mRNA_P-wetherbeei_contig1600.3.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Match: A0A835YM93_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM93_9STRA) HSP 1 Score: 356 bits (914), Expect = 3.560e-110 Identity = 221/501 (44.11%), Postives = 292/501 (58.28%), Query Frame = 2
Query: 197 GKIYFGPYEVTKTLGRGMQAKVKLARDTETNELVALKVVDVSGIGPRHLLHIQREVTALRRIQHPNVLRLQDVVEGALLPRGKDMADKDVMVMVLDLAAGGELFEFMLYTGFFPEVIARTYMVQLVSALAHCHRLGIYHRDIKPENILLDANFQLKLADFGLSGTVKADGSDVCMTYCGTRAYMAPEVLSDVGSYGGAKADVWSAAVVLFIMLAGSPPMRLANSSDWWFKAIMLGLHDKFWQAHERVCPHFPRSAQPTLNRMFVADPAKRASVEELLADDPWMAKERMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVELNSKRRNQVYDAFERDVKRAAPLKLSAADAAAGSSLR---LPPPAHVLGADE-----GEA-GSGPAAYAVIYLMGAMPEELLGRVASACAAAGAKAVKVKADAWVVKATFPSDDPTALDPTPRAQMVFRFFALQQAVDPADATAGVHLLTYVVPERVAGDVFAAREVVCDLCARLGDAV 1672
G++ GPYEV +TLG GMQAKV LA++ E+ E VALKV+D + R+ I RE+ ALR + HP+VLRL+DVV A LP +D V+V +L GGELF+ MLY G FPE +ARTY VQL A++ CH G+YHRD+KP+NILLDANFQLK+ADFGLS + A G+D+C TYCGTR+YMAPE+L+ +Y G KAD WS V+LFI+LAGSPP+R A DWWFKA++L DKFWQAHE++ P FPRSAQ ++R+ VA+PA+RA V+EL+ DDPW+ M+ L +R +DAF D +R+A L PP E G+A G+ P+ + V+ G P LL R+ +ACAAAGA +V KAD W ++A F + A M+ R AL+ + A + +V+ ER AGD FAAR + + A L A+
Sbjct: 101 GRLCLGPYEVRRTLGAGMQAKVVLAKNVESGEYVALKVIDKHNLSLRYQEQINREIVALRSVSHPHVLRLRDVVYEARLPSSDPAQSRDSCVLVTELCTGGELFDLMLYLGGFPEPVARTYFVQLAGAISACHAAGVYHRDLKPQNILLDANFQLKVADFGLSA-LHAAGNDLCYTYCGTRSYMAPEILAGA-AYSGGKADAWSVGVLLFILLAGSPPLRSATVDDWWFKALLLRRADKFWQAHEQMTPAFPRSAQGIVSRLLVAEPAERAHVDELV-DDPWLRGALMSPEALRLEVMDRRERAAEAQKAAEAAALARREAALR-QRCEGGFDAFAADTRRSAXXXXXXXXXXXXXXXXXXALAPPLDTWRQREDVRVYGDAFGARPSGFYVLE-EGCAP--LLDRLRAACAAAGASSVS-KADTWTLRAVFQGEAAAPAGAAAPA-MLRRQTALELQLALYTAQLDGREVAFVLAERRAGDAFAARAALRAVAAALPSAI 592
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Match: D7G6D0_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6D0_ECTSI) HSP 1 Score: 314 bits (805), Expect = 8.740e-96 Identity = 157/279 (56.27%), Postives = 208/279 (74.55%), Query Frame = 2
Query: 212 GPYEVTKTLGRGMQAKVKLARDTETNELVALKVVDVSGIGPRHLLHIQREVTALRRIQHPNVLRLQDVVEGALLPRGKDMADKDVMVMVLDLAAGGELFEFMLYTGFFPEVIARTYMVQLVSALAHCHRLGIYHRDIKPENILLDANFQLKLADFGLSGTVKADGSDVCMTYCGTRAYMAPEVLSDVGSYGGAKADVWSAAVVLFIMLAGSPPMRLANSSDWWFKAIMLGLHDKFWQAHERVCPHFPRSAQPTLNRMFVADPAKRASVEELLADDPWMA 1048
