mRNA_P-wetherbeei_contig16098.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Match: A0A352KGX8_9PROT (ATP-dependent protease subunit HslV n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KGX8_9PROT) HSP 1 Score: 293 bits (751), Expect = 3.860e-99 Identity = 151/184 (82.07%), Postives = 167/184 (90.76%), Query Frame = 1
Query: 4 MSSSNSADPTGWHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPLGAGDVIAGFAGATADAMTLFERLEGKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEQGLVGIGSGGAYAQAAAMALLDMELSAEDIVRRSMAIAAQICIYTNSNVTLETL 555
MSSS++ADPTGWHGTTILS+RK +V IAGDGQVTLG+ VIKA+ARKVRPLG G VIAGFAGATADA TLFERLE KLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMM VAD VSLVLTGTGDVLEPE+G++GIGSGG YAQAAA+AL+DM+L AE+I RR+MAIAA IC+YTN N+TLE L
Sbjct: 1 MSSSHAADPTGWHGTTILSIRKGDMVVIAGDGQVTLGDTVIKASARKVRPLGNGSVIAGFAGATADAFTLFERLEAKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMAVADAQVSLVLTGTGDVLEPERGVIGIGSGGNYAQAAALALIDMDLPAEEIARRAMAIAADICVYTNQNITLEKL 184
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Match: HSLV_PARL1 (ATP-dependent protease subunit HslV n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=HSLV_PARL1) HSP 1 Score: 271 bits (692), Expect = 2.650e-90 Identity = 134/177 (75.71%), Postives = 158/177 (89.27%), Query Frame = 1
Query: 25 DPTGWHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPLGAGDVIAGFAGATADAMTLFERLEGKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEQGLVGIGSGGAYAQAAAMALLDMELSAEDIVRRSMAIAAQICIYTNSNVTLETL 555
DP WHGTTIL+VRK G V IAGDGQV++G+ ++K NARKVRPLG GDVIAGFAGATADAMTLFERLE K+EQ+PGQLTRA VE+AKDWRTDR+LRRLEA+MIVADK+ +LVLTG GDVLEPE G+VGIGSGG YA AAA AL+DM+LSAE+I R++M IAA IC+YTN+N+T+E+L
Sbjct: 4 DPINWHGTTILTVRKGGKVVIAGDGQVSMGDTIMKGNARKVRPLGKGDVIAGFAGATADAMTLFERLEAKIEQYPGQLTRACVELAKDWRTDRFLRRLEALMIVADKEATLVLTGNGDVLEPESGVVGIGSGGNYALAAARALIDMDLSAEEIARKAMGIAASICVYTNNNLTVESL 180
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Match: A0A6L5FPI2_9HYPH (ATP-dependent protease subunit HslV n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FPI2_9HYPH) HSP 1 Score: 270 bits (691), Expect = 4.020e-90 Identity = 139/173 (80.35%), Postives = 153/173 (88.44%), Query Frame = 1
Query: 37 WHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPLGAGDVIAGFAGATADAMTLFERLEGKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEQGLVGIGSGGAYAQAAAMALLDMELSAEDIVRRSMAIAAQICIYTNSNVTLETL 555
WHGTTIL+VRK GIVAI GDGQV++G +IK NA+KVRPLG GDVI GFAGATADA TLFERLEGKLEQ+PGQLTRAAVE+AKDWRTDRYLRRLEAMMIVAD+ VSLVLTGTGDVLEPE G++GIGSGG YA AAA ALLD L AE IVRR++ IAA IC+YTN NVT+ETL
Sbjct: 9 WHGTTILTVRKGGIVAIGGDGQVSIGQTIIKGNAKKVRPLGKGDVIGGFAGATADAFTLFERLEGKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADRQVSLVLTGTGDVLEPEAGVMGIGSGGNYALAAARALLDGPLDAEAIVRRALDIAADICVYTNRNVTIETL 181
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Match: A0A285SXX0_9HYPH (ATP-dependent protease subunit HslV n=6 Tax=Stappia TaxID=152161 RepID=A0A285SXX0_9HYPH) HSP 1 Score: 268 bits (686), Expect = 2.400e-89 Identity = 139/177 (78.53%), Postives = 152/177 (85.88%), Query Frame = 1
Query: 25 DPTGWHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPLGAGDVIAGFAGATADAMTLFERLEGKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEQGLVGIGSGGAYAQAAAMALLDMELSAEDIVRRSMAIAAQICIYTNSNVTLETL 555
DPTGWHGTTILSVRK G V IAGDGQV+LG VIK ARKVRPL G+VIAGFAGATADA TLFERLE KLEQ+PGQL RA VE+AKDWRTDRYLRRLEAMM+VADK VSLVLTGTGDVLEPE G++GIGSGG YA AAA AL D ++ AE I RR+MAIAA IC+YTN N+T+ETL
Sbjct: 6 DPTGWHGTTILSVRKGGKVVIAGDGQVSLGPTVIKHTARKVRPLAKGEVIAGFAGATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKSVSLVLTGTGDVLEPEGGVMGIGSGGNYALAAARALADTDMDAETIARRAMAIAADICVYTNGNLTIETL 182
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Match: A0A833GEV7_9HYPH (ATP-dependent protease subunit HslV n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GEV7_9HYPH) HSP 1 Score: 268 bits (686), Expect = 2.480e-89 Identity = 140/184 (76.09%), Postives = 157/184 (85.33%), Query Frame = 1
Query: 4 MSSSNSADPTGWHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPLGAGDVIAGFAGATADAMTLFERLEGKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEQGLVGIGSGGAYAQAAAMALLDMELSAEDIVRRSMAIAAQICIYTNSNVTLETL 555
MS SNSA WHGTTIL+VRK G+VAI GDGQV++G V+KANA+KVR +G G+VI GFAGATADA TLFERLE KLEQ+PGQL RAAVE+AKDWRTDRYLRRLEAMMIVADKD+SLVLTGTGDVLEPE G++GIGSGG YA AAA AL D L AE IVR+S+ IAA IC+YTN NVT+ETL
Sbjct: 1 MSHSNSASGGPWHGTTILTVRKGGVVAIGGDGQVSIGQTVVKANAKKVRRIGKGEVIGGFAGATADAFTLFERLESKLEQYPGQLLRAAVELAKDWRTDRYLRRLEAMMIVADKDISLVLTGTGDVLEPEAGVMGIGSGGNYALAAARALADGPLDAETIVRKSLDIAADICVYTNRNVTIETL 184
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Match: A0A327KV56_9HYPH (ATP-dependent protease subunit HslV n=5 Tax=Rhodoplanes TaxID=29407 RepID=A0A327KV56_9HYPH) HSP 1 Score: 268 bits (686), Expect = 3.150e-89 Identity = 137/184 (74.46%), Postives = 157/184 (85.33%), Query Frame = 1
Query: 7 SSSNSADPTGWHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPLGAGDVIAGFAGATADAMTLFERLEGKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEQGLVGIGSGGAYAQAAAMALLDMELSAEDIVRRSMAIAAQICIYTNSNVTLETLP 558
S+S ++P WHGTTI++VRK GIVA+ GDGQV++G ++K NA+KVR L GDVI GFAGATADA TLFERLE KLEQ+PGQL RAAVE+AKDWRTDRYLRRLEAMMIVAD VSLVLTG GDVLEPE G+VGIGSGG YA AAA AL+D +L AE IVRRS+AIAA+IC+YTN NVT+ETLP
Sbjct: 8 SASGRSEPPSWHGTTIVTVRKGGIVAVGGDGQVSIGQTIVKGNAKKVRRLAKGDVIGGFAGATADAFTLFERLEAKLEQYPGQLMRAAVELAKDWRTDRYLRRLEAMMIVADPKVSLVLTGNGDVLEPENGVVGIGSGGNYALAAARALVDTDLDAETIVRRSLAIAAEICVYTNRNVTVETLP 191
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Match: HSLV_RHOPA (ATP-dependent protease subunit HslV n=16 Tax=Proteobacteria TaxID=1224 RepID=HSLV_RHOPA) HSP 1 Score: 268 bits (685), Expect = 3.910e-89 Identity = 141/183 (77.05%), Postives = 155/183 (84.70%), Query Frame = 1
Query: 7 SSSNSADPTGWHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPLGAGDVIAGFAGATADAMTLFERLEGKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEQGLVGIGSGGAYAQAAAMALLDMELSAEDIVRRSMAIAAQICIYTNSNVTLETL 555
SSS A P WHGTTIL+VRK G V I GDGQV++G VIKANA+KVR LG GDVI GFAGATADA TLFERLE KLEQ+PGQLTRAAVE+AKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPE G++ IGSGG YA AAA AL+D + AE IVR+S+ IAA IC+YTN N+TLETL
Sbjct: 5 SSSADAGPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEAGVMAIGSGGNYALAAARALIDTDQDAETIVRKSLGIAADICVYTNGNLTLETL 187
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Match: A0A2N3EIX0_9PROT (ATP-dependent protease subunit HslV n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EIX0_9PROT) HSP 1 Score: 268 bits (684), Expect = 4.520e-89 Identity = 134/177 (75.71%), Postives = 156/177 (88.14%), Query Frame = 1
Query: 25 DPTGWHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPLGAGDVIAGFAGATADAMTLFERLEGKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEQGLVGIGSGGAYAQAAAMALLDMELSAEDIVRRSMAIAAQICIYTNSNVTLETL 555
DP WHGTTILSVRK G VAIAGDGQV++G+ ++K NARKVRPLG GDVIAGFAGATADAMTLFERLE ++EQ+PGQL RA VE+AKDWRTD+YLRRLEAMMIVAD+ V+LVLTG GDVLEPE G+VGIGSGG YA AAA AL DM+L AE+IVR++M IAA IC+YTN+N+T+E +
Sbjct: 5 DPINWHGTTILSVRKAGRVAIAGDGQVSMGDTIMKGNARKVRPLGKGDVIAGFAGATADAMTLFERLEARIEQYPGQLMRACVELAKDWRTDKYLRRLEAMMIVADRQVTLVLTGNGDVLEPEAGVVGIGSGGNYALAAARALADMDLDAEEIVRKAMGIAADICVYTNNNLTVEVI 181
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Match: A0A2S6QAH2_9PROT (ATP-dependent protease subunit HslV n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6QAH2_9PROT) HSP 1 Score: 267 bits (682), Expect = 8.810e-89 Identity = 140/178 (78.65%), Postives = 152/178 (85.39%), Query Frame = 1
Query: 25 DPTGWHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPLGAGDVIAGFAGATADAMTLFERLEGKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEQGLVGIGSGGAYAQAAAMALLDM-ELSAEDIVRRSMAIAAQICIYTNSNVTLETL 555
DPT WHGTTILSVRKNG V IAGDGQVT GN VIK+NARKVRPLG G VIAGFAGATADA TLFERLE KLEQ PGQLTRA VE+AKDWRTDR+LRRLEAMM VAD DVSLVLTGTGDVLEPE GL+GIGSGG++A AAA L D +L AE+I RR+M IAA ICIYTN N+ +E+L
Sbjct: 5 DPTHWHGTTILSVRKNGKVVIAGDGQVTFGNTVIKSNARKVRPLGDGGVIAGFAGATADAFTLFERLEAKLEQHPGQLTRACVELAKDWRTDRFLRRLEAMMAVADIDVSLVLTGTGDVLEPENGLIGIGSGGSFALAAARGLFDQKDLEAEEIARRAMKIAADICIYTNENIVIESL 182
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Match: A0A1W6ZP57_9HYPH (ATP-dependent protease subunit HslV n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZP57_9HYPH) HSP 1 Score: 267 bits (682), Expect = 1.040e-88 Identity = 141/184 (76.63%), Postives = 157/184 (85.33%), Query Frame = 1
Query: 4 MSSSNSADPTGWHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPLGAGDVIAGFAGATADAMTLFERLEGKLEQFPGQLTRAAVEMAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEQGLVGIGSGGAYAQAAAMALLDMELSAEDIVRRSMAIAAQICIYTNSNVTLETL 555
MSSS + WHGTTIL+VRKNGIVAI GDGQV++G V+KANA+KVR LG GDVI GFAGATADA TLFERLE KLEQ+PGQL RAAVE+AKDWRTDRYLRRLEAMMIVADK VSLVLTGTGDVLEP+ G++GIGSGG YA AAA AL D LSAE+ VR+S+ IAA IC+YTN NVT+ETL
Sbjct: 1 MSSSEPSRSPIWHGTTILTVRKNGIVAIGGDGQVSIGQTVVKANAKKVRRLGKGDVIGGFAGATADAFTLFERLESKLEQYPGQLLRAAVELAKDWRTDRYLRRLEAMMIVADKQVSLVLTGTGDVLEPQAGIMGIGSGGNYALAAARALADGPLSAEETVRKSLDIAADICVYTNRNVTVETL 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16098.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16098.1.1 >prot_P-wetherbeei_contig16098.1.1 ID=prot_P-wetherbeei_contig16098.1.1|Name=mRNA_P-wetherbeei_contig16098.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=191bp MSSSNSADPTGWHGTTILSVRKNGIVAIAGDGQVTLGNIVIKANARKVRPback to top mRNA from alignment at P-wetherbeei_contig16098:49..624- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16098.1.1 ID=mRNA_P-wetherbeei_contig16098.1.1|Name=mRNA_P-wetherbeei_contig16098.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig16098:49..624- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16098:49..624- >mRNA_P-wetherbeei_contig16098.1.1 ID=mRNA_P-wetherbeei_contig16098.1.1|Name=mRNA_P-wetherbeei_contig16098.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig16098:49..624- (Phaeothamnion wetherbeei SAG_119_79)back to top |