mRNA_P-wetherbeei_contig15939.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Match: A0A537T1J4_9PROT (SBP_bac_5 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537T1J4_9PROT) HSP 1 Score: 236 bits (602), Expect = 4.490e-76 Identity = 110/143 (76.92%), Postives = 125/143 (87.41%), Query Frame = 1
Query: 1 LGIDANIRMVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLAGIADPAIDAMIDRIISADTRPALTVACRALDRLIRAGRYWIPHWYKASHWIAYWDTFGRPPQKPRYARGVLETWWHDRDKAAKI 429
LGI+A +R+VDAVQ+RKR+DDFDFDL VQRFGFSSTPGDSLRS+FSS AAA +GSQNLAGI+DP IDA+ID+II+AD R LT ACRALDR+IR GRYW+PHWYK SHW+AYWD F RP KPRYARGV ET W+DRDKAA I
Sbjct: 132 LGIEATLRIVDAVQYRKRVDDFDFDLTVQRFGFSSTPGDSLRSFFSSQAAAKRGSQNLAGISDPVIDALIDKIIAADNRATLTAACRALDRVIRTGRYWVPHWYKPSHWLAYWDVFSRPATKPRYARGVPETCWYDRDKAANI 274
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Match: A0A6L5FEU6_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FEU6_9HYPH) HSP 1 Score: 246 bits (629), Expect = 5.600e-76 Identity = 115/143 (80.42%), Postives = 129/143 (90.21%), Query Frame = 1
Query: 1 LGIDANIRMVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLAGIADPAIDAMIDRIISADTRPALTVACRALDRLIRAGRYWIPHWYKASHWIAYWDTFGRPPQKPRYARGVLETWWHDRDKAAKI 429
+GIDA +RMVD VQFRKR+DDFDFD+ VQRFGFSSTPGDSLR+YFSS AAA+KGSQN+AGIADPAIDA+ID+IISA TR LTVACRALDR+IRAGRYWIPHWYKASHWIAYWD FGRP KPR+ARG+ TWW+D KAAK+
Sbjct: 492 VGIDATVRMVDPVQFRKRVDDFDFDITVQRFGFSSTPGDSLRAYFSSQAAAIKGSQNIAGIADPAIDALIDKIISAGTRAELTVACRALDRVIRAGRYWIPHWYKASHWIAYWDVFGRPAAKPRFARGIPATWWYDPAKAAKL 634
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Match: A0A537SVS4_9PROT (ABC transporter substrate-binding protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SVS4_9PROT) HSP 1 Score: 245 bits (625), Expect = 1.510e-75 Identity = 110/143 (76.92%), Postives = 131/143 (91.61%), Query Frame = 1
Query: 1 LGIDANIRMVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLAGIADPAIDAMIDRIISADTRPALTVACRALDRLIRAGRYWIPHWYKASHWIAYWDTFGRPPQKPRYARGVLETWWHDRDKAAKI 429
LGI+AN+R+VD VQ+RKR+DDFDFDL +QRF FSSTPGDSLRSYFSS AAA++GSQNLAGI+DP IDA+IDRII+AD+R +L AC+ALDR+IR+GRYW+PHWYKASHW+AYWD FGRP KPRYARG+ ETWW+DR+KAAKI
Sbjct: 476 LGIEANLRIVDPVQYRKRVDDFDFDLTIQRFSFSSTPGDSLRSYFSSPAAAMRGSQNLAGISDPVIDALIDRIIAADSRNSLVTACKALDRVIRSGRYWVPHWYKASHWLAYWDVFGRPATKPRYARGIPETWWYDREKAAKI 618
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Match: A0A1Q7BZB3_9PROT (SBP_bac_5 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BZB3_9PROT) HSP 1 Score: 241 bits (615), Expect = 4.460e-74 Identity = 108/143 (75.52%), Postives = 130/143 (90.91%), Query Frame = 1
Query: 1 LGIDANIRMVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLAGIADPAIDAMIDRIISADTRPALTVACRALDRLIRAGRYWIPHWYKASHWIAYWDTFGRPPQKPRYARGVLETWWHDRDKAAKI 429
LGI+AN+R+VD VQ+RKR+DDFDFDL VQRFGFS+TPGDSLR +FSS AAA++GSQNLAGI+DP IDA+I++II+AD R +LT+ACRALDR+IR+GRYW+PHWYKASHW+AYWD F RP KPRYARG ETWW+DRDKAAK+
