mRNA_P-wetherbeei_contig1598.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1598.2.1 vs. uniprot
Match: Q8QNM9_ESV1K (EsV-1-34 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNM9_ESV1K) HSP 1 Score: 223 bits (569), Expect = 2.670e-59 Identity = 276/731 (37.76%), Postives = 405/731 (55.40%), Query Frame = 1
Query: 1 KTVKYAMIISTIIYAIVWKFPVPCYGCDSGGIFYRCINGTGENTRSCEAYTLGEKRVKKATGFISGVVEDAGDFLEELWTFTKEDLPPIVYDFIQRLKELIMTAKAQVTEKMHYAIKYLTEAIPKLVAQAKALIGKGWEEFREVALDPVIAFVLTHIVSPLVAIAEALADFRNLVWGSISDAVGKFANLNLGGFASDVVDLFAQIPASVEWMKENLIKVINLVKNKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAITGVXXXXXXXXXXXXXXMGNXXXXXLNQTIDFTNTALGKIXXXXXXXXXXXXXXXXXXXXXXXXXXSLINDLRDVEIFGKTPFNNYSWWPKISGVSKLSIDPIDAGTIQTVTIQDVSTSGNIGKVTXXXXXXXXXXLVAPAVPNPTDIQKXXXXXXXXXXXXXXXXXXXTVADVDNVLETVVDKIPDGALSALTWIPSKISELKTVIANLFESAMEPVYASLVTIYSAXXXXXXXXXAFFSTYLTLTAIRERISMLFSLGRKLVVEDLVQGIIMGELVPGFISILESIKEPVTEFVGKAAHRLWDFLGLVGNGVSKLFGEVYKAVMKVTTLVAKNVIAVVYYSFGTGVDRLTYFLPVDVTIKIIVMITLIVYILIGDVFGRVWNIFALGKDAVALAL---QAAVYGINKVDHSLDI 2184
K+V Y + +YA+V+K P+PC+GC G +YRC+ TG+ T SC A+ + RV+ A ++++AG +++ LW FTK +LP ++ DFI LK+ ++ K ++ EK++ I +L + I ++ K + +E+F EV ++PVI F + +++ P + + E +FR+L+W +S+AV KFAN+ +G F DVVD+F +IP +++ +K L+ +IN +KN + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX + XX XXXXXXXXXXXXXXXXXX ++ +R+V++ +SW V ++ID ++ TI + NI + + + P DI+ XXXXXXXXXXXXXXXXXXX D + IP +I K+ ++K I +FE+AM P+Y L T+ + FF YLT TAI+ R++ L L + V L++ + + E+VP F+ ++ + +P+ FV A W F+ +G V +F + YK + KVT ++AK V Y GT V+R T F+P+ +++K+++++ I+++ G GK V L+L Q A + +DH LD+
Sbjct: 19 KSVSYVVAGCFCVYALVYKIPIPCFGCQKNGFWYRCVMDTGDGTASCAAHKAAKSRVETA----GRIMDEAGVYMDNLWDFTKTELPGVISDFIATLKDQVLGLKDRMAEKINLIIAFLRDKIELFWSKIKNVAVSTYEKFMEVVINPVIKFFVANLLKPAIVVFEKNMEFRDLIWSVLSNAVDKFANIPIGDFVGDVVDVFQKIPEAMDNLKGLLVMLINKIKNDTIGVVNTGIRESIQGVETSVNFLSGKLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVIKGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVPVNATVGIMEKVRNVKV-PVIKKRIFSWIKTPGKVRDINIDGVELPTIPVEKFGRIKEGLNIPNIPFKNIDIPALDIPTVNIKAPADIKXXXXXXXXXXXXXXXXXXXXXXXXFD------LPSIP-----GFGFITDKVEKVKESIREIFETAMAPLYDGLATLIALVGSIISSAKHFFYNYLTWTAIKSRVTQLMGLAGEGV--SLLKDLFVNEIVPAFMKLIRGMADPILAFVKAATDHTWRFMKKLGANVGSIFNKSYKVITKVTGVIAKGVFHTGLYIIGTTVERYTGFIPLPLSVKLMLIMASIIWMFFGGFLSN-------GKVIVDLSLSVIQGAAVALTDLDHQLDL 724
BLAST of mRNA_P-wetherbeei_contig1598.2.1 vs. uniprot
Match: D8LP69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP69_ECTSI) HSP 1 Score: 221 bits (564), Expect = 1.420e-58 Identity = 301/736 (40.90%), Postives = 431/736 (58.56%), Query Frame = 1
