mRNA_P-wetherbeei_contig16116.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16116.1.1
Unique NamemRNA_P-wetherbeei_contig16116.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16116.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16116contigP-wetherbeei_contig16116:93..290 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1051613.XP_003003971.1
Preferred nameORC1
PFAMsAAA,BAH
Model size198
Max annot lvl4751|Fungi
KEGG koko:K02603
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
KEGG ModuleM00284
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000076,GO:0000166,GO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0000808,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005657,GO:0005664,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006267,GO:0006270,GO:0006325,GO:0006342,GO:0006355,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007093,GO:0007346,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010389,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010629,GO:0010948,GO:0010972,GO:0016043,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0030466,GO:0030554,GO:0031261,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031570,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033260,GO:0033314,GO:0034622,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036387,GO:0036388,GO:0040029,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044774,GO:0044786,GO:0044818,GO:0045786,GO:0045814,GO:0045892,GO:0045930,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051726,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902299,GO:1902679,GO:1902749,GO:1902750,GO:1902969,GO:1903047,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141
Exons1
Evalue2.18e-05
EggNOG OGsCOG1474@1|root,KOG1514@2759|Eukaryota,39C03@33154|Opisthokonta,3NU0T@4751|Fungi,3QM19@4890|Ascomycota,211ZF@147550|Sordariomycetes,1EVF6@1028384|Glomerellales
DescriptionOrigin recognition complex subunit
Cds size198
COG categoryL
BRITEko00000,ko00001,ko00002,ko03032,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186077.5369434-CDS-P-wetherbeei_contig16116:92..2901683186077.5369434-CDS-P-wetherbeei_contig16116:92..290Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16116 93..290 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16116.1.1prot_P-wetherbeei_contig16116.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16116 93..290 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16116.1.1

>prot_P-wetherbeei_contig16116.1.1 ID=prot_P-wetherbeei_contig16116.1.1|Name=mRNA_P-wetherbeei_contig16116.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp
PEAITFGVYSHQQLLSILAARVGDIAEAKVLEWCCRRLENNTGDARTALA
VCAEAIAMARAERRPA
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mRNA from alignment at P-wetherbeei_contig16116:93..290+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16116.1.1 ID=mRNA_P-wetherbeei_contig16116.1.1|Name=mRNA_P-wetherbeei_contig16116.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig16116:93..290+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGAGGCGATAACATTCGGCGTCTACTCGCACCAGCAGCTTCTGAGCAT
CCTGGCCGCTCGCGTCGGTGACATCGCCGAAGCCAAGGTCCTCGAGTGGT
GCTGCCGGCGCCTCGAAAACAACACTGGCGACGCGCGGACTGCCCTCGCC
GTCTGCGCAGAGGCCATCGCGATGGCGCGGGCCGAACGCCGCCCCGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16116:93..290+

>mRNA_P-wetherbeei_contig16116.1.1 ID=mRNA_P-wetherbeei_contig16116.1.1|Name=mRNA_P-wetherbeei_contig16116.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig16116:93..290+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGAGGCGATAACATTCGGCGTCTACTCGCACCAGCAGCTTCTGAGCAT
CCTGGCCGCTCGCGTCGGTGACATCGCCGAAGCCAAGGTCCTCGAGTGGT
GCTGCCGGCGCCTCGAAAACAACACTGGCGACGCGCGGACTGCCCTCGCC
GTCTGCGCAGAGGCCATCGCGATGGCGCGGGCCGAACGCCGCCCCGCC
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