mRNA_P-wetherbeei_contig16159.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Match: D7FKY3_ECTSI (Outer dynein arm docking complex protein oda-dc n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKY3_ECTSI) HSP 1 Score: 106 bits (265), Expect = 4.040e-23 Identity = 88/210 (41.90%), Postives = 115/210 (54.76%), Query Frame = 1
Query: 1 LKLDAVRDLDAFHNEFQDMVGQLSLSKPGDASASKAHLEAMLRQQASVMSVESMSVGGGGGSWAXXXXXXSTGRRSPAGRSPN-GREPPASASHDLRLESNMAYWVILKKKNDLQSKAARAQELQRTLKRILDATGLRGISDFVPLMLEAEEENFSLFKLINELNRELEQLEVKRSRVHNEAETLSHAARRQHQHLMKAELQQQIDRCRT 627
LK + V+DL++F EFQ M L+ +K S A LE M R + + G S XXXXXX G P G P S + L +S M++W+ILKKKNDLQ+KAAR QEL+ L++I AT L + DFVP+MLEAE+EN++LFKLINELN+E A ++ Q +K LQQQIDR R+
Sbjct: 230 LKQEVVKDLESFREEFQGMTESLAAAKEA-TQESNAKLEYMTRSRPPGAGEDEE-----GESXXXXXXXXXXXXXXXXGGPPGAGEVQPLSRAKRLHQQSIMSFWLILKKKNDLQAKAARVQELRAMLEKISAATSLTTLDDFVPVMLEAEDENYNLFKLINELNKE--------------------AGSKKSQQAVKLSLQQQIDRYRS 413
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Match: A0A835Z6M1_9STRA (Plastocyanin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M1_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.180e-18 Identity = 58/117 (49.57%), Postives = 82/117 (70.09%), Query Frame = 1
Query: 268 SASHDLRL--ESNMAYWVILKKKNDLQSKAARAQELQRTLKRILDATGLRGISDFVPLMLEAEEENFSLFKLINELNRELEQLEVKRSRVHNEAETLSHAARRQHQHLMKAELQQQI 612
S ++ +RL +S AYW IL KK+DL +KAARAQEL+ L++I A+ + +FVP M+EAEEE +SLF+LINELNRELE+L+ +R+R+ A+ L A + + KAEL+ QI
Sbjct: 284 SVTNSMRLKQQSLNAYWAILNKKSDLVAKAARAQELEDALQQICAASQGGSLEEFVPAMVEAEEEGYSLFRLINELNRELEELDAERARMAAAADALRRADASE-KSAAKAELRAQI 399
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Match: F0Y881_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y881_AURAN) HSP 1 Score: 65.1 bits (157), Expect = 8.690e-9 Identity = 44/126 (34.92%), Postives = 68/126 (53.97%), Query Frame = 1
Query: 280 DLRLESNMAYWVILKKKNDLQSKAARAQELQRTLKRILDAT-------------GLRGISDFVPLMLEAEEENFSLFKLINELNRELEQLEVKRSRVHNEAE--TLSHAARRQHQHLMKAELQQQI 612
DL+ E N AYWV+ K + DL + R +EL +I T G + VPL+L++EEEN+ +F+ INELN+ELE LE+++ + ++ E L++ R + MK EL Q+
Sbjct: 232 DLQQEVNKAYWVVAKTRMDLTKQIERKEELHSAFDKICSETKTHVDPSADPALKGKHPLEGLVPLLLKSEEENYLVFRTINELNQELETLELEKVSLEDDMEQRALANEDRLHQEENMKKELGAQL 357
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Match: A0A485LKB0_9STRA (Aste57867_20700 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKB0_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.100e-8 Identity = 41/124 (33.06%), Postives = 71/124 (57.26%), Query Frame = 1
Query: 247 NGREPPASASHDLRLESNMAYWVILKKKNDLQSKAARAQELQRTLKRILDATGLRGISDFVPLMLEAEEENFSLFKLINELNRELEQLEVKRSRVHNEAETLSHAARRQHQHLMKAELQQQIDR 618
NGRE + LR E+ W+I K+ DL+ +A R + + L +I TG++ I + ++ AEE+NFSLF +INELN E+E +E++ +R + + ++ +KA L++QI++
Sbjct: 220 NGRES-GTPDAKLRDETLKTSWLISAKEADLRKQAERLKAYEDGLAKIRKKTGIKDIGELANALMAAEEKNFSLFNMINELNTEMEAVEIENNRFQEMIDECKGSGSDLNRARIKASLEEQIEK 342
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Match: A0A7S1UCH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCH1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.170e-8 Identity = 37/116 (31.90%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 283 LRLESNMAYWVILKKKNDLQSKAARAQELQRTLKRILDATGLRGISDFVPLMLEAEEENFSLFKLINELNRELEQLEVKRSRVHNEAETLSHAARRQ--HQHLMKAELQQQIDRCR 624
LR YW I K+K DL+ EL+ L R+ +TG+ + + +P++ +EE+N+SL+ +IN+L +E+E+LEV++ + E A Q ++ +K +L++QI + R
Sbjct: 271 LRKSVAKQYWGIAKRKLDLEELDTNIVELEGNLDRLKSSTGVTDVKELIPILQSSEEQNYSLYNMINDLTKEMEELEVEKQTLDKEMSKYQDIAALQAENRQRIKRDLEEQIRKSR 386
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Match: A0A6G0WJD7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJD7_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.770e-8 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 1
Query: 283 LRLESNMAYWVILKKKNDLQSKAARAQELQRTLKRILDATGLRGISDFVPLMLEAEEENFSLFKLINELNRELEQLEVKRSRVHNEAETLSHAARRQHQHLMKAELQQQIDR 618
LR E+ W+I K+ DL+ + R + + L +I TG++ I + ++ AEE+NFSLF +INELN E+E +E++ +R + H+ +KA L++QI++
Sbjct: 216 LREETLKQSWLISAKEADLRKQTERLKAYEDGLAKIRKKTGIKDIGELANALVAAEEKNFSLFNMINELNTEMEAVEIENNRFQEMIHACQDSGSDLHRARIKASLEEQIEK 327
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Match: A0A1V9ZGL4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGL4_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 5.190e-8 Identity = 38/122 (31.15%), Postives = 70/122 (57.38%), Query Frame = 1
Query: 265 ASASHDLRLESNM--AYWVILKKKNDLQSKAARAQELQRTLKRILDATGLRGISDFVPLMLEAEEENFSLFKLINELNRELEQLEVKRSRVHNEAETLSHAARRQHQHLMKAELQQQIDRCR 624
AS + D +L + A W+I K DL+ + R + + L +I TG++ + + ++ AEE+NFSLF +INELN E+E +E++ +R + + + ++ +KA L++QI++ R
Sbjct: 222 ASGTPDAKLRDDTLKASWLISAKDADLRKQTERLRAYEDGLAKIRKKTGIKDVGELASALIAAEEKNFSLFNMINELNTEMESVEIENNRFQDMIKEVQGCGSDLNRARIKASLEEQIEKSR 343
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Match: A0A1W0AAZ0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAZ0_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.720e-7 Identity = 39/118 (33.05%), Postives = 67/118 (56.78%), Query Frame = 1
Query: 265 ASASHDLRLESNMAYWVILKKKNDLQSKAARAQELQRTLKRILDATGLRGISDFVPLMLEAEEENFSLFKLINELNRELEQLEVKRSRVHNEAETLSHAARRQHQHLMKAELQQQIDR 618
A A H R E+ A W+I K DL+ + R + + L +I TG++ + + ++ AEE+NFSLF +INELN E+E +E++ +R N + ++ +KA L++QI++
Sbjct: 212 ADAKH--REETMKASWLISAKDADLRKQTERLKAYEDGLAKIRKKTGIKDVGELANALIAAEEKNFSLFNMINELNTEMESVEIENNRFLNLIKECQGCGSDINRARIKASLEEQIEK 327
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Match: W4FFA6_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFA6_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.720e-7 Identity = 37/112 (33.04%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 283 LRLESNMAYWVILKKKNDLQSKAARAQELQRTLKRILDATGLRGISDFVPLMLEAEEENFSLFKLINELNRELEQLEVKRSRVHNEAETLSHAARRQHQHLMKAELQQQIDR 618
LR E+ W+I K+ DL+ + R + + L +I TG++ I + ++ AEE+NFSLF +INELN E+E +E++ +R + + ++ +KA L++QID+
Sbjct: 224 LRDETLKTSWLISAKEADLRKQTERLKAYEDGLAKIRKKTGIKDIGELANALMSAEEKNFSLFNMINELNTEMEAVEIENNRFQDMIVECQGSGSDINRARIKASLEEQIDK 335
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Match: A0A024UJA1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJA1_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.730e-7 Identity = 36/112 (32.14%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 283 LRLESNMAYWVILKKKNDLQSKAARAQELQRTLKRILDATGLRGISDFVPLMLEAEEENFSLFKLINELNRELEQLEVKRSRVHNEAETLSHAARRQHQHLMKAELQQQIDR 618
LR E+ W+I K+ DL+ + R + + L +I TG++ I + ++ AEE+NFSLF +INELN E+E +E++ +R + + + ++ +KA L++QI++
Sbjct: 222 LRDETLKTSWLISAKEADLRKQTERLKSYEDGLAKIRKKTGIKDIGELANALMSAEEKNFSLFNMINELNTEMEAVEIENNRFQDMIQECQGSGSDINRVRIKASLEEQIEK 333 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16159.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16159.1.1 >prot_P-wetherbeei_contig16159.1.1 ID=prot_P-wetherbeei_contig16159.1.1|Name=mRNA_P-wetherbeei_contig16159.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=209bp LKLDAVRDLDAFHNEFQDMVGQLSLSKPGDASASKAHLEAMLRQQASVMSback to top mRNA from alignment at P-wetherbeei_contig16159:58..1542- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16159.1.1 ID=mRNA_P-wetherbeei_contig16159.1.1|Name=mRNA_P-wetherbeei_contig16159.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1485bp|location=Sequence derived from alignment at P-wetherbeei_contig16159:58..1542- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16159:58..1542- >mRNA_P-wetherbeei_contig16159.1.1 ID=mRNA_P-wetherbeei_contig16159.1.1|Name=mRNA_P-wetherbeei_contig16159.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig16159:58..1542- (Phaeothamnion wetherbeei SAG_119_79)back to top |