mRNA_P-wetherbeei_contig16165.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Match: A0A1F4DGN7_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DGN7_9PROT) HSP 1 Score: 330 bits (846), Expect = 1.210e-108 Identity = 154/187 (82.35%), Postives = 168/187 (89.84%), Query Frame = 1
Query: 61 AAETPVSGGLLKFAVGAEPPNYDCHAQSSFAFIHPVRPHYSTLLKFDTAQYPKIIGDVAESWAVAKDGLTYTFKLKKGVKFHDGSILSSEDIKATYDRIRKPPKGVLSLREEGYADITTIETPDPLTVVFKLKKPNASMLSNFASPWDCIYSAAKLKIDPNWPARNIMGTGPFTFVEHVAGSHWSGR 621
AAETP SGG+L+FAV AEPPNYDCHA SSFAFIHPVRPHYSTLLKFDTA+YP + GD+AESW VAKDGL YTFKL+KGVKFHDGS SSEDI+ATYDR+R PP GV SLR+ YADI IETPDPLTVVFKLKKPNASML+NFASPWDC+YSAAKLK DP +P RNIMGTGPF+FVEHVAGSHW+GR
Sbjct: 20 AAETPKSGGVLRFAVSAEPPNYDCHANSSFAFIHPVRPHYSTLLKFDTAKYPAVKGDLAESWTVAKDGLAYTFKLRKGVKFHDGSTFSSEDIRATYDRLRNPPPGVRSLRQGTYADIAAIETPDPLTVVFKLKKPNASMLANFASPWDCVYSAAKLKQDPKFPERNIMGTGPFSFVEHVAGSHWTGR 206
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Match: A0A7C2UT07_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UT07_9PROT) HSP 1 Score: 325 bits (833), Expect = 1.100e-106 Identity = 149/188 (79.26%), Postives = 171/188 (90.96%), Query Frame = 1
Query: 58 AAAETPVSGGLLKFAVGAEPPNYDCHAQSSFAFIHPVRPHYSTLLKFDTAQYPKIIGDVAESWAVAKDGLTYTFKLKKGVKFHDGSILSSEDIKATYDRIRKPPKGVLSLREEGYADITTIETPDPLTVVFKLKKPNASMLSNFASPWDCIYSAAKLKIDPNWPARNIMGTGPFTFVEHVAGSHWSGR 621
AAAETP GG+LKFAV AEPPNYDCHAQ+SFAFIHPVRPHYSTLL+FDTA+YP I GD+AESW V+KDGL+YTFKL+KGVKFHDGS L+SED+KATY+R+R PP+GV S+R+ YADI +IETPDPLTVVF+LKKPNASML+NFASPWDC+YSAAKLK DP +P RNI+GTGPFTF HVAGSHW+GR
Sbjct: 19 AAAETPKPGGVLKFAVSAEPPNYDCHAQTSFAFIHPVRPHYSTLLEFDTAKYPAIRGDLAESWTVSKDGLSYTFKLRKGVKFHDGSTLTSEDVKATYERLRNPPQGVRSVRQASYADIASIETPDPLTVVFRLKKPNASMLANFASPWDCVYSAAKLKQDPRFPERNILGTGPFTFAGHVAGSHWTGR 206
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Match: A0A1F4D8L9_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4D8L9_9PROT) HSP 1 Score: 319 bits (818), Expect = 2.010e-104 Identity = 156/207 (75.36%), Postives = 174/207 (84.06%), Query Frame = 1
Query: 1 MKTIRLLMGCVAVLFALTCAAAETPVSGGLLKFAVGAEPPNYDCHAQSSFAFIHPVRPHYSTLLKFDTAQYPKIIGDVAESWAVAKDGLTYTFKLKKGVKFHDGSILSSEDIKATYDRIRKPPKGVLSLREEGYADITTIETPDPLTVVFKLKKPNASMLSNFASPWDCIYSAAKLKIDPNWPARNIMGTGPFTFVEHVAGSHWSGR 621
MK LL+ VA L AAE P +GG+L+FAV AEPPNYDCHA +SFAFIHPVRPHYSTLLKFDTA+YP I GD+AESW V+KDGLTYTF L+K VKFHDGS LSSEDIKATY+R+R PP GV S+R+ YADI +IETPDPLTVVFKLKK NASMLSNFASPWDC+YSAAKLK DP +P RNI+GTGPFTFVEHVAGSHW+ R