G Y++ +TLG+GM KVKL D T E VA+K++ + R ++RE+T+++ + HPNVLRL+DV E + K+ +K+V+++VL+LA GGELF+FM+YTG FPEVIARTY Q++SAL CH GI HRDIKPENILLD NFQL++ADFGLS ++ D + VC T CGTR+YMAPEVL+ Y GA+AD+WSA VVLFIMLAG+PP ++A S+DWWF+A+ G HD+FW AH R CP FP AQ LNR+FVADP +RA++EEL + + W+A
Sbjct: 15 GNYQLHRTLGKGMSGKVKLGVDLRTGETVAVKIMYKDNMSARAAQQLRREITSMKALDHPNVLRLKDVHESLTYVK-KNGLEKEVVILVLELAVGGELFDFMMYTGAFPEVIARTYFCQMLSALEMCHSTGIAHRDIKPENILLDNNFQLRMADFGLS-SIMEDENGVCYTECGTRSYMAPEVLAKQ-PYDGAQADLWSAGVVLFIMLAGNPPFQMAVSTDWWFRAVSSGRHDRFWAAHLRGCPDFPPLAQAFLNRIFVADPLQRATLEELKSHE-WLA 289
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Match: A0A2P4YAF8_9STRA (CBL-interacting serine/threonine-protein kinase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAF8_9STRA) HSP 1 Score: 270 bits (690), Expect = 8.810e-82 Identity = 143/271 (52.77%), Postives = 186/271 (68.63%), Query Frame = 2
Query: 218 YEVTKTLGRGMQAKVKLARDTETNELVALKVVDVSGIGPRHLLHIQREVTALRRIQHPNVLRLQDVVEGALLPRGKDMADKDVMVMVLDLAAGGELFEFMLYTGFFPEVIARTYMVQLVSALAHCHRLGIYHRDIKPENILLDANFQLKLADFGLSGTVK-ADGSDVCM-TYCGTRAYMAPEVLSDVGSYGGAKADVWSAAVVLFIMLAGSPPMRLANSSDWWFKAIMLGLHDKFWQAHERVCPHFPRSAQPTLNRMFVADPAKRASVEEL 1024
Y+V +TLG G+Q KVKL DT T+E VALKV+D++ + + ++++ REV A+ R+ HPNVLRL V + P+ KD + K V+V+VL+LA GGELF+FM+YTG F E IAR Y QLV+ L CH G+YHRDIKPEN+LLD NF LK+ADFGLSG + ADG+ + T CGTR YM+PEVLS + Y G ADVWSA VVLFIMLAG PP ++A + DWWF+A H+ FW AH R P A + R+F P +R ++ E+
Sbjct: 23 YQVLQTLGSGLQGKVKLGVDTATHERVALKVIDMAKLNRKAMINVYREVEAMSRVSHPNVLRLLSVHDDVPYPK-KDGSSKQVIVIVLELATGGELFDFMMYTGCFSENIARAYFQQLVAGLEACHAQGVYHRDIKPENLLLDENFALKIADFGLSGLREGADGAVAELYTQCGTRGYMSPEVLSCL-PYEGEPADVWSAGVVLFIMLAGFPPFQIATNQDWWFRACAAKQHEAFWAAHARSATFSP-GAMSLMTRIFNVKPQERMTLAEI 290
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Match: A0A7S2UW55_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW55_9STRA) HSP 1 Score: 275 bits (702), Expect = 4.790e-81 Identity = 137/284 (48.24%), Postives = 190/284 (66.90%), Query Frame = 2
Query: 212 GPYEVTKTLGRGMQAKVKLARDTETNELVALKVVDVSGIGPRHLLHIQREVTALRRIQHPNVLRLQDVVEGALLPRGKDMADKDVMVMVLDLAAGGELFEFMLYTGFFPEVIARTYMVQLVSALAHCHRLGIYHRDIKPENILLDANFQLKLADFGLSGTVKADGSDVCMTYCGTRAYMAPEVLSDVGSYGGAKADVWSAAVVLFIMLAGSPPMRLANSSDWWFKAIMLGLHDKFWQAHERVCPHFPRSAQPTLNRMFVADPAKRASVEELLADDPWMAKERMT 1063
