mRNA_P-wetherbeei_contig16156.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16156.1.1
Unique NamemRNA_P-wetherbeei_contig16156.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Match: A0A522AIH2_9GAMM (Efflux RND transporter permease subunit (Fragment) n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A522AIH2_9GAMM)

HSP 1 Score: 446 bits (1147), Expect = 2.050e-150
Identity = 210/296 (70.95%), Postives = 251/296 (84.80%), Query Frame = 1
Query:  652 MAGFNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVVRTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFREDLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQGQDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKLGIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQFAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGGDI 1539
            M  FNLS WAL NR LV Y  +LLGA+G++SYFHLGQSEDPPFT R+MVV T WPGATADEVDRLVTD+IE KLQEL  LDYLRSYSRPGES++F++FREDL    + + +YQVRKKIGD+RH LP+ ++GP+FNDEF DTFGNIYAL G DFSY ELKDYA+ IR+RLLRI DVAKV+ +G QEERIYIDI+N++R +LGIPP+LIA+TLAAQN VV  G++DT  D+I +RVSGGL TVE +R LPI + GR+FR+GD+A VYR Y+DPPAPR+RFNG+PAIGIAVSM +GGDI
Sbjct:    1 MKRFNLSEWALSNRVLVGYLTLLLGALGIYSYFHLGQSEDPPFTFRVMVVNTQWPGATADEVDRLVTDRIEEKLQELDGLDYLRSYSRPGESRVFVLFREDLSPTAVSDGFYQVRKKIGDMRHLLPSGVIGPAFNDEFGDTFGNIYALTGADFSYQELKDYADSIRERLLRIADVAKVELIGQQEERIYIDIANAKRDQLGIPPELIAQTLAAQNAVVPAGAVDTVKDRIHLRVSGGLDTVEQLRQLPIHWQGRSFRLGDIATVYRGYQDPPAPRMRFNGQPAIGIAVSMRKGGDI 296          
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Match: A0A4R7NXW9_9GAMM (Multidrug efflux pump n=1 Tax=Panacagrimonas perspica TaxID=381431 RepID=A0A4R7NXW9_9GAMM)

HSP 1 Score: 460 bits (1183), Expect = 3.120e-148
Identity = 212/296 (71.62%), Postives = 255/296 (86.15%), Query Frame = 1
Query:  652 MAGFNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVVRTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFREDLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQGQDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKLGIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQFAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGGDI 1539
            M   NLS WAL NR LV YFMVLLG +GVW YFHLGQSEDPPFT R+MVVRT WPGATADEVDRLVTD+IE KLQEL +LD+LRSYSRPGESQ+F+++RED+   T+P+++YQ RKK+ DIRH LP  ++GPSFNDEF DTFGNIYALQG+DFSY ELKDYA+R+RDRLLR+ DVAKV+F+GLQEERI++D++N+RRA+LGIPP LIA  LA QN+V   G  DT+TDKI++RVSGGL+ V+ ++ LPI+F GRTFR+GDVAE+ R Y+DPP PR+RFNGE AIGIAVSME+GGDI
Sbjct:    1 MTRINLSEWALANRSLVTYFMVLLGVLGVWGYFHLGQSEDPPFTFRIMVVRTIWPGATADEVDRLVTDRIEEKLQELDSLDFLRSYSRPGESQVFVLYREDVARSTIPDSWYQTRKKVNDIRHLLPPGVIGPSFNDEFGDTFGNIYALQGKDFSYEELKDYADRVRDRLLRVRDVAKVEFIGLQEERIFVDMANTRRAQLGIPPDLIARVLAQQNDVSPAGDFDTSTDKIYLRVSGGLSRVDQLKQLPIEFNGRTFRLGDVAEISRGYQDPPGPRMRFNGENAIGIAVSMEKGGDI 296          
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Match: A0A1M5NRW4_9GAMM (Multidrug efflux pump n=1 Tax=Hydrocarboniphaga daqingensis TaxID=490188 RepID=A0A1M5NRW4_9GAMM)

