mRNA_P-wetherbeei_contig161.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: D8LIV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV5_ECTSI) HSP 1 Score: 212 bits (540), Expect = 4.550e-54 Identity = 107/228 (46.93%), Postives = 150/228 (65.79%), Query Frame = 1
Query: 1141 RQSQPAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSV--LSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVMQRSYGQRLFKSDMV-SFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWGAGGGSAFL 1815
++ +P K +T DL + +HF+L N ++K+LM+AIPK +QVH LFLRL GS +WN+ +++IH+H+D+ +K S++ + P+RA+ I NDP+WT+ V RDP RLLS FLDK V +RSY +FK++ V SFE V L A + +P LGL +R+NPHWR Q FF L LPYF+FVG +H + H + L+ AGLWE+FGASGWG G +AF
Sbjct: 695 QEVKPKQKAVVTQEDLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWNTQRMEEIHYHKDMDKYKLSTMPNMPPERASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQKDYPGGNLGLTRRSNPHWRPQL-FFGLDK--FLPYFDFVGDFKHVQEHSEEFLKRAGLWEKFGASGWGRWGQAAFF 919
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: F0Y5E9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E9_AURAN) HSP 1 Score: 128 bits (322), Expect = 8.900e-29 Identity = 81/217 (37.33%), Postives = 115/217 (53.00%), Query Frame = 1
Query: 1153 PAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVMQR-----SYGQRLFKSDMVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGW 1788
P A ++ ++L+ +H V+ ++KLL A+PK ++ +LF RL G + N HF +D F + +++ AT + NDP+WT+ +RDPA RLLSA+LDKF + SY R+FK ++F V + A R G K GL TNPHWR Q F LP +NFVG +H H +LL A GLWE +GA+GW
Sbjct: 25 PRAPLSYREQELRYAQHHMYVDVKHKLLYCAVPKVACTEFMRLFFRLKGE-NQNQRWKGDPHFRQDKPLF--NKIMNVTTATALMNDPTWTKFAFWRDPAERLLSAYLDKFANGKRYSTGSYAVRIFKDKHMNFSGFVDRI-ASKNRVRG-----KPDGLHPNTNPHWRPQR--FMCNMEKFLPAYNFVGSFDHLGDHAEKLLRALGLWEAYGAAGW 230
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A7S2WJM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJM7_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.510e-25 Identity = 92/284 (32.39%), Postives = 131/284 (46.13%), Query Frame = 1
Query: 976 LLPPGDPCVGAEKL-----RFLSAAATEEMSRLLELACSRDWRATGAPAALPXXXXXLAVRQSQPAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVM----QRSYGQRLFKSD-MVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWGAG 1797
LL P DP + L FL T++ C+ R TG AL + Q +P I L S D + + H +V+ ++++L+ AIPK SS+ +LFLRL G P+W + ++ R+++ L P RA EI DPS+ + V FRDP +RLLS +LDKF Y ++F + ++SF +F K+ G N HWR QA + L ++F G E HG L AGLW+ FG SGWG G
Sbjct: 43 LLSPADPYAAIDGLGRRTSTFLLPVKTQDAELRPLCPCNGGDRGTGWRGALEQSRRSPSAEQ-RPLLPIELKSLDFRFLAHA-IVDLKHRVLICAIPKVASSEWKKLFLRLQGDPEWAAEPWWKM---RNLTSLYK---LGPARAMEILQDPSFIKGVFFRDPFSRLLSCYLDKFSAGTHRANKYSLKIFGDNHLLSFP----------------EFLKKVTAAGAPMNVHWRPQADICQIEE--LFHLYSFFGNFERLPEHGRAFLTQAGLWKEFGESGWGPG 300
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A7S3JPI6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPI6_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.600e-25 Identity = 72/206 (34.95%), Postives = 109/206 (52.91%), Query Frame = 1
Query: 1183 DLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFV----MQRSYGQRLFKSDMVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGW 1788
+L+ H +++++KL+ IPK ++ + F RL G + HF D S+LS AT I NDP++T+ V FRDP RL SA++DKF SY +L+++ ++F V +L + P + G++ GLG +TNPHWR Q L LP +NF+G H H ++L+A GLWE++G SGW
Sbjct: 61 ELRYAAHHAFIDKRHKLVYCGIPKVACTEFFRFFFRLKGEHRDRGRWLGDPHFRSDRP---LLSMLSTDEATAIMNDPAYTKFVYFRDPVDRLRSAWMDKFHNWHRYTMSYKVKLYQNKNLTFSEFVDIL-LEKPSRNGNR------GLGPKTNPHWRPQRYLCNLEK--FLPLYNFIGSFSHLFEHNKRMLQALGLWEQYGQSGW 254
