGIAPVV+YGGA++  QLR+LERGCDLL+ATPGRLVDL+ERG+ISLA IRFL+LDEADRMLDMGFEPQIRRIVEQEDM + RQTFMFSATFPR IQ+LA+DF+ DY+FL VGRVGSASKDV Q VEY+E  DK
Sbjct:   49 KYDDIPVETSGENVPDPVFEFSEAELGPEVVRNLNLCKYAKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGAKQTPE-SGSGRSRRIYPSALVLAPTRELASQIYDEAKKFCYCTGIAPVVVYGGAEVGNQLRNLERGCDLLVATPGRLVDLMERGRISLAAIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLEDYIFLTVGRVGSASKDVKQTVEYIEQYDK 308
[Close]
BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Match: H3G780_PHYRM (RNA helicase n=3 Tax=Phytophthora TaxID=4783 RepID=H3G780_PHYRM)

HSP 1 Score: 400 bits (1028), Expect = 3.920e-136
Identity = 192/261 (73.56%), Postives = 226/261 (86.59%), Query Frame = 1 
Query:    1 RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQFPEEAGGGRRRKSYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLERGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTQNRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVIQKVEYVEDRDK 783
            +YDDIPVETSGENVP+P+  F  + LG +++RN ELC Y KPTPVQKYSIPIG++GRD+MACAQTGSGKT GFLFP L ++LR G    P + G GR RK +P  L+L+PTREL SQI++EA++FCYCTGIAPVVIYGGA++  QLR+LERGCDLL+ATPGRLVDL+ERG+ISL+CIRFL+LDEADRMLDMGFEPQIRRIVEQEDM + RQTFMFSATFPR IQ+LA+DF+RDY+FL VGRVGSASKDV Q VEY+E  DK
Sbjct:   21 KYDDIPVETSGENVPDPVSEFAAEELGPEVIRNLELCKYDKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTP-PPDVGHGRSRKIFPAALILSPTRELASQIHEEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDK 280
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16176.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZB12_9STRA2.270e-14981.30RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2V445_9STRA8.460e-14677.86RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonic... [more]
D8LH21_ECTSI3.050e-14482.51RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JCH1_9PHAE2.160e-14382.51RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A836CEH0_9STRA6.980e-14374.91P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3XUS5_HETAK3.750e-14077.48Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A662XJH5_9STRA2.730e-13974.33RNA helicase (Fragment) n=1 Tax=Nothophytophthora ... [more]
W7TYZ7_9STRA7.120e-13776.34RNA helicase n=4 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A5D6XZC5_9STRA2.740e-13675.10RNA helicase n=1 Tax=Pythium brassicum TaxID=14850... [more]
H3G780_PHYRM3.920e-13673.56RNA helicase n=3 Tax=Phytophthora TaxID=4783 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16176contigP-wetherbeei_contig16176:35..1075 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LH21
Preferred nameDDX3X
PFAMsDEAD,Helicase_C
Model size786
Max annot lvl2759|Eukaryota
KEGG koko:K10268,ko:K11594,ko:K17642
KEGG Pathwayko04622,ko05161,ko05203,map04622,map05161,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000278,GO:0000280,GO:0000375,GO:0000377,GO:0000390,GO:0000398,GO:0000819,GO:0001558,GO:0001775,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0002164,GO:0002165,GO:0002168,GO:0002181,GO:0002183,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003729,GO:0003743,GO:0003824,GO:0003924,GO:0004003,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005777,GO:0005829,GO:0005886,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006996,GO:0007049,GO:0007059,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007346,GO:0007431,GO:0007435,GO:0007552,GO:0008026,GO:0008047,GO:0008094,GO:0008104,GO:0008134,GO:0008135,GO:0008143,GO:0008150,GO:0008152,GO:0008186,GO:0008190,GO:0008219,GO:0008380,GO:0008625,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009886,GO:0009887,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010466,GO:0010467,GO:0010468,GO:0010