HSP 1 Score: 405 bits (1042), Expect = 1.460e-127
Identity = 192/296 (64.86%), Postives = 238/296 (80.41%), Query Frame = 1
Query:  652 MAGFNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVVRTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFREDLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQGQDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKLGIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQFAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGGDI 1539
            M GFNLS WAL NR LV +FMVL   +G  +Y +LGQSEDPPFT R+MV++T+WPGATADEVDRLVTD+IE KL EL  LDY+RSYSRPGES + I+ R+DLP   M E++YQ+RKKIGDIR  LP+ I+GP+FNDEF DT+GNIYAL G+DFSY ELKDYA+RIR+RLLR+P VAKV FLGLQ+ER++ID++N++R +LGIP   +   L AQN VV+ GS DT  ++I VRVSG L T+E+VR LPI   GRT R+GD+A VYR Y+DPPA R+R +GE AIG++VSME+GG I
Sbjct:    1 MGGFNLSQWALNNRTLVIFFMVLCALMGTQAYLNLGQSEDPPFTFRVMVIQTSWPGATADEVDRLVTDRIEEKLLELETLDYVRSYSRPGESVVTIVIRDDLPPAAMEESFYQIRKKIGDIRFRLPSNIIGPNFNDEFGDTYGNIYALTGKDFSYEELKDYADRIRERLLRVPQVAKVDFLGLQDERLFIDLANAKRGQLGIPLNAVVAALQAQNAVVATGSFDTTRERIHVRVSGRLQTLEEVRQLPISDQGRTLRLGDIANVYRGYQDPPATRMRVDGERAIGVSVSMEKGGHI 296          
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Match: I7ZAK5_9GAMM (Acriflavin resistance protein n=1 Tax=Hydrocarboniphaga effusa AP103 TaxID=1172194 RepID=I7ZAK5_9GAMM)

HSP 1 Score: 397 bits (1020), Expect = 2.160e-124
Identity = 187/293 (63.82%), Postives = 234/293 (79.86%), Query Frame = 1
Query:  661 FNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVVRTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFREDLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQGQDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKLGIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQFAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGGDI 1539
            FNLS WAL NRPLV +FMVLL  +GV +Y  LGQSEDPPFT R+MV++T WPGA+ADE+DRLVTD+IE KL EL  LD++RSYSRPGES + II R+DLP   M E++YQ+RKKIGDIR  LPA IVGP FNDEF DTFGNIYAL G +FSY ELKDY +RIRDRLLR+P VAKV FLG QEER+++D++N++R +LGIP   +   L +QN +V+ GS DT  ++I+ RVSG L +V+D+RNLPI   GR+ R+GD+A++YR Y+DPPA R+R NG  A+GI+VSME+GG I
Sbjct:    3 FNLSEWALANRPLVIFFMVLLAVMGVRAYTSLGQSEDPPFTFRVMVIQTYWPGASADEMDRLVTDRIEEKLLELETLDFVRSYSRPGESVVTIIIRDDLPPSAMQESFYQIRKKIGDIRGRLPAGIVGPLFNDEFGDTFGNIYALTGPEFSYEELKDYGDRIRDRLLRVPQVAKVDFLGTQEERVFVDLANAKRGQLGIPLTSVVNALQSQNAIVATGSFDTPLERIYTRVSGRLQSVDDLRNLPIAADGRSVRLGDIADIYRGYQDPPATRMRVNGVSALGISVSMEKGGHI 295          
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Match: A0A5C7L5H3_9GAMM (Efflux RND transporter permease subunit n=1 Tax=Sinobacteraceae bacterium TaxID=1969813 RepID=A0A5C7L5H3_9GAMM)