Sbjct: 473 LGIEANLRIVDPVQYRKRVDDFDFDLTVQRFGFSTTPGDSLRIFFSSQAAAMRGSQNLAGISDPVIDALIEKIIAADNRTSLTMACRALDRVIRSGRYWVPHWYKASHWLAYWDVFSRPASKPRYARGAPETWWYDRDKAAKL 615
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Match: A0A1Q7BNX9_9PROT (SBP_bac_5 domain-containing protein n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BNX9_9PROT) HSP 1 Score: 240 bits (613), Expect = 9.190e-74 Identity = 109/146 (74.66%), Postives = 130/146 (89.04%), Query Frame = 1
Query: 1 LGIDANIRMVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLAGIADPAIDAMIDRIISADTRPALTVACRALDRLIRAGRYWIPHWYKASHWIAYWDTFGRPPQKPRYARGVLETWWHDRDKAAKIGPG 438
LGI+AN+R+VD VQ+RKR+DDFDFDL VQRFGFSSTPGDSLRS+FSS AA ++GSQNLAG++DP IDA+I++II+AD R +LT ACRALDR+IR+GRYW+PHWYKASHW+AYWD F RP KPRYARG ETWW+DRDKAAK+ G
Sbjct: 476 LGIEANLRIVDPVQYRKRVDDFDFDLTVQRFGFSSTPGDSLRSFFSSQAAGMRGSQNLAGMSDPVIDALIEKIIAADDRASLTHACRALDRVIRSGRYWVPHWYKASHWLAYWDVFSRPATKPRYARGAPETWWYDRDKAAKLERG 621
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Match: A0A363TLQ4_9BRAD (SBP_bac_5 domain-containing protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TLQ4_9BRAD) HSP 1 Score: 240 bits (612), Expect = 1.430e-73 Identity = 110/144 (76.39%), Postives = 128/144 (88.89%), Query Frame = 1
Query: 1 LGIDANIRMVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLAGIADPAIDAMIDRIISADTRPALTVACRALDRLIRAGRYWIPHWYKASHWIAYWDTFGRPPQKPRYARGVLETWWHDRDKAAKIG 432
+GIDA +R+VD VQ+RKR+DDFDFDL V RFGFS PGDSLRS+FSS AAA +GS NLAG+ADPAIDA+I+RII+A+TRPAL ACRALDR+IRAGRYW+P W KASHWIAYWD FGRPPQKP+YARGVLETWW+D +AAK+G
Sbjct: 480 VGIDATLRIVDPVQYRKRVDDFDFDLTVSRFGFSLAPGDSLRSFFSSQAAASRGSNNLAGMADPAIDALIERIIAAETRPALVFACRALDRVIRAGRYWVPQWNKASHWIAYWDVFGRPPQKPKYARGVLETWWYDETRAAKLG 623
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Match: A0A6N7GZA0_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GZA0_9HYPH) HSP 1 Score: 240 bits (612), Expect = 1.460e-73 Identity = 104/142 (73.24%), Postives = 129/142 (90.85%), Query Frame = 1
Query: 1 LGIDANIRMVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLAGIADPAIDAMIDRIISADTRPALTVACRALDRLIRAGRYWIPHWYKASHWIAYWDTFGRPPQKPRYARGVLETWWHDRDKAAK 426
LG+DA++R+VD Q+R+R+DDFDFD+ VQRF FS+ PGDSLR+YF+S AAA+KGSQNLAGIADP +DA++D++I AD+RPAL AC+ALDR+IRAGRYW+PHWYKASHWIAYWD FGRPP KPR+ARGV ETWW+DR++AAK
Sbjct: 481 LGVDASLRVVDPAQYRRRVDDFDFDITVQRFSFSTLPGDSLRTYFTSQAAAVKGSQNLAGIADPVVDALVDKVIGADSRPALVTACKALDRVIRAGRYWVPHWYKASHWIAYWDVFGRPPTKPRFARGVPETWWYDRERAAK 622
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Match: A0A537MWM0_9PROT (ABC transporter substrate-binding protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MWM0_9PROT) HSP 1 Score: 233 bits (595), Expect = 1.450e-71 Identity = 100/146 (68.49%), Postives = 129/146 (88.36%), Query Frame = 1