494,GO:0010501,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010623,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010950,GO:0010951,GO:0010952,GO:0012501,GO:0012502,GO:0012505,GO:0014070,GO:0016020,GO:0016043,GO:0016055,GO:0016070,GO:0016071,GO:0016192,GO:0016246,GO:0016441,GO:0016442,GO:0016458,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017148,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019827,GO:0019867,GO:0019887,GO:0019953,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0022612,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030177,GO:0030234,GO:0030295,GO:0030307,GO:0030308,GO:0030718,GO:0031047,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031332,GO:0031333,GO:0031369,GO:0031399,GO:0031401,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031983,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032392,GO:0032479,GO:0032481,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032642,GO:0032648,GO:0032722,GO:0032728,GO:0032940,GO:0032984,GO:0032988,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0033592,GO:0033674,GO:0033993,GO:0034063,GO:0034248,GO:0034249,GO:0034250,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034774,GO:0035070,GO:0035071,GO:0035072,GO:0035075,GO:0035078,GO:0035081,GO:0035194,GO:0035272,GO:0035556,GO:0035613,GO:0035770,GO:0036098,GO:0036230,GO:0036314,GO:0036464,GO:0036477,GO:0040008,GO:0040029,GO:0042119,GO:0042221,GO:0042254,GO:0042255,GO:0042256,GO:0042325,GO:0042327,GO:0042579,GO:0042623,GO:0042981,GO:0043021,GO:0043024,GO:0043025,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043086,GO:0043154,GO:0043170,GO:0043186,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043273,GO:0043280,GO:0043281,GO:0043299,GO:0043312,GO:0043539,GO:0043549,GO:0043603,GO:0043604,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045069,GO:0045070,GO:0045087,GO:0045321,GO:0045495,GO:0045727,GO:0045787,GO:0045859,GO:0045860,GO:0045861,GO:0045862,GO:0045893,GO:0045926,GO:0045927,GO:0045931,GO:0045935,GO:0045937,GO:0045944,GO:0045948,GO:0046483,GO:0046677,GO:0046685,GO:0046903,GO:0048027,GO:0048102,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048707,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050792,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051276,GO:0051336,GO:0051338,GO:0051345,GO:0051346,GO:0051347,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0052547,GO:0052548,GO:0060033,GO:0060205,GO:0060255,GO:0060293,GO:0060548,GO:0060828,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070035,GO:0070717,GO:0070727,GO:0070887,GO:0070925,GO:0071103,GO:0071214,GO:0071236,GO:0071243,GO:0071310,GO:0071396,GO:0071470,GO:0071649,GO:0071651,GO:0071704,GO:0071826,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0090068,GO:0090263,GO:0090304,GO:0097159,GO:0097190,GO:0097191,GO:0097193,GO:0097305,GO:0097306,GO:0097307,GO:0097308,GO:0097458,GO:0097617,GO:0097708,GO:0098588,GO:0098727,GO:0098772,GO:0098805,GO:0098813,GO:0099503,GO:0101002,GO:0104004,GO:0140014,GO:0140097,GO:0140098,GO:0198738,GO:1900087,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901654,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902532,GO:1902680,GO:1902806,GO:1902808,GO:1903047,GO:1903506,GO:1903508,GO:1903608,GO:1903900,GO:1903902,GO:1904813,GO:1905114,GO:1990904,GO:2000045,GO:2000112,GO:2000113,GO:2000116,GO:2000117,GO:2001056,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Exons2
Evalue5e-145
EggNOG OGsCOG0513@1|root,KOG0335@2759|Eukaryota
EC3.6.4.13
Descriptionhelicase activity
Cds size786
COG categoryJKL