HSP 1 Score: 385 bits (989), Expect = 7.650e-120
Identity = 183/296 (61.82%), Postives = 226/296 (76.35%), Query Frame = 1
Query:  652 MAGFNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVVRTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFREDLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQGQDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKLGIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQFAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGGDI 1539
            M  FNLS WAL NR LV Y M+LLG  G WSY+HLGQSEDPPFT  +MVVRT WPGATA EV+R VTD+IEAKLQE   L+YL SYSRPGESQ+F + +ED     + + +YQVRKKI DIR TLP  +VGP FNDEF DT+GNIYAL G+DFSY EL+DY + IR RLLR+ DVAKV+F GLQ+E+I + I N++RA+ G+P  LI   + AQN V   G  +T +D+I++RV+GGL  VED+RN PI++ GRTFR+ D+AEV R Y DPP  R+RF+G+P IGI VSM++GGDI
Sbjct:    1 MRSFNLSEWALANRSLVVYAMMLLGIAGAWSYWHLGQSEDPPFTFPVMVVRTYWPGATAAEVEREVTDRIEAKLQEHEQLNYLNSYSRPGESQVFFVVQEDRKGVPIEQVHYQVRKKIDDIRQTLPEGVVGPFFNDEFGDTYGNIYALTGKDFSYRELQDYGDAIRRRLLRVKDVAKVEFFGLQDEKIEVRIDNTKRAEFGVPAHLIFNAVQAQNAVTPAGFFETGSDRIYIRVTGGLRNVEDIRNTPIRYNGRTFRVRDIAEVSRGYSDPPQARMRFDGQPCIGIGVSMKKGGDI 296          
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Match: UPI0019B9BAB2 (Efflux RND transporter permease subunit n=1 Tax=Luteimonas sp. TaxID=1873125 RepID=UPI0019B9BAB2)

HSP 1 Score: 361 bits (926), Expect = 5.040e-118
Identity = 172/293 (58.70%), Postives = 216/293 (73.72%), Query Frame = 1
Query:  661 FNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVVRTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFREDLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQGQDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKLGIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQFAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGGDI 1539
            FNLS WALR+R LV Y +V    IG WSY  LGQSEDPPFT ++MVVRT WPGATADEV R V+D+IE KL E    +Y+RSYSRPGESQI  + R+ + +  +P  +YQVRKK+GDIR TLP  +VGP FNDEF DTFGNIYA+ G+ F YA LKDYAERI   L R+PDV KV+ LGLQ+E+++I++SN++ A LG+P   +   L  QN + S    +T TD++ +RV+G   TVE++R+ PI+   RTFRIGDVA V R + DPPAPR+RF GE AIGIAV+M+ GGDI
Sbjct:    3 FNLSEWALRSRGLVLYAIVAFALIGAWSYQRLGQSEDPPFTFKIMVVRTLWPGATADEVARQVSDRIEKKLMETGEYEYIRSYSRPGESQIIFVARDSMLSKELPTLWYQVRKKVGDIRQTLPQGVVGPFFNDEFGDTFGNIYAITGEGFDYAVLKDYAERIELELQRVPDVGKVELLGLQDEKVFIELSNTKLATLGVPLTAVQSALDQQNVIASASFFETPTDRVQLRVAGRFETVEEIRDFPIRVGDRTFRIGDVATVRRGFSDPPAPRMRFMGEDAIGIAVAMKNGGDI 295          
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Match: A0A8J7PVB7_9GAMM (Efflux RND transporter permease subunit n=2 Tax=Rudaea TaxID=886360 RepID=A0A8J7PVB7_9GAMM)