G Y + +TLG GM KVKLA++ T E+VALK++ S + R ++ E+ A++ + HPNVL L+DV E A P+ K+ +K V+++VL++A+ GELF+++++TG F E +ARTY Q++SAL CHR GI HRDIKPEN+ LD +FQLK+ADFGLS + T CGTR+YMAPE+L + Y G KAD+WSA VVLFIM+ G PP ++A DWWF I H++FWQAH R P+FP AQ LN +F A P R ++E + + PWM+ +T
Sbjct: 16 GQYTIGRTLGSGMSGKVKLAKNNTTGEVVALKLIQRSTLNERSRQNLVNEINAMKAVNHPNVLNLKDVEEDAQYPK-KNGTNKQVVMLVLEIASNGELFDYLMHTGPFSEAVARTYFSQMISALEECHRQGIAHRDIKPENLFLDDSFQLKVADFGLSAMT----DHLLKTECGTRSYMAPEILGNQ-RYDGKKADIWSAGVVLFIMMTGHPPFQIALPQDWWFNEIQHRRHERFWQAHLRTTPNFPPEAQSFLNTIFTASPDDRTTIEGMKSH-PWMSGPILT 292
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Match: A0A835YYP7_9STRA (Serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYP7_9STRA) HSP 1 Score: 273 bits (699), Expect = 2.030e-80 Identity = 132/267 (49.44%), Postives = 182/267 (68.16%), Query Frame = 2
Query: 248 MQAKVKLARDTETNELVALKVVDVSGIGPRHLLHIQREVTALRRIQHPNVLRLQDVVEGALLPRGKDMADKDVMVMVLDLAAGGELFEFMLYTGFFPEVIARTYMVQLVSALAHCHRLGIYHRDIKPENILLDANFQLKLADFGLSGTVKA-DGSDVCMTYCGTRAYMAPEVLSDVGSYGGAKADVWSAAVVLFIMLAGSPPMRLANSSDWWFKAIMLGLHDKFWQAHERVCPHFPRSAQPTLNRMFVADPAKRASVEELLADDPWM 1045
M KVKL RD + N LVA+K++ + + R H+QREV A+ ++QHPN+++L+D K+ + V +VL+LA GELFEF+++TG FP+ +ART QL SA+ CH G+ HRD+KPEN+LLD FQLK+ADFGL+ + + D +C+T CGTR+YMAPEVL+ +Y KADVWSA VVLFIM+AG+PP A+S+DWW+ A G +D+FW AH R CP FP AQ LN++FV DP KR + E++ + PW+
Sbjct: 1 MSGKVKLGRDPKDNSLVAIKLIYLDTMSARAAQHLQREVQAMMKLQHPNIMQLKDFYNTVYTK--KNGQQRQVAALVLELAEAGELFEFVMHTGSFPDPLARTLFSQLTSAMVQCHANGVSHRDLKPENVLLDGRFQLKVADFGLAAVMDSTDSGAMCVTKCGTRSYMAPEVLAGRRAYDPTKADVWSAGVVLFIMIAGNPPFEEASSTDWWYLACRCGRYDRFWAAHLRTCPDFPTLAQDLLNKIFVEDPTKRPTFEQI-REHPWL 264
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Match: A0A225VDZ5_9STRA (CAMK protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VDZ5_9STRA) HSP 1 Score: 271 bits (694), Expect = 6.360e-80 Identity = 142/277 (51.26%), Postives = 191/277 (68.95%), Query Frame = 2
Query: 218 YEVTKTLGRGMQAKVKLARDTETNELVALKVVDVSGIGPRHLLHIQREVTALRRIQHPNVLRLQDVVEGALLPRGKDMADKDVMVMVLDLAAGGELFEFMLYTGFFPEVIARTYMVQLVSALAHCHRLGIYHRDIKPENILLDANFQLKLADFGLSGTVK-ADGSDVCM-TYCGTRAYMAPEVLSDVGSYGGAKADVWSAAVVLFIMLAGSPPMRLANSSDWWFKAIMLGLHDKFWQAHERVCPHFPRSAQPTLNRMFVADPAKRASVEELLADDPW 1042