Query: 1 KTVKYAMIISTIIYAIVWKFPVPCYGCDSGGIFYRCINGTGENTRSCEAYTLGEKRVKKATGFISGVVEDAGDFLEELWTFTKEDLPPIVYDFIQRLKELIMTAKAQVTEKMHYAIKYLTEAIPKLVAQAKALIGKGWEEFREVALDPVIAFVLTHIVSPLVAIAEALADFRNLVWGSISDAVGKFANLNLGGFASDVVDLFAQIPASVEWMKENLIKVINLVKNKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAITGVXXXXXXXXXXXXXXMGNXXXXXLNQTIDFTNTALGKIXXXXXXXXXXXXXXXXXXXXXXXXXXSLINDLRDVEI-----FGKTPFNNYSWWPKISGVSKLSIDPIDAGTIQTVTIQDVSTSGNIGKVTXXXXXXXXXXLVAPAVPNPTDIQKXXXXXXXXXXXXXXXXXXXTVADVDNVLETVVDKIPDGALSALTWIPSKISELKTVIANLFESAMEPVYASLVTIYSAXXXXXXXXXAFFSTYLTLTAIRERISMLFSLGRKLVVEDLVQGIIMGELVPGFISILESIKEPVTEFVGKAAHRLWDFLGLVGNGVSKLFGEVYKAVMKVTTLVAKNVIAVVYYSFGTGVDRLTYFLPVDVTIKIIVMITLIVYILIGDVFGRVWNIFALGKDAVALAL---QAAVYGINKVDHSLDI 2184
KTV Y + +YA+V+K P+PC+GC G +YRC+ TG T SC A+ + RV+ A ++++AG +++ LW FTK +LP ++ DFI LK+ I+ K ++ EK++ + +L + + ++ K + +E F +V ++PVI F + +++ P + E + +FR LVW +S+A+ KFAN+ +G F DVVD+F ++P +++ +K ++ +IN +KN++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXX ++ ++ I F K F +W V K+ ID ++ TI + NI + + + P DI++XXXXXXXXXXXXXXXXXXX + IP +I ++ ++K I +FE+AM P+Y L T+ + FF YLT TAI+ R++ L L + V L++ + M E+VP F+ ++ ++ +P+ FV A W F+ +G V +F E Y+ + KVT ++AK V Y GT ++R T +LP+ +++K+++++ I+++ +G GK V LAL Q + + +DH LD+
Sbjct: 19 KTVSYVVAGCFCVYALVYKIPIPCFGCQKDGFWYRCVMDTGHGTASCAAHKAAKNRVETA----GRIMDEAGVYMDNLWDFTKTELPGVISDFIATLKDQILGLKDRMAEKINLILTFLRDKMNLFWSKVKGVAVSTYERFMDVVINPVIKFFVANLLQPATVVFEKIMEFRELVWTVLSNAIDKFANIPIGNFVGDVVDVFQKLPEAMDDLKGFMVMLINKIKNETIGVVNTGIREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNMNRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMKRAKNTHIGYNKGFVKINFRPLNWISAPGEVKKIDIDEVELPTIPVEKFGRIKEDLNIPNIPFDQIDIPALDIPTVNIKAPADIKEXXXXXXXXXXXXXXXXXXXXXXXXX------LPPIP-----GFGFISDRVEKVKESIREIFETAMAPLYDGLATLIALVGSIISSAKHFFYNYLTWTAIKSRVTQLMGLAGEGV--SLLKDLFMDEIVPAFMKLIRAMADPILAFVKTATDHTWRFMKKLGTNVGSIFNESYRVIAKVTGVIAKGVFHTGLYVVGTTIERYTGWLPLPISVKLLLILASIIWMFLGGFLSN-------GKALVDLALSVMQGSAIALTDLDHQLDL 730
BLAST of mRNA_P-wetherbeei_contig1598.2.1 vs. uniprot
Match: A0A835YQJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQJ7_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 5.720e-17 Identity = 48/183 (26.23%), Postives = 96/183 (52.46%), Query Frame = 1
Query: 7 VKYAMIISTIIYAIVWKFPVPCYGCDSGGIFYRCINGTGENTRSCEAYTLGEKRVKKATGFISGVVEDAGDFLEELWTFTKEDLPPIVYDFIQRLKELIMTAKAQVTEKMHYAIKYLTEAIPKLVAQAKALIGKGWEEFREVALDPVIAFVLTHIVSPLVAIAEALADFRNLVWGSISDAVGK 555
V + +++ + Y V +PC GCD GG+FY+C++GTG N+ +CEA+T G K + I + G++ EL F+ LP +Y+F + + I A A+V ++ K + + +++ KA+ W+ + + PV+ + +++ P+ A+ + + F +V +++ +GK
