mRNA_P-wetherbeei_contig16036.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Match: A0A7X8XQY7_9BURK (Transcription termination factor Rho n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XQY7_9BURK) HSP 1 Score: 593 bits (1529), Expect = 3.160e-207 Identity = 297/384 (77.34%), Postives = 332/384 (86.46%), Query Frame = 1
Query: 1 GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGLLKVSSVNNMDPDQARRRPHFEQLTPIFPNERYTMEAG-----------------------DNDFSKRIIDLFCPIGKGQRGLIVAPPKAGKTILLKKIANGIAANYPDTVLLALLIDERPEEVTDMERSIKEGEVVSSTFDEPPEQHAHVSELVLAKAMRMVEMGRDVVILLDSLTRMGRAYNNITPPSGRTLSGGLDTAALRMPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELDLSRRLAERRIFPAIDIKKSGTRHEELLLSEDGLRKVWLMRRALDLLGDGQDPTEAVLERMKKTRTNQEFLDSLGKEASYAG 1083
G+GFLRGR+YLP P DIYVS+SQV+RF LRMGDMV GQVRPPKSGEKY+GLLKV VN +DP+ ARRRPHF+QLTPIFPNERY++E D S RIIDLFCPIGKGQRGLIVAPPKAGKTILLKK+ANGI AN+P+T+L+ALL+DERPEEVTDM+RSI+ GEV++STFDEPPEQHAHVS+LVL KA R+VEMG+DVVILLDSLTRMGRAYNN TPPSGRTLSGGLD AALRMPKRFFG+ARNIENGGSLTIIATALIETGSKMD+VIFEEFKGTGNME+DLSRRLAERRIFPA+D+KKSGTRHEELLL E+ LRK+WLMRRALDLLG QDPTEAV+ERMKKTR+N +FL LG+EA+ G
Sbjct: 295 GFGFLRGRTYLPSPNDIYVSISQVKRFDLRMGDMVTGQVRPPKSGEKYFGLLKVVMVNGIDPEVARRRPHFDQLTPIFPNERYSLETDCTQILAERVAXXXXXXXXXXXXXXXDISARIIDLFCPIGKGQRGLIVAPPKAGKTILLKKLANGITANFPETILMALLVDERPEEVTDMDRSIR-GEVIASTFDEPPEQHAHVSQLVLEKARRLVEMGKDVVILLDSLTRMGRAYNNTTPPSGRTLSGGLDIAALRMPKRFFGSARNIENGGSLTIIATALIETGSKMDDVIFEEFKGTGNMEVDLSRRLAERRIFPALDLKKSGTRHEELLLGEEDLRKIWLMRRALDLLGADQDPTEAVIERMKKTRSNADFLSMLGREAAPRG 677
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Match: A0A522QM62_9BACT (Transcription termination factor Rho n=3 Tax=bacterium TaxID=1869227 RepID=A0A522QM62_9BACT) HSP 1 Score: 498 bits (1281), Expect = 2.630e-173 Identity = 241/357 (67.51%), Postives = 297/357 (83.19%), Query Frame = 1
Query: 1 GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGLLKVSSVNNMDPDQARRRPHFEQLTPIFPNERYTMEAGDNDFSKRIIDLFCPIGKGQRGLIVAPPKAGKTILLKKIANGIAANYPDTVLLALLIDERPEEVTDMERSIKEGEVVSSTFDEPPEQHAHVSELVLAKAMRMVEMGRDVVILLDSLTRMGRAYNNITPPSGRTLSGGLDTAALRMPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELDLSRRLAERRIFPAIDIKKSGTRHEELLLSEDGLRKVWLMRRALDLLGDGQDPTEAVLERMKKTRTNQEFLDSLGKEA 1071
GYGFLR +YLPG D+YVS SQVRRF LR GDMV+GQVR PK GEKYYGL+KV +++ +DP+ RRRP+F++LTPI+P ERY +E S RIIDLFCPIGKGQR LIV+PPKAGKT LLK IAN ++ N+PD +L+ALL+DERPEEVTDM RSI +GEVV+STFDE PE H V+EL + +A R+VE+G+DVVILLDS+TR+ RAYN + P SGRTLSGGLDTAAL PKRFFGAAR IE GGSLTII TAL++TGSKMD+VIFEEFKGTGNMEL+L+R+LAE R+FPA+DIK+S TRHEELLL E LRK+W++RRA +++ + + TE VL+++ +TRTN+EFL ++ KEA
