mRNA_P-wetherbeei_contig161.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig161.6.1
Unique NamemRNA_P-wetherbeei_contig161.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Match: D7FIG9_ECTSI (Trimethylguanosine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG9_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.660e-20
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1 
Query: 1504 NIPMKYWAQRHRYFSRYDKGVEMDWEGWYSVTPEAIAAHVAARLPPSCRIVLDPFVGCGGNAVQFA 1701
            ++P KYW QR+RYFSR+D+GV MD EGWYSVTPEAIA H+A R+   C +V+DPFVGCGGNAVQFA
Sbjct:  196 HVPNKYWGQRYRYFSRFDEGVTMDEEGWYSVTPEAIARHIAERV--CCDVVVDPFVGCGGNAVQFA 259
[Close]
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Match: A0A6H5LQ95_9PHAE (Trimethylguanosine synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ95_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 3.450e-19
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 1 
Query: 1504 NIPMKYWAQRHRYFSRYDKGVEMDWEGWYSVTPEAIAAHVAARLPPSCRIVLDPFVGCGGNAVQFA 1701
            ++  KYW QR+RYFSR+D+GV MD EGWYSVTPEAIA H+A R+   C +V+DPFVGCGGNAVQFA
Sbjct:  453 HVSNKYWGQRYRYFSRFDEGVTMDEEGWYSVTPEAIARHIAERV--CCDVVVDPFVGCGGNAVQFA 516
[Close]
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Match: G3PPB1_GASAC (Trimethylguanosine synthase n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3PPB1_GASAC)

HSP 1 Score: 96.3 bits (238), Expect = 4.950e-19
Identity = 51/97 (52.58%), Postives = 69/97 (71.13%), Query Frame = 1 
Query: 1441 KSLRENRKSK-KRGRR---PGGKSANIPM-KYWAQRHRYFSRYDKGVEMDWEGWYSVTPEAIAAHVAARLP---PSCRIVLDPFVGCGGNAVQFACA 1707
            K++++ +K K KRGRR   P   +A   + KYWAQR+R FSRYD+G+ +D EGW+SVTPE IA H+A R+    P C++V+D F G GGNA+QFA A
Sbjct:   20 KNIKKPKKKKGKRGRRQPVPAEMAAEPELAKYWAQRYRLFSRYDEGIRLDREGWFSVTPERIAEHIALRVEHSFPDCQLVIDAFCGVGGNAIQFALA 116
[Close]
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Match: G3PPB3_GASAC (Trimethylguanosine synthase n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3PPB3_GASAC)

HSP 1 Score: 96.3 bits (238), Expect = 1.980e-18
Identity = 51/97 (52.58%), Postives = 69/97 (71.13%), Query Frame = 1 
Query: 1441 KSLRENRKSK-KRGRR---PGGKSANIPM-KYWAQRHRYFSRYDKGVEMDWEGWYSVTPEAIAAHVAARLP---PSCRIVLDPFVGCGGNAVQFACA 1707
            K++++ +K K KRGRR   P   +A   + KYWAQR+R FSRYD+G+ +D EGW+SVTPE IA H+A R+    P C++V+D F G GGNA+QFA A
Sbjct:   20 KNIKKPKKKKGKRGRRQPVPAEMAAEPELAKYWAQRYRLFSRYDEGIRLDREGWFSVTPERIAEHIALRVEHSFPDCQLVIDAFCGVGGNAIQFALA 116
[Close]
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Match: A0A7S2H475_9STRA (Trimethylguanosine synthase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H475_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.390e-17
Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 1 
Query: 1486 PGGKSANIPMKYWAQRHRYFSRYDKGVEMDWEGWYSVTPEAIAAHVAARLPPSCRIVLDPFVGCGGNAVQFA 1701
            P      IP KYWAQR R+FS +D+G+++D E WYSVTPE IA H++ R    C +V+D F G GGNA+QFA
Sbjct:    8 PNPSPHTIPEKYWAQRFRFFSEFDRGIQLDAESWYSVTPERIAEHISERC--RCGLVVDAFCGVGGNAIQFA 77
[Close]
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Match: A0A197JEL5_9FUNG (Trimethylguanosine synthase (Fragment) n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JEL5_9FUNG)

HSP 1 Score: 90.1 bits (222), Expect = 3.910e-17
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 1 
Query: 1516 KYWAQRHRYFSRYDKGVEMDWEGWYSVTPEAIAAHVAARLPPSCRIVLDPFVGCGGNAVQFA 1701
            KYWAQR+RYFS YD+G++MD EGWYSVTPE IAAH+A R      +++D F G GGN +QFA
Sbjct:    3 KYWAQRYRYFSLYDQGIQMDQEGWYSVTPEKIAAHIAERCASD--VIIDAFCGVGGNTIQFA 62
[Close]
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Match: A0A0S7LDP3_9TELE (Trimethylguanosine synthase (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LDP3_9TELE)

HSP 1 Score: 92.8 bits (229), Expect = 7.840e-17
Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 1 
Query: 1438 IKSLRENRKSKKRGRRPGGKSANIPM-KYWAQRHRYFSRYDKGVEMDWEGWYSVTPEAIAAHVAARLPPS---CRIVLDPFVGCGGNAVQFA 1701
            +K   +NRK +K+ + P    A+  + KYWAQR+R FSRYD+G+ +D EGW+SVTPE IA H+A R+  S    ++V+D F G GGNA+QFA
Sbjct:   72 VKKPNKNRKRRKKPKVPAEMEADPELAKYWAQRYRLFSRYDEGIRLDREGWFSVTPEKIAEHIALRVEQSFADSQVVIDAFCGVGGNAIQFA 163
[Close]
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Match: A0A1X2HMJ9_SYNRA (Trimethylguanosine synthase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HMJ9_SYNRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.310e-16
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 1 
Query: 1504 NIPM---KYWAQRHRYFSRYDKGVEMDWEGWYSVTPEAIAAHVAARLPPSCRIVLDPFVGCGGNAVQFA 1701
            NIP    KYW QR+RYFS +D+G+ MD EGW+SVTPE IA H+A+R      IV+D F GCGGNA+QFA
Sbjct:   42 NIPQELQKYWFQRYRYFSLFDQGIRMDHEGWFSVTPERIAEHIASRCQSD--IVIDAFCGCGGNAIQFA 108
[Close]
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Match: A0A433DLE7_9FUNG (Trimethylguanosine synthase n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DLE7_9FUNG)

HSP 1 Score: 93.2 bits (230), Expect = 1.860e-16
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 1 
Query: 1504 NIP---MKYWAQRHRYFSRYDKGVEMDWEGWYSVTPEAIAAHVAARLPPSCRIVLDPFVGCGGNAVQFA 1701
            NIP    KYW QR+RYFS +D GV +D EGWYS+TPE IAAH+A R    C +++D F GCGGNA+QFA
Sbjct:   90 NIPEDLYKYWGQRYRYFSLFDYGVYLDREGWYSITPEKIAAHIAKRC--RCGVIIDAFTGCGGNAIQFA 156
[Close]
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Match: A7SAF9_NEMVE (Trimethylguanosine synthase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SAF9_NEMVE)

HSP 1 Score: 89.4 bits (220), Expect = 2.010e-16
Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 1 
Query: 1516 KYWAQRHRYFSRYDKGVEMDWEGWYSVTPEAIAAHVAARLPPSCRIVLDPFVGCGGNAVQFA 1701
            KYWAQR+R FSR+D+G++MD EGWYSVTPE IA H+A R    C +++D F G GGNA+QFA
Sbjct:   12 KYWAQRYRLFSRFDEGIKMDKEGWYSVTPERIAEHIAERC--RCDLIVDAFCGVGGNAIQFA 71
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig161.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIG9_ECTSI1.660e-2071.21Trimethylguanosine synthase n=1 Tax=Ectocarpus sil... [more]
A0A6H5LQ95_9PHAE3.450e-1969.70Trimethylguanosine synthase n=1 Tax=Ectocarpus sp.... [more]
G3PPB1_GASAC4.950e-1952.58Trimethylguanosine synthase n=1 Tax=Gasterosteus a... [more]
G3PPB3_GASAC1.980e-1852.58Trimethylguanosine synthase n=1 Tax=Gasterosteus a... [more]
A0A7S2H475_9STRA1.390e-1754.17Trimethylguanosine synthase (Fragment) n=1 Tax=Dic... [more]
A0A197JEL5_9FUNG3.910e-1762.90Trimethylguanosine synthase (Fragment) n=1 Tax=Lin... [more]
A0A0S7LDP3_9TELE7.840e-1750.00Trimethylguanosine synthase (Fragment) n=1 Tax=Poe... [more]
A0A1X2HMJ9_SYNRA1.310e-1660.87Trimethylguanosine synthase n=1 Tax=Syncephalastru... [more]
A0A433DLE7_9FUNG1.860e-1660.87Trimethylguanosine synthase n=2 Tax=Jimgerdemannia... [more]
A7SAF9_NEMVE2.010e-1662.90Trimethylguanosine synthase n=1 Tax=Nematostella v... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig161contigP-wetherbeei_contig161:9896..13017 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIG9
Preferred nameTGS1
PFAMsMethyltransf_15,WW
Model size2579
Max annot lvl2759|Eukaryota
KEGG koko:K03125,ko:K10408,ko:K14292
KEGG Pathwayko03013,ko03022,ko05016,map03013,map03022,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008380,GO:0009451,GO:0009452,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0016740,GO:0016741,GO:0019216,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031974,GO:0031981,GO:0032259,GO:0032991,GO:0034622,GO:0034641,GO:0036260,GO:0036261,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050789,GO:0065003,GO:0065007,GO:0070013,GO:0071164,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0120114,GO:0140098,GO:1901360,GO:1990904
Exons3
Evalue2.54e-21
EggNOG OGsKOG2730@1|root,KOG2730@2759|Eukaryota
DescriptionRNA trimethylguanosine synthase activity
Cds size2484
COG categoryK
BRITEko00000,ko00001,ko01000,ko01001,ko03021,ko03036,ko04812
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186076.9001217-UTR-P-wetherbeei_contig161:9895..99731683186076.9001217-UTR-P-wetherbeei_contig161:9895..9973Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig161 9896..9973 +
1683186076.9089968-UTR-P-wetherbeei_contig161:10226..102351683186076.9089968-UTR-P-wetherbeei_contig161:10226..10235Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig161 10227..10235 +
1683186076.9317398-UTR-P-wetherbeei_contig161:13009..130171683186076.9317398-UTR-P-wetherbeei_contig161:13009..13017Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig161 13010..13017 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186076.9163513-CDS-P-wetherbeei_contig161:10235..116981683186076.9163513-CDS-P-wetherbeei_contig161:10235..11698Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig161 10236..11698 +
1683186076.92443-CDS-P-wetherbeei_contig161:11988..130091683186076.92443-CDS-P-wetherbeei_contig161:11988..13009Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig161 11989..13009 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig161.6.1prot_P-wetherbeei_contig161.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig161 10236..13009 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig161.6.1

>prot_P-wetherbeei_contig161.6.1 ID=prot_P-wetherbeei_contig161.6.1|Name=mRNA_P-wetherbeei_contig161.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=828bp
MEDPLRKARGKVADATPMLRCTRVELHDSFQGLRGAGAVGRAERTTATRS
GDGSSGGGNADDVEELQARLALGLPAGFCGGERNSVAAAPAGQKRRRWQT
EAAAGAAAVSGTEVNGGYLGSDSRGSGPVVVGTVMECRFAGDGRWYPARI
DEAPANPEMQATSADSGADDGDAANSMDVGDASPGDDGGYKSNGAEGSRF
FSETATVTFLGFGNTERVPMTWLRPLQSAGTLRWCREHLGSLDGVVADTA
AETELAAKTEAVTTAAATTTDTMDAGEEDANEEAVRRAAAWAAAAVAGLP
PPKHVRFAGNDNEQCGEGHKEGGAAAAAITDDSLTGENSGGGASHAVALT
GAGGSGGSAAGDYGSGDGSGFSAMDVVGLRPGSIAMRIVQLMADHPRDGT
ANDSGAGAASAARLQSALRVVAADLGGSQTRNDRDCGRIQSQCRETSSEK
IKSLRENRKSKKRGRRPGGKSANIPMKYWAQRHRYFSRYDKGVEMDWEGW
YSVTPEAIAAHVAARLPPSCRIVLDPFVGCGGNAVQFACAIWARGEQLKN
DGRTRGDTDAITIGSGCDRKEKGADRENGGGIASAGNAGSGGGGGGGYGD
GGMGGNAGGCLGNGQGVAEDGTAACDGGGIAASNDGSYDVKTTNSGGENG
CVREVGLDRDGDRATAIGCRRAGRNGRIDGSAGRERNNGGSGGGSCGTST
YSPFGGLVIAADIDAGRLEMARKNAVVYGVEHLIEFVLCDAMALMGSMSS
PPSSAAAAAATQATQQGSGRRCSEGGADTVFLSPPWGGPGAFGIPFPPTL
RCLLGSYPLVSFLYEGGTGLRIEQAAR*
back to top

mRNA from alignment at P-wetherbeei_contig161:9896..13017+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig161.6.1 ID=mRNA_P-wetherbeei_contig161.6.1|Name=mRNA_P-wetherbeei_contig161.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3122bp|location=Sequence derived from alignment at P-wetherbeei_contig161:9896..13017+ (Phaeothamnion wetherbeei SAG_119_79)
TTTTAGAAAGCAGACAGCAAAGCTTACTTTGCTGCTCTATCGATCTTCCT
GATGCCTTATTGAGAAACAGCTGCAAAGGTAAGCCAAGAACTGTGCTCGG
AAAAGGAGAAAGTTTATGGTGATCGCGCTCGATCCTTTCTAGTTATGATT
TGCTGCAGCGAGAAGTTTCACGCGTAGATCGCACTTCTTCTCCACGCTGA
GCAGGCGGGTCTCACAATTCTCCGTTTTGGAGAGGCGGAAAGAAGAAAGC
GCACAGAGATATCCACGTGGAAGTCGGCGATACTTTCCTTTCACCCAGTA
TACGTTTCCCAAAACACTCTCTTTCCTCTAGGAAGAGAAGATGGAGGATC
CACTAAGAAAAGCTCGCGGAAAAGTTGCAGACGCAACGCCCATGCTACGC
TGCACTCGCGTCGAGCTACACGACAGCTTTCAAGGGTTGCGCGGTGCTGG
GGCGGTAGGCAGAGCAGAAAGGACGACCGCTACGCGCTCCGGCGACGGCA
GCAGCGGTGGCGGCAACGCCGACGATGTGGAGGAGCTGCAGGCACGTCTG
GCACTCGGCCTGCCGGCGGGCTTTTGCGGCGGCGAGCGCAACAGTGTAGC
GGCGGCACCAGCCGGGCAGAAGCGCCGGCGGTGGCAGACGGAGGCTGCCG
CCGGCGCCGCCGCCGTGTCAGGCACCGAAGTTAATGGCGGTTATCTCGGC
AGTGACAGCAGGGGCAGCGGACCCGTGGTCGTAGGGACCGTGATGGAATG
TCGCTTTGCCGGCGACGGTCGGTGGTACCCGGCGCGCATCGACGAGGCGC
CTGCCAATCCAGAAATGCAGGCCACATCAGCCGACAGTGGCGCCGATGAC
GGCGATGCCGCCAATTCGATGGACGTCGGCGATGCCAGCCCCGGCGATGA
CGGCGGTTACAAAAGCAATGGCGCCGAAGGCAGCAGATTCTTCTCGGAGA
CGGCGACGGTAACCTTTCTTGGTTTCGGCAACACAGAGAGGGTACCAATG
ACGTGGCTCCGACCACTGCAGTCTGCGGGAACGCTGCGGTGGTGCCGGGA
GCACCTCGGCTCTCTCGACGGCGTTGTGGCTGACACGGCTGCCGAGACCG
AGCTGGCGGCCAAGACCGAAGCGGTGACGACGGCGGCGGCGACGACAACG
GATACGATGGATGCAGGAGAGGAAGATGCGAACGAAGAGGCGGTCCGCCG
GGCCGCGGCATGGGCAGCTGCGGCGGTCGCGGGGCTGCCGCCGCCGAAGC
ACGTGAGGTTCGCTGGCAACGACAACGAGCAGTGCGGCGAAGGTCACAAG
GAGGGAGGTGCAGCTGCTGCTGCCATAACAGATGATAGTCTGACTGGCGA
GAACAGCGGCGGAGGTGCGAGCCATGCTGTCGCTTTGACCGGCGCTGGTG
GCAGTGGCGGCAGCGCTGCTGGCGACTATGGCAGCGGCGACGGTAGCGGC
TTCAGCGCGATGGACGTTGTTGGGCTCCGGCCGGGGTCAATTGCGATGCG
TATCGTCCAGTTGATGGCCGATCACCCCCGAGACGGCACCGCAAACGACT
CCGGGGCGGGTGCGGCGTCGGCCGCACGGCTGCAGTCAGCGCTTCGAGTC
GTCGCGGCAGACTTGGGCGGCAGCCAGACTCGCAATGACCGTGACTGCGG
CCGCATTCAGTCGCAATGTCGCGAGACGTCTTCGGAGAAAATAAAGAGCT
TGAGAGAAAATCGAAAATCAAAGAAGCGTGGGCGGCGGCCAGGAGGAAAG
TCTGCTAACATCCCGATGAAGTACTGGGCGCAGCGACATCGATACTTTTC
CAGGTGAGCTTCCTTGGAGATATTCTTCCACTGAATCAGTGCTGGAATCA
ATGTTGCGGCGGCTCTTTATTTTATGCCGCTGCTCGATAACGTTGCATGG
AGATCGTCCGTCTGCGATATTTCGTTGTGTACTTCCCCCCGATGCTCCAA
ATCGGCTCGTTCCATCACACTCCCTTGCGCGCATGCTGCTGCCAACTTTG
CTGACGCGCCTCATGATGGCGCCGTCCCGCGCTGGCGCACCCAACGGGCG
GCGCCATCGTTATGCCCTGCGGCACCACCGGCGGTTTCGGCAGGTATGAC
AAGGGGGTGGAGATGGACTGGGAGGGCTGGTACTCCGTCACGCCCGAGGC
CATCGCCGCCCACGTCGCGGCGCGGCTGCCACCCTCCTGCCGGATCGTTC
TGGACCCGTTCGTCGGCTGCGGCGGGAATGCCGTGCAGTTCGCCTGCGCC
ATCTGGGCCCGTGGGGAACAGCTCAAGAACGATGGCAGAACGCGCGGCGA
CACTGACGCCATTACGATTGGCAGCGGATGTGACAGGAAAGAGAAAGGCG
CCGATAGAGAAAATGGCGGTGGCATCGCCAGCGCTGGCAACGCTGGGAGC
GGCGGTGGCGGCGGCGGCGGCTATGGTGATGGCGGTATGGGCGGGAATGC
CGGCGGCTGCCTCGGCAATGGCCAGGGGGTTGCTGAGGACGGTACAGCGG
CATGCGATGGTGGTGGCATTGCTGCCAGCAACGATGGCAGCTATGACGTC
AAGACAACAAACAGCGGCGGGGAGAATGGCTGTGTTCGCGAAGTTGGCCT
TGACAGGGATGGCGACCGGGCCACCGCCATTGGTTGCAGGCGAGCCGGAA
GGAATGGACGCATCGACGGAAGCGCGGGAAGAGAGAGAAATAACGGCGGT
AGCGGCGGCGGCAGTTGCGGCACCAGCACCTACAGTCCCTTTGGAGGGCT
CGTGATCGCCGCAGACATCGACGCCGGCCGGCTGGAGATGGCGCGGAAGA
ACGCGGTGGTCTACGGTGTGGAGCACCTCATCGAGTTCGTGCTCTGCGAC
GCGATGGCACTCATGGGGTCCATGTCGTCGCCGCCGTCGTCAGCGGCTGC
GGCAGCGGCGACGCAGGCGACGCAACAGGGAAGTGGCCGCCGCTGCAGCG
AAGGCGGCGCCGACACGGTGTTTCTGTCGCCGCCATGGGGCGGTCCCGGT
GCGTTTGGCATCCCTTTTCCTCCAACCTTGAGGTGCTTATTGGGATCCTA
CCCATTGGTTTCTTTTCTCTATGAAGGAGGAACCGGTCTAAGGATAGAGC
AAGCCGCTCGATGAATCCCCTT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig161:9896..13017+

>mRNA_P-wetherbeei_contig161.6.1 ID=mRNA_P-wetherbeei_contig161.6.1|Name=mRNA_P-wetherbeei_contig161.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2484bp|location=Sequence derived from alignment at P-wetherbeei_contig161:9896..13017+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGATCCACTAAGAAAAGCTCGCGGAAAAGTTGCAGACGCAACGCC
CATGCTACGCTGCACTCGCGTCGAGCTACACGACAGCTTTCAAGGGTTGC
GCGGTGCTGGGGCGGTAGGCAGAGCAGAAAGGACGACCGCTACGCGCTCC
GGCGACGGCAGCAGCGGTGGCGGCAACGCCGACGATGTGGAGGAGCTGCA
GGCACGTCTGGCACTCGGCCTGCCGGCGGGCTTTTGCGGCGGCGAGCGCA
ACAGTGTAGCGGCGGCACCAGCCGGGCAGAAGCGCCGGCGGTGGCAGACG
GAGGCTGCCGCCGGCGCCGCCGCCGTGTCAGGCACCGAAGTTAATGGCGG
TTATCTCGGCAGTGACAGCAGGGGCAGCGGACCCGTGGTCGTAGGGACCG
TGATGGAATGTCGCTTTGCCGGCGACGGTCGGTGGTACCCGGCGCGCATC
GACGAGGCGCCTGCCAATCCAGAAATGCAGGCCACATCAGCCGACAGTGG
CGCCGATGACGGCGATGCCGCCAATTCGATGGACGTCGGCGATGCCAGCC
CCGGCGATGACGGCGGTTACAAAAGCAATGGCGCCGAAGGCAGCAGATTC
TTCTCGGAGACGGCGACGGTAACCTTTCTTGGTTTCGGCAACACAGAGAG
GGTACCAATGACGTGGCTCCGACCACTGCAGTCTGCGGGAACGCTGCGGT
GGTGCCGGGAGCACCTCGGCTCTCTCGACGGCGTTGTGGCTGACACGGCT
GCCGAGACCGAGCTGGCGGCCAAGACCGAAGCGGTGACGACGGCGGCGGC
GACGACAACGGATACGATGGATGCAGGAGAGGAAGATGCGAACGAAGAGG
CGGTCCGCCGGGCCGCGGCATGGGCAGCTGCGGCGGTCGCGGGGCTGCCG
CCGCCGAAGCACGTGAGGTTCGCTGGCAACGACAACGAGCAGTGCGGCGA
AGGTCACAAGGAGGGAGGTGCAGCTGCTGCTGCCATAACAGATGATAGTC
TGACTGGCGAGAACAGCGGCGGAGGTGCGAGCCATGCTGTCGCTTTGACC
GGCGCTGGTGGCAGTGGCGGCAGCGCTGCTGGCGACTATGGCAGCGGCGA
CGGTAGCGGCTTCAGCGCGATGGACGTTGTTGGGCTCCGGCCGGGGTCAA
TTGCGATGCGTATCGTCCAGTTGATGGCCGATCACCCCCGAGACGGCACC
GCAAACGACTCCGGGGCGGGTGCGGCGTCGGCCGCACGGCTGCAGTCAGC
GCTTCGAGTCGTCGCGGCAGACTTGGGCGGCAGCCAGACTCGCAATGACC
GTGACTGCGGCCGCATTCAGTCGCAATGTCGCGAGACGTCTTCGGAGAAA
ATAAAGAGCTTGAGAGAAAATCGAAAATCAAAGAAGCGTGGGCGGCGGCC
AGGAGGAAAGTCTGCTAACATCCCGATGAAGTACTGGGCGCAGCGACATC
GATACTTTTCCAGGTATGACAAGGGGGTGGAGATGGACTGGGAGGGCTGG
TACTCCGTCACGCCCGAGGCCATCGCCGCCCACGTCGCGGCGCGGCTGCC
ACCCTCCTGCCGGATCGTTCTGGACCCGTTCGTCGGCTGCGGCGGGAATG
CCGTGCAGTTCGCCTGCGCCATCTGGGCCCGTGGGGAACAGCTCAAGAAC
GATGGCAGAACGCGCGGCGACACTGACGCCATTACGATTGGCAGCGGATG
TGACAGGAAAGAGAAAGGCGCCGATAGAGAAAATGGCGGTGGCATCGCCA
GCGCTGGCAACGCTGGGAGCGGCGGTGGCGGCGGCGGCGGCTATGGTGAT
GGCGGTATGGGCGGGAATGCCGGCGGCTGCCTCGGCAATGGCCAGGGGGT
TGCTGAGGACGGTACAGCGGCATGCGATGGTGGTGGCATTGCTGCCAGCA
ACGATGGCAGCTATGACGTCAAGACAACAAACAGCGGCGGGGAGAATGGC
TGTGTTCGCGAAGTTGGCCTTGACAGGGATGGCGACCGGGCCACCGCCAT
TGGTTGCAGGCGAGCCGGAAGGAATGGACGCATCGACGGAAGCGCGGGAA
GAGAGAGAAATAACGGCGGTAGCGGCGGCGGCAGTTGCGGCACCAGCACC
TACAGTCCCTTTGGAGGGCTCGTGATCGCCGCAGACATCGACGCCGGCCG
GCTGGAGATGGCGCGGAAGAACGCGGTGGTCTACGGTGTGGAGCACCTCA
TCGAGTTCGTGCTCTGCGACGCGATGGCACTCATGGGGTCCATGTCGTCG
CCGCCGTCGTCAGCGGCTGCGGCAGCGGCGACGCAGGCGACGCAACAGGG
AAGTGGCCGCCGCTGCAGCGAAGGCGGCGCCGACACGGTGTTTCTGTCGC
CGCCATGGGGCGGTCCCGGTGCGTTTGGCATCCCTTTTCCTCCAACCTTG
AGGTGCTTATTGGGATCCTACCCATTGGTTTCTTTTCTCTATGAAGGAGG
AACCGGTCTAAGGATAGAGCAAGCCGCTCGATGA
back to top