HSP 1 Score: 380 bits (976), Expect = 1.450e-117
Identity = 177/296 (59.80%), Postives = 231/296 (78.04%), Query Frame = 1
Query:  652 MAGFNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVVRTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFREDLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQGQDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKLGIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQFAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGGDI 1539
            M GFNLS W+LRN+PL+ YF+VL  A+GVWSY  LGQSEDPPFT ++MVV+T WPGATA EV   VT+KIE KLQEL  +DYLRSYSRPGES +F++ ++ LPA  +P+ +YQVRKKIGDIR+TLP  I+GP +NDEF DTFGNIYAL G+ +S A+L+DYAER++  LLR+PDVAKVQFLGLQ+E++ I++SN++ A LG+    + +TLAAQN +   GS +T  D+I++R +G   +VE +RN+ I+  G  FR+GD+A V R Y DPP PR+RF G+ ++GIAVSM  GGDI
Sbjct:    1 MTGFNLSEWSLRNQPLLRYFIVLFAALGVWSYMGLGQSEDPPFTFKVMVVQTQWPGATAAEVTEQVTEKIEKKLQELPQVDYLRSYSRPGESMVFVVIKDSLPAGDVPDFFYQVRKKIGDIRYTLPQGILGPFYNDEFGDTFGNIYALTGEGYSDAQLRDYAERLKLELLRVPDVAKVQFLGLQDEKVTIELSNAKLATLGVSFNQLQQTLAAQNAITPAGSFETGADRIYLRPTGAFDSVEAIRNISIRANGNLFRLGDIANVTRGYADPPNPRMRFMGKNSLGIAVSMRAGGDI 296          
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Match: A0A658G2L3_9PSED (AcrB/AcrD/AcrF family protein (Fragment) n=1 Tax=Pseudomonas sp. SST3 TaxID=2267882 RepID=A0A658G2L3_9PSED)

HSP 1 Score: 354 bits (909), Expect = 3.420e-116
Identity = 164/293 (55.97%), Postives = 224/293 (76.45%), Query Frame = 1
Query:  661 FNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVVRTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFREDLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQGQDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKLGIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQFAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGGDI 1539
            FNLSAWAL NR +V Y M+L+  +G  SY  LGQSEDPPFT + MV++T WPGATA+EV + VT++IE KL E    + + S+SRPGES +  + R+ + ++ +P+ +YQ+RKKIGDIRH LPA + GP FNDEF  TFGNIYAL GQ F YA LKDYA+RI+ +L R+ +V KV+ +GLQ+E+I+I++SN + A LG+P + + + L AQN V+S G ++T +D++ +RV+G   TV+++R+ PI+ AG TFRIGDVAEVYR + DPPAPR+R+ GEPAIG+AVSM+ GGDI
Sbjct:    3 FNLSAWALGNRQIVVYLMLLMAVVGALSYSKLGQSEDPPFTFKAMVIQTQWPGATAEEVSQQVTERIEKKLMETGEYERIVSFSRPGESNVTFMARDSMHSEQIPDLWYQIRKKIGDIRHALPAGVQGPFFNDEFGTTFGNIYALTGQGFDYAVLKDYADRIQLQLQRVANVGKVELIGLQDEKIWIELSNVKLANLGVPLEAVKQALEAQNTVMSAGFVETPSDRVQLRVTGSFETVKEIRDFPIRVAGSTFRIGDVAEVYRGFNDPPAPRMRYMGEPAIGLAVSMKPGGDI 295          
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Match: A0A411HFG6_9GAMM (Efflux RND transporter permease subunit n=1 Tax=Pseudolysobacter antarcticus TaxID=2511995 RepID=A0A411HFG6_9GAMM)

HSP 1 Score: 373 bits (957), Expect = 1.130e-114
Identity = 173/293 (59.04%), Postives = 227/293 (77.47%), Query Frame = 1
Query:  661 FNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVVRTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFREDLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQGQDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKLGIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQFAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGGDI 1539
            FNLS WALRN+ LV YF+V+L   G+W+Y  LGQSEDPPFT ++MV++T WPGATA EV   VT++IE KLQEL  LDYLRSYSRPGESQ+F + ++ +P   + + +YQVRKKIGDIR+TLP+ ++GP+FNDEF DTFGNIYAL    FSYA+++DYAERI+  LLR+P+VAKV  +GLQ+E+I+I++SN++ A LG+    + + L +QN V + GS +TATD+I++R SG   TVE +R++ I+  GR FR+GDVAEV   Y DP  PR+RFNG+ AIGIAVSM  GGDI
Sbjct:   19 FNLSEWALRNQALVRYFIVILAIAGIWAYSGLGQSEDPPFTFKVMVIQTVWPGATAAEVTEQVTERIEKKLQELPELDYLRSYSRPGESQVFFVIKDSVPGARVQDIWYQVRKKIGDIRYTLPSTVIGPNFNDEFGDTFGNIYALTSDGFSYAQMRDYAERIKLELLRVPNVAKVDLIGLQDEKIFIEVSNAKLATLGVSFAQVQQVLQSQNAVTAAGSFETATDRIYMRPSGAFDTVESIRDISIRANGRLFRLGDVAEVKHGYTDPAQPRMRFNGKEAIGIAVSMRDGGDI 311          
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Match: UPI001BF1816F (Uncharacterized protein n=1 Tax=Pseudomonas sp. Eqa60 TaxID=2799184 RepID=UPI001BF1816F)