Sbjct: 61 GYGFLRRENYLPGTNDVYVSQSQVRRFELRRGDMVVGQVRCPKEGEKYYGLIKVDTIDGLDPEAVRRRPNFDKLTPIYPQERYRLEVRATQLSTRIIDLFCPIGKGQRALIVSPPKAGKTTLLKNIANSLSINHPDAILIALLVDERPEEVTDMRRSI-DGEVVASTFDEHPENHTAVAELAMERAKRLVELGKDVVILLDSITRLARAYNQVIPTSGRTLSGGLDTAALHKPKRFFGAARKIEEGGSLTIIGTALVDTGSKMDDVIFEEFKGTGNMELNLNRKLAESRVFPAVDIKRSSTRHEELLLGELELRKIWMLRRAFNIIKESE-MTEMVLDKLAQTRTNEEFLQTITKEA 415
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Match: A0A2W5XDG4_9BACT (Transcription termination factor Rho n=1 Tax=Candidatus Eremiobacteraeota bacterium TaxID=2052317 RepID=A0A2W5XDG4_9BACT) HSP 1 Score: 488 bits (1255), Expect = 2.900e-169 Identity = 241/357 (67.51%), Postives = 292/357 (81.79%), Query Frame = 1
Query: 1 GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGLLKVSSVNNMDPDQARRRPHFEQLTPIFPNERYTMEAGDNDFSKRIIDLFCPIGKGQRGLIVAPPKAGKTILLKKIANGIAANYPDTVLLALLIDERPEEVTDMERSIKEGEVVSSTFDEPPEQHAHVSELVLAKAMRMVEMGRDVVILLDSLTRMGRAYNNITPPSGRTLSGGLDTAALRMPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELDLSRRLAERRIFPAIDIKKSGTRHEELLLSEDGLRKVWLMRRALDLLGDGQDPTEAVLERMKKTRTNQEFLDSLGKEA 1071
GYGFLR YL GP DIYVS SQ+RRF LR GD+V GQVR PK GEKYYGL+KV ++N DP+ R R FE+ TPI+P ER+ +E S R+ID+FCPIGKGQR LIV+PPKAGKT LLK IAN I+ N+PD ++ALL+DERPEEVTDM+R+I +GEVV+STFDE PE H V+EL + +A R+VE+G+DVVILLDS+TR+ RAYN + P SGRTLSGGLDTA+L PKRFFGAAR IE GGSLTIIATALIETGSKMD+VIFEEFKGTGNMEL+L+R+LAE R+FPA+DIK+SGTRHEELLL+E+ +RK+W++RRA +L G D TE +L+RM +TRTN EFL ++ KEA
Sbjct: 62 GYGFLRRDGYLIGPDDIYVSQSQIRRFELRRGDLVDGQVRRPKEGEKYYGLIKVETINGFDPEAIRGRRVFEKGTPIYPQERFKLEVRSTQLSTRVIDVFCPIGKGQRALIVSPPKAGKTTLLKNIANSISINHPDAHIIALLVDERPEEVTDMQRTI-DGEVVASTFDEHPENHTAVAELTMERAKRLVELGKDVVILLDSITRLARAYNQVIPTSGRTLSGGLDTASLHKPKRFFGAARKIEEGGSLTIIATALIETGSKMDDVIFEEFKGTGNMELNLTRKLAESRVFPAVDIKRSGTRHEELLLNEEEMRKIWMLRRATAVLNAG-DITELILDRMAQTRTNDEFLQTVTKEA 416
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Match: A0A7V3K3R1_9CHLR (Transcription termination factor Rho n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V3K3R1_9CHLR) HSP 1 Score: 487 bits (1253), Expect = 3.450e-169 Identity = 233/356 (65.45%), Postives = 292/356 (82.02%), Query Frame = 1
Query: 1 GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGLLKVSSVNNMDPDQARRRPHFEQLTPIFPNERYTMEAGDNDFSKRIIDLFCPIGKGQRGLIVAPPKAGKTILLKKIANGIAANYPDTVLLALLIDERPEEVTDMERSIKEGEVVSSTFDEPPEQHAHVSELVLAKAMRMVEMGRDVVILLDSLTRMGRAYNNITPPSGRTLSGGLDTAALRMPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELDLSRRLAERRIFPAIDIKKSGTRHEELLLSEDGLRKVWLMRRALDLLGDGQDPTEAVLERMKKTRTNQEFLDSLGKE 1068
