mRNA_P-wetherbeei_contig16020.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Match: D8LMM3_ECTSI (PAS domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMM3_ECTSI) HSP 1 Score: 161 bits (407), Expect = 3.100e-43 Identity = 100/170 (58.82%), Postives = 115/170 (67.65%), Query Frame = 1
Query: 1 LDEHQRQHEKKMQKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILAVVPDAVFAFSAATGAVWFASTSAAAHFGLGQSAVESASFFDLMTADCSKRLRALIAKAGKSKPHAESVLFQERMTVCFS-RDDKRLLGELSGRLSRISTGEEAMTCIVC-VRPLGYARD 504
+EH RQ EKK+QKRAANR SAQLSRKR+K +E+L+ +N DL RH +IL V+PD VFAF A G VWFASTSA+A FGL + SA FFDLMT DCSKRLR LI A K S L ERMTV F R LLGELSGRLS+++ +T VC VRPL A D
Sbjct: 373 FEEHIRQQEKKLQKRAANRKSAQLSRKRKKALIEELRYENQDLQRHEDILEVIPDPVFAFDTANGRVWFASTSASAQFGLSVEDLTSACFFDLMTEDCSKRLRVLIDTAAKDVSETNSSLLHERMTVRFKKRKGAILLGELSGRLSQLN----GVTTAVCSVRPLSLATD 538
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Match: A0A6H5JD63_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD63_9PHAE) HSP 1 Score: 161 bits (407), Expect = 9.850e-43 Identity = 100/170 (58.82%), Postives = 115/170 (67.65%), Query Frame = 1
Query: 1 LDEHQRQHEKKMQKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILAVVPDAVFAFSAATGAVWFASTSAAAHFGLGQSAVESASFFDLMTADCSKRLRALIAKAGKSKPHAESVLFQERMTVCFS-RDDKRLLGELSGRLSRISTGEEAMTCIVC-VRPLGYARD 504
+EH RQ EKK+QKRAANR SAQLSRKR+K +E+L+ +N DL RH +IL V+PD VFAF A G VWFASTSA+A FGL + SA FFDLMT DCSKRLR LI A K S L ERMTV F R LLGELSGRLS+++ +T VC VRPL A D
Sbjct: 521 FEEHIRQQEKKLQKRAANRKSAQLSRKRKKALIEELRYENQDLQRHEDILEVIPDPVFAFDTANGRVWFASTSASAQFGLSVEDLTSACFFDLMTEDCSKRLRVLIDTAAKEVSETNSSLLHERMTVRFKKRKGAILLGELSGRLSQLN----GVTTAVCSVRPLSLATD 686
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Match: A0A835YR21_9STRA (PAS domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR21_9STRA) HSP 1 Score: 132 bits (333), Expect = 4.900e-35 Identity = 83/158 (52.53%), Postives = 105/158 (66.46%), Query Frame = 1
Query: 37 QKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILAVVPDAVFAFSAATGAVWFASTSAAAHFGLGQSAVESASFFDLMTADCSKRLRALIAKAGKSKPHAESVLFQERMTVCFSRDDKR-----LLGELSGRLSRISTGEEAMTCIVCVRPLGY 495
QKRAANR SAQLSR+R+K + +L+ ++ +L R EILAVVPD VFAF A TG + FAS SAAA FGL + +A+ FDL+TADCS RLRALIA+A P ++++L ERMTV F + LGELSGRL+R G+ A C V V L +
Sbjct: 7 QKRAANRKSAQLSRQRKKAHINELRQEHEELKRQEEILAVVPDPVFAFDALTGRISFASRSAAAQFGLRVEHLLAANLFDLVTADCSNRLRALIARALADHPGSQTLLLGERMTVRFRKGGAASNVAMALGELSGRLNRQDGGQVACVCSVRVLSLMF 164
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Match: A0A835ZC41_9STRA (E1-E2 ATPase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC41_9STRA) HSP 1 Score: 138 bits (348), Expect = 9.120e-35 Identity = 90/165 (54.55%), Postives = 110/165 (66.67%), Query Frame = 1
Query: 25 EKKMQKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILAVVPDAVFAFSAATGAVWFASTSAAAHFGLGQSAVESASFFDLMTADCSKRLRALIAKAGKSKPHAESVLFQERMTVCF-----SRDDKRLLGELSGRLSRISTGEEAMTCIVCVRPLGYARD 504