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A835YWJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ0_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.000e-24 Identity = 89/301 (29.57%), Postives = 129/301 (42.86%), Query Frame = 1
Query: 1150 QPAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFRDPATRLLS----------------------------------------------------AFLDKFVMQRSYGQRLFKSDM--VSFEMLVALLHA-----------DAPRKY--------------------GSQFPPKILGLG--QRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWG 1791
QPAA +T T D+ A++HF+LVN+++KLL LAIPK +Q+ QLFLR + DW++ + IHFH +A + ++ + T I NDP WTRAV+ R+P R+LS A+LDK+V+ SYG R+ ++D VSF V + P + G + + G +PH R QA F LPY NF+ + H ++LE G+WE++GASGWG
Sbjct: 512 QPAAPVTATDADVVALQHFWLVNKRHKLLYLAIPKVACTQMIQLFLRAVNATDWDTDVMANIHFHSGNKRIRAKTQVTAAQLTAIMNDPQWTRAVVLREPRRRVLSLPCVRALFRPLRYPDKLVCGLLSPRRLPRVLTIVTNVRALWRLRDQLTQLPCAYLDKYVLHGSYGDRV-RADKRYVSFHEFVEVXXXXXXXXXXXXXESTPVRXXXXXXXXXXXXXXXXXQVDTGMRLARRRTGAHPLSTVDPHHRPQALFM----DKFLPYMNFIAEYTQVQHHVREMLEKVGMWEQYGASGWG 807
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A7S3LEC1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEC1_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.280e-24 Identity = 89/234 (38.03%), Postives = 117/234 (50.00%), Query Frame = 1
Query: 1210 LVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRD-ISHFKASSVLS------PQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVMQRSYGQRLFK-SDMVSFEML----VALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWGAGGGSAFLAPAAGSEHATAAEAREAMYY 1875
+V E +KLL IPK G + QLF R++G W H D I H S+ L+ P+ A + DPSWTRA+ FRDP RLLSA+LDK + + R+ + S +ML V L P + F KI+ Q +PHWR QA LP+ PY NFVG M+H E +LL+ G W+ FGA GW +G A + AA HAT A + + YY
Sbjct: 140 IVIESHKLLFFTIPKVGCTVFKQLFRRMYGYQSWKE--------HNDFIPHHPMSNGLNYLYHYKPREAERMLTDPSWTRAIFFRDPKERLLSAYLDKVLHENGKYVRVHCCGNNPSLKMLLHCQVLLDKLPNPLLTFADFLEKIVL--QCKDPHWRPQAH--RLPDL-YWPYINFVGHMDHIEQDTKRLLQKIGAWDEFGAHGWESG---AIFSGAASVAHATDARQKVSSYY 357
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A7S4E7B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7B5_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.100e-22 Identity = 102/325 (31.38%), Postives = 138/325 (42.46%), Query Frame = 1
Query: 1141 RQSQPAAKIT----------LTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQ--------QIHFHRDISHFKA-----SSVLSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFV----MQRSYGQRLFKSDMVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWG--AGGGSAFLAPAAGSE----------HATAAEAREAMYYGAGGGGEWEGEGGAGKEGNVSALLADVRRLYAEDYTLLERL 1998
RQ++ A+IT +L H V+ ++KLL AIPK ++ +LF R+ S + Q Q + + HF+ + V +P+ AT ND ++T+ V FRDPA RLLSA+LDKF + YG R+FK ++F V + R+ GL TNPHWR Q L LP + FVG H H +L A LWE FGA GW A GGS + PA G HA ++ YY LLA VR+ YA DY +LE +
Sbjct: 39 RQTRGQARITPRKPQLPHLQYRKHELDYASHHAYVDFEHKLLYCAIPKVACTEFFRLFHRMADSKKKCATVGQCATQMTERQRNRWKGDPHFRPDKPILNKVATPEEATHAMNDKNFTKFVFFRDPAERLLSAYLDKFEHGSRYRVGYGLRIFKDPKMNFSGFVERIERVNKRRSNPD------GLHPHTNPHWRPQRFMCNLEK--FLPLYTFVGSFTHLREHTELMLRQANLWEEFGARGWPLKAPGGSGKV-PARGPTGSMFQKNTAWHADGTSSKTEQYY-------------------TPELLARVRKAYAMDYEMLESI 335
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A8J2SW07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW07_9STRA) HSP 1 Score: 105 bits (261), Expect = 4.480e-20 Identity = 88/304 (28.95%), Postives = 135/304 (44.41%), Query Frame = 1
Query: 1153 PAAKITLTSRDLKAMEHFFLVNEQYKLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLS---PQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFV------MQRSYGQRLFKSDMVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWGAGGGSAFLAP-------------AAGSEHATAAEAREAMYYGAGGGGEWEGEGGAGKEGNVSALLADVRRLYAEDYTLLERL 1998
P I L R+ + F V+ ++K+ AIPK ++ +L RL G W + HF D AS++L + A I ND +WT+ RDPATR LSA+LDKFV + +YG R F ++ E + L + R + P+ L +G +N HW+ Q +L L + F+GR E H LL + LW+ +G+ GWG L P A ++H+T A+AR+A Y ++L+ +R +YA DY +L+ +
Sbjct: 125 PTDHIPLGPREPRFALRSFYVSRKHKIAFCAIPKVACTEFIRLMYRLEGDVHW----WKDPHFRTD-----ASTLLKRGDEREAEHILNDANWTKVAFLRDPATRALSAYLDKFVDSPSRGIHGNYGLRHFGRELNWTEFVDTLGSENTDR-----YKPEGLHVG--SNAHWKPQRFHCSLEK--FLTKYQFIGRYESLRDHAEMLLRSLNLWDAYGSKGWGHRDKRQRLMPKPSDSIPVRDSLFAQKAKHSTNADARKASYL-------------------TPSILSKLREIYAMDYEMLDAI 391
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A1E7FXT2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXT2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.030e-16 Identity = 63/189 (33.33%), Postives = 93/189 (49.21%), Query Frame = 1
Query: 1228 KLLMLAIPKAGSSQVHQLFLRLHGSPDWNSGHIQQIHFHRDISHFKASSVLSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVMQRSYG---QRLFKSDMVSFEMLVALLHADAPRKYGSQ---FPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFG 1776
KL IPK G + Q + G+ D+ S H D+ ++ +L+P I+ DP WT A + R+PA RLLSA+LDK + R G ++L ++ +FE+ + L + P Q P + GL T+PHWR Q F + + F+F+G ++H E H LLE GLWE G
Sbjct: 259 KLAFCGIPKVGITNWLQFIRFVMGAHDYASF----PHGKPDLRYWNFD-ILNPDIQRRIWEDPEWTFATILRNPADRLLSAYLDKLKVGRGSGAIAKQLKFTESFTFEVFLEYLEKEPPEDLNCQDKDLPAVLTGLSWCTDPHWRPQV--FGCGLSEKIDRFDFIGSLDHIEKHSQALLEKVGLWESHG 440
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Match: A0A7S2WKE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKE2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 9.110e-16 Identity = 53/145 (36.55%), Postives = 68/145 (46.90%), Query Frame = 1
Query: 1378 LSPQRATEIFNDPSWTRAVLFRDPATRLLSAFLDKFVM----QRSYGQRLFKSD-MVSFEMLVALLHADAPRKYGSQFPPKILGLGQRTNPHWREQASFFALPNTALLPYFNFVGRMEHAEAHGHQLLEAAGLWERFGASGWGAG 1797
L P RA EI DPS+ + V FRDP +RLLS +LDKF Y ++F + ++SF +F K+ G N HWR QA + L ++F G E HG L AGLW+ FG SGWG G
Sbjct: 10 LGPARAMEILQDPSFIKGVFFRDPFSRLLSCYLDKFSAGTHRANKYSLKIFGDNHLLSFP----------------EFLKKVTAAGAPMNVHWRPQADICQIEE--LFHLYSFFGNFERLPEHGRAFLTQAGLWKEFGESGWGPG 136 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig161.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig161.5.1 >prot_P-wetherbeei_contig161.5.1 ID=prot_P-wetherbeei_contig161.5.1|Name=mRNA_P-wetherbeei_contig161.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=650bp MQFLLLLSFLRLLVQAGARGGPCAYAVAIATLPDESDIAYAAFFAGAIRLback to top mRNA from alignment at P-wetherbeei_contig161:5802..9869- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig161.5.1 ID=mRNA_P-wetherbeei_contig161.5.1|Name=mRNA_P-wetherbeei_contig161.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4068bp|location=Sequence derived from alignment at P-wetherbeei_contig161:5802..9869- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig161:5802..9869- >mRNA_P-wetherbeei_contig161.5.1 ID=mRNA_P-wetherbeei_contig161.5.1|Name=mRNA_P-wetherbeei_contig161.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1950bp|location=Sequence derived from alignment at P-wetherbeei_contig161:5802..9869- (Phaeothamnion wetherbeei SAG_119_79)back to top |