Y+V +TLG G+Q KVKL D+ T++ VALK++D++ + + ++++ REV A+ R+ H NVLRL V + P+ KD + K V+V+VL+LA GGELF+FM+YTG F E IAR Y QLV+ L CH G+YHRDIKPEN+L+D NF LK+ADFGLSG + ADG+ + T CGTR YM+PEVLS + Y G ADVWSA VVLFIMLAG PP ++A S DWWF+A H+ FW AH R P A ++R+F+A P +R ++ E+ + PW
Sbjct: 35 YQVLQTLGSGLQGKVKLGEDSVTHQRVALKIIDMAKLNRKAMINVYREVEAMSRVSHANVLRLLSVHDDVSYPK-KDGSSKQVIVIVLELATGGELFDFMMYTGSFAENIARAYFQQLVAGLEACHAQGVYHRDIKPENLLMDENFVLKIADFGLSGLREGADGAVAELYTQCGTRGYMSPEVLSCL-PYEGEPADVWSAGVVLFIMLAGFPPFQIATSQDWWFRACAAKQHEAFWAAHARSATFSP-GAMSLMSRIFIAKPQERVTLAEI-KNHPW 307
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Match: A0A4D9CWE3_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWE3_9STRA) HSP 1 Score: 279 bits (713), Expect = 1.110e-78 Identity = 142/284 (50.00%), Postives = 195/284 (68.66%), Query Frame = 2
Query: 212 GPYEVTKTLGRGMQAKVKLARDTETNELVALKVVDVSGIGPRHLLHIQREVTALRRIQHPNVLRLQDVVEGALLPRGKDMADKDVMVMVLDLAAGGELFEFMLYTGFFPEVIARTYMVQLVSALAHCHRLGIYHRDIKPENILLDANFQLKLADFGLSGTVKADGSDVCMTYCGTRAYMAPEVLSDVGSYGGAKADVWSAAVVLFIMLAGSPPMRLANSSDWWFKAIMLGLHDKFWQAHERVCPHFPRSAQPTLNRMFVADPAKRASVEELLADDPWMAKERMT 1063
G YE+ +TLG+GM KVK AR T + VALK++D S R LL ++ E+TAL+ ++HPNVL L V A+ + K+ + + L LAAGGELF+FM+YTG+F EV+ART QLV A+ +CH IYHRDIKPEN+LLD+NFQLK+ADFGL+ +++D DV T CGTR+YMAPE+L G Y G K DVWS VVLFI+LAG+PP ++A DWWF A++ ++FW+AH + PHFP +AQ L+ +F P++R + E++L + W+A +T
Sbjct: 319 GQYEILETLGKGMSGKVKKARHILTGQEVALKIIDKSKAVKRTLLQLRTEITALKTVRHPNVLELLHVELDAIYVK-KNGTKVPSIALALQLAAGGELFDFMMYTGYFREVVARTLFRQLVGAMQYCHDRNIYHRDIKPENLLLDSNFQLKIADFGLAA-IRSDPLDVLRTECGTRSYMAPEILQHEG-YEGEKVDVWSMGVVLFILLAGNPPFQMARRGDWWFNALLENDWERFWKAHLKYAPHFPPAAQTFLSSLFQPIPSRRPNTEQVLHSE-WLAGPCLT 598
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Match: M4BN03_HYAAE (Protein kinase domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN03_HYAAE) HSP 1 Score: 268 bits (685), Expect = 3.090e-78 Identity = 187/497 (37.63%), Postives = 259/497 (52.11%), Query Frame = 2