Sbjct: 16 VFFGVLVCALTYLAVNPITLPCVGCDEGGLFYKCMHGTGINSVTCEAWTKGSKGISAVRDEIMTI----GEYSSELVKFSSH-LPQYLYEFAGAMMQHIRNASAEVYARLKDVAKIARQKMLEVLTSLKAIALDTWQTVYDRVIRPVMTALTQYVLQPITALLDKIIKFAKMVIEGVTNVIGK 193
BLAST of mRNA_P-wetherbeei_contig1598.2.1 vs. uniprot
Match: A0A836CDL4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL4_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.650e-16 Identity = 51/172 (29.65%), Postives = 91/172 (52.91%), Query Frame = 1
Query: 10 KYAMIISTIIYAIVWKFPVPCYGCDSGGIFYRCINGTGENTRSCEAYTLGEKRVKKATGFISGVVEDAGDFLEELWTFTKEDLPPIVYDFIQRLKELIMTAKAQVTEKMHYAIKYLTEAIPKLVAQAKALIGKGWEEFREVALDPVIAFVLTHIVSPLVAIAEALADFRNLV 525
+A +++ +I+ V +PC CD+GG+FY+C++GTG + +CEAY G + A G + AG++ EL FT + LP + F +K +MTA A+V +M YL + ++ A + W F + + P+IA ++ +++ P+ +A+ F +LV
Sbjct: 14 SFAALVAALIWLTVRPVTIPCVNCDTGGMFYKCMDGTGAGSVTCEAYRAGNAAIASAR---KGALT-AGEYARELTVFTTK-LPEYLSKFAALIKSKLMTAAAEVYARMISVSAYLKAKVAEIAKAALTPMYDTWAAFHDAVIKPLIAGMIQYVLQPVTKAMDAIVAFVHLV 180
BLAST of mRNA_P-wetherbeei_contig1598.2.1 vs. uniprot
Match: A0A836CHJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHJ1_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 9.230e-15 Identity = 49/166 (29.52%), Postives = 86/166 (51.81%), Query Frame = 1
Query: 28 STIIYAIVWKFPVPCYGCDSGGIFYRCINGTGENTRSCEAYTLGEKRVKKATGFISGVVEDAGDFLEELWTFTKEDLPPIVYDFIQRLKELIMTAKAQVTEKMHYAIKYLTEAIPKLVAQAKALIGKGWEEFREVALDPVIAFVLTHIVSPLVAIAEALADFRNLV 525
+ +I+ V +PC CD+GG+FY+C++GTG + +CEAY G + A G + AG++ EL FT + LP + F +K +MTA A+V +M YL + ++ + W F + + P+IA ++ +++ P+ +A+ F +LV
Sbjct: 411 AALIWLTVRPVTIPCVNCDTGGMFYKCMDGTGAGSVTCEAYRAGNAAIASAR---KGALT-AGEYARELTVFTTK-LPEYLSKFAALIKSKLMTAAAEVYARMISVSAYLKAKVAEIAKATLTPMYDTWAAFHDAVIKPLIAGMIKYVLQPVTKAMDAIIAFVHLV 571
BLAST of mRNA_P-wetherbeei_contig1598.2.1 vs. uniprot
Match: A0A835Z888_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z888_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.810e-14 Identity = 44/185 (23.78%), Postives = 94/185 (50.81%), Query Frame = 1
Query: 13 YAMIISTIIYAIVWKFPVPCYGCDSGGIFYRCINGTGENTRSCEAYTLGEKRVKKATGFISGVVEDAGDFLEELWTFTKEDLPPIVYDFIQRLKELIMTAKAQVTEKMHYAIKYLTEAIPKLVAQAKALIGKGWEEFREVALDPVIAFVLTHIVSPLVAIAEALADFRNLVWGSISDAVGKFANL 567
+ +++ + Y + +PC GCD GG+FY+C+ GTG N+ +CEA+T G K + + + E + EL F+ LP +YDF + + I A A+V ++ + + +++ KA+ W + + PV++ + +++ P+ A+ + + F +V +++ +G+ ++
Sbjct: 19 FGVLVCALAYLAINPITLPCVGCDEGGLFYKCMPGTGLNSVTCEAWTKGAKGMSAVRDQLMSISE----YSSELVKFSSH-LPQYLYDFAGAMLQHIRRASAEVYARLKDVAVIAKQKMLEVLGSLKAIALDTWATVFDRVIKPVMSALTKYVLQPITALLDKIIQFAKMVIDGVTNVIGRAGDI 198
BLAST of mRNA_P-wetherbeei_contig1598.2.1 vs. uniprot
