mRNA_P-wetherbeei_contig15954.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15954.1.1
Unique NamemRNA_P-wetherbeei_contig15954.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Match: A0A7C3JCL9_9CHLR (Nitroreductase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3JCL9_9CHLR)

HSP 1 Score: 229 bits (585), Expect = 1.300e-74
Identity = 108/167 (64.67%), Postives = 140/167 (83.83%), Query Frame = 1
Query:    1 MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVIQDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTSFGISDGSRAIQSMVLAGWEEGVGSNWVGFSGFEEVKKLLGIPRELNMLALLPFGYPAQKAGGGKKKRKPLSEIAHRERFGQPF 501
            M+V +A++T+LA+R + D+PVSAET+ +ILEAG+ TGSA NRQPW+F+VI+D++ L++LG +A  G Y+A+A LAIAV +E + F +SDGSRAIQSM+LA WEEGVGSNWVGF G E VK LLGIP EL++LA+L FGYPAQ  G GKK+RKPLSE+AHRERFG+ +
Sbjct:    1 MDVFDAIKTLLAVRKYQDKPVSAETVHRILEAGRLTGSAMNRQPWHFIVIKDREMLRQLGALARYGAYIAEAALAIAVAIEKSPFAVSDGSRAIQSMMLAAWEEGVGSNWVGFVGMEGVKPLLGIPDELDILAILTFGYPAQTIGKGKKQRKPLSEVAHRERFGRAY 167          
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Match: A0A7V1QVN6_9CHLR (Nitroreductase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7V1QVN6_9CHLR)

HSP 1 Score: 226 bits (577), Expect = 2.230e-73
Identity = 105/168 (62.50%), Postives = 136/168 (80.95%), Query Frame = 1
Query:    1 MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVIQDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTSFGISDGSRAIQSMVLAGWEEGVGSNWVGFSGFE-EVKKLLGIPRELNMLALLPFGYPAQKAGGGKKKRKPLSEIAHRERFGQPF 501
            MNV EA+RT+LA+R++ DRPV  E +++ILEAG+ T SARN QPW+F+V+Q++DTL+ LG +A TGPY+AQAPLA+ V VE   F +SD SRAIQSM+L  W EGVGSNWVGF G   E+K LLGIP EL+++ ++PFGYPA+  G G+K+RK L+E+AHRERFGQPF
Sbjct:    1 MNVFEAVRTMLAVRSYQDRPVPDELVRRILEAGRLTASARNAQPWHFIVVQNRDTLRRLGELARTGPYIAQAPLAVVVAVEKGRFSLSDASRAIQSMMLTAWAEGVGSNWVGFEGLNGEIKSLLGIPAELDVVGIIPFGYPARPVGRGRKQRKALAEVAHRERFGQPF 168          
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Match: A0A537INH2_9BACT (Nitroreductase n=2 Tax=Terrabacteria group bacterium ANGP1 TaxID=2569760 RepID=A0A537INH2_9BACT)

HSP 1 Score: 223 bits (567), Expect = 7.160e-72
Identity = 99/167 (59.28%), Postives = 136/167 (81.44%), Query Frame = 1
Query:    1 MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVIQDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTSFGISDGSRAIQSMVLAGWEEGVGSNWVGFSGFEEVKKLLGIPRELNMLALLPFGYPAQKAGGGKKKRKPLSEIAHRERFGQPF 501
            M V +A+RTV+A+R + ++PV  + +++I+EAG+ TGS+ N QPW+FVV++D+D L++LGR+A +GPY+AQAPLA+ V +E T + +SD +RAIQSM+L  W EGVGSNWVGF G  EVK LLGIP +L++LA+LPFG+PAQ  G GKK+RKPLSE+A RER+G PF
Sbjct:    1 MEVFDAVRTVMAVRGYKEKPVPRDIVRRIVEAGRLTGSSMNGQPWHFVVVEDRDALRQLGRLARSGPYIAQAPLAVVVAIEKTRYAVSDATRAIQSMILTAWGEGVGSNWVGFLGLTEVKPLLGIPDDLDVLAILPFGFPAQALGRGKKRRKPLSEVARRERYGHPF 167          
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Match: A0A2V6S891_9BACT (Nitroreductase n=3 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6S891_9BACT)