Query: 218 YEVTKTLGRGMQAKVKLARDTETNELVALKVVDVSGIGPRHLLHIQREVTALRRIQHPNVLRLQDVVEGALLPRGKDMADKDVMVMVLDLAAGGELFEFMLYTGFFPEVIARTYMVQLVSALAHCHRLGIYHRDIKPENILLDANFQLKLADFGLSGTV-KADGSDVCM-TYCGTRAYMAPEVLSDVGSYGGAKADVWSAAVVLFIMLAGSPPMRLANSSDWWFKAIMLGLHDKFWQAHERVCPHFPRSAQPTLNRMFVADPAKRASVEELLADDPWMAKERMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVELNSKRRNQVYDAFERDVKRAAPLKLSAADAAAGSSLRLPPPAHVLGADEGEAGSGPAAYAVIYLM---GAMPEELLGRVASACAAAGAKAVKVKADAWVVKATFPSDDPTALDPTPRAQMVFRFFALQQAVDPADATAGVHLLTYVVPERVAGDVFAAREVVCDLCARLGDAVCVGEEES 1693
Y+V +TLG G+Q KVKL DT T + VALK++D + + + L+++ REV A+ R+ H NVLRL V + + P+ + K V+V+VL+LAAGGELF+FM+YTG F E IAR Y QL++ L CH G+YHRDIKPEN+LLDANF LK+ADFGLSG +ADG+ V + T CGTR YM+PEVLS + SY G DVW+A VVLFIMLAG PP ++A DWWF+A +D FW AH R P A + R+F +P +R ++ E+ A W KE + +++++ +D F+ +V+R+ L + + G R P S PA+ +Y EL RV A A+ V V D + K T P+D A D R F+L A AG HL+ + R G+ +E L L D + V ++E+
Sbjct: 37 YQVLQTLGSGLQGKVKLGVDTRTKQRVALKLLDAAKMHHKALINVYREVEAMSRVLHTNVLRLLSVHDSLVYPKRDGSSSKQVIVIVLELAAGGELFDFMMYTGCFSESIARAYFQQLIAGLEACHAQGVYHRDIKPENLLLDANFVLKIADFGLSGLKERADGAVVELYTQCGTRGYMSPEVLSCL-SYEGEPVDVWAAGVVLFIMLAGFPPFQIATEQDWWFRACATKQYDAFWAAHARSGTFSP-GAMSLMTRIFNVNPHERITIAEIKAH-AWF-KESIVVSEDLRTELLSRKRQVEKEKHKEREEKMRTAATKRLQQQDEKFDPFDVNVERSMTLPTATVFMSLGEGARKAP-------------SYPASSVALYTSFRSSRTATELQMRVEKALREQSARFV-VHKDRFKTKVTMPTD---AGD----VGFAVRIFSLDNA-------AGQHLVEF---RRANGECIKFQEAYKKLSNSLSDLIWVKDDEA 498
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Match: A0A7S2WUS7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUS7_9STRA) HSP 1 Score: 266 bits (681), Expect = 3.250e-78 Identity = 139/266 (52.26%), Postives = 183/266 (68.80%), Query Frame = 2
Query: 248 MQAKVKLARDTETNELVALKVVDVSGIGPRHLLHIQREVTALRRIQHPNVLRLQDVVEGALLPRGKDMADKDVMVMVLDLAAGGELFEFMLYTGFFPEVIARTYMVQLVSALAHCHRLGIYHRDIKPENILLDANFQLKLADFGLSGTVKADGSDVCMTYCGTRAYMAPEVLSDVGSYGGAKADVWSAAVVLFIMLAGSPPMRLANSSDWWFKAIMLGLHDKFWQAHERVCPHFPRSAQPTLNRMFVADPAKRASVEELLADDPWM 1045
M AKVKL + E VALK++D + + PR ++RE+ A++ +QHPN L L+ V A P+ K ++V+++VL+L GGELF++++YTG E +AR+Y QL+SAL CH G+YHRD+KPEN+LLD +FQLKLADFGL+ + D +C T CGTR+YMAPEV+S Y GAKAD+WSA VVLFIMLAG+PP A +DWWF AI +DKFW AH R P FP+ AQ LNR+FVAD RA++EEL PW+
Sbjct: 1 MSAKVKLGTHITSGEQVALKLIDRTKLTPRQTEMLEREIQAMQAVQHPNTLLLRHVEWVAQYPK-KRGGFREVVLLVLELGTGGELFDYLMYTGPLGEQVARSYFRQLLSALEVCHSQGVYHRDLKPENLLLDGSFQLKLADFGLAA-INCD-DHLCATECGTRSYMAPEVMSRQ-PYDGAKADIWSAGVVLFIMLAGNPPFAQAGGNDWWFTAIRHNRYDKFWMAHLRSAPDFPKLAQEFLNRIFVADSGNRATIEELW-QHPWL 261