E+K+QKRAANR SAQLSR+R+K F++DL+ QN L R EIL VVPD VFAF+ G VWFAS SAAA FGL + A+FFDL+T DCS RL ALI++A + SVL +ERMTV F S + LLGELSGRL+R GE ++C+ VR L D
Sbjct: 341 ERKLQKRAANRRSAQLSRQRKKAFIDDLRSQNEALRRQEEILDVVPDPVFAFNVHDGLVWFASKSAAAQFGLRVDDLLDANFFDLVTLDCSNRLHALISRALEDDADGASVLLRERMTVRFRKGGASSNVAMLLGELSGRLNR-QDGE--VSCVCSVRLLSLMFD 502
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Match: A0A6V1RHF1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RHF1_HETAK) HSP 1 Score: 89.7 bits (221), Expect = 8.880e-18 Identity = 61/156 (39.10%), Postives = 93/156 (59.62%), Query Frame = 1
Query: 25 EKKMQKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILAVVPDAVFAFSAATGAVWFASTSAAAHFGLGQSAVESASFFDLMTADCSKRLRALIAKAGKSKPHAESVL-FQERMTVCF-SRDDKRLLGELSGRLSRISTGEEAMTCIVCVRP 486
++K+QKRAANR SAQLSRKR+K F+++LK +NA L R+ +IL +PD VFAF A +G + FAS S + + + S F+L+T K+L+ L+ K ++P E L R+ +CF ++ R+ GEL G + E+ + C+ RP
Sbjct: 123 DRKIQKRAANRKSAQLSRKRKKAFVDELKAENATLKRNKDILDCIPDLVFAFDALSGKIVFASNSVYQCLQVPTARLLDLSIFNLVTESSGKKLKELLDKVVNTRPAQEQRLDLPGRIELCFLTKYMTRVWGELDGV---VQFNEDLIECVCSFRP 275
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Match: A0A7S2UWG9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWG9_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 4.190e-16 Identity = 58/164 (35.37%), Postives = 94/164 (57.32%), Query Frame = 1
Query: 1 LDEHQRQHEKKMQKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILAVVPDAVFAFSAATGAVWFASTSAAAHFGLGQSAVESASFFDLMTADCSKRLRALIAKAGKSKPHAESVL-FQERMTVCF-SRDDKRLLGELSGRLSRISTGEEAMTCIVCVRP 486
L+EH Q++KKM KRAANR SAQLSRKR+K F+++L+ +N L R+ IL +PD VF+F A +G F S S + + + S + S + L+T K L+ ++ K + K E +R+ +CF ++ ++ GE+ G + S ++ + C+ RP
Sbjct: 114 LEEHVEQYKKKMVKRAANRKSAQLSRKRKKAFIDELRSENQVLRRYQHILESIPDLVFSFDAKSGCFCFVSKSVSNYLQIPVSRLLETSVYQLVTGGSGKNLKKILQKTLEGKSDEEERCDLPKRLELCFQTKYMTKIWGEVDGVIHFGS--KDKVECVCTFRP 275
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Match: B8CC03_THAPS (PAS domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC03_THAPS) HSP 1 Score: 77.4 bits (189), Expect = 1.660e-13 Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 25 EKKMQKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILAVVPDAVFAFSAATGAVWFASTSAAAHFGLGQSAVESASFFDLMTADCSKRLRALI--AKAGKSKPHAESVLFQERMTVCFSRDDKRLL-GELSGRLSRISTGEEAMTCIVCVRP 486
+KK KRAANR+SA LSRKR+K+FL+DL +N +L R +IL +PD + AF A +G + F S S + + +E SF+D +T D K +++ A A K P +S++ ++ DK G+L + E++ C+ +RP
Sbjct: 291 DKKQVKRAANRLSASLSRKRKKMFLDDLTHENTELRRKEQILRAIPDLIVAFDA-SGTISFVSESVSRFLNYNTNELEDTSFWDCLTEDSVKMIKSAFMDALAVKRSPSEDSLVLANGDSLLVKLVDKHSQDGKLVSLKGVVHFTEDSPECVCSIRP 446
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Match: A0A7S2YS82_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YS82_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 7.800e-13 Identity = 59/168 (35.12%), Postives = 90/168 (53.57%), Query Frame = 1
Query: 1 LDEHQRQHEKKMQKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILAVVPDAVFAFSAATGAVWFASTSAAAHFGLGQSAVESASFFDLMTADCSKRLRALIAKA-GKSKPHAESV-----LFQERMTVCFSRDDKRLLGELSGRLSRISTGEEAMTCIVCVRP 486
LD+ +KK QKRAANR SAQLSRKR+K F+E+LKD+N +L R +IL +PD V F + TG +WF S S + S +E SF++ + D ++L+A + + H ++V L+ R+ +D + L+G + E C+ C+RP
Sbjct: 279 LDDSLHPEDKKEQKRAANRRSAQLSRKRKKQFIEELKDENDELRRKEQILKSIPDLVVVFDS-TGKLWFVSQSISRFIQYEASELEGRSFWERLCPDSVRQLKAAFMDSLAARESHTDTVPLGAGLWDLRL---LDKDGTPVTVTLNGV---VHFAGERPECVCCIRP 439
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Match: A0A1Z5JY34_FISSO (PAS domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JY34_FISSO) HSP 1 Score: 68.2 bits (165), Expect = 7.830e-11 Identity = 58/163 (35.58%), Postives = 82/163 (50.31%), Query Frame = 1
Query: 28 KKMQKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILAVVPDAVFAFSAATGAVWFASTSAAAHFGLGQSAVESASFFDLMTADCSKRLRA-----LIAKAGKSKPHAESVLFQERMTVCFSRDDKRLLGELSGRLSRISTGEEAMTCIVCVRPLGYAR 501
KK KRAANR SAQLSRKR+K F+E+LK++N L R +IL +PD V F + +G +WF S S S +E SF+D ++ + + L+A L A+ S E V S +KR+ L+G + E C+ +RPL R
Sbjct: 32 KKQMKRAANRKSAQLSRKRKKQFIEELKEENDGLRRKEQILRSIPDLVVVFDS-SGKLWFVSESVERFLSFTASELEGTSFWDRLSPESVRILKAAFMDSLAAREDVSDTVQLGTGVWELELVDKSNTNKRV--SLNGV---VHFAGERPECVCSIRPLDNLR 188
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Match: A0A7S2LIX0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LIX0_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.400e-10 Identity = 45/112 (40.18%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 25 EKKMQKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILAVVPDAVFAFSAATGAVWFASTSAAAHFGLGQSAVESASFFDLMTADCSKRLRALI--AKAGKSKPHAES 354
+KK KRAANR+SA +SRKR+K+F+EDLKD+N +L R IL +PD + F + +G++ F S SA+ +E+ SF+D +T D + +++ A A K KP ++
Sbjct: 270 DKKYAKRAANRLSAHMSRKRKKMFVEDLKDENMELRRKEMILRSIPDLIVVFDS-SGSMSFVSQSASRFLNYTSCELENTSFWDRLTEDSVRLIKSAFMDALAVKRKPEDDT 380 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16020.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16020.1.1 >prot_P-wetherbeei_contig16020.1.1 ID=prot_P-wetherbeei_contig16020.1.1|Name=mRNA_P-wetherbeei_contig16020.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp LDEHQRQHEKKMQKRAANRMSAQLSRKRRKVFLEDLKDQNADLLRHHEILback to top mRNA from alignment at P-wetherbeei_contig16020:555..1058- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16020.1.1 ID=mRNA_P-wetherbeei_contig16020.1.1|Name=mRNA_P-wetherbeei_contig16020.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig16020:555..1058- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16020:555..1058- >mRNA_P-wetherbeei_contig16020.1.1 ID=mRNA_P-wetherbeei_contig16020.1.1|Name=mRNA_P-wetherbeei_contig16020.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig16020:555..1058- (Phaeothamnion wetherbeei SAG_119_79)back to top |