Query: 1 LGIDANIRMVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLAGIADPAIDAMIDRIISADTRPALTVACRALDRLIRAGRYWIPHWYKASHWIAYWDTFGRPPQKPRYARGVLETWWHDRDKAAKIGPG 438
LG++AN+R+VD VQ+RKR+DDFDFD+ VQRFGFS+TPG+SLR++FSS AAA+KGSQN+ GIADP IDA+I+R+I+AD+RP L AC+ALDR+IR+GRYW+PHWYKASHW+AYWD FGRP +PRYAR + +TWW+DR+K K+ G
Sbjct: 425 LGVEANLRIVDPVQYRKRVDDFDFDIVVQRFGFSNTPGESLRTFFSSHAAAIKGSQNVGGIADPVIDALIERVIAADSRPQLIAACKALDRVIRSGRYWVPHWYKASHWLAYWDVFGRPEAQPRYARAIPDTWWYDREKGEKLSRG 570
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Match: A0A0S3PQH2_9BRAD (Oligopeptide-binding protein AppA n=2 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PQH2_9BRAD) HSP 1 Score: 232 bits (592), Expect = 1.260e-70 Identity = 106/142 (74.65%), Postives = 126/142 (88.73%), Query Frame = 1
Query: 1 LGIDANIRMVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLAGIADPAIDAMIDRIISADTRPALTVACRALDRLIRAGRYWIPHWYKASHWIAYWDTFGRPPQKPRYARGVLETWWHDRDKAAK 426
+GIDA +R+VDAVQFR+R+DDFDFD VQRF FS+TPGDSLR+YFSS AAA+KGS+NLAG+ADPAID +I++II+ADTRP L A RALDR+IRA RYW+PHW KASHWIAYWD + RP KP+YARGV+ETWW+DRDKAAK
Sbjct: 479 IGIDATLRVVDAVQFRRRLDDFDFDATVQRFSFSTTPGDSLRTYFSSQAAAIKGSRNLAGMADPAIDMLIEKIIAADTRPELVFAARALDRVIRANRYWVPHWNKASHWIAYWDLYSRPAAKPKYARGVMETWWYDRDKAAK 620
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Match: A0A127F6I9_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F6I9_9HYPH) HSP 1 Score: 231 bits (588), Expect = 4.820e-70 Identity = 108/143 (75.52%), Postives = 125/143 (87.41%), Query Frame = 1
Query: 1 LGIDANIRMVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLAGIADPAIDAMIDRIISADTRPALTVACRALDRLIRAGRYWIPHWYKASHWIAYWDTFGRPPQKPRYARGVLETWWHDRDKAAKI 429
LGIDA +R+VD VQ ++R+ DFDFD+ +QRFGFSSTPGDSLR+YFSS +A +KGSQNL+G+ADPAIDAMI+RII+A +R LTVACRALDRLIRAGRYW+P WYKASHWIAYWDTFG P KPRYARG ETWWHD KA+KI
Sbjct: 478 LGIDARLRLVDPVQAQQRMKDFDFDVVIQRFGFSSTPGDSLRTYFSSKSADIKGSQNLSGMADPAIDAMIERIIAAQSRAELTVACRALDRLIRAGRYWVPQWYKASHWIAYWDTFGWPKTKPRYARGAPETWWHDAAKASKI 620 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15939.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15939.1.1 >prot_P-wetherbeei_contig15939.1.1 ID=prot_P-wetherbeei_contig15939.1.1|Name=mRNA_P-wetherbeei_contig15939.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp MVDAVQFRKRIDDFDFDLAVQRFGFSSTPGDSLRSYFSSGAAALKGSQNLback to top mRNA from alignment at P-wetherbeei_contig15939:6..446+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15939.1.1 ID=mRNA_P-wetherbeei_contig15939.1.1|Name=mRNA_P-wetherbeei_contig15939.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig15939:6..446+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15939:6..446+ >mRNA_P-wetherbeei_contig15939.1.1 ID=mRNA_P-wetherbeei_contig15939.1.1|Name=mRNA_P-wetherbeei_contig15939.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig15939:6..446+ (Phaeothamnion wetherbeei SAG_119_79)back to top |