G GFLR LPGP D+YVS SQ+RRFG+R GD V+GQVRPPK EKYYGLL+V ++N +DP+ A+RRPHF+ LTPIFPN++ +E + S R+ID+ PIG+GQRGLIV+PPKAGKT +LK+IANGI NYPD L+ +LI ERPEEVTDM+RS+ E +VV+STFD+P E H V+E+ L +A R+VE RDVVILLDS+TR+ RAYN + PPSGRTLSGGLD AAL PKRFFGAARN+E GGSLTIIAT L++TGS+MD+VI+EEFKGTGNMEL L+R+LAERRIFPA+DI++SGTR EELLL ED L++ WL+RR +D +G G + T+AVLER+++TR N+EFL +L K+
Sbjct: 61 GIGFLRSDHLLPGPEDVYVSQSQIRRFGMRTGDWVVGQVRPPKDTEKYYGLLRVDAINGVDPEVAKRRPHFDSLTPIFPNQQIVLETEPHILSTRLIDIIAPIGRGQRGLIVSPPKAGKTTILKQIANGITTNYPDIHLMVVLIGERPEEVTDMDRSV-EADVVASTFDDPVENHVRVAEMALERAKRLVEGRRDVVILLDSITRLARAYNLVVPPSGRTLSGGLDPAALYPPKRFFGAARNVEEGGSLTIIATCLVDTGSRMDDVIYEEFKGTGNMELHLNRKLAERRIFPALDIERSGTRREELLLDEDTLQRSWLLRRMVDAIGGGPEATQAVLERLRRTRDNKEFLSTLNKD 415
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Match: A0A1V5P6C8_9BACT (Transcription termination factor Rho n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5P6C8_9BACT) HSP 1 Score: 485 bits (1249), Expect = 1.550e-168 Identity = 245/357 (68.63%), Postives = 293/357 (82.07%), Query Frame = 1
Query: 1 GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGLLKVSSVNNMDPDQARRRPHFEQLTPIFPNERYTMEAGDNDFSKRIIDLFCPIGKGQRGLIVAPPKAGKTILLKKIANGIAANYPDTVLLALLIDERPEEVTDMERSIKEGEVVSSTFDEPPEQHAHVSELVLAKAMRMVEMGRDVVILLDSLTRMGRAYNNITPPSGRTLSGGLDTAALRMPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELDLSRRLAERRIFPAIDIKKSGTRHEELLLSEDGLRKVWLMRRALDLLGDGQDPTEAVLERMKKTRTNQEFLDSLGKEA 1071
GYGFLR SYLPG DIYVS SQ++RF L GD V+GQ+RPPK+GE+YYGLLKV +VN + ARRR F++LTPI+P +R+T+E ++ R+IDL P+GKGQR LIVAPPKAGKTILLKKIANGI NYPD +++A+LI ERPEEVTDM+RSIK GEVVSSTFDEPP+ H V+EL+L KA R+VE RDVVILLDSLTR+ RAYN P SGRTLSGG+DT AL PK FFGAARNIE GGSLTIIATALIETGSKMD+VI+EEFKGTGNMEL+LSR+LAE+RIFPAID+KKSGTRHEELLLSE L+K+WL+RRA + D + TE +++R +K+R N EFL ++ +EA
Sbjct: 61 GYGFLRRSSYLPGSDDIYVSQSQIKRFDLCTGDSVIGQIRPPKNGERYYGLLKVITVNEDSAENARRRIPFDKLTPIYPLQRFTLETVPDEIEVRLIDLMSPLGKGQRALIVAPPKAGKTILLKKIANGITTNYPDVIVIAVLIGERPEEVTDMKRSIK-GEVVSSTFDEPPDSHTIVAELILEKAKRLVEHKRDVVILLDSLTRLARAYNLALPTSGRTLSGGIDTMALIKPKAFFGAARNIEEGGSLTIIATALIETGSKMDDVIYEEFKGTGNMELELSRKLAEKRIFPAIDLKKSGTRHEELLLSETDLQKIWLLRRAFAVF-DATEMTELLIDRTRKSRHNAEFLKTITREA 415
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Match: A0A3M1EX41_9CHLR (Transcription termination factor Rho n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1EX41_9CHLR) HSP 1 Score: 484 bits (1247), Expect = 2.820e-168 Identity = 237/353 (67.14%), Postives = 288/353 (81.59%), Query Frame = 1
Query: 1 GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGLLKVSSVNNMDPDQARRRPHFEQLTPIFPNERYTMEAGDNDFSKRIIDLFCPIGKGQRGLIVAPPKAGKTILLKKIANGIAANYPDTVLLALLIDERPEEVTDMERSIKEGEVVSSTFDEPPEQHAHVSELVLAKAMRMVEMGRDVVILLDSLTRMGRAYNNITPPSGRTLSGGLDTAALRMPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELDLSRRLAERRIFPAIDIKKSGTRHEELLLSEDGLRKVWLMRRALDLLGDGQDPTEAVLERMKKTRTNQEFLDSL 1059
G GFLR LPGP D+YVS SQ+RRFGLR GDMV+GQVRPPK EKYYGLL+V +VN +DP+QA+RRPHFE LTPIFPNE +E + ++ R+I+L PIG+GQRGLIV+PPKAGKT +LK+IANGI ANY D ++ +LI ERPEEVTDM+RS+ E EV S+TFD P + H V+E+ LA+A R+VE GRDVVIL DS+TR+ RAYN PPSGRTLSGGLD AAL PK FFGAARN+E GGSLTIIAT LI+TGS+MD+VI+EEFKGTGNMEL LSRRL ERRIFPAIDI++S TR EELLL D L+KVWL+RR +D +G G + TEAV++R+ +T++N+EFLD+L
Sbjct: 61 GIGFLRSDHLLPGPDDVYVSQSQIRRFGLRTGDMVIGQVRPPKETEKYYGLLRVEAVNGLDPEQAKRRPHFENLTPIFPNELLNLETTPHIWATRLINLLAPIGRGQRGLIVSPPKAGKTTILKQIANGITANYDDVHMMVVLIGERPEEVTDMDRSV-EAEVYSATFDAPVQDHVRVAEMSLARAKRLVEGGRDVVILADSITRLARAYNLTVPPSGRTLSGGLDPAALYPPKHFFGAARNVEEGGSLTIIATCLIDTGSRMDDVIYEEFKGTGNMELHLSRRLQERRIFPAIDIERSSTRREELLLDPDTLQKVWLLRRMIDAIGGGVEATEAVIQRLARTKSNKEFLDTL 412
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Match: A0A831X8T4_9CHLR (Transcription termination factor Rho n=2 Tax=Thermorudis peleae TaxID=1382356 RepID=A0A831X8T4_9CHLR) HSP 1 Score: 480 bits (1236), Expect = 2.230e-166 Identity = 242/356 (67.98%), Postives = 282/356 (79.21%), Query Frame = 1
Query: 1 GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGLLKVSSVNNMDPDQARRRPHFEQLTPIFPNERYTMEAGDNDFSKRIIDLFCPIGKGQRGLIVAPPKAGKTILLKKIANGIAANYPDTVLLALLIDERPEEVTDMERSIKEGEVVSSTFDEPPEQHAHVSELVLAKAMRMVEMGRDVVILLDSLTRMGRAYNNITPPSGRTLSGGLDTAALRMPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELDLSRRLAERRIFPAIDIKKSGTRHEELLLSEDGLRKVWLMRRALDLLGDGQDPTEAVLERMKKTRTNQEFLDSLGKE 1068
GYGFLRG YLPGP D+YVS SQ+RRFGLR GD V GQVRPPK EK+Y LL+V +VN MDP+ ARRRP+F+ LTPIFP E +E + S R+++L PIG+GQRGLIV+PPKAGKTILLK IANGI ANY D L+ LLI ERPEEVTDM RS+ EGEV+SSTFDEP E H V+E+ L +A R+VE G DVVILLDS+TR+ RAYN PPSGRTLSGG+D AL PKRFFGAARNIE GGSLTI+AT LI+TGS+MD+VI+EEFKGTGNMEL L R+LAERRI+PAIDI++SGTR EELLL E LR+VW MRR + +LG G D TE VL R+ KT N EFL +L K+
Sbjct: 78 GYGFLRGERYLPGPNDVYVSQSQIRRFGLRTGDWVAGQVRPPKENEKFYSLLRVETVNGMDPETARRRPNFDSLTPIFPMELINLETEPHILSTRLLNLVAPIGRGQRGLIVSPPKAGKTILLKHIANGITANYKDIHLIVLLIGERPEEVTDMRRSV-EGEVISSTFDEPVEDHIKVAEMTLERAKRLVECGYDVVILLDSITRLARAYNLAVPPSGRTLSGGIDPVALYPPKRFFGAARNIEGGGSLTIVATCLIDTGSRMDDVIYEEFKGTGNMELHLDRKLAERRIYPAIDIQRSGTRREELLLDEQTLRQVWTMRRMVSMLG-GTDGTELVLGRLAKTANNAEFLATLNKD 431
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Match: D1C2H2_SPHTD (Transcription termination factor Rho n=2 Tax=Sphaerobacteraceae TaxID=85002 RepID=D1C2H2_SPHTD) HSP 1 Score: 479 bits (1233), Expect = 3.770e-166 Identity = 242/356 (67.98%), Postives = 282/356 (79.21%), Query Frame = 1
Query: 1 GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGLLKVSSVNNMDPDQARRRPHFEQLTPIFPNERYTMEAGDNDFSKRIIDLFCPIGKGQRGLIVAPPKAGKTILLKKIANGIAANYPDTVLLALLIDERPEEVTDMERSIKEGEVVSSTFDEPPEQHAHVSELVLAKAMRMVEMGRDVVILLDSLTRMGRAYNNITPPSGRTLSGGLDTAALRMPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELDLSRRLAERRIFPAIDIKKSGTRHEELLLSEDGLRKVWLMRRALDLLGDGQDPTEAVLERMKKTRTNQEFLDSLGKE 1068
G+GFLRG YLPGP DIYVS SQ+RRFGLR GD V G VRPPK EKYY LL+V +VN MDP+ ARRRP+F+ LTPIFP E +E N S R+++L PIG+GQRGLIV+PPKAGKTILLK IANGI NY D L+ LI ERPEEVTDM+RS+ +GEV+SSTFDEP E H V+E+VL +A R+VE GRDVVILLDS+TR+ RAYN PPSGRTLSGG+D AL PKRFFGAARNIE GGSLTIIAT LI+TGS+MD+VI+EEFKGTGNMEL L R+LAERRI+PAIDI++SGTR EELLL E LR+VW MRR + +LG G + TE VL R+ KT N EFL +L K+
Sbjct: 63 GFGFLRGERYLPGPNDIYVSQSQIRRFGLRTGDWVSGHVRPPKENEKYYSLLRVEAVNGMDPETARRRPNFDSLTPIFPLELINLETSPNILSTRLLNLVAPIGRGQRGLIVSPPKAGKTILLKAIANGITTNYEDIHLIVCLIGERPEEVTDMKRSV-DGEVISSTFDEPVEDHTKVAEMVLERAKRLVESGRDVVILLDSITRLARAYNLAVPPSGRTLSGGIDPVALYPPKRFFGAARNIEGGGSLTIIATCLIDTGSRMDDVIYEEFKGTGNMELHLDRKLAERRIYPAIDIQRSGTRREELLLDEQTLRQVWTMRRMVSMLG-GTEGTELVLGRLAKTANNAEFLATLTKD 416
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Match: A0A2W4KNE8_9FIRM (Transcription termination factor Rho n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A2W4KNE8_9FIRM) HSP 1 Score: 479 bits (1234), Expect = 4.640e-166 Identity = 244/359 (67.97%), Postives = 293/359 (81.62%), Query Frame = 1
Query: 1 GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGLLKVSSVNNMDPDQARRRPHFEQLTPIFPNERYTMEAGDNDFSKRIIDLFCPIGKGQRGLIVAPPKAGKTILLKKIANGIAANYPDTVLLALLIDERPEEVTDMERSIKEGEVVSSTFDEPPEQHAHVSELVLAKAMRMVEMGRDVVILLDSLTRMGRAYNNITPPSGRTLSGGLDTAALRMPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELDLSRRLAERRIFPAIDIKKSGTRHEELLLSEDGLRKVWLMRRALDLLGDGQDPTEAV---LERMKKTRTNQEFLDSLGKE 1068
G+GFLR +YLP DIYVS SQ+RRF LR GDMV GQ RPPK E+Y+ LL+V +VN +D +QAR R HFE LTPIFPNER T+E ++R+IDL PIGKGQRGLIVAPPKAGKT+LLK+IANGIA NYPD VL+ +LIDERPEEVTDMERS++ GEV+SSTFD+ PE H ++++VL +A R+VE GRDVVILLDSLTR+ RA+N +TPPSGRTLSGGLD AA PKRFFGAARNIE GGSLTIIATALI+TGSKMD+VI+EEFKGTGNMEL L RRLAERRIFPAIDIK+SGTR EELLLS+D L +W +RR++ GD +DP E + ++R++KTR+N EF+ + +E
Sbjct: 76 GFGFLRPVNYLPSKEDIYVSPSQIRRFDLRPGDMVSGQARPPKENERYFALLRVEAVNGVDAEQARERLHFEGLTPIFPNERLTLETPGGSIAQRLIDLVAPIGKGQRGLIVAPPKAGKTVLLKQIANGIAHNYPDVVLMVVLIDERPEEVTDMERSVR-GEVLSSTFDQTPENHVKLADMVLERAKRLVEHGRDVVILLDSLTRLTRAHNLVTPPSGRTLSGGLDPAAFYKPKRFFGAARNIEEGGSLTIIATALIDTGSKMDDVIYEEFKGTGNMELHLDRRLAERRIFPAIDIKRSGTRREELLLSKDELEIMWTLRRSM---GD-RDPAEILEKFIDRLRKTRSNAEFIAQVFRE 429