HSP 1 Score: 350 bits (899), Expect = 1.400e-114
Identity = 170/292 (58.22%), Postives = 216/292 (73.97%), Query Frame = 1
Query:  658 GFNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVVRTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFREDLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQGQDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKLGIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQFAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGG 1533
            GFNLSAWALRNR +V + M+LL  +G  SY  LGQSEDPPFT + MV+RT WPGATA EV R VT++IE KL E    D + S+SRPGESQ+  I R+ + ++ +PE +YQVRKKI DIR TLP  I GP FNDEF  TFGNIYAL GQ F YA LKDYA+RI+ +L R+ DV KV  LGLQ+E+I+I++SN + A LG+P   + + L  QN V + G  +T ++++ +RVSG   TVE +RN PI+ AGRTFRIGDVA+V R + DPPAPR+RF GE AIG+AV+M++GG
Sbjct:    2 GFNLSAWALRNRQIVLFLMLLLAIVGALSYTKLGQSEDPPFTFKAMVIRTNWPGATAQEVSRQVTERIEKKLMETGEYDRIVSFSRPGESQVTFIARDSMHSNEVPELWYQVRKKISDIRQTLPPGIQGPFFNDEFGTTFGNIYALTGQGFDYAVLKDYADRIQIQLQRVKDVGKVDLLGLQDEKIWIELSNVKLATLGLPLAAVQQALEEQNAVSTAGFFETPSERVQLRVSGNFQTVEQIRNFPIRVAGRTFRIGDVADVRRGFNDPPAPRMRFMGEDAIGLAVAMKEGG 293          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16156.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A522AIH2_9GAMM2.050e-15070.95Efflux RND transporter permease subunit (Fragment)... [more]
A0A4R7NXW9_9GAMM3.120e-14871.62Multidrug efflux pump n=1 Tax=Panacagrimonas persp... [more]
A0A1M5NRW4_9GAMM1.460e-12764.86Multidrug efflux pump n=1 Tax=Hydrocarboniphaga da... [more]
I7ZAK5_9GAMM2.160e-12463.82Acriflavin resistance protein n=1 Tax=Hydrocarboni... [more]
A0A5C7L5H3_9GAMM7.650e-12061.82Efflux RND transporter permease subunit n=1 Tax=Si... [more]
UPI0019B9BAB25.040e-11858.70Efflux RND transporter permease subunit n=1 Tax=Lu... [more]
A0A8J7PVB7_9GAMM1.450e-11759.80Efflux RND transporter permease subunit n=2 Tax=Ru... [more]
A0A658G2L3_9PSED3.420e-11655.97AcrB/AcrD/AcrF family protein (Fragment) n=1 Tax=P... [more]
A0A411HFG6_9GAMM1.130e-11459.04Efflux RND transporter permease subunit n=1 Tax=Ps... [more]
UPI001BF1816F1.400e-11458.22Uncharacterized protein n=1 Tax=Pseudomonas sp. Eq... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16156contigP-wetherbeei_contig16156:6..1544 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1123073.KB899241_gene2169
PFAMsACR_tran
Model size1539
Max annot lvl135614|Xanthomonadales
KEGG koko:K18303
KEGG TC2.A.6.2.17
KEGG ModuleM00642
Hectar predicted targeting categorysignal peptide
Exons1
Evalue7.36e-122
EggNOG OGsCOG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,1RMBN@1236|Gammaproteobacteria,1X41A@135614|Xanthomonadales
DescriptionBelongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Cds size888
COG categoryV
BRITEko00000,ko00002,ko01504,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186078.717966-CDS-P-wetherbeei_contig16156:5..8931683186078.717966-CDS-P-wetherbeei_contig16156:5..893Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16156 6..893 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186078.7335732-UTR-P-wetherbeei_contig16156:893..15441683186078.7335732-UTR-P-wetherbeei_contig16156:893..1544Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig16156 894..1544 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16156.1.1prot_P-wetherbeei_contig16156.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16156 6..893 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16156.1.1

>prot_P-wetherbeei_contig16156.1.1 ID=prot_P-wetherbeei_contig16156.1.1|Name=mRNA_P-wetherbeei_contig16156.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=296bp
MAGFNLSAWALRNRPLVAYFMVLLGAIGVWSYFHLGQSEDPPFTLRLMVV
RTAWPGATADEVDRLVTDKIEAKLQELYALDYLRSYSRPGESQIFIIFRE
DLPADTMPENYYQVRKKIGDIRHTLPAAIVGPSFNDEFADTFGNIYALQG
QDFSYAELKDYAERIRDRLLRIPDVAKVQFLGLQEERIYIDISNSRRAKL
GIPPQLIAETLAAQNEVVSGGSLDTATDKIFVRVSGGLTTVEDVRNLPIQ
FAGRTFRIGDVAEVYRAYEDPPAPRLRFNGEPAIGIAVSMEQGGDI
back to top

mRNA from alignment at P-wetherbeei_contig16156:6..1544-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16156.1.1 ID=mRNA_P-wetherbeei_contig16156.1.1|Name=mRNA_P-wetherbeei_contig16156.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1539bp|location=Sequence derived from alignment at P-wetherbeei_contig16156:6..1544- (Phaeothamnion wetherbeei SAG_119_79)
AGTCAATACGATCTCGCCGCCAACCAGTCCCGCTATACCAATCTCACCGC CGATGCGGCTGGCGTTGTCACGCAGGTCATGGCCGAACCCGGTAATGTGG TGAGCGCCGGCCAGCCCGTGCTGCGTTTCGCCGCCGATGGCGAGCGCGAG GTTTATGTGAACGTGCCCGAGGGTCGCATCGAAACGCTGCGCCAGGCCAG CACTATCGCCATCGAATTATTGAGCAATCCGGGGCATCACTATCAGGGCC GCGTGCGTGACATCGACCCGCAGGCCGACACTGCCACCCGCACTCATCTG GCGCGCGTGACCCTGCTCGACGCCGATCACCATGTGCAGCTCGGCGCAAG CGCCACCGTATTGCTGCTCGCGCAAGCGCAAGCCCATAGCTTCCGCCTGC CGGCTACCGCGCTCGGCAACCTCGACGCCAACCGTCCTGCTGTCTGGCGG ATCCGCGACAGCGATGCAGGCGCGACCGTTGAGCCGGTGGCAGTAGAAGT GCTGCGCTATCTCGATGGCGAAGTGCTGATCAGTGGGCCACTGTCCATTG AGGACCGGCTGGTCAGCGCTGGTGTGCATCGTCTCAGCGCCGGCATGGCG GTGCAGGCCATCGATCGCGCCGCCAAGGCCGCACTATAACTTCGCACGCC CATGGCCGGCTTTAATCTGAGCGCGTGGGCGCTGCGCAATCGCCCGCTGG TCGCCTATTTCATGGTGCTGCTTGGCGCCATCGGGGTGTGGTCCTATTTT CACCTCGGCCAGTCGGAAGACCCGCCGTTCACGCTCCGCCTGATGGTCGT GCGCACCGCCTGGCCGGGCGCGACCGCCGATGAAGTCGACCGCCTCGTCA CCGACAAAATCGAAGCCAAGCTGCAAGAACTCTACGCGCTCGATTACTTA CGTTCCTACTCGCGTCCCGGTGAATCTCAGATCTTCATCATCTTCCGCGA AGACCTGCCGGCCGACACCATGCCGGAGAACTACTATCAGGTGCGCAAGA AAATTGGCGACATCCGCCATACGCTGCCGGCAGCTATCGTCGGCCCGTCG TTCAACGACGAATTCGCCGACACCTTCGGCAATATCTACGCCTTGCAAGG CCAGGATTTCAGCTATGCCGAATTGAAGGACTACGCCGAGCGCATACGTG ATCGCCTGCTGCGCATCCCCGACGTGGCCAAGGTGCAGTTCCTGGGTCTG CAGGAAGAACGCATCTATATCGATATCAGCAATAGCCGCCGCGCCAAGCT CGGCATTCCGCCACAACTGATCGCCGAGACCCTTGCAGCGCAGAATGAAG TGGTGAGCGGCGGCTCACTCGACACCGCCACCGACAAGATATTCGTGCGC GTCAGTGGCGGCCTGACCACGGTCGAGGACGTACGCAATCTGCCCATTCA GTTCGCCGGGCGTACCTTTCGCATCGGCGACGTTGCCGAGGTCTATCGCG CTTACGAAGACCCGCCCGCGCCACGCCTGCGCTTCAATGGTGAACCCGCC ATCGGCATCGCGGTGTCGATGGAACAGGGTGGTGACATC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig16156:6..1544-

