mRNA_P-wetherbeei_contig1612.2.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Match: A0A835YNG3_9STRA (Sodium/hydrogen exchanger n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG3_9STRA) HSP 1 Score: 236 bits (603), Expect = 1.090e-64 Identity = 124/267 (46.44%), Postives = 180/267 (67.42%), Query Frame = 3
Query: 171 GPEAVGIGIMVFCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMLAQVMGMSGIVAILIAGVTSRHYAYNNLSSDDNRDLADFIFRFLAFLTENATFLYLGISVCGVPAVGASFNAKFIMWTFLACLLSRAVAVFGLCTLMNAFSCCTGMYKIGWRSQVVVWFAGLRGAVAFAAVSVFPDEEGNRDLMRTTTISVIVLFTFIVAPWTVPLLRALKIPMNVDYRTIVVPPRNKFYQWLADVDEKWVQPRLLRK 971
G AV IG F II++GS IGY+ L L++ ++R VLE+++Y + Y+PY+LA+++G SGIVAIL+AG+T+R YA+ NLSS ++ ADF FR +FL +NA F+Y+G++V G+ + FN F+ WTF CL+SRAV V L ++N S + + IG +Q+V+WFAGLRGAVAFAA S FPD GN + + TTT+ I++FTF+VAP T+PL++ L +PMNV+Y T P + +WL DE+++ L+RK
Sbjct: 208 GSTAVWIGFADFIIILLGSCAIGYVVPCITTLLLRRVDLRGHVVLEMSVYLLMAYVPYVLAEIVGQSGIVAILMAGITTRSYAHRNLSSRKTQEFADFFFRLCSFLADNAVFVYMGMTVFGLNDIKHEFNFGFVFWTFFGCLVSRAVVVIVLSKVINVLSSYSNLNPIGKNNQIVLWFAGLRGAVAFAAASNFPDVLGNANAVLTTTVGTIMIFTFVVAPLTMPLIKKLGMPMNVEYETTRPPRMPRLVRWLHAFDERFIDQVLIRK 474
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Match: A0A835YL00_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL00_9STRA) HSP 1 Score: 204 bits (518), Expect = 2.800e-53 Identity = 121/324 (37.35%), Postives = 183/324 (56.48%), Query Frame = 3
Query: 81 ATRPARLLATNYKPIDRPASTVLRSAAPLQGPEAVGIGIMVFCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMLAQVMGMSGIVAILIAGVTSRHYAYNNLSSDDNRDLADFIFRFLAFLTENATFLYLGISVCGVPAVGASFNAKFIMWTFLACLLSRAVAVFGLC---------------------------TLMNAFSCCTGMYKIGWRSQVVVWFAGLRGAVAFAAVSVFPDEEGNRDLMRTTTISVIVLFTFIVAPWTVPLLRALKIPMNVDYRTIVVPPRNKFYQWLADVDEKWVQPRLLRK 971
+T P +LA + PA L + VG GI F II +GS +IG+L LK+A +R VLEL++Y + Y+PY+LAQ++GMSGIVAIL+AGVT R Y + NLSS ++ ADF +R A+L +NA FLYLG+SV G+ +F+ ++ W ACL+SR V+V L ++N T + ++ +++Q V+WFAGLRGAVAFAA S F D G ++ TTT+ +++++ FI+AP T+P++++L +PMNV Y P + +W+ +D K++ L+ K
Sbjct: 164 STDPVAVLAILGQLRVEPALFFLVFGESVLNDAEVGAGIADFIIICLGSCVIGFLVPCISTYVLKRAELRGHVVLELSVYLLMSYVPYVLAQIVGMSGIVAILVAGVTMRTYTHRNLSSRHAQEYADFFYRICAYLADNAVFLYLGMSVFGLHIFVENFDVGYVCWALFACLVSRGVSVVVLSGXXXXXXXXXXXXXXXXXXXXXXXXXSVIINVLVPYTNLNRVAYKNQFVLWFAGLRGAVAFAAASNFTDVSGKHGIVVTTTMGIVIVYNFIMAPLTMPIIKSLGMPMNVKYENSQPPRMPRLGRWVYQIDRKYIDTFLICK 487
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Match: A0A7S2W039_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W039_9STRA) HSP 1 Score: 158 bits (399), Expect = 4.830e-39 Identity = 99/262 (37.79%), Postives = 152/262 (58.02%), Query Frame = 3
Query: 177 EAVGIGIMVFCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMLAQVMGMSGIVAILIAGVTSRHYAYNNLSSDDNRDLADFIFRFLAFLTENATFLYLGISVCGVPAVGASFNAKFIMWTFLACLLSRAVAVFGLCTLMNAFSCCTGMYKIGWRSQVVVWFAGLRGAVAFAAVSVFPDEEGNRDLMRTTTISVIVLFTFIVAPWTVPLLRALKIPMNVDYRTIVVPPRNKFYQWLADVDEKWVQPRL 962
E + I + F I +GS IG+L G A+A K+ + R+ V+E+A Y LVYLPY++A+ + MSGIVA L AG+ ++HYA+ NLS + F F+ A+LTE A FLYLG+SV + + + + W+ CLL+RA+ ++ L ++N I Q ++WF+GLRGAVAFA VFP+ +GNRD + TT++++++ F + TVP+L+ LKI + VD P + Q + D + + P L
Sbjct: 24 ETMFIAMADFITIFLGSLFIGFLMGCIAAIASKRIDFREHVVVEMACYFLLVYLPYLVAEALEMSGIVATLFAGIFTKHYAHPNLSPSSQIQIQLF-FKTFAYLTETAVFLYLGLSVFRLHFLN-HYYSSLNFWSIFLCLLARALHIYPLSYVLNRSRRDVDQ-PIDRNKQHMLWFSGLRGAVAFACAQVFPNTKGNRDAILVTTMTIVLITVFTLGSATVPMLKLLKIDIGVDEDAFESAPPSACTQSMLSFDRRVLMPLL 282
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Match: F0WWA2_9STRA (Sodium/hydrogen exchanger n=4 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WWA2_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.840e-32 Identity = 96/253 (37.94%), Postives = 147/253 (58.10%), Query Frame = 3
Query: 204 FCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMLAQVMGMSGIVAILIAGVTSRHYAYNNLSSDDNRDLADFIFRFLAFLTENATFLYLGISVCGVPAVGASFNAKFIMWTFLACLLSRAVAVFGLCTLMNAFSCCTGMYKIGWRSQVVVWFAGLRGAVAFAAVSVFPDEEGNRDLMRTTTISVIVLFTFIVAPWTVPLLRALKIPMNVDYRTIVVPPRNKFYQ--WLADVDEKWVQP 956
F ++ VGST+IG G+ AL K +N++ + E+ +Y VYLP+ +AQ++ MSG+VAI+ AG+ +HYA NLS + +++ +F +A+L E A FL LG+SV A+ +N FI++T + CL++RA V+ L L+N G KI Q ++W++GLRGAVAFA FP E+ N + TT+ +I+L F++ TV +L ALKIP + + K YQ L D K++ P
Sbjct: 248 FGLVFVGSTLIGVAFGMLPALLFKFSNLKSCLMHEVGVYVMFVYLPFTIAQILEMSGVVAIIFAGIAMKHYASPNLSKEA-QEICSRVFETIAYLAETAVFLNLGLSVF---ALQNGYNIIFIVFTAVFCLIARACNVYPLTALLNKRK---GAAKITRNQQHMIWYSGLRGAVAFALAKSFPGEKRNEII--ATTMIIILLSIFVMGGGTVSMLNALKIPRLTPEEELALDQTVKPYQNMRLLQFDNKYLIP 491
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Match: A0A6U0VRU5_9STRA (Sodium/hydrogen exchanger n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VRU5_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.800e-32 Identity = 98/265 (36.98%), Postives = 148/265 (55.85%), Query Frame = 3
Query: 189 IGIMVFCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMLAQVMGMSGIVAILIAGVTSRHYAYNNLSSDDNRDLADFIFRFLAFLTENATFLYLGISVCGVPAVGASFNAKFIMWTFLACLLSRAVAVFGLCTLMNAF--SCCTGMYKIGWRSQVVVWFAGLRGAVAFAAVSVFPDEEGNRDLMRTTTISVIVLFTFIVAPWTVPLLRALKIPMNVDY-----RTIVVPPRNKFYQWLADVDEKWVQPRL 962
I I+ F II V ST+IG L GV AL K + Q RV+E+ ++ L+Y+P++ AQ +G+SGIVAIL G+ +R Y LS + ++ LAD R L+ E A FL LG++V + + F W ACL+SR V V + T +N + + I ++ +++WFAGLRGAVA+AA S+FPD GNR ++++ T+ ++++ F++ T L R LKIP N R VP R + L ++ + P L
Sbjct: 334 IAILDFAIIFVSSTLIGILSGVLTALLFKSLEI-QDRVVEICVFLLLMYIPFLFAQALGVSGIVAILFMGIAARRYVRPRLS-EYSQYLADEFSRVLSHGFEAAVFLNLGLTVFNIDDGSKKMDMAF--WALFACLVSRGVLVSVIVTCVNCLRRTPSSTTRPITFKESILIWFAGLRGAVAYAAASLFPDVNGNRAVVKSATMIIVIVTVFVMGGLTEDLCRVLKIPTNPGQSPAGDRVGFVPNRGGLHSLLLSFEKHCINPLL 594
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Match: A0A1E7F6W0_9STRA (Sodium/hydrogen exchanger n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6W0_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.020e-29 Identity = 90/237 (37.97%), Postives = 132/237 (55.70%), Query Frame = 3
Query: 195 IMVFCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMLAQVMGMSGIVAILIAGVTSRHYAYNNLSSDDNRDLADFIFRFLAFLTENATFLYLGISVCGVPAVGASFNAKFIMWTFLACLLSRAVAVFGLCTLMNAFSCCTGMYKIGWRSQV---------VVWFAGLRGAVAFAAVSVFPDEEGNRDLMRTTTISVIVLFTFIVAPWTVPLLRALKIPMNVD 878
++V C++ S I+G + M LA K MR +VLEL+LY VY+P+ML++++ +SG++ I G+ +R Y N+S ++ R+ A IFR LAFL E FL LG+SVCG+ F+ F+ W F+A LL RA+ V+ L KI R + ++WFAGLRGAVA+A FPD G+RD T+ ++V+ ++ T PL+ L I MNVD
Sbjct: 164 LLVQCVV---SPILGLVFASLMGLAFKHGRMRDHKVLELSLYIMPVYIPFMLSELLELSGMITIFFTGIFARRYMEPNVS-EETREYARIIFRLLAFLAEVCIFLELGLSVCGMHK--GHFSWPFVSWAFVAALLGRAIGVYPL--------------KIPERKRDKIIPVKFMHLLWFAGLRGAVAYACAREFPDVYGHRDEFIAATMVIVVITIVLMGGATEPLMDRLGIRMNVD 380
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Match: W7TPA0_9STRA (Sodium/hydrogen exchanger n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPA0_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.700e-29 Identity = 92/270 (34.07%), Postives = 148/270 (54.81%), Query Frame = 3
Query: 180 AVGIGIMVFCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMLAQVMGMSGIVAILIAGVTSRHYAYNNLSSDDNRDLADFIFRFLAFLTENATFLYLGISVCGVPAVGASFNAKFIMWTFLACLLSRAVAVFGLCTLMNAFSCCTGMYKIGWRSQVVVWFAGLRGAVAFAAVSVFPDEEGNRDLMRTTTISVIVLFTFIVAPWTVPLLRALKIPMNVDYRTIVVPPRNKFYQWLADVDEKWVQPRLLRKQHTESE 989
++G I+ F II GS +G+L G AL K ++R + + E+ +Y L Y+P + + +SGIV IL G+ SRHY + NLS + LA FIF LA L+E A FL LG+SV F+ I+WT L L+ RA+ ++ + L+N F+ K+G Q ++WFAGLRGA+A+A F + GN+ ++ TT+ ++++ F +T+ +L ++IP+ V V N+ + ++EK++ P L R S+
Sbjct: 209 SMGFAIVDFLIIFFGSMAVGFLFGCLSALLFKHIDLRHS-IYEMGVYLLLAYIPSLFGTAIELSGIVCILFTGMFSRHYTHRNLSVK-GQALAFFIFSLLAVLSETAVFLELGLSV--FSGEKEYFHPLLIIWTLLLILIGRALNIYPISFLVNRFT----SVKVGRNVQHMLWFAGLRGAMAYACSKQFSNVFGNQPIIEATTMVIVLITVFGFGTFTITMLEKMEIPLGVPATDAVNLSENQ--SRILALEEKYLVPLLQRPLEFSSQ 468
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Match: A0A7S1BYP6_9STRA (Sodium/hydrogen exchanger n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYP6_9STRA) HSP 1 Score: 133 bits (334), Expect = 8.340e-29 Identity = 93/283 (32.86%), Postives = 138/283 (48.76%), Query Frame = 3
Query: 204 FCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMLAQVMGMSGIVAILIAGVTSRHYAYNNLSSDDNRDLADFIFRFLAFLTENATFLYLGISVCGVPAVGASFNAKFIMWTFLACLLSRAVAVFGLCTLMNAF-------------SCCT---------------GMYKIGWRSQVVVWFAGLRGAVAFAAVSVFPDEEGNRDLMRTTTISVIVLFTFIVAPWTVPLLRALKIPMNVDYRTIVVPPRNKFYQWLADVDEKWVQPRLLR 968
F I GS +G GV A K ++R TR++EL+LY +VY P+ +A+ + +SGIV IL G+T + YA N+S + AD IFR LA L E A FL LG+SV G F +W LACL+ RA V+ L N+ SC T G+Y + + ++WF+GLRGAVA+A FPD GNR + T+++++ F++ T L+ L I +VD + + + + K++ P +LR
Sbjct: 236 FAFIFCGSLALGVASGVVCAALFKVTDLRHTRLVELSLYVLVVYFPFFIAEALELSGIVTILFTGITVQRYAVYNISPSTAAE-ADVIFRLLAHLAETAIFLNLGLSV--FEGDGDDLKTVFTLWAVLACLIGRAANVYPLTFFYNSCVKRLNSSKDIATRSCRTDAESAVTIKHSLDNTGIYIVKRNTADMLWFSGLRGAVAYACAETFPDANGNRKAFISITMAIVLSSVFLLGSTTSFALQRLGIQTDVDEEQYMQENKETSFSHFQRFENKYILPLILR 515
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Match: A0A2D4BSJ9_PYTIN (Sodium/hydrogen exchanger n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSJ9_PYTIN) HSP 1 Score: 133 bits (334), Expect = 1.450e-28 Identity = 90/255 (35.29%), Postives = 143/255 (56.08%), Query Frame = 3
Query: 204 FCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMLAQVMGMSGIVAILIAGVTSRHYAYNNLSSDDNRDLADFIFRFLAFLTENATFLYLGISVCGVPAVGASFNAKFIMWTFLACLLSRAVAVFGLCTLMNAFSCCTGMYKIGWRSQVVVWFAGLRGAVAFAAVSVFPDEEGNRDLMRTTTISVIVLFTFIVAPWTVPLLRALKIPMNVDYRTIVVPPRNKFYQW--LADVDEKWVQPRL 962
F ++ GST+IG G+ AL K +N+ + E+ +Y YLP++ AQ++ MSG+VAI+ AG++ +HYA NL+ + +D+ +F +A++TE A FL LG++V A+ + FI+WT + CL+ RA V+ L TL+N + + Q ++WF+GLRGAVAFA FP E+ N + TT+ +I+ FI+ TV +LR L IP + + K ++ L D K++ P L
Sbjct: 390 FILVFTGSTLIGVAFGMIPALIFKYSNLHTCLLHEVGVYVMFAYLPFLAAQILEMSGVVAIIFAGISMKHYASPNLTPEA-QDVCARVFNTVAYITETAVFLNLGLTVF---ALRTGYTFSFIIWTAMFCLIGRACHVYPLTTLVNLGRKSNPITR---NQQHMIWFSGLRGAVAFALAKSFPGEKQNEII--ATTMIIILASIFIMGGGTVAMLRILDIPRLTPEEEMALDKTVKPHKHMRLLQFDNKYLIPLL 635
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Match: A0A024UUA8_9STRA (Sodium/hydrogen exchanger n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UUA8_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.780e-28 Identity = 84/225 (37.33%), Postives = 132/225 (58.67%), Query Frame = 3
Query: 189 IGIMVFCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMLAQVMGMSGIVAILIAGVTSRHYAYNNLSSDDNRDLADFIFRFLAFLTENATFLYLGISVCGVPAVGASFNAKFIMWTFLACLLSRAVAVFGLCTLMNAFSCCTGMYKIGWRSQVVVWFAGLRGAVAFAAVSVFPDEEGNRDLMRTTTISVIVLFTFIVAPWTVPLLRALKI 863
I I+ F +I VGST+IG L GV AL K + + E+ +Y YLP+++A + +SG+VAIL GVT +HY NNLS D+ +++ +F +++++E FL LG++V A+ ++ KFI+W +ACL RA VF L L+N K+ QV++WF+G RGA+ FA +P+++ R + TT+ V++ F+ TVP+L+ LKI
Sbjct: 218 IAILDFILIFVGSTLIGILFGVLSALLFKHFDFKGCLYHEMGVYMMFAYLPFLIAAIFDLSGVVAILFTGVTMKHYTSNNLS-DEGKEMCGRMFNAISYVSETTIFLNLGLAVF---ALQVGYHVKFIVWALVACLAGRAAFVFPLSYLINFRR--DEERKVPKNQQVMIWFSGFRGALCFALALEWPNDK--RSQVIATTMVVVLATLFVGGGLTVPMLKYLKI 434 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1612.2.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1612.2.4 >prot_P-wetherbeei_contig1612.2.4 ID=prot_P-wetherbeei_contig1612.2.4|Name=mRNA_P-wetherbeei_contig1612.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=516bp MVFCIIIVGSTIIGYLCGVAMALALKKANMRQTRVLELALYSTLVYLPYMback to top mRNA from alignment at P-wetherbeei_contig1612:1161..6894- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1612.2.4 ID=mRNA_P-wetherbeei_contig1612.2.4|Name=mRNA_P-wetherbeei_contig1612.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5734bp|location=Sequence derived from alignment at P-wetherbeei_contig1612:1161..6894- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1612:1161..6894- >mRNA_P-wetherbeei_contig1612.2.4 ID=mRNA_P-wetherbeei_contig1612.2.4|Name=mRNA_P-wetherbeei_contig1612.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1548bp|location=Sequence derived from alignment at P-wetherbeei_contig1612:1161..6894- (Phaeothamnion wetherbeei SAG_119_79)back to top |