mRNA_P-wetherbeei_contig15938.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15938.1.1
Unique NamemRNA_P-wetherbeei_contig15938.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A835ZKL0_9STRA (PRA-CH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKL0_9STRA)

HSP 1 Score: 301 bits (770), Expect = 4.700e-94
Identity = 219/454 (48.24%), Postives = 274/454 (60.35%), Query Frame = 1
Query:    1 MLLPLLPLPKLPSDADGMAAPDEV--VKRLSVVGEVVFDGAEHIAAIDVTRFKPLLHACACRVGTFSFPPP--ADADWTDAAVAWLDLGARRIVVRLREHSVEAAEAFSTWAGQLSDSRRRFVVSLASRDFSTGTGAASTFEAFLVSTATAVCDGLRSATGAVHFDLDGCSVLQSTAT-VAALVGRLHGKEGSATYLEVALGDACDVVTRAFVAESADHPK-GAETANSGKIANGRVGSRAATTAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
            M++PL+ +P  P+D   + A ++V  ++RL V+G+V   GA H A    T + PLL  C CRVG F        D   TDA V+WLD GARR V+ +++ +  AA A + W  QL D+R R V+ + S +  +        EA + +    + + L +A   + FD+    V   TAT +A L+  L GKEGSA YLE+   +  D +T + + +   H + G +      + +    S  AT    XXXXXXXXXXXXX                   + ACLRSDR DGLI TVV D  GVALGLVYSNA S+AAS+A GRG+YWSRSRGG+WRKGDTSGAWQALL +S+DCDSDALRF+V QHG PPAFCH NRRACW G              +GGLG LERTL  R   +P GSYTARLF+D ALLRNKLVEEAQELAEA A D VASE
Sbjct:    1 MIIPLVQVP--PTDGSAVTA-EQVPELRRLHVIGDVHLAGAAHDAH---TSYAPLLAQCGCRVGPFGAEDGFLEDDAITDAIVSWLDKGARRAVLHMQQPAASAA-ALAAWTQQLPDARSRLVLQVQSSNLGSS-------EAEIAAALPPLIESLSTAVCTMQFDMAESPV---TATRLAQLLKPLRGKEGSAAYLELVFCNV-DQLTTSLIGQL--HKEFGIDVVAPCHVESVPDPSDTATPXXXXXXXXXXXXXXXXQDVAAA-------------VFACLRSDRPDGLIPTVVCDECGVALGLVYSNAQSVAASIACGRGVYWSRSRGGLWRKGDTSGAWQALLALSMDCDSDALRFLVVQHGAPPAFCHFNRRACWAG--------------EGGLGALERTLAARRASAPAGSYTARLFSDAALLRNKLVEEAQELAEAQAPDDVASE 407          
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A6H5L2R7_9PHAE (PRA-CH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R7_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 4.160e-72
Identity = 185/408 (45.34%), Postives = 221/408 (54.17%), Query Frame = 1
Query:  202 PPADADWTDAAVAWLDLGARRIVVRLREHSVEAAEAFSTWAGQLSDSRRRFVVSLASRDFSTGTGAASTFEAFLVSTATAVCDGLRSATGAVHFDLDGCSVLQSTATVAALVGRLHGKEGSATYLEVALGDACDVVTRA-----FVAESADHPKGAETANSGKIANGRVGSRAATTAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIA--ACLRSDRDDGLITTVVVDASGVALGL--------------------VYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
            P A+ + TDA VAWLD GARR++V L      A +  + W+ QL  SR R V S  +RD     G     E+       AV DGLR     V  D +G  V      V   +G + GKEG+  Y+EV       V TR+                  + N+G    G +G       +            XXXXXXXXXXXXXXXXX     A  ACLR+DR DGL+TTVV D  G+ALGL                    VYSN++SI AS+ +GRG+YWSRSRGG+WRKGDTSGAWQ L G+++DCDSDA++F V QHG+PPAFCH NRR CW                + GLGHLER L  R   +P GSYT RLF DP LLRNKLVEEAQELAEA    HVA E
Sbjct:    2 PKANGE-TDAVVAWLDSGARRVIVALDVSDPGAVQGLADWSTQLPASRHRLVASFRARDLRMDAGGGGLGESLR-----AVMDGLRPVVSCVQVDFEG--VYAVAPQVLKELGGVRGKEGAPGYMEV-------VFTRSPAPAPXXXXXXXXXXXXSSGNTGWSPEG-IGKLHHEYGVDVQCPATLSLEGXXXXXXXXXXXXXXXXXVDAVSAFLACLRTDRPDGLMTTVVCDTMGIALGLQPLPPPPNSCTPNLRTPPSKVYSNSSSIRASIESGRGVYWSRSRGGLWRKGDTSGAWQELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWE--------------EERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEE 379          
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: D8LDR4_ECTSI (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR4_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.730e-63
Identity = 184/453 (40.62%), Postives = 223/453 (49.23%), Query Frame = 1
Query:   22 LPKLPSDADGMAAPDEVVKRLSVVGEVVFDGAEHIAAIDVTRFKPLLHACACRVGTFS-FPPPADADWTDAAVAWLDLGARRIVVRLREHSVEAAEAFSTWAGQLSDSRRRFVVSLASRDFSTGTGAASTFEAFLVSTATAVCDGLRSATGAVHFDLDGCSVLQSTATVAALVGRLHGKEGSATYLEVALGDACDVVTRAFVAESADHPKGAETANSGKIANGRVG-----------SRAATTAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
            LP + +D       D +  RL+ + E+V        A  V  FK  L   ACRVG F       DA+ TDA VAWLD GARR++V L      A +  + W+ QL  SR R V S  +RD     G     EA        V DGLR     V  D +G     +   V   +G + GKEG+  Y+EV       V TR+     A         N+   ++G  G                           XXXXXXXXXXXXXXXXXXX         CLR+DR DGL+TTVV D  G+ALGLVYSN+ SI AS+ +GRG+YWSRSRGG+WRKGDTSGAWQ L G+++DCDSDA++F V QHG+PPAFCH NRR CW                + GLGHLER L  R                          +AQELAEA    HVA E
Sbjct:    3 LPVIVNDGQSPPRADALTTRLAALSELVIQLPSGGGAGMVAGFKAFLGEFACRVGPFDVLAGDRDAN-TDAVVAWLDSGARRVIVALDVSDPGAVQGLADWSTQLPASRHRLVASFRARDLRMDAGGGGLGEALRT-----VMDGLRPVVSCVQVDFEGAYA--AAPQVLKELGGVRGKEGAPGYMEV-------VFTRSPAPAPAXXXXXXXXXNN---SSGNTGWSPEGIGKLHHEYGVDVQCPATLSLEGXXXXXXXXXXXXXXXXXXXVDAVSAFLTCLRTDRPDGLMTTVVCDTMGIALGLVYSNSTSIRASIESGRGVYWSRSRGGLWRKGDTSGAWQELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWE--------------EERGLGHLERMLVKR--------------------------KAQELAEAETKQHVAEE 397          
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7S2V4U4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4U4_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.120e-61
Identity = 113/173 (65.32%), Postives = 126/173 (72.83%), Query Frame = 1
Query:  826 ACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
            AC R+DR DGL TTVVVD  GVALGLVYSNA S+ AS AA RG+YWSRSRGG+WRKGDTSGA Q L G+S+DCDSDAL F V+Q G+PPAFCHLNRR CW  G               G+G LERTL  RL ++P GSYT RLF DPALLRNKL+EE QEL EA     VA+E
Sbjct:  223 ACCRTDRPDGLFTTVVVDECGVALGLVYSNALSVKASFAAKRGVYWSRSRGGLWRKGDTSGAVQELKGISIDCDSDALCFRVDQKGDPPAFCHLNRRTCWDAGR--------------GIGKLERTLTQRLANAPAGSYTKRLFDDPALLRNKLLEEVQELVEAETVGDVAAE 381          
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7S0E3V5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E3V5_9EUKA)

HSP 1 Score: 205 bits (522), Expect = 2.220e-60
Identity = 108/175 (61.71%), Postives = 128/175 (73.14%), Query Frame = 1
Query:  820 IAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
            + +C R+DR DGL+TTVV +  GVALGLVYSN AS+AA++ AGRG+Y SRS+GG+WRKGDTSGA+Q LL V LDCD DA+RF V QHG+PPAFCH    +CW        G A+G      L  LE+TL  R  ++PPGSYTARLF D  LLR KLVEEAQELAEAT  DH A+E
Sbjct:   16 LGSCARTDRTDGLMTTVVAEEGGVALGLVYSNPASLAAAVEAGRGVYHSRSKGGLWRKGDTSGAYQTLLRVELDCDHDAIRFTVSQHGDPPAFCHKQSLSCW--------GPASG------LRDLEKTLVKRKSNAPPGSYTARLFGDADLLRKKLVEEAQELAEATEPDHAAAE 176          
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A0G4HM72_9ALVE (PRA-CH domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HM72_9ALVE)

HSP 1 Score: 213 bits (542), Expect = 3.000e-60
Identity = 111/174 (63.79%), Postives = 127/174 (72.99%), Query Frame = 1
Query:  823 AACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
            AA L+SDR DGL TTVV D SGVALGLVYSN  S+ A++   RG+YWSRSRGG+WRKGDTSGAWQ LL + +DCD DA+RF V Q G PPAFCHL RR CW          AAG      L  LE TL+GRL+ +P GSYT RLF DP LLR+KL+EEAQEL+EAT  DHVA+E
Sbjct:  257 AATLKSDRPDGLFTTVVCDESGVALGLVYSNVQSLHAAVECMRGVYWSRSRGGLWRKGDTSGAWQGLLSIDVDCDRDAIRFRVVQQGEPPAFCHLQRRTCWS--------AAAG------LRALEETLKGRLKTAPAGSYTKRLFEDPQLLRHKLLEEAQELSEATEKDHVAAE 416          
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7S2WIY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIY7_9STRA)

HSP 1 Score: 210 bits (535), Expect = 9.990e-60
Identity = 109/173 (63.01%), Postives = 120/173 (69.36%), Query Frame = 1
Query:  826 ACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
            ACLR+DR DGL TTVV D  GVALGLVYSN  SI A++   RG+YWSRSRGG+WRKGDTSGAWQ L  +  DCDSDALRF V QHG+PPAFCH N R CW                 GGL  LE+TL  R   +P GSYT RLF DP LLRNKL+EEAQEL EA   DHVA+E
Sbjct:  211 ACLRTDRSDGLYTTVVADQCGVALGLVYSNPESIRAAVCCSRGVYWSRSRGGLWRKGDTSGAWQDLFLIQADCDSDALRFTVHQHGSPPAFCHRNCRTCW--------------GPHGGLTELEQTLAERRASAPAGSYTKRLFEDPELLRNKLLEEAQELIEAEEPDHVAAE 369          
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7S2DG90_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DG90_9EUKA)

HSP 1 Score: 206 bits (525), Expect = 2.040e-57
Identity = 105/175 (60.00%), Postives = 120/175 (68.57%), Query Frame = 1
Query:  820 IAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
            +AAC+R+DR DGL  T+V +  G ALGLVYS+ ASI A+L+ GRG+YWSRSR  +WRKGDTSGAWQ L  + LDCD DAL F V QHG PPAFCH +  +CW                  GL HL+  LR R   +PPGSYT RLF D  LLRNKLVEEAQELAEAT  DHVASE
Sbjct:  285 VAACIRTDRSDGLFPTLVAEEDGAALGLVYSSTASIGAALSCGRGVYWSRSRQALWRKGDTSGAWQTLKRIRLDCDGDALCFTVTQHGEPPAFCHKSSLSCW--------------GLPSGLHHLQMVLRQRKASAPPGSYTKRLFDDSTLLRNKLVEEAQELAEATEPDHVASE 445          
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7S4AZF9_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4AZF9_CHRCT)

HSP 1 Score: 199 bits (505), Expect = 2.350e-57
Identity = 105/175 (60.00%), Postives = 125/175 (71.43%), Query Frame = 1
Query:  820 IAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
            +AA  RSDR D L T++V +ASG ALGLVYS+  SI  ++  GRGIYWSRSRG +W+KGD+SGAWQ L+ + +DCDSDALRFVV Q+G PPAFCH     CW        G A G      +  L+ TL+ RLR++PPGSYT RLF DP LLR KLVEEAQELAEAT  DHVA+E
Sbjct:   22 LAAVARSDRPDELYTSLVEEASGPALGLVYSSDVSIKEAVRRGRGIYWSRSRGSLWQKGDSSGAWQHLVRIDIDCDSDALRFVVRQYGEPPAFCHRKTLTCW--------GHATG------IRELQETLQSRLRNAPPGSYTKRLFDDPDLLRQKLVEEAQELAEATDADHVAAE 182          
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7R9UQV6_DIALT (Hypothetical protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UQV6_DIALT)

HSP 1 Score: 200 bits (509), Expect = 4.500e-56
Identity = 107/175 (61.14%), Postives = 125/175 (71.43%), Query Frame = 1
Query:  820 IAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
            + AC R+DR DGL+TTVVVD  GV LGLVYS+A S+  S+ AGRGIY+SRSR  +WRKGDTSGA Q L  + +DCDSDALRF V Q G PPAFCHL  R CW        G A G      L  L+RTL+ RL  +P GSY+A+LFADP LLR+KL+EEAQEL EAT  DHVA+E
Sbjct:  161 LVACARTDRADGLLTTVVVDEGGVCLGLVYSSAESVQESVRAGRGIYFSRSRNSLWRKGDTSGATQELQRIEVDCDSDALRFTVRQLGEPPAFCHLGTRTCW--------GEARG------LHALQRTLQARLASAPAGSYSAKLFADPTLLRHKLLEEAQELIEATEPDHVAAE 321          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZKL0_9STRA4.700e-9448.24PRA-CH domain-containing protein n=1 Tax=Tribonema... [more]
A0A6H5L2R7_9PHAE4.160e-7245.34PRA-CH domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LDR4_ECTSI1.730e-6340.62Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Ectocarp... [more]
A0A7S2V4U4_9STRA1.120e-6165.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0E3V5_9EUKA2.220e-6061.71Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A0G4HM72_9ALVE3.000e-6063.79PRA-CH domain-containing protein n=1 Tax=Chromera ... [more]
A0A7S2WIY7_9STRA9.990e-6063.01Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2DG90_9EUKA2.040e-5760.00Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S4AZF9_CHRCT2.350e-5760.00Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7R9UQV6_DIALT4.500e-5661.14Hypothetical protein n=2 Tax=Diacronema lutheri Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15938contigP-wetherbeei_contig15938:160..1557 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LDR4
Preferred nameHIS4
PFAMsHistidinol_dh,PRA-CH,PRA-PH
Model size1347
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00099,RC00242,RC00463,RC01055
KEGG koko:K11755,ko:K14152
KEGG ReactionR01158,R01163,R03012,R04035,R04037
KEGG Pathwayko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230
KEGG ModuleM00026
Hectar predicted targeting categoryother localisation
GOsGO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0004635,GO:0004636,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016491,GO:0016614,GO:0016616,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons2
Evalue2.84e-64
EggNOG OGsCOG0139@1|root,KOG4311@2759|Eukaryota
EC1.1.1.23,3.5.4.19,3.6.1.31
Descriptionphosphoribosyl-ATP diphosphatase activity
Cds size1347
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186072.0927072-CDS-P-wetherbeei_contig15938:159..7551683186072.0927072-CDS-P-wetherbeei_contig15938:159..755Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15938 160..755 +
1683186072.1061933-CDS-P-wetherbeei_contig15938:806..15571683186072.1061933-CDS-P-wetherbeei_contig15938:806..1557Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15938 807..1557 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15938.1.1prot_P-wetherbeei_contig15938.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15938 160..1557 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15938.1.1

>prot_P-wetherbeei_contig15938.1.1 ID=prot_P-wetherbeei_contig15938.1.1|Name=mRNA_P-wetherbeei_contig15938.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=449bp
MLLPLLPLPKLPSDADGMAAPDEVVKRLSVVGEVVFDGAEHIAAIDVTRF
KPLLHACACRVGTFSFPPPADADWTDAAVAWLDLGARRIVVRLREHSVEA
AEAFSTWAGQLSDSRRRFVVSLASRDFSTGTGAASTFEAFLVSTATAVCD
GLRSATGAVHFDLDGCSVLQSTATVAALVGRLHGKEGSATYLEVALGDAC
DVVTRAFVAESADHPKGAETANSGKIANGRVGSRAATTAMTNGGGGGSTP
AEASAESAVVAAASGSGVDAAAAIAACLRSDRDDGLITTVVVDASGVALG
LVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDS
DALRFVVEQHGNPPAFCHLNRRACWPGGGGGGSGVAAGGAFDGGLGHLER
TLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASEV
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mRNA from alignment at P-wetherbeei_contig15938:160..1557+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15938.1.1 ID=mRNA_P-wetherbeei_contig15938.1.1|Name=mRNA_P-wetherbeei_contig15938.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1398bp|location=Sequence derived from alignment at P-wetherbeei_contig15938:160..1557+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCCTGCCGCTGCTGCCGCTACCAAAACTGCCGTCCGATGCCGATGG CATGGCGGCACCCGACGAGGTCGTGAAGCGGCTATCCGTCGTGGGCGAGG TCGTCTTCGACGGAGCGGAGCACATCGCAGCCATCGATGTCACGCGCTTC AAGCCTCTTCTGCACGCCTGCGCATGCCGCGTCGGCACCTTTTCGTTCCC GCCGCCAGCAGATGCCGACTGGACGGATGCCGCCGTCGCGTGGCTCGACT TGGGGGCCCGGCGCATTGTCGTGCGCTTGAGAGAACATTCAGTGGAGGCA GCGGAAGCCTTCTCCACGTGGGCGGGGCAACTCTCAGATTCAAGACGACG ATTTGTGGTGTCACTGGCGTCGCGAGACTTTAGTACGGGAACTGGCGCCG CTTCAACTTTTGAAGCCTTTTTGGTTTCAACGGCGACAGCAGTCTGCGAC GGGCTGCGCTCCGCCACAGGCGCCGTGCATTTCGATCTTGACGGCTGCAG TGTCTTGCAGTCGACGGCGACCGTGGCGGCGTTGGTGGGCCGTCTGCATG GCAAGGAAGGGTCCGCCACATACCTTGAAGTCGCGCTCGGCGACGCGTCG TACAAGTGGACGGCTGCAGACATTGGTGGGCTGCATCGGGACGGCAGCTG CGACGTCGTCACCCGGGCTTTCGTCGCCGAATCTGCGGACCACCCGAAAG GGGCCGAAACCGCTAACAGCGGCAAAATTGCCAACGGCAGAGTCGGCAGC AGGGCAGCGACGACAGCGATGACGAACGGTGGCGGCGGCGGCAGCACGCC AGCCGAGGCGTCGGCGGAATCGGCGGTGGTGGCGGCGGCAAGCGGCAGCG GCGTCGACGCAGCAGCGGCAATAGCAGCGTGCCTTCGCAGCGACCGCGAC GACGGCCTCATCACGACGGTTGTGGTCGACGCCAGCGGCGTCGCTTTGGG CCTCGTCTACTCCAACGCCGCTTCGATCGCGGCATCGCTCGCCGCTGGCC GCGGCATCTACTGGTCCCGCTCGCGTGGCGGCATCTGGCGCAAGGGCGAC ACGAGCGGGGCGTGGCAGGCGCTGCTCGGCGTTTCGCTCGACTGCGACTC GGACGCGCTCCGCTTCGTCGTCGAACAACACGGCAACCCGCCGGCCTTCT GCCACCTCAACCGACGTGCCTGCTGGCCCGGCGGCGGCGGCGGTGGTTCC GGCGTCGCGGCCGGCGGCGCCTTCGACGGCGGGCTCGGCCACCTGGAGCG GACGCTACGCGGGCGACTGCGCGACTCGCCGCCGGGGTCGTACACCGCGC GGCTGTTTGCGGACCCGGCGCTGCTCCGGAACAAGCTCGTGGAGGAGGCT CAGGAGCTGGCCGAGGCGACCGCGACCGACCACGTTGCCTCCGAGGTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15938:160..1557+

>mRNA_P-wetherbeei_contig15938.1.1 ID=mRNA_P-wetherbeei_contig15938.1.1|Name=mRNA_P-wetherbeei_contig15938.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1347bp|location=Sequence derived from alignment at P-wetherbeei_contig15938:160..1557+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCCTGCCGCTGCTGCCGCTACCAAAACTGCCGTCCGATGCCGATGG
CATGGCGGCACCCGACGAGGTCGTGAAGCGGCTATCCGTCGTGGGCGAGG
TCGTCTTCGACGGAGCGGAGCACATCGCAGCCATCGATGTCACGCGCTTC
AAGCCTCTTCTGCACGCCTGCGCATGCCGCGTCGGCACCTTTTCGTTCCC
GCCGCCAGCAGATGCCGACTGGACGGATGCCGCCGTCGCGTGGCTCGACT
TGGGGGCCCGGCGCATTGTCGTGCGCTTGAGAGAACATTCAGTGGAGGCA
GCGGAAGCCTTCTCCACGTGGGCGGGGCAACