mRNA_P-wetherbeei_contig161.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig161.5.1
Unique NamemRNA_P-wetherbeei_contig161.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: D8LIV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV5_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 4.550e-54
Identity = 107/228 (46.93%), Postives = 150/228 (65.79%), Query Frame = 1
Query: 1141 RQSQPAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSV--LSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVMQRSYGQRLFKSDMV-SFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWGAGGGSAFL 1815
            ++ +P  K  +T  DL + +HF+L N ++K+LM+AIPK   +QVH LFLRL GS +WN+  +++IH+H+D+  +K S++  + P+RA+ I NDP+WT+ V  RDP  RLLS FLDK V +RSY   +FK++ V SFE  V L    A  +    +P   LGL +R+NPHWR Q  FF L     LPYF+FVG  +H + H  + L+ AGLWE+FGASGWG  G +AF 
Sbjct:  695 QEVKPKQKAVVTQEDLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWNTQRMEEIHYHKDMDKYKLSTMPNMPPERASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQKDYPGGNLGLTRRSNPHWRPQL-FFGLDK--FLPYFDFVGDFKHVQEHSEEFLKRAGLWEKFGASGWGRWGQAAFF 919          
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: F0Y5E9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E9_AURAN)

HSP 1 Score: 128 bits (322), Expect = 8.900e-29
Identity = 81/217 (37.33%), Postives = 115/217 (53.00%), Query Frame = 1
Query: 1153 PAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVMQR-----SYGQRLFKSDMVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGW 1788
            P A ++   ++L+  +H   V+ ++KLL  A+PK   ++  +LF RL G  + N       HF +D   F  + +++   AT + NDP+WT+   +RDPA RLLSA+LDKF   +     SY  R+FK   ++F   V  + A   R  G     K  GL   TNPHWR Q   F       LP +NFVG  +H   H  +LL A GLWE +GA+GW
Sbjct:   25 PRAPLSYREQELRYAQHHMYVDVKHKLLYCAVPKVACTEFMRLFFRLKGE-NQNQRWKGDPHFRQDKPLF--NKIMNVTTATALMNDPTWTKFAFWRDPAERLLSAYLDKFANGKRYSTGSYAVRIFKDKHMNFSGFVDRI-ASKNRVRG-----KPDGLHPNTNPHWRPQR--FMCNMEKFLPAYNFVGSFDHLGDHAEKLLRALGLWEAYGAAGW 230          
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A7S2WJM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJM7_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.510e-25
Identity = 92/284 (32.39%), Postives = 131/284 (46.13%), Query Frame = 1
Query:  976 LLPPGDPCVGAEKL-----RFLSAAATEEMSRLLELACSRDWRATGAPAALPXXXXXLAVRQSQPAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVM----QRSYGQRLFKSD-MVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWGAG 1797
            LL P DP    + L      FL    T++        C+   R TG   AL       +  Q +P   I L S D + + H  +V+ ++++L+ AIPK  SS+  +LFLRL G P+W +    ++   R+++       L P RA EI  DPS+ + V FRDP +RLLS +LDKF         Y  ++F  + ++SF                 +F  K+   G   N HWR QA    +    L   ++F G  E    HG   L  AGLW+ FG SGWG G
Sbjct:   43 LLSPADPYAAIDGLGRRTSTFLLPVKTQDAELRPLCPCNGGDRGTGWRGALEQSRRSPSAEQ-RPLLPIELKSLDFRFLAHA-IVDLKHRVLICAIPKVASSEWKKLFLRLQGDPEWAAEPWWKM---RNLTSLYK---LGPARAMEILQDPSFIKGVFFRDPFSRLLSCYLDKFSAGTHRANKYSLKIFGDNHLLSFP----------------EFLKKVTAAGAPMNVHWRPQADICQIEE--LFHLYSFFGNFERLPEHGRAFLTQAGLWKEFGESGWGPG 300          
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A7S3JPI6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPI6_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.600e-25
Identity = 72/206 (34.95%), Postives = 109/206 (52.91%), Query Frame = 1
Query: 1183 DLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFV----MQRSYGQRLFKSDMVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGW 1788
            +L+   H   +++++KL+   IPK   ++  + F RL G        +   HF  D       S+LS   AT I NDP++T+ V FRDP  RL SA++DKF        SY  +L+++  ++F   V +L  + P + G++      GLG +TNPHWR Q     L     LP +NF+G   H   H  ++L+A GLWE++G SGW
Sbjct:   61 ELRYAAHHAFIDKRHKLVYCGIPKVACTEFFRFFFRLKGEHRDRGRWLGDPHFRSDRP---LLSMLSTDEATAIMNDPAYTKFVYFRDPVDRLRSAWMDKFHNWHRYTMSYKVKLYQNKNLTFSEFVDIL-LEKPSRNGNR------GLGPKTNPHWRPQRYLCNLEK--FLPLYNFIGSFSHLFEHNKRMLQALGLWEQYGQSGW 254          
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A835YWJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ0_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.000e-24
Identity = 89/301 (29.57%), Postives = 129/301 (42.86%), Query Frame = 1
Query: 1150 QPAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFRDPATRLLS----------------------------------------------------AFLDKFVMQRSYGQRLFKSDM--VSFEMLVALLHA-----------DAPRKY--------------------GSQFPPKILGLG--QRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWG 1791
            QPAA +T T  D+ A++HF+LVN+++KLL LAIPK   +Q+ QLFLR   + DW++  +  IHFH      +A + ++  + T I NDP WTRAV+ R+P  R+LS                                                    A+LDK+V+  SYG R+ ++D   VSF   V +                P +                     G +   +  G       +PH R QA F        LPY NF+      + H  ++LE  G+WE++GASGWG
Sbjct:  512 QPAAPVTATDADVVALQHFWLVNKRHKLLYLAIPKVACTQMIQLFLRAVNATDWDTDVMANIHFHSGNKRIRAKTQVTAAQLTAIMNDPQWTRAVVLREPRRRVLSLPCVRALFRPLRYPDKLVCGLLSPRRLPRVLTIVTNVRALWRLRDQLTQLPCAYLDKYVLHGSYGDRV-RADKRYVSFHEFVEVXXXXXXXXXXXXXESTPVRXXXXXXXXXXXXXXXXXQVDTGMRLARRRTGAHPLSTVDPHHRPQALFM----DKFLPYMNFIAEYTQVQHHVREMLEKVGMWEQYGASGWG 807          
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A7S3LEC1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEC1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.280e-24
Identity = 89/234 (38.03%), Postives = 117/234 (50.00%), Query Frame = 1
Query: 1210 LVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRD-ISHFKASSVLS------PQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVMQRSYGQRLFK-SDMVSFEML----VALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWGAGGGSAFLAPAAGSEHATAAEAREAMYY 1875
            +V E +KLL   IPK G +   QLF R++G   W          H D I H   S+ L+      P+ A  +  DPSWTRA+ FRDP  RLLSA+LDK + +     R+    +  S +ML    V L     P    + F  KI+   Q  +PHWR QA    LP+    PY NFVG M+H E    +LL+  G W+ FGA GW +G   A  + AA   HAT A  + + YY
Sbjct:  140 IVIESHKLLFFTIPKVGCTVFKQLFRRMYGYQSWKE--------HNDFIPHHPMSNGLNYLYHYKPREAERMLTDPSWTRAIFFRDPKERLLSAYLDKVLHENGKYVRVHCCGNNPSLKMLLHCQVLLDKLPNPLLTFADFLEKIVL--QCKDPHWRPQAH--RLPDL-YWPYINFVGHMDHIEQDTKRLLQKIGAWDEFGAHGWESG---AIFSGAASVAHATDARQKVSSYY 357          
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A7S4E7B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7B5_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.100e-22
Identity = 102/325 (31.38%), Postives = 138/325 (42.46%), Query Frame = 1
Query: 1141 RQSQPAAKIT----------LTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQ--------QIHFHRDISHFKA-----SSVLSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFV----MQRSYGQRLFKSDMVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWG--AGGGSAFLAPAAGSE----------HATAAEAREAMYYGAGGGGEWEGEGGAGKEGNVSALLADVRRLYAEDYTLLERL 1998
            RQ++  A+IT              +L    H   V+ ++KLL  AIPK   ++  +LF R+  S    +   Q        Q +  +   HF+      + V +P+ AT   ND ++T+ V FRDPA RLLSA+LDKF      +  YG R+FK   ++F   V  +     R+          GL   TNPHWR Q     L     LP + FVG   H   H   +L  A LWE FGA GW   A GGS  + PA G            HA    ++   YY                      LLA VR+ YA DY +LE +
Sbjct:   39 RQTRGQARITPRKPQLPHLQYRKHELDYASHHAYVDFEHKLLYCAIPKVACTEFFRLFHRMADSKKKCATVGQCATQMTERQRNRWKGDPHFRPDKPILNKVATPEEATHAMNDKNFTKFVFFRDPAERLLSAYLDKFEHGSRYRVGYGLRIFKDPKMNFSGFVERIERVNKRRSNPD------GLHPHTNPHWRPQRFMCNLEK--FLPLYTFVGSFTHLREHTELMLRQANLWEEFGARGWPLKAPGGSGKV-PARGPTGSMFQKNTAWHADGTSSKTEQYY-------------------TPELLARVRKAYAMDYEMLESI 335          
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A8J2SW07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW07_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.480e-20
Identity = 88/304 (28.95%), Postives = 135/304 (44.41%), Query Frame = 1
Query: 1153 PAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLS---PQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFV------MQRSYGQRLFKSDMVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWGAGGGSAFLAP-------------AAGSEHATAAEAREAMYYGAGGGGEWEGEGGAGKEGNVSALLADVRRLYAEDYTLLERL 1998
            P   I L  R+ +     F V+ ++K+   AIPK   ++  +L  RL G   W     +  HF  D     AS++L     + A  I ND +WT+    RDPATR LSA+LDKFV      +  +YG R F  ++   E +  L   +  R     + P+ L +G  +N HW+ Q    +L     L  + F+GR E    H   LL +  LW+ +G+ GWG       L P             A  ++H+T A+AR+A Y                      ++L+ +R +YA DY +L+ +
Sbjct:  125 PTDHIPLGPREPRFALRSFYVSRKHKIAFCAIPKVACTEFIRLMYRLEGDVHW----WKDPHFRTD-----ASTLLKRGDEREAEHILNDANWTKVAFLRDPATRALSAYLDKFVDSPSRGIHGNYGLRHFGRELNWTEFVDTLGSENTDR-----YKPEGLHVG--SNAHWKPQRFHCSLEK--FLTKYQFIGRYESLRDHAEMLLRSLNLWDAYGSKGWGHRDKRQRLMPKPSDSIPVRDSLFAQKAKHSTNADARKASYL-------------------TPSILSKLREIYAMDYEMLDAI 391          
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A1E7FXT2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXT2_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.030e-16
Identity = 63/189 (33.33%), Postives = 93/189 (49.21%), Query Frame = 1
Query: 1228 KLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVMQRSYG---QRLFKSDMVSFEMLVALLHADAPRKYGSQ---FPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFG 1776
            KL    IPK G +   Q    + G+ D+ S      H   D+ ++    +L+P     I+ DP WT A + R+PA RLLSA+LDK  + R  G   ++L  ++  +FE+ +  L  + P     Q    P  + GL   T+PHWR Q   F    +  +  F+F+G ++H E H   LLE  GLWE  G
Sbjct:  259 KLAFCGIPKVGITNWLQFIRFVMGAHDYASF----PHGKPDLRYWNFD-ILNPDIQRRIWEDPEWTFATILRNPADRLLSAYLDKLKVGRGSGAIAKQLKFTESFTFEVFLEYLEKEPPEDLNCQDKDLPAVLTGLSWCTDPHWRPQV--FGCGLSEKIDRFDFIGSLDHIEKHSQALLEKVGLWESHG 440          
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A7S2WKE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKE2_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 9.110e-16
Identity = 53/145 (36.55%), Postives = 68/145 (46.90%), Query Frame = 1
Query: 1378 LSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVM----QRSYGQRLFKSD-MVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWGAG 1797
            L P RA EI  DPS+ + V FRDP +RLLS +LDKF         Y  ++F  + ++SF                 +F  K+   G   N HWR QA    +    L   ++F G  E    HG   L  AGLW+ FG SGWG G
Sbjct:   10 LGPARAMEILQDPSFIKGVFFRDPFSRLLSCYLDKFSAGTHRANKYSLKIFGDNHLLSFP----------------EFLKKVTAAGAPMNVHWRPQADICQIEE--LFHLYSFFGNFERLPEHGRAFLTQAGLWKEFGESGWGPG 136          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIV5_ECTSI4.550e-5446.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0Y5E9_AURAN8.900e-2937.33Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2WJM7_9STRA1.510e-2532.39Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3JPI6_9STRA1.600e-2534.95Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A835YWJ0_9STRA2.000e-2429.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3LEC1_9STRA2.280e-2438.03Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S4E7B5_9STRA1.100e-2231.38Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2SW07_9STRA4.480e-2028.95Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1E7FXT2_9STRA1.030e-1633.33Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2WKE2_9STRA9.110e-1636.55Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig161contigP-wetherbeei_contig161:5802..9869 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIV5
PFAMsSulfotransfer_2
Model size2380
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons7
Evalue7.98e-56
EggNOG OGs2E1X5@1|root,2S96K@2759|Eukaryota
Ec32 ortholog descriptionSulfotransferase
Ec32 orthologEc-20_001700.1
DescriptionSulfotransferase family
Cds size1950
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig161.5.1prot_P-wetherbeei_contig161.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig161 6139..9776 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186077.0565302-UTR-P-wetherbeei_contig161:5801..61381683186077.0565302-UTR-P-wetherbeei_contig161:5801..6138Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig161 5802..6138 -
1683186077.1187804-UTR-P-wetherbeei_contig161:9776..98691683186077.1187804-UTR-P-wetherbeei_contig161:9776..9869Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig161 9777..9869 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186077.065346-CDS-P-wetherbeei_contig161:6138..65311683186077.065346-CDS-P-wetherbeei_contig161:6138..6531Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig161 6139..6531 -
1683186077.0733535-CDS-P-wetherbeei_contig161:6808..69281683186077.0733535-CDS-P-wetherbeei_contig161:6808..6928Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig161 6809..6928 -
1683186077.0811253-CDS-P-wetherbeei_contig161:7143..73411683186077.0811253-CDS-P-wetherbeei_contig161:7143..7341Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig161 7144..7341 -
1683186077.0889194-CDS-P-wetherbeei_contig161:7732..78411683186077.0889194-CDS-P-wetherbeei_contig161:7732..7841Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig161 7733..7841 -
1683186077.096371-CDS-P-wetherbeei_contig161:8228..83861683186077.096371-CDS-P-wetherbeei_contig161:8228..8386Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig161 8229..8386 -
1683186077.1037107-CDS-P-wetherbeei_contig161:8614..95081683186077.1037107-CDS-P-wetherbeei_contig161:8614..9508Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig161 8615..9508 -
1683186077.1114001-CDS-P-wetherbeei_contig161:9698..97761683186077.1114001-CDS-P-wetherbeei_contig161:9698..9776Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig161 9699..9776 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig161.5.1

>prot_P-wetherbeei_contig161.5.1 ID=prot_P-wetherbeei_contig161.5.1|Name=mRNA_P-wetherbeei_contig161.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=650bp
MQFLLLLSFLRLLVQAGARGGPCAYAVAIATLPDESDIAYAAFFAGAIRL
AEPACDVLALVASHLFPSLAAPLQAAGITPRAADLAVPLRAIGSQDLHRS
ILSGSGWDLLQLSALSLTKYERVIICGSLRVAVMAPLAVAATAGDLLPLS
SRDWTLAVAVPVGGSGPLLLGGLMVARPSVAAAESVARLLSMADVTPWLF
QNFKRGVGRGARARKAASVVAPVLRNAVAAARLQTASLPIGVCPRDPLAT
APPPSADSGSAAAAAAWCEGYLDHRGTGGGRVGGVREGGKPIVALLPPGD
PCVGAEKLRFLSAAATEEMSRLLELACSRDWRATGAPAALPPPPPPLAVR
QSQPAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRL
HGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFR
DPATRLLSAFLDKFVMQRSYGQRLFKSDMVSFEMLVALLHADAPRKYGSQ
FPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQL
LEAAGLWERFGASGWGAGGGSAFLAPAAGSEHATAAEAREAMYYGAGGGG
EWEGEGGAGKEGNVSALLADVRRLYAEDYTLLERLFGATATAASVPPTV*
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mRNA from alignment at P-wetherbeei_contig161:5802..9869-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig161.5.1 ID=mRNA_P-wetherbeei_contig161.5.1|Name=mRNA_P-wetherbeei_contig161.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4068bp|location=Sequence derived from alignment at P-wetherbeei_contig161:5802..9869- (Phaeothamnion wetherbeei SAG_119_79)
GAGTGAGAGAGCGCGCTGAGAGACAGACGTGTGCTCTGCGAACTGACTGC CCGCCACCGGCGAGGGCAACTTCCGTCCATAGTACCGGGGAAAATGCAGT TCCTTCTTCTCCTCAGCTTTCTACGACTTCTCGTGCAAGCCGGAGCTCGC GGTGGGCCCTGCGCCTACGCCGTAAGTCGAAGGACTGAGTCTAAAATGAA GGTTATTCGTGACACCTCTGATCTACCATCTTTTTCTTTCAAGTCTTGTC GGTCGCCATGGACAAATTCCAATTATCTCACATGACCGAGCCCGGCTTTT TCCCAGCCCACCTTTGTCACAATTGTCCTCCCCTTGTACATGCACTCCTG TCCGTTTTCAGGTGGCAATCGCGACCTTGCCTGACGAGAGCGACATCGCG TACGCCGCCTTCTTCGCAGGAGCAATACGGCTCGCCGAGCCCGCGTGCGA CGTCCTCGCCCTCGTCGCAAGCCACCTCTTTCCGTCCCTGGCGGCCCCGC TCCAGGCTGCCGGGATCACACCGCGCGCCGCCGACCTGGCCGTGCCGCTG CGGGCAATCGGCAGCCAGGACCTCCACCGTTCGATCCTCTCCGGCAGCGG CTGGGACCTCTTGCAGCTTTCGGCGCTATCCCTGACGAAGTATGAGCGCG TCATCATCTGCGGCAGCCTCCGTGTCGCCGTCATGGCGCCACTCGCCGTT GCTGCCACCGCCGGCGACCTTCTGCCGCTGTCCAGCCGCGACTGGACGCT GGCGGTCGCAGTCCCCGTCGGCGGCAGCGGCCCTCTGCTCCTGGGAGGCC TCATGGTGGCGCGCCCATCAGTGGCGGCGGCGGAATCCGTCGCCCGTTTG CTCTCCATGGCCGATGTCACTCCGTGGCTGTTTCAGAACTTTAAGCGTGG CGTCGGCAGGGGCGCCAGGGCCCGGAAGGCGGCCTCCGTCGTCGCTCCGG TCCTCCGGAACGCCGTCGCCGCCGCTCGGCTCCAGACCGCCAGCCTGCCC ATTGGTGTGTGCCCACGCGACCCGCTGGCGACGGCGCCACCGCCATCAGC CGACAGCGGCAGCGCGGCGGCCGCGGCTGCGTGGTGCGAGGGCTACTTAG ATCACAGAGGAACAGGCGGCGGGCGCGTGGGCGGCGTCCGGGAGGGCGGC AAGCCGATCGTGGCGCTGCTGCCGCCGGGCGACCCGTGCGTCGGGGCGGA AAAGCTGCGGTTCCTGTCGGCGGCCGCGACGGAAGAGATGTCTAGGCTGC TAGAGGTGAAGGGCGGTCTCTTCTTTTTCGTTGGTTTGATTTTGTCTCAA TTCATCTCGCATTAGCTGGAAAATGAATGCGTTGACTCGTTGGACCTTTT TGAGGTTCCCCTCTTCCTGCGCTCTTCCTGCGTTATGCAAGTTCTGGAGG CCTCAACGAAAGAGCACCCGCGCCTAGTTTCTCTTACACAGCGGCTGCCG CCTTGCATCCCCGTCGCACTTGATGTTGCACAGCTCGCCTGCTCGCGAGA TTGGAGAGCCACCGGCGCGCCCGCCGCTCTGCCGCCGCCTCCACCACCGC TGGCGGTGAGACAGTCGCAGCCGGCAGCCAAAATCACGCTGACTTCGAGA GATCTTAAGGCGATGGAGCACTTCTTCCTCGTCAACGAGCAGTGAGTCAA CGAGCAGTGAGTCATGCCAAAAAGGTTGGGGCTTCGTGCTCCCGCGCCGG ACTTGGGTTGTTAGCCCCTTTCCGTATCATTTTTCGCCGTTTTTGCTTTG TTGGTCCTCCCTTTTATTTGCCTCTCCCTCTCGTTGTCTTTTTGTCCTGA GCTGCTCTTAATATTCTTCGGTTTATAATGTGTTCTGTAGATTGGCTATT TTGCGTCCCAAGTTCTTTTCCTCCTTGGACCTCAGGATGCGACTTGAATA CGTGCATGCTTCATCATGAGAAATGAGAGTGTTCCTCCTCTCGTCCTCAT CTTGCTCATGGACCTCTTTTCCGCCTTCCGCATGCCCGTCGGATGAACGG ACAAACGAATGAATGGATCTGCCAGCAGGTACAAACTGCTGATGCTGGCG ATCCCCAAGGCGGGCAGCTCGCAGGTCCACCAGCTCTTCCTGCGGCTGCA CGGCTCTCCCGACTGGAACAGCGGCCACATCCAGCAGGCAAGTGGTCGGC GGGGTTTTCTGGCGGAAGGCTTTCTCGCGGAAGATTTCCTTTTGAGCAGT GCCGATTAAGCAGTCAAAGAAAGAGATGGGCATCCTGCCGCCCAGCCTTT ATAGTTCCAAACAGGGAGATTTCCACATTGGGCTGCAAACTGTGGCTGGT TGCACTCCTTTCCTGCGTCATCCGCTGCTTTCGTGCTTCGTCTGCCGCTT TACCGTTCCGTCGACTGTTCGCCGTTTTGTCCTGCCTATCCCGTCCTGAC TGCCGCTTCCCTCCCCATTCCGTTCGCTGCTTCCCCGCTCGCCCGGCCCG CCGCTGCCCGGCTTTCGCCCTTGCGCTGTTGCCAATGTCGCCGCTGCCGC CGCTGCGACCGCCACCGTGTGCCCGCAGATTCACTTCCACCGCGACATTT CGCATTTCAAGGCCTCCTCTGTGCTGTCGCCACAGCGGGCAACCGAAATC TTCAACGACCCCAGCTGGACGCGCGCCGTGCTCTTTCGGGACCCGGCGAC GCGGCTCCTGTCCGCCTTTTTGGACAAGTTTGTGATGCAGCGCAGTTACG GCCAGCGTCTCTTCAAGAGCGATATGGTGAGGGCGCTTCTTTCAGTTGGG TTTCGTTTGCATTGGTTTTGGTCTCAAAAAGTGGAGTGGGCCCGAACATG AAGCATTTGGAAAGCTGCATTGGGTGCGGGCACAGTGCGAAGCCGGGCCT TCAAGGATTGCACCTCGCATCCTCAATTTTTTGGTCAGTTTGAACGCCCT GACGATAGCAATTGCAGCGACGTTCTTATATCCCACACTAGGTATCCTTC GAGATGTTGGTGGCGCTGCTGCATGCCGATGCCCCCCGCAAGTACGGCAG CCAGTTTCCGCCGAAGATCCTCGGGCTGGGGCAGAGAACCAACCCGCACT GGAGGGAACAGGTGTGTCAGAGGAAAGAGCGCTCGCCTTTGCGTCGCGCC GCCTTCTTTCTTTAGTCGCAGGGCATGCCGCCGGCACCCCCGCAATCGCC GCCCCCACAGCCGCCGCCACCTCGTTTTGTTTTGCGTCTATCGTGTGTGC CGCCGCCTGCGTTCTGCCAATCCGCCTCTCTTTCAACAACTTTACATAAT CATCTCCTTCTTTGCCTCCACTGAAACTGGCATCTGCTCTGGCGCCGCCG TTCCCGCCCGCCGCCGCCCGGCCGAAACAAAACCGCAGGCTTCCTTCTTT GCACTGCCCAACACGGCACTCCTCCCCTACTTCAATTTTGTAGGGCGCAT GGAGCACGCTGAGGCACACGGCCACCAGCTGCTCGAGGCGGCGGGGCTCT GGGAGCGGTTCGGCGCCTCGGGCTGGGGTGCCGGCGGCGGCAGTGCATTC CTGGCGCCGGCAGCGGGCTCAGAGCACGCCACAGCGGCTGAGGCGCGCGA GGCGATGTACTACGGCGCCGGCGGCGGCGGGGAATGGGAAGGCGAAGGGG GAGCGGGAAAAGAAGGCAACGTTTCGGCGCTGCTGGCGGACGTCCGGCGG CTGTATGCCGAAGATTACACCTTGCTTGAGCGGCTTTTCGGGGCGACGGC GACGGCGGCATCGGTGCCACCAACGGTGTAGGTAGAGGCAGTGGCGGTGG CAGCGGCGGTGGTGGGCGATGAGAATAACGCGAACGATGCGGCGGCTGGA GGTGGCGGGAGACGGACGCCCACAACGGCGACATGAAGAATTACCAGAGC ATATTTGGCGGGTTAGCATCAAATTCATTATTTTAATACTGAGAAGCGGT AGAAGGGCTTTTAAAGGCAAGATGGCACATAGCATTGGCAAGGCGGAGCA AAGGAAAGAGTTTGGTGGCACCTAACAGCTGGTATTCAACCCGGATGGAA GGTGGCGCAAAGAATGAAGATCGAATTATGGTGCGTCTGCTGTAATGGTT CAATGTGATGATACGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig161:5802..9869-

>mRNA_P-wetherbeei_contig161.5.1 ID=mRNA_P-wetherbeei_contig161.5.1|Name=mRNA_P-wetherbeei_contig161.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1950bp|location=Sequence derived from alignment at P-wetherbeei_contig161:5802..9869- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGTTCCTTCTTCTCCTCAGCTTTCTACGACTTCTCGTGCAAGCCGG
AGCTCGCGGTGGGCCCTGCGCCTACGCCGTGGCAATCGCGACCTTGCCTG
ACGAGAGCGACATCGCGTACGCCGCCTTCTTCGCAGGAGCAATACGGCTC
GCCGAGCCCGCGTGCGACGTCCTCGCCCTCGTCGCAAGCCACCTCTTTCC
GTCCCTGGCGGCCCCGCTCCAGGCTGCCGGGATCACACCGCGCGCCGCCG
ACCTGGCCGTGCCGCTGCGGGCAATCGGCAGCCAGGACCTCCACCGTTCG
ATCCTCTCCGGCAGCGGCTGGGACCTCTTGCAGCTTTCGGCGCTATCCCT
GACGAAGTATGAGCGCGTCATCATCTGCGGCAGCCTCCGTGTCGCCGTCA
TGGCGCCACTCGCCGTTGCTGCCACCGCCGGCGACCTTCTGCCGCTGTCC
AGCCGCGACTGGACGCTGGCGGTCGCAGTCCCCGTCGGCGGCAGCGGCCC
TCTGCTCCTGGGAGGCCTCATGGTGGCGCGCCCATCAGTGGCGGCGGCGG
AATCCGTCGCCCGTTTGCTCTCCATGGCCGATGTCACTCCGTGGCTGTTT
CAGAACTTTAAGCGTGGCGTCGGCAGGGGCGCCAGGGCCCGGAAGGCGGC
CTCCGTCGTCGCTCCGGTCCTCCGGAACGCCGTCGCCGCCGCTCGGCTCC
AGACCGCCAGCCTGCCCATTGGTGTGTGCCCACGCGACCCGCTGGCGACG
GCGCCACCGCCATCAGCCGACAGCGGCAGCGCGGCGGCCGCGGCTGCGTG
GTGCGAGGGCTACTTAGATCACAGAGGAACAGGCGGCGGGCGCGTGGGCG
GCGTCCGGGAGGGCGGCAAGCCGATCGTGGCGCTGCTGCCGCCGGGCGAC
CCGTGCGTCGGGGCGGAAAAGCTGCGGTTCCTGTCGGCGGCCGCGACGGA
AGAGATGTCTAGGCTGCTAGAGCTCGCCTGCTCGCGAGATTGGAGAGCCA
CCGGCGCGCCCGCCGCTCTGCCGCCGCCTCCACCACCGCTGGCGGTGAGA
CAGTCGCAGCCGGCAGCCAAAATCACGCTGACTTCGAGAGATCTTAAGGC
GATGGAGCACTTCTTCCTCGTCAACGAGCAGTACAAACTGCTGATGCTGG
CGATCCCCAAGGCGGGCAGCTCGCAGGTCCACCAGCTCTTCCTGCGGCTG
CACGGCTCTCCCGACTGGAACAGCGGCCACATCCAGCAGATTCACTTCCA
CCGCGACATTTCGCATTTCAAGGCCTCCTCTGTGCTGTCGCCACAGCGGG
CAACCGAAATCTTCAACGACCCCAGCTGGACGCGCGCCGTGCTCTTTCGG
GACCCGGCGACGCGGCTCCTGTCCGCCTTTTTGGACAAGTTTGTGATGCA
GCGCAGTTACGGCCAGCGTCTCTTCAAGAGCGATATGGTATCCTTCGAGA
TGTTGGTGGCGCTGCTGCATGCCGATGCCCCCCGCAAGTACGGCAGCCAG
TTTCCGCCGAAGATCCTCGGGCTGGGGCAGAGAACCAACCCGCACTGGAG
GGAACAGGCTTCCTTCTTTGCACTGCCCAACACGGCACTCCTCCCCTACT
TCAATTTTGTAGGGCGCATGGAGCACGCTGAGGCACACGGCCACCAGCTG
CTCGAGGCGGCGGGGCTCTGGGAGCGGTTCGGCGCCTCGGGCTGGGGTGC
CGGCGGCGGCAGTGCATTCCTGGCGCCGGCAGCGGGCTCAGAGCACGCCA
CAGCGGCTGAGGCGCGCGAGGCGATGTACTACGGCGCCGGCGGCGGCGGG
GAATGGGAAGGCGAAGGGGGAGCGGGAAAAGAAGGCAACGTTTCGGCGCT
GCTGGCGGACGTCCGGCGGCTGTATGCCGAAGATTACACCTTGCTTGAGC
GGCTTTTCGGGGCGACGGCGACGGCGGCATCGGTGCCACCAACGGTGTAG
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