BRITEko00000,ko00001,ko01000,ko03019,ko03036,ko03041,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186079.308472-CDS-P-wetherbeei_contig16176:34..2081683186079.308472-CDS-P-wetherbeei_contig16176:34..208Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16176 35..208 -
1683186079.32215-CDS-P-wetherbeei_contig16176:463..10751683186079.32215-CDS-P-wetherbeei_contig16176:463..1075Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16176 464..1075 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16176.1.1prot_P-wetherbeei_contig16176.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16176 35..1075 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16176.1.1

>prot_P-wetherbeei_contig16176.1.1 ID=prot_P-wetherbeei_contig16176.1.1|Name=mRNA_P-wetherbeei_contig16176.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp
RYDDIPVETSGENVPEPIDSFPPDVLGEQLMRNTELCNYLKPTPVQKYSI
PIGISGRDLMACAQTGSGKTAGFLFPVLISLLREGAPQFPEEAGGGRRRK
SYPTGLVLAPTRELTSQIYDEARRFCYCTGIAPVVIYGGADIRTQLRDLE
RGCDLLMATPGRLVDLIERGKISLACIRFLVLDEADRMLDMGFEPQIRRI
VEQEDMTQNRQTFMFSATFPRVIQQLAADFMRDYVFLAVGRVGSASKDVI
QKVEYVEDRDKV
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mRNA from alignment at P-wetherbeei_contig16176:35..1075-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16176.1.1 ID=mRNA_P-wetherbeei_contig16176.1.1|Name=mRNA_P-wetherbeei_contig16176.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1041bp|location=Sequence derived from alignment at P-wetherbeei_contig16176:35..1075- (Phaeothamnion wetherbeei SAG_119_79)
AGGTACGACGACATCCCGGTGGAGACCAGCGGCGAGAACGTGCCGGAACC
GATCGACTCGTTCCCACCGGACGTGCTGGGGGAGCAGCTGATGCGCAACA
CAGAGTTGTGCAACTACCTCAAGCCGACGCCCGTCCAGAAGTACTCCATA
CCCATCGGCATCAGCGGCCGCGACCTCATGGCCTGCGCGCAGACGGGCTC
GGGCAAGACGGCCGGCTTCCTCTTCCCCGTGCTCATCTCCCTGCTTCGTG
AGGGTGCGCCGCAGTTCCCCGAGGAGGCCGGCGGCGGCCGGCGGCGCAAA
TCCTACCCAACAGGCCTGGTGCTGGCGCCGACGCGCGAGCTGACCAGCCA
GATCTACGACGAGGCGCGGCGCTTCTGCTACTGCACGGGCATCGCTCCCG
TGGTCATCTACGGCGGCGCCGACATCCGGACGCAGCTGCGCGACCTGGAG
CGGGGTTGCGACCTGCTCATGGCAACGCCCGGCCGCCTGGTTGATCTGAT
CGAACGTGGCAAGATTTCGCTGGCGTGCATCCGCTTCCTCGTGCTGGACG
AGGCGGACCGCATGCTCGACATGGGCTTCGAGCCCCAGATCCGCCGCATC
GTCGAACAGGAGGTACAGTTTCTCGGCTCGGTTCCGTTAATTTTTCTGTT
TTGTTTTGTGGCTTTGTTTGGGGCGGTTTCCTGGGGCAGTTTCGTGGTTC
GAGGGTCCAGTCTTGGCATTGGTGTTTCGTTACATTCGTTCCGTCTATCT
TTAAGCTCTAGGCTGGCTGGCTTCTGCAATGTTTCCCTCTCCCCTCTTCC
ACCTTTACGCGCTTTCTGCTTGCCGCTGGTTGCTTTCTGCCGCCCGCTGC
TGGCACAACTCCTGCAGGACATGACGCAGAACCGGCAGACGTTCATGTTC
AGCGCGACGTTCCCGCGGGTGATCCAGCAGCTGGCGGCTGACTTCATGCG
CGACTACGTCTTCCTCGCCGTCGGCCGCGTCGGGTCCGCTTCGAAGGACG
TCATCCAGAAGGTCGAGTACGTCGAGGACCGCGACAAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16176:35..1075-

>mRNA_P-wetherbeei_contig16176.1.1 ID=mRNA_P-wetherbeei_contig16176.1.1|Name=mRNA_P-wetherbeei_contig16176.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig16176:35..1075- (Phaeothamnion wetherbeei SAG_119_79)
AGGTACGACGACATCCCGGTGGAGACCAGCGGCGAGAACGTGCCGGAACC
GATCGACTCGTTCCCACCGGACGTGCTGGGGGAGCAGCTGATGCGCAACA
CAGAGTTGTGCAACTACCTCAAGCCGACGCCCGTCCAGAAGTACTCCATA
CCCATCGGCATCAGCGGCCGCGACCTCATGGCCTGCGCGCAGACGGGCTC
GGGCAAGACGGCCGGCTTCCTCTTCCCCGTGCTCATCTCCCTGCTTCGTG
AGGGTGCGCCGCAGTTCCCCGAGGAGGCCGGCGGCGGCCGGCGGCGCAAA
TCCTACCCAACAGGCCTGGTGCTGGCGCCGACGCGCGAGCTGACCAGCCA
GATCTACGACGAGGCGCGGCGCTTCTGCTACTGCACGGGCATCGCTCCCG
TGGTCATCTACGGCGGCGCCGACATCCGGACGCAGCTGCGCGACCTGGAG
CGGGGTTGCGACCTGCTCATGGCAACGCCCGGCCGCCTGGTTGATCTGAT
CGAACGTGGCAAGATTTCGCTGGCGTGCATCCGCTTCCTCGTGCTGGACG
AGGCGGACCGCATGCTCGACATGGGCTTCGAGCCCCAGATCCGCCGCATC
GTCGAACAGGAGGACATGACGCAGAACCGGCAGACGTTCATGTTCAGCGC
GACGTTCCCGCGGGTGATCCAGCAGCTGGCGGCTGACTTCATGCGCGACT
ACGTCTTCCTCGCCGTCGGCCGCGTCGGGTCCGCTTCGAAGGACGTCATC
CAGAAGGTCGAGTACGTCGAGGACCGCGACAAGGTG
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