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Match: A0A8B5XHR1_9CHLR (Transcription termination factor Rho n=1 Tax=Sphaerobacteraceae bacterium TaxID=2099683 RepID=A0A8B5XHR1_9CHLR) HSP 1 Score: 478 bits (1231), Expect = 7.590e-166 Identity = 235/356 (66.01%), Postives = 282/356 (79.21%), Query Frame = 1
Query: 1 GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGLLKVSSVNNMDPDQARRRPHFEQLTPIFPNERYTMEAGDNDFSKRIIDLFCPIGKGQRGLIVAPPKAGKTILLKKIANGIAANYPDTVLLALLIDERPEEVTDMERSIKEGEVVSSTFDEPPEQHAHVSELVLAKAMRMVEMGRDVVILLDSLTRMGRAYNNITPPSGRTLSGGLDTAALRMPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELDLSRRLAERRIFPAIDIKKSGTRHEELLLSEDGLRKVWLMRRALDLLGDGQDPTEAVLERMKKTRTNQEFLDSLGKE 1068
G+GFLRG YLPGP DIYVS SQ+RRFGLR GD + G VRPPK EKYY LL+V +VN MDP+ ARRRP+F+ +TPIFP E+ +E N + RI+DL P+G+GQRGL+V+PPKAGKT+LLK IANG+ +N D L+ LI ERPEEVTDM RS+ +GEV+SSTFDEP E H V+E+ L +A RMVE GRDVVILLDS+TR+ RAYN PPSGRTLSGG+D AL PKRFFGAARNIE GGSLTII+T L++TGS+MD+VI+EEFKGTGNMEL L R+LAERRI+PAID+++SGTR EELLL E LR+VW MRR + +LG G + TE VL R+ KT TN EFL +L KE
Sbjct: 63 GFGFLRGERYLPGPNDIYVSQSQIRRFGLRTGDWISGHVRPPKDNEKYYSLLRVEAVNGMDPESARRRPNFDHMTPIFPLEQIKLETAPNILATRIVDLVAPVGRGQRGLLVSPPKAGKTLLLKAIANGVTSNCDDVHLMVCLIGERPEEVTDMRRSV-DGEVISSTFDEPVEDHTKVAEMALERAKRMVESGRDVVILLDSITRLARAYNLAVPPSGRTLSGGIDPVALYPPKRFFGAARNIEGGGSLTIISTCLVDTGSRMDDVIYEEFKGTGNMELHLDRKLAERRIYPAIDVQRSGTRREELLLDESTLRQVWTMRRMVSMLG-GTEGTELVLGRLSKTGTNDEFLQTLNKE 416 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16036.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16036.1.1 >prot_P-wetherbeei_contig16036.1.1 ID=prot_P-wetherbeei_contig16036.1.1|Name=mRNA_P-wetherbeei_contig16036.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=363bp GYGFLRGRSYLPGPADIYVSMSQVRRFGLRMGDMVLGQVRPPKSGEKYYGback to top mRNA from alignment at P-wetherbeei_contig16036:467..1555- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16036.1.1 ID=mRNA_P-wetherbeei_contig16036.1.1|Name=mRNA_P-wetherbeei_contig16036.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1089bp|location=Sequence derived from alignment at P-wetherbeei_contig16036:467..1555- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16036:467..1555- >mRNA_P-wetherbeei_contig16036.1.1 ID=mRNA_P-wetherbeei_contig16036.1.1|Name=mRNA_P-wetherbeei_contig16036.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1089bp|location=Sequence derived from alignment at P-wetherbeei_contig16036:467..1555- (Phaeothamnion wetherbeei SAG_119_79)back to top |