HSP 1 Score: 222 bits (566), Expect = 1.020e-71
Identity = 103/167 (61.68%), Postives = 131/167 (78.44%), Query Frame = 1
Query:    1 MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVIQDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTSFGISDGSRAIQSMVLAGWEEGVGSNWVGFSGFEEVKKLLGIPRELNMLALLPFGYPAQKAGGGKKKRKPLSEIAHRERFGQPF 501
            M V EA+RT+LA+R + DR V    +Q+I+EAG+ TGSA N QPW+F+V+QD+DTL+ LG +A +GPYVA+APLAI VV++ T + +SD SRAI SM+L  W EGVGSNWVGF   E+V  LLGIP E ++LA+LPFGYPA + G GKKKRKPL  +AHRER+GQPF
Sbjct:    1 MEVFEAVRTMLAVRRYLDRAVPETIVQRIVEAGRLTGSAMNLQPWHFIVVQDRDTLRRLGALARSGPYVAEAPLAIVVVIDRTGYAVSDASRAIDSMMLTAWSEGVGSNWVGFGNLEKVNALLGIPSERDVLAILPFGYPADRIGRGKKKRKPLRAVAHRERYGQPF 167          
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Match: A0A537KSW7_9BACT (Nitroreductase n=3 Tax=Terrabacteria group bacterium ANGP1 TaxID=2569760 RepID=A0A537KSW7_9BACT)

HSP 1 Score: 221 bits (564), Expect = 2.190e-71
Identity = 102/168 (60.71%), Postives = 136/168 (80.95%), Query Frame = 1
Query:    1 MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVIQDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTSFGISDGSRAIQSMVLAGWEEGVGSNWVGFSGFEEVKKLLGIPRELNMLALLPFGYPAQKAGGGKKKRKPLSEIAHRERFGQPFP 504
            M V EA+RTVLA+R++ + PV +  +++I+E+G+ TGS+ N QPW+F+V+Q+ +TL++LGR+A +GPYVAQAPLA+ V +E T++ +SD SRAIQSM+L  W EGVGSNWVGF G  EVK LL IP +L++LA+LPFGYPAQ  G G+KKRK  SE+AHRE FGQPFP
Sbjct:    1 MEVFEAVRTVLAVRSYKETPVPSNVIRRIVESGRLTGSSMNGQPWHFIVVQNPETLRQLGRLARSGPYVAQAPLALVVAIERTTYAVSDASRAIQSMILTAWGEGVGSNWVGFMGLTEVKPLLRIPDDLDVLAILPFGYPAQTRGRGRKKRKSPSEVAHREVFGQPFP 168          
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Match: A0A521XCV9_9CHLR (Nitroreductase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A521XCV9_9CHLR)

HSP 1 Score: 221 bits (562), Expect = 4.270e-71
Identity = 103/168 (61.31%), Postives = 130/168 (77.38%), Query Frame = 1
Query:    1 MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVIQDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTS-FGISDGSRAIQSMVLAGWEEGVGSNWVGFSGFEEVKKLLGIPRELNMLALLPFGYPAQKAGGGKKKRKPLSEIAHRERFGQPF 501
            M V EA+RTVLA+R++ DRPV  + +++I+EAGQ TGS+ N QPW FVV+  +DTL+ LG +A +GPY+A APLAI + VE  S FG+SD SRAIQSMVL  W +GVGSNW GF G + + KL+G+P E + LA++PFGYPA   G GKKKRKPL E+AHRERFGQPF
Sbjct:    1 MEVFEAVRTVLAVRSYQDRPVPDDVVRRIVEAGQLTGSSMNMQPWRFVVVLHRDTLRRLGELARSGPYIAGAPLAIVIAVEKASKFGVSDASRAIQSMVLTAWADGVGSNWAGFGGLDAIGKLVGLPAEFDALAVIPFGYPASDVGRGKKKRKPLGEVAHRERFGQPF 168          
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Match: A0A7V3UQ57_9BACT (Nitroreductase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3UQ57_9BACT)

HSP 1 Score: 220 bits (561), Expect = 5.860e-71
Identity = 101/167 (60.48%), Postives = 134/167 (80.24%), Query Frame = 1
Query:    1 MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVIQDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTSFGISDGSRAIQSMVLAGWEEGVGSNWVGFSGFEEVKKLLGIPRELNMLALLPFGYPAQKAGGGKKKRKPLSEIAHRERFGQPF 501
            M V EA RT+LA+R + D+PV  + +++I+EAG+ TGS+ N QPW+F+V++++D L++LG +A TGPY+AQA LAI V +E T F +SD SRAIQSM+L  W +GVGSNWVGF G  EVK LLGIP +L++LA++PFGYPAQ  G GKK+RKPLS++AHRERFGQ F
Sbjct:    1 MEVFEAARTMLAVRNYQDKPVPPDVVRRIVEAGRLTGSSMNGQPWHFIVVENRDMLRQLGALARTGPYIAQAALAIVVAIEKTRFAVSDASRAIQSMMLTAWSDGVGSNWVGFLGPAEVKPLLGIPEDLDVLAIIPFGYPAQAVGKGKKQRKPLSKVAHRERFGQSF 167          
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Match: A0A2V8MTG5_9BACT (Nitroreductase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8MTG5_9BACT)

HSP 1 Score: 219 bits (559), Expect = 1.180e-70
Identity = 100/167 (59.88%), Postives = 132/167 (79.04%), Query Frame = 1
Query:    1 MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVIQDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTSFGISDGSRAIQSMVLAGWEEGVGSNWVGFSGFEEVKKLLGIPRELNMLALLPFGYPAQKAGGGKKKRKPLSEIAHRERFGQPF 501
            M V +A+RTVLA+R + + PV  + +++ILEAG+ +GSA N QPW+F+V+ +K+ L++LG +A TGPYVAQAPLAI V ++ T F ++D  RAIQSM+LA W EGVGSNWVGF G +++K LLGIP EL++LA++PFGYP Q  G GKK RKPLSE+AH  RFGQPF
Sbjct:    1 MEVFDAIRTVLAVRHYKETPVPPDVVRRILEAGRLSGSAVNGQPWHFIVVDEKEKLRQLGGLARTGPYVAQAPLAIVVAIQKTKFSVADAGRAIQSMILAAWSEGVGSNWVGFMGLDDLKPLLGIPDELDVLAIIPFGYPPQPIGKGKKNRKPLSEVAHHGRFGQPF 167          
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Match: A0A536H727_9CHLR (Nitroreductase n=9 Tax=Chloroflexi TaxID=200795 RepID=A0A536H727_9CHLR)

HSP 1 Score: 219 bits (559), Expect = 1.180e-70
Identity = 99/167 (59.28%), Postives = 133/167 (79.64%), Query Frame = 1
Query:    1 MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVIQDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTSFGISDGSRAIQSMVLAGWEEGVGSNWVGFSGFEEVKKLLGIPRELNMLALLPFGYPAQKAGGGKKKRKPLSEIAHRERFGQPF 501
            M   +A+RTVLA+R F D PV    +++I+EAG+ T SA NRQPW+F+V++DK+TL  LG++A+TGPY+AQAPLAI V ++ +   ISDGSRAIQ M+LA W +GVGSNWVGF+G  EV +LLGIP E+++LA+LPFGYP +  G G+KKRKPL E+A+ ER+G+PF
Sbjct:    1 METFDAIRTVLAVRHFKDTPVPEPIVRQIVEAGRLTASAGNRQPWHFIVVRDKETLSRLGQLASTGPYIAQAPLAIVVAMDSSPLAISDGSRAIQDMILAAWSQGVGSNWVGFNGLPEVNRLLGIPEEVSVLAILPFGYPVEAVGKGQKKRKPLGEVAYNERWGKPF 167          
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Match: A0A6J4UVG0_9CHLR (Nitroreductase family protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UVG0_9CHLR)

HSP 1 Score: 219 bits (558), Expect = 1.680e-70
Identity = 99/167 (59.28%), Postives = 130/167 (77.84%), Query Frame = 1
Query:    1 MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVIQDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTSFGISDGSRAIQSMVLAGWEEGVGSNWVGFSGFEEVKKLLGIPRELNMLALLPFGYPAQKAGGGKKKRKPLSEIAHRERFGQPF 501
            M+  EA+RTVLA+R FADRP+  E +++I+EA   T SARNRQPW+F+V+ D++TL+ LG +A TGPY+AQAPLA+ V+VE++   +SD SRAIQSM LA W  GVGSNWVGF G ++VK  LGIP  L++LA++PFGYPA+  G GKK RKPL+E+  R R+G PF
Sbjct:    1 MDAYEAVRTVLAVREFADRPLPEEVVRRIVEAAHLTASARNRQPWHFLVVDDRETLRRLGELAPTGPYIAQAPLAVVVMVEESPLAVSDASRAIQSMALAAWSAGVGSNWVGFHGLDQVKAPLGIPERLDVLAIVPFGYPARPVGAGKKTRKPLAEVVSRNRYGHPF 167          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15954.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C3JCL9_9CHLR1.300e-7464.67Nitroreductase n=1 Tax=Chloroflexi bacterium TaxID... [more]
A0A7V1QVN6_9CHLR2.230e-7362.50Nitroreductase n=2 Tax=Chloroflexi TaxID=200795 Re... [more]
A0A537INH2_9BACT7.160e-7259.28Nitroreductase n=2 Tax=Terrabacteria group bacteri... [more]
A0A2V6S891_9BACT1.020e-7161.68Nitroreductase n=3 Tax=Candidatus Rokubacteria bac... [more]
A0A537KSW7_9BACT2.190e-7160.71Nitroreductase n=3 Tax=Terrabacteria group bacteri... [more]
A0A521XCV9_9CHLR4.270e-7161.31Nitroreductase n=1 Tax=Dehalococcoidia bacterium T... [more]
A0A7V3UQ57_9BACT5.860e-7160.48Nitroreductase n=1 Tax=bacterium TaxID=1869227 Rep... [more]
A0A2V8MTG5_9BACT1.180e-7059.88Nitroreductase n=1 Tax=Acidobacteria bacterium Tax... [more]
A0A536H727_9CHLR1.180e-7059.28Nitroreductase n=9 Tax=Chloroflexi TaxID=200795 Re... [more]
A0A6J4UVG0_9CHLR1.680e-7059.28Nitroreductase family protein n=1 Tax=uncultured T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15954contigP-wetherbeei_contig15954:94..600 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog485913.Krac_6166
PFAMsNitroreductase
Model size507
Max annot lvl200795|Chloroflexi
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.57e-63
EggNOG OGsCOG0778@1|root,COG0778@2|Bacteria,2G7DQ@200795|Chloroflexi
DescriptionNitroreductase family
Cds size507
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186072.6613116-CDS-P-wetherbeei_contig15954:93..6001683186072.6613116-CDS-P-wetherbeei_contig15954:93..600Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15954 94..600 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15954.1.1prot_P-wetherbeei_contig15954.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15954 94..600 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15954.1.1

>prot_P-wetherbeei_contig15954.1.1 ID=prot_P-wetherbeei_contig15954.1.1|Name=mRNA_P-wetherbeei_contig15954.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp
MNVQEALRTVLAIRAFADRPVSAETLQKILEAGQYTGSARNRQPWNFVVI
QDKDTLQELGRMATTGPYVAQAPLAIAVVVEDTSFGISDGSRAIQSMVLA
GWEEGVGSNWVGFSGFEEVKKLLGIPRELNMLALLPFGYPAQKAGGGKKK
RKPLSEIAHRERFGQPFP*
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mRNA from alignment at P-wetherbeei_contig15954:94..600+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15954.1.1 ID=mRNA_P-wetherbeei_contig15954.1.1|Name=mRNA_P-wetherbeei_contig15954.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig15954:94..600+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGTCCAAGAAGCTCTCCGCACCGTCCTCGCCATCCGCGCTTTCGC CGACCGCCCCGTCTCCGCCGAGACACTCCAGAAAATCCTGGAAGCGGGCC AATACACGGGGAGCGCGCGCAATCGTCAGCCCTGGAATTTCGTCGTCATC CAGGACAAGGACACGCTCCAGGAGCTGGGCCGCATGGCCACCACAGGCCC CTACGTCGCCCAGGCCCCCCTCGCCATCGCCGTGGTGGTCGAGGACACAT CGTTTGGAATCTCCGACGGCAGCCGCGCCATCCAGTCGATGGTGCTGGCG GGCTGGGAGGAGGGCGTAGGCTCCAATTGGGTCGGCTTCAGCGGCTTTGA GGAAGTTAAAAAGCTGCTGGGAATCCCCCGCGAGCTCAATATGCTGGCTC TCTTGCCGTTCGGCTATCCGGCCCAGAAGGCGGGCGGAGGCAAGAAGAAG CGCAAACCGCTCAGCGAGATCGCCCACCGCGAGCGCTTCGGGCAGCCCTT CCCGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15954:94..600+

>mRNA_P-wetherbeei_contig15954.1.1 ID=mRNA_P-wetherbeei_contig15954.1.1|Name=mRNA_P-wetherbeei_contig15954.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig15954:94..600+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGTCCAAGAAGCTCTCCGCACCGTCCTCGCCATCCGCGCTTTCGC
CGACCGCCCCGTCTCCGCCGAGACACTCCAGAAAATCCTGGAAGCGGGCC
AATACACGGGGAGCGCGCGCAATCGTCAGCCCTGGAATTTCGTCGTCATC
CAGGACAAGGACACGCTCCAGGAGCTGGGCCGCATGGCCACCACAGGCCC
CTACGTCGCCCAGGCCCCCCTCGCCATCGCCGTGGTGGTCGAGGACACAT
CGTTTGGAATCTCCGACGGCAGCCGCGCCATCCAGTCGATGGTGCTGGCG
GGCTGGGAGGAGGGCGTAGGCTCCAATTGGGTCGGCTTCAGCGGCTTTGA
GGAAGTTAAAAAGCTGCTGGGAATCCCCCGCGAGCTCAATATGCTGGCTC
TCTTGCCGTTCGGCTATCCGGCCCAGAAGGCGGGCGGAGGCAAGAAGAAG
CGCAAACCGCTCAGCGAGATCGCCCACCGCGAGCGCTTCGGGCAGCCCTT
CCCGTAG
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