>mRNA_P-wetherbeei_contig16156.1.1 ID=mRNA_P-wetherbeei_contig16156.1.1|Name=mRNA_P-wetherbeei_contig16156.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=888bp|location=Sequence derived from alignment at P-wetherbeei_contig16156:6..1544- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGGCTTTAATCTGAGCGCGTGGGCGCTGCGCAATCGCCCGCTGGT
CGCCTATTTCATGGTGCTGCTTGGCGCCATCGGGGTGTGGTCCTATTTTC
ACCTCGGCCAGTCGGAAGACCCGCCGTTCACGCTCCGCCTGATGGTCGTG
CGCACCGCCTGGCCGGGCGCGACCGCCGATGAAGTCGACCGCCTCGTCAC
CGACAAAATCGAAGCCAAGCTGCAAGAACTCTACGCGCTCGATTACTTAC
GTTCCTACTCGCGTCCCGGTGAATCTCAGATCTTCATCATCTTCCGCGAA
GACCTGCCGGCCGACACCATGCCGGAGAACTACTATCAGGTGCGCAAGAA
AATTGGCGACATCCGCCATACGCTGCCGGCAGCTATCGTCGGCCCGTCGT
TCAACGACGAATTCGCCGACACCTTCGGCAATATCTACGCCTTGCAAGGC
CAGGATTTCAGCTATGCCGAATTGAAGGACTACGCCGAGCGCATACGTGA
TCGCCTGCTGCGCATCCCCGACGTGGCCAAGGTGCAGTTCCTGGGTCTGC
AGGAAGAACGCATCTATATCGATATCAGCAATAGCCGCCGCGCCAAGCTC
GGCATTCCGCCACAACTGATCGCCGAGACCCTTGCAGCGCAGAATGAAGT
GGTGAGCGGCGGCTCACTCGACACCGCCACCGACAAGATATTCGTGCGCG
TCAGTGGCGGCCTGACCACGGTCGAGGACGTACGCAATCTGCCCATTCAG
TTCGCCGGGCGTACCTTTCGCATCGGCGACGTTGCCGAGGTCTATCGCGC
TTACGAAGACCCGCCCGCGCCACGCCTGCGCTTCAATGGTGAACCCGCCA
TCGGCATCGCGGTGTCGATGGAACAGGGTGGTGACATC
back to top