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Match: W2L4W4_PHYPR (CAMK protein kinase, variant n=10 Tax=Phytophthora TaxID=4783 RepID=W2L4W4_PHYPR) HSP 1 Score: 266 bits (679), Expect = 3.460e-78 Identity = 150/313 (47.92%), Postives = 194/313 (61.98%), Query Frame = 2
Query: 119 LQAEAAAVRRMDWHASPLARRFVIH-NGKIYFGPYEVTKTLGRGMQAKVKLARDTETNELVALKVVDVSGIGPRHLLHIQREVTALRRIQHPNVLRLQDVVEGALLPRGKDMADKDVMVMVLDLAAGGELFEFMLYTGFFPEVIARTYMVQLVSALAHCHRLGIYHRDIKPENILLDANFQLKLADFGLSGTVKADGSDVCM----TYCGTRAYMAPEVLSDVGSYGGAKADVWSAAVVLFIMLAGSPPMRLANSSDWWFKAIMLGLHDKFWQAHERVCPHFPRSAQPTLNRMFVADPAKRASVEELLADDPW 1042
A A V MD P ++ + N Y+V +TLG G+Q KVKL DT T++ VALKV+D++ + + ++++ REV A+ R+ H NVLRL V + P+ KD K V+V+VL+LA GGELF+FM+YTG F E IAR Y QLV+ L CH G+YHRDIKPEN+LLD F LK+ADFGLSG +G+D M T CGTR YM+PEVLS + Y G ADVWSA VVLFIMLAG PP ++A S DWWF+A H+ FW AH R P A + R+F P +R ++ E+ PW
Sbjct: 6 FSAPVAPVSNMDAAQYPQQQQQAANTNSSRMLAQYQVLQTLGSGLQGKVKLGVDTVTHQRVALKVIDMAKLNRKSMINVYREVEAMSRVSHTNVLRLLSVHDDVPYPK-KDGNVKQVIVIVLELATGGELFDFMMYTGCFAENIARAYFQQLVAGLEACHAQGVYHRDIKPENLLLDETFALKIADFGLSGL--REGADGAMAELYTQCGTRGYMSPEVLSCL-PYEGEPADVWSAGVVLFIMLAGFPPFQIATSQDWWFRACAAKQHEAFWAAHARSATFSP-GAMSLMTRIFHVKPQERITLAEIKTH-PW 312 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1600.3.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1600.3.4 >prot_P-wetherbeei_contig1600.3.4 ID=prot_P-wetherbeei_contig1600.3.4|Name=mRNA_P-wetherbeei_contig1600.3.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=553bp MENRRTDSLQAEAAAVRRMDWHASPLARRFVIHNGKIYFGPYEVTKTLGRback to top mRNA from alignment at P-wetherbeei_contig1600:1935..6911- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1600.3.4 ID=mRNA_P-wetherbeei_contig1600.3.4|Name=mRNA_P-wetherbeei_contig1600.3.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4977bp|location=Sequence derived from alignment at P-wetherbeei_contig1600:1935..6911- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1600:1935..6911- >mRNA_P-wetherbeei_contig1600.3.4 ID=mRNA_P-wetherbeei_contig1600.3.4|Name=mRNA_P-wetherbeei_contig1600.3.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1659bp|location=Sequence derived from alignment at P-wetherbeei_contig1600:1935..6911- (Phaeothamnion wetherbeei SAG_119_79)back to top |