Match: A0A835Z9S6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S6_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 3.650e-14 Identity = 45/185 (24.32%), Postives = 94/185 (50.81%), Query Frame = 1
Query: 13 YAMIISTIIYAIVWKFPVPCYGCDSGGIFYRCINGTGENTRSCEAYTLGEKRVKKATGFISGVVEDAGDFLEELWTFTKEDLPPIVYDFIQRLKELIMTAKAQVTEKMHYAIKYLTEAIPKLVAQAKALIGKGWEEFREVALDPVIAFVLTHIVSPLVAIAEALADFRNLVWGSISDAVGKFANL 567
+ +++ + Y + +PC GCD GG+FY+C+ GTG N+ +CEA+T G K + I V E + EL F+ LP +YDF + + I A A+V ++ + + +++ KA+ W + + PV++ + +++ P+ ++ + + F +V +++ +G+ ++
Sbjct: 19 FGVLVCALAYLAINPITLPCVGCDEGGLFYKCMPGTGLNSVTCEAWTKGAKGMSAVRDQIMSVSE----YSSELVKFSSH-LPQYLYDFAGAMLQHIRRASAEVYARLKDVAVIAKQKMLEVLGSLKAIALDTWATVFDRVVKPVMSALTKYVLQPITSLLDKIIQFAKMVIDGVANVIGRAGDI 198
BLAST of mRNA_P-wetherbeei_contig1598.2.1 vs. uniprot
Match: A0A836CG10_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG10_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 5.320e-13 Identity = 48/168 (28.57%), Postives = 85/168 (50.60%), Query Frame = 1
Query: 34 IIYAIVW----KFPVPCYGCDSGGIFYRCINGTGENTRSCEAYTLGEKRVKKATGFISGVVEDAGDFLEELWTFTKEDLPPIVYDFIQRLKELIMTAKAQVTEKMHYAIKYLTEAIPKLVAQAKALIGKGWEEFREVALDPVIAFVLTHIVSPLVAIAEALADFRNLV 525
++ A++W +PC CD+GG+FY+C++G G + +CEAY G + A G + AG++ EL FT + LP F + +MTA A+V +M YL + ++ + W F + A+ P+IA ++ +++ P+ +A+ F +LV
Sbjct: 339 LVAALIWLTARPVTLPCVNCDTGGMFYKCMDGRGAGSVTCEAYRAGNAAIASAR---KGALT-AGEYARELTVFTTK-LPEYPSKFAALIISKLMTAAAEVYARMISVSAYLKAKVAEIAKATLTPMYDMWAAFHDAAIKPLIAGMIKYVLQPVTKAMDAIVAFVHLV 501 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1598.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1598.2.1 >prot_P-wetherbeei_contig1598.2.1 ID=prot_P-wetherbeei_contig1598.2.1|Name=mRNA_P-wetherbeei_contig1598.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=722bp MIISTIIYAIVWKFPVPCYGCDSGGIFYRCINGTGENTRSCEAYTLGEKRback to top mRNA from alignment at P-wetherbeei_contig1598:3685..5868- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1598.2.1 ID=mRNA_P-wetherbeei_contig1598.2.1|Name=mRNA_P-wetherbeei_contig1598.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2184bp|location=Sequence derived from alignment at P-wetherbeei_contig1598:3685..5868- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1598:3685..5868- >mRNA_P-wetherbeei_contig1598.2.1 ID=mRNA_P-wetherbeei_contig1598.2.1|Name=mRNA_P-wetherbeei_contig1598.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2166bp|location=Sequence derived from alignment at P-wetherbeei_contig1598:3685..5868- (Phaeothamnion wetherbeei SAG_119_79)back to top |