Sbjct: 1 MKLSALLLS-VAALATAGAIAAEAPKTGGVLRFAVSAEPPNYDCHANTSFAFIHPVRPHYSTLLKFDTAKYPAIKGDLAESWTVSKDGLTYTFGLRKDVKFHDGSALSSEDIKATYERLRDPPPGVRSVRQASYADIASIETPDPLTVVFKLKKTNASMLSNFASPWDCVYSAAKLKQDPRFPERNILGTGPFTFVEHVAGSHWTAR 206
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Match: A0A7C3NYJ0_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NYJ0_9PROT) HSP 1 Score: 312 bits (800), Expect = 1.040e-101 Identity = 150/206 (72.82%), Postives = 172/206 (83.50%), Query Frame = 1
Query: 4 KTIRLLMGCVAVLFALTCAAAETPVSGGLLKFAVGAEPPNYDCHAQSSFAFIHPVRPHYSTLLKFDTAQYPKIIGDVAESWAVAKDGLTYTFKLKKGVKFHDGSILSSEDIKATYDRIRKPPKGVLSLREEGYADITTIETPDPLTVVFKLKKPNASMLSNFASPWDCIYSAAKLKIDPNWPARNIMGTGPFTFVEHVAGSHWSGR 621
+ + +L+G A+ A AAETP SGG+LKFAV AEPPNYDCHAQ+SFAFIHPVRPHY+TLLKFD +YP I GD+AESW V+KDGL YTFKL+KGVKFHDGS LSSED+KATY+R+R P G S+R+ YADI +IETPD LTVVFKLKK NASMLSNFASPWDC+YSAAKLK DP +P RNI+GTGPFTF HVAGSHW+GR
Sbjct: 3 RQVAVLVGAAAL--AAAAMAAETPRSGGVLKFAVSAEPPNYDCHAQTSFAFIHPVRPHYNTLLKFDAPKYPAIKGDLAESWNVSKDGLAYTFKLRKGVKFHDGSTLSSEDVKATYERLRNPTGGARSVRQASYADIASIETPDALTVVFKLKKRNASMLSNFASPWDCVYSAAKLKQDPRFPERNILGTGPFTFAGHVAGSHWTGR 206
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Match: F8BWY7_AFIC5 (ABC transporter substrate-binding protein n=2 Tax=Afipia carboxidovorans TaxID=40137 RepID=F8BWY7_AFIC5) HSP 1 Score: 296 bits (759), Expect = 1.620e-95 Identity = 135/186 (72.58%), Postives = 156/186 (83.87%), Query Frame = 1
Query: 64 AETPVSGGLLKFAVGAEPPNYDCHAQSSFAFIHPVRPHYSTLLKFDTAQYPKIIGDVAESWAVAKDGLTYTFKLKKGVKFHDGSILSSEDIKATYDRIRKPPKGVLSLREEGYADITTIETPDPLTVVFKLKKPNASMLSNFASPWDCIYSAAKLKIDPNWPARNIMGTGPFTFVEHVAGSHWSGR 621
A+TP GG+LKFAVGAEPPNYDCH +SFAFIHPVRPHY+TLLKFD YPK+ GD+A SW VA DGLTYTFKLK +KFHDGS L+S D+KA+YDRI PP+GV+S+R+ Y DIT+IETPD TVVFKLK PNASM++NFASPWDCIYSAAKLK DP +P ++I+GTGPF FVEH AGSHW G
Sbjct: 24 AQTPKKGGVLKFAVGAEPPNYDCHGATSFAFIHPVRPHYNTLLKFDEPNYPKVKGDLAASWTVAPDGLTYTFKLKPNIKFHDGSTLTSADVKASYDRIAHPPQGVVSIRQAAYEDITSIETPDANTVVFKLKAPNASMITNFASPWDCIYSAAKLKEDPKFPEKHILGTGPFKFVEHAAGSHWVGE 209
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Match: A0A1F4EXL3_9PROT (ABC transporter substrate-binding protein n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4EXL3_9PROT) HSP 1 Score: 295 bits (756), Expect = 4.330e-95 Identity = 146/209 (69.86%), Postives = 165/209 (78.95%), Query Frame = 1
Query: 1 MKTIRLLMGCVAVLFALTC--AAAETPVSGGLLKFAVGAEPPNYDCHAQSSFAFIHPVRPHYSTLLKFDTAQYPKIIGDVAESWAVAKDGLTYTFKLKKGVKFHDGSILSSEDIKATYDRIRKPPKGVLSLREEGYADITTIETPDPLTVVFKLKKPNASMLSNFASPWDCIYSAAKLKIDPNWPARNIMGTGPFTFVEHVAGSHWSGR 621
MKT LL A FAL A A+TP GG LKFAV AEPPNYDCHA +SFAF+HPVRPHY+TLLKFD YPKI+GD+A SW+V+ DGL+YTFKL GVKFHDGS SS D+KATYDRIR P G S+R+ YADI +IETPD LTVV KLKK NASML+NFASPWDC+YSAAKLK DP +P RNI+GTGPFTFV+H AGSHW G+
Sbjct: 1 MKTTYLLA---AAAFALAAFPALAQTPRRGGDLKFAVSAEPPNYDCHANTSFAFVHPVRPHYNTLLKFDAPNYPKIVGDLAASWSVSSDGLSYTFKLHDGVKFHDGSSFSSADVKATYDRIRDPQGGARSVRKAAYADIASIETPDRLTVVVKLKKANASMLANFASPWDCVYSAAKLKEDPKFPERNILGTGPFTFVQHAAGSHWIGK 206
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Match: A0A7X7CQH1_9BURK (ABC transporter substrate-binding protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A7X7CQH1_9BURK) HSP 1 Score: 293 bits (750), Expect = 3.450e-94 Identity = 136/190 (71.58%), Postives = 158/190 (83.16%), Query Frame = 1
Query: 52 TCAAAETPVSGGLLKFAVGAEPPNYDCHAQSSFAFIHPVRPHYSTLLKFDTAQYPKIIGDVAESWAVAKDGLTYTFKLKKGVKFHDGSILSSEDIKATYDRIRKPPKGVLSLREEGYADITTIETPDPLTVVFKLKKPNASMLSNFASPWDCIYSAAKLKIDPNWPARNIMGTGPFTFVEHVAGSHWSGR 621
T A ++TP GG L FAV AEPPN+DCHAQ+SFAFIHPVRPHYSTLLKFD A YPK++GD+AESW V+ DGLT+TFKL++ VKFHDGS SS DIKATY+R+R PP GV S+R E Y DI +IETPD TVVFKL KPNASML+NFASPWDC+YSAAKLK +P +P NI+GTGPF FVE+ AGSHW G+
Sbjct: 17 TPALSQTPKRGGTLAFAVSAEPPNFDCHAQTSFAFIHPVRPHYSTLLKFDGANYPKVVGDLAESWEVSPDGLTFTFKLRQNVKFHDGSAFSSADIKATYERLRNPPDGVRSIRVESYKDIQSIETPDAHTVVFKLDKPNASMLANFASPWDCVYSAAKLKENPKFPEHNILGTGPFVFVENQAGSHWVGK 206
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Match: A0A833GFD3_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GFD3_9HYPH) HSP 1 Score: 293 bits (749), Expect = 5.160e-94 Identity = 133/188 (70.74%), Postives = 153/188 (81.38%), Query Frame = 1
Query: 58 AAAETPVSGGLLKFAVGAEPPNYDCHAQSSFAFIHPVRPHYSTLLKFDTAQYPKIIGDVAESWAVAKDGLTYTFKLKKGVKFHDGSILSSEDIKATYDRIRKPPKGVLSLREEGYADITTIETPDPLTVVFKLKKPNASMLSNFASPWDCIYSAAKLKIDPNWPARNIMGTGPFTFVEHVAGSHWSGR 621
A A+TP GG+LKFAV AEPPNYDCH +SFAFIHPVRPHY+TLLKFD YPK+ GD+A+SW V+ DGLTYTFKLK +KFHDGS ++S D+KATY+RI PP GV+S+R+ Y DI IETPDP TVVFKLK NASML+NFASPWDCIYS AKLK DP +P +N+MGTGPF FVEH AGSHW G
Sbjct: 22 AEAQTPKRGGILKFAVSAEPPNYDCHGATSFAFIHPVRPHYNTLLKFDEPSYPKVKGDLAQSWTVSPDGLTYTFKLKPNIKFHDGSAMTSADVKATYERIANPPTGVVSIRKAAYEDIAAIETPDPQTVVFKLKARNASMLTNFASPWDCIYSGAKLKDDPKFPEKNVMGTGPFKFVEHAAGSHWVGE 209
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Match: A0A2W4KV89_9PROT (ABC transporter substrate-binding protein n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KV89_9PROT) HSP 1 Score: 292 bits (748), Expect = 7.290e-94 Identity = 134/186 (72.04%), Postives = 155/186 (83.33%), Query Frame = 1
Query: 64 AETPVSGGLLKFAVGAEPPNYDCHAQSSFAFIHPVRPHYSTLLKFDTAQYPKIIGDVAESWAVAKDGLTYTFKLKKGVKFHDGSILSSEDIKATYDRIRKPPKGVLSLREEGYADITTIETPDPLTVVFKLKKPNASMLSNFASPWDCIYSAAKLKIDPNWPARNIMGTGPFTFVEHVAGSHWSGR 621
A+TP GG L+FAV AEPP+YDCHA +SFAFIHPVRPHY+TLLKFD A YPK++GD+AESW + DGLTYTFKLKK VKFHDG+ ++SED+KA+Y+RIR P G S+R+ Y DI +IETPD TVVFKLK PNASML+NFASPWDCIYSAAKLK DP +P RNI+GTGPF FVEH AGSHW G
Sbjct: 24 AQTPKKGGELRFAVSAEPPDYDCHAATSFAFIHPVRPHYNTLLKFDPANYPKVVGDLAESWEQSADGLTYTFKLKKNVKFHDGTPMTSEDVKASYERIRNPQGGARSIRKAAYEDIESIETPDEYTVVFKLKAPNASMLTNFASPWDCIYSAAKLKEDPKFPERNILGTGPFKFVEHAAGSHWVGE 209
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Match: A0A1G3IPG9_9PROT (ABC transporter substrate-binding protein n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15 TaxID=1802023 RepID=A0A1G3IPG9_9PROT) HSP 1 Score: 280 bits (716), Expect = 4.530e-89 Identity = 128/188 (68.09%), Postives = 149/188 (79.26%), Query Frame = 1
Query: 58 AAAETPVSGGLLKFAVGAEPPNYDCHAQSSFAFIHPVRPHYSTLLKFDTAQYPKIIGDVAESWAVAKDGLTYTFKLKKGVKFHDGSILSSEDIKATYDRIRKPPKGVLSLREEGYADITTIETPDPLTVVFKLKKPNASMLSNFASPWDCIYSAAKLKIDPNWPARNIMGTGPFTFVEHVAGSHWSGR 621
A A+ P GG+LKFAV AEPP+YDCH +SFAFIHPVRPHYSTLLKFD +YP ++GD+A+SW V+ D L +TFKLK VKFHDGS L+S D+KA+Y+RI PP GV+S+R YADI IETPDPLTVVFKLK NA ML+ FASPWDCIYSAAKLK DP +P +NI+GTGPF F H AGSHW G
Sbjct: 22 AEAQAPKKGGILKFAVSAEPPDYDCHKNTSFAFIHPVRPHYSTLLKFDDKKYPAVVGDLAQSWQVSPDNLAFTFKLKPNVKFHDGSALTSADVKASYERIVNPPPGVISIRRASYADIGAIETPDPLTVVFKLKTANAGMLAQFASPWDCIYSAAKLKQDPKFPEKNILGTGPFKFAGHTAGSHWIGE 209 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16165.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16165.1.1 >prot_P-wetherbeei_contig16165.1.1 ID=prot_P-wetherbeei_contig16165.1.1|Name=mRNA_P-wetherbeei_contig16165.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=207bp MKTIRLLMGCVAVLFALTCAAAETPVSGGLLKFAVGAEPPNYDCHAQSSFback to top mRNA from alignment at P-wetherbeei_contig16165:1..621- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16165.1.1 ID=mRNA_P-wetherbeei_contig16165.1.1|Name=mRNA_P-wetherbeei_contig16165.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig16165:1..621- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16165:1..621- >mRNA_P-wetherbeei_contig16165.1.1 ID=mRNA_P-wetherbeei_contig16165.1.1|Name=mRNA_P-wetherbeei_contig16165.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig16165:1..621- (Phaeothamnion wetherbeei SAG_119_79)back to top |