mRNA_P-wetherbeei_contig160.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: D8LBP8_ECTSI (Nudix (Nucleoside diphosphate linked moiety X)-type motif 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP8_ECTSI) HSP 1 Score: 301 bits (771), Expect = 7.120e-94 Identity = 148/265 (55.85%), Postives = 187/265 (70.57%), Query Frame = 2
Query: 173 STGAEKGMPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSS----DITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLASPAAVELIESEHESIVPGRPPFKLYHR 955
+T + G+P PL + + KFNSAT+D+ ++QVEDT DFALKL+AT+ LR GKAALWLKVP DF H+I +AS YG +LHHT P + M +WL E+VP+KVP + THHVGVAGCV+N DEVLLV++ WKFPGGLA+ GE +GEAA REV EETG+ EF+SVL++RHQH+MQFGNSDL+F+CR+ DI C HEIA+A W+P+ + T + ML VA ML P EL S HES +P R P+ LYHR
Sbjct: 72 TTISNVGLPVPLPFEQSKFNSATVDIAKIQVEDTADFALKLFATVDKLRKDGKAALWLKVPTDFCHFISIASHYGFQLHHTQPKYLMMYLWLPEDVPDKVPPYGTHHVGVAGCVMNSQDEVLLVKDKHK--GAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLPEDTGALDINKCNHEIADACWMPLDQFKKQTRHS-MLAVVADMLEKPEEKELTRSLHESAIPDRAPYFLYHR 333
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: A0A836C878_9STRA (Nucleoside diphosphate linked moiety X-type motif 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C878_9STRA) HSP 1 Score: 273 bits (699), Expect = 3.060e-83 Identity = 138/267 (51.69%), Postives = 181/267 (67.79%), Query Frame = 2
Query: 188 KGMPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVAS-FYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSD----------ITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLAS-PAAVELIESEHESIVPGRPPFKLYH 952
+G+P+ Y+EG++NSA+I+ +++ +DT DFA KL AT+ HL+ K+A+WLKVP+D+AHY+PVA+ G R HH PD + MV WL + VP+KVP FATHHVGVAGCV++ VL+V+E P WKFPGGLAE GEDLG AAAREV EETG+ + F +L R QH MQFGNSDL+F+CRM + + + CAHEIAEARW+P+ A +PM+G VA+ML P EL E ESI RPP+K+Y+
Sbjct: 59 EGLPDLFPYKEGQYNSASINAGKVRAQDTADFAAKLSATVAHLQREEKSAVWLKVPMDYAHYLPVAARAAGFRPHHALPDAVLMVRWLLDGVPDKVPPFATHHVGVAGCVLDARGRVLVVKERH--PRALWKFPGGLAEAGEDLGAAAAREVEEETGVRSAFAGLLAFRQQHAMQFGNSDLYFICRMTRRTGEXXXXXXXXQELRPCAHEIAEARWMPLEEF-AAQNTHPMMGVVAKMLMEGPQNHELKEETQESIFGSRPPYKMYY 322
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: A0A4D9D5W2_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5W2_9STRA) HSP 1 Score: 229 bits (583), Expect = 9.990e-67 Identity = 112/271 (41.33%), Postives = 164/271 (60.52%), Query Frame = 2
Query: 167 GFSTGAEKGMPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLAS------PAAVELIESEHESIVPGRPPFKLYHRPL 961
G G + + EPL FN+ +D + ++V DT+DF +L T+Q LR G++++W++V H + V +G + HH P+++ M +WLQ NKVP +ATH VGVAG N EVLLV+E +G WK PGG PGE+ G AA REV EETG+ + F+ +L +RHQH+ FG D++ V R++AL+ ++ C+ EI +ARWVP+ + A +P+L VA + P +++E EH SI+PGRPP+KLYH PL
Sbjct: 15 GGQDGNKTFLGEPLEVTPMPFNAVMLDTDNMRVTDTSDFTTRLLVTVQQLRREGRSSMWVRVHALNGHLLGVLGTFGFKCHHCEPESVIMNLWLQPGKENKVPPYATHLVGVAGFCQNKKGEVLLVKEGSKNLSG-WKLPGGYINPGEEFGAAAVREVEEETGVRSSFEGLLALRHQHQQSFGVDDIYVVTRLQALTDELRLCSSEIQDARWVPLKQFQD-EASHPILRTVAELTRGWGQGEGPVRGDIVEREHPSILPGRPPYKLYHAPL 283
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: K8Z7W9_NANGC (Nucleoside diphosphate-linked moiety x motif 6 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z7W9_NANGC) HSP 1 Score: 227 bits (579), Expect = 6.500e-65 Identity = 120/292 (41.10%), Postives = 173/292 (59.25%), Query Frame = 2
Query: 122 STGTRLLQTSHPCRRGFST--GAEKG----MPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLAS------PAAVELIESEHESIVPGRPPFKLYHRPL 961
+T TR + P RR FS G + G + EPL FN+ +D + ++V DT+DF +L T+Q LR G++++W++V H + V +G + HH P+++ M +WLQ NKVP +ATH VGVAG N EVLLV+E +G WK PGG PGE+ G AA REV EETG+ + F+ +L +RHQH+ FG D++ V R++AL+ ++ C+ EI +ARWVP+ + A +P+L VA + P ++E EH SI+PGRPP+KLYH PL
Sbjct: 91 ATITRYMAGMQP-RRAFSGQGGGQDGNKTFLGEPLEVTPMPFNAVMLDTDNMRVTDTSDFTTRLLVTVQQLRREGRSSMWVRVHALNGHLLGVLGTFGFKCHHCEPESVIMNLWLQPGKENKVPPYATHLVGVAGFCQNKKGEVLLVKEGSKNLSG-WKLPGGYINPGEEFGAAAVREVEEETGVRSSFEGLLALRHQHQQSFGVDDIYVVTRLQALTDELRLCSSEIQDARWVPLKQFQD-EASHPILRTVAELTRGWGEGEGPVRGVIVEREHPSILPGRPPYKLYHAPL 379
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: A0A7S2MDL7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDL7_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.510e-58 Identity = 104/235 (44.26%), Postives = 145/235 (61.70%), Query Frame = 2
Query: 269 DTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADE-------VLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLASPAAVELIESEHESIVPGRPPFKLYH 952
DT+DF + L ++++ GK A WL VPLDFAHYI VA+ G R HH DT MV+W++ N P+++P FATH VGV G VV + VL++REA ++K PGGL + ED G+AA REVREETG+ AEF +LT+RHQH MQFG SD++ + +RA S D+ +E+ +ARW+ ++ R + + + AV L E E +S+VPGR P+KLY+
Sbjct: 1 DTSDFGMSLVSSLKAFNSAGKLATWLVVPLDFAHYISVAALSGFRFHHAEGDTATMVLWMRPNEPSRIPPFATHQVGVGGLVVRGGPDDNPEDPHVLVIREAGRNYT-NFKLPGGLCDVAEDFGDAAVREVREETGVEAEFSRILTMRHQHGMQFGRSDIYCIALLRATSVDVAIDTNELEDARWMKLSEFRENSPHEMVEHAIQAATGEGGAVGLQEKELKSVVPGRVPYKLYY 234
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: A0A835YXX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX9_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.190e-55 Identity = 121/298 (40.60%), Postives = 161/298 (54.03%), Query Frame = 2
Query: 128 GTRLLQTSHPCRRGFSTGAEKGMPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREA------RTLPAGSWKFPGGLAEPGEDLGEAAAREV-----REETGITAEFQSVLTIRHQHKMQFGNSD-LFFVCRMRALSSDITACAHEIAE-------ARWVPMAHLRG-ATADNPMLGKVARMLASPAA-VELIESEHESIVPGRPPFKL-YHR 955
G RL+ +S P GMP+P Y EG++NSAT++ ++ EDT DFA L+ATI HLR K ALWL+VP+DFAHY+P+A YG + HHT + + MV+WL+ +V N++P FATHHV V+ V N VL+VR S+ FPGGLAE GEDL +AAAR V R G F+ VL +R H G + L F+C + A A+WVP++ LR A + + VA++L A E+ H S VPGRPP+ L YHR
Sbjct: 52 GARLMSSSIPTM--------TGMPDPFPYEEGRYNSATVNAGKVYAEDTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAGGAGALHFLCHLTAAXXXXXXXXXXXXXXXXXXXXAQWVPVSALREQGEAGDVVAAAVAQLLEGGAERSEMAAEVHASAVPGRPPYTLFYHR 341
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: A0A6P5M2G6_PHACI (Nucleoside diphosphate-linked moiety X motif 6 n=3 Tax=Phascolarctos cinereus TaxID=38626 RepID=A0A6P5M2G6_PHACI) HSP 1 Score: 187 bits (474), Expect = 2.130e-50 Identity = 109/278 (39.21%), Postives = 154/278 (55.40%), Query Frame = 2
Query: 164 RGFSTGAEKGMPEPLHYREGKFNSATIDVNELQVEDTTD---FALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQ--FGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLASP-----AAVELIESEHESIVPGRPPFKLYHRPLAD 967
R S+ G P L +F T+ + +LQ D+ D F L A+IQ R G+ A+WL VP+ + +I A+ GLR HH D M +WL E P+++P +ATH VGVAG V ++ +LV + R +WKFPGGL+EPGED+G+ A REV EETGI +EF+S+L+IR QH FG SD++ +CR+R LS I+ C HE + W+ + L P+ KVA +L V++ E S+ G +KLYHR L +
Sbjct: 43 RALSSSPSPG-PGGLRGEVDRFGGVTVRLGQLQPADSVDPATFRTWLQASIQQWRAEGRIAVWLHVPIFHSQFISPAASLGLRFHHAEADASLMTLWLGEG-PSRLPGYATHQVGVAGAVFDEDTGKVLVVQDRNKMKNAWKFPGGLSEPGEDIGDTAIREVLEETGIKSEFKSLLSIRQQHGAPNAFGKSDMYIICRLRPLSFHISFCPHECLKCEWMNLTDLAQTDDTTPITHKVANLLLYGHREGFEKVDIAMQELPSVYVGLF-YKLYHRELPE 317
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: UPI00142569A1 (nucleoside diphosphate-linked moiety X motif 6-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142569A1) HSP 1 Score: 182 bits (463), Expect = 1.820e-49 Identity = 86/202 (42.57%), Postives = 131/202 (64.85%), Query Frame = 2
Query: 200 EPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSDITACAHEIAEARWV 805
E + ++ ++N I++ E + + F +L +++ G +WLK+ ++ A +I VA+ +G HH D + M+ WL + PN++P + TH+VGVAG VVN+ ++VL+V+E R +WK PGG+A+PGEDLG A REV EETGI AEF S+L R QH +FG SDL+FVC M+AL+S+I +C HEI++ W+
Sbjct: 2 ETFNGKKDQYNGIIINIKEHKCDSEKIFNDRLKRSLEEWNTSGIRGVWLKIAIECAAFIAVAAKHGFVFHHAQTDYVMMIKWLPTDEPNQLPGYTTHYVGVAGFVVNENNQVLVVKE-RFYKKANWKLPGGMADPGEDLGVTAKREVFEETGIEAEFISLLAFRQQHGFRFGQSDLYFVCEMKALNSEIASCQHEISDCMWM 202
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: UPI000F555542 (nucleoside diphosphate-linked moiety X motif 6-like n=2 Tax=Pocilloporidae TaxID=46729 RepID=UPI000F555542) HSP 1 Score: 182 bits (462), Expect = 5.300e-49 Identity = 106/266 (39.85%), Postives = 157/266 (59.02%), Query Frame = 2
Query: 206 LHYREGKFNSATIDVNELQVEDTT-DFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVN-DADEVLLVREARTLPAGS------WKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQ--FGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLASPA------AVELIESEHESIVPGRPPFKLYHR 955
LH+ E FN T+++++L + + +F++KL +IQ R K ++W+KVP+ ++ IPVA +G HH D ++ WL + NKVP +ATH VGV+G V+N + +EVL+V++ L G WKFPGGL++ GE + E A REV EETGI AEF+S+L R QHKM+ F SD++ VCRM LS I+ C EIA+ +W+ ++ L T P L K+A LA +V+++ + S V F L+HR
Sbjct: 31 LHWNEAYFNGVTVNLDQLGEQCSPGEFSVKLTRSIQQWRKERKKSVWMKVPIVQSYLIPVAFEHGFSYHHAVGDHAMLLKWLPKKEHNKVPPYATHQVGVSGLVLNREKNEVLVVQDKNLLKIGRRLKRPVWKFPGGLSDEGESIEETAVREVWEETGIRAEFKSILLFRQQHKMKNAFDKSDVYVVCRMEPLSFGISHCEDEIAQCQWMELSTLLTHTDTTP-LTKLAARLAKHGLKNGFESVDIVANSMRSWVNPSQTFSLFHR 295
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: UPI001458116F (nucleoside diphosphate-linked moiety X motif 6-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458116F) HSP 1 Score: 181 bits (460), Expect = 8.420e-49 Identity = 99/255 (38.82%), Postives = 146/255 (57.25%), Query Frame = 2
Query: 224 KFNSATIDVNELQVE-DTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQ--FGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLR-GATADNPMLGKVARMLASPAA-----VELIESEHESIVPGRPPFKLYHRPL 961
+FN T+DV ++ V +F L+ ++Q R + A WLK+P+ + +IP+A+ G + HH + + +W++EN +K P FATH VGVAG V + + +LV + R WKF GGL++ GED+G+ A REV EETG+ EFQSV+++R QH FG SD FFVCRMR LS DI C EI+ +W+ + L G+ + P+ ++ + V+L + ESI G +KLYHRP
Sbjct: 37 RFNGITVDVKQVSVSLPDEEFHSLLHNSLQVWRSKEINAAWLKIPIQYGRFIPIAAKLGFQFHHAEENNCLLKLWMKENGEDKTPRFATHQVGVAGFVFREDTQSVLVVKDRKSKFSYWKFAGGLSDLGEDIGDTAVREVFEETGVKTEFQSVMSVRQQHNQPGAFGRSDFFFVCRMRPLSYDINPCNEEISACQWMNIQELHEGSKSVAPITRRILDLALYGLKEGFHNVDLYAEDMESIYRGLR-YKLYHRPF 290 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig160.4.1 >prot_P-wetherbeei_contig160.4.1 ID=prot_P-wetherbeei_contig160.4.1|Name=mRNA_P-wetherbeei_contig160.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=260bp MPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWback to top mRNA from alignment at P-wetherbeei_contig160:5095..9930- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig160.4.1 ID=mRNA_P-wetherbeei_contig160.4.1|Name=mRNA_P-wetherbeei_contig160.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4836bp|location=Sequence derived from alignment at P-wetherbeei_contig160:5095..9930- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig160:5095..9930- >mRNA_P-wetherbeei_contig160.4.1 ID=mRNA_P-wetherbeei_contig160.4.1|Name=mRNA_P-wetherbeei_contig160.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig160:5095..9930- (Phaeothamnion wetherbeei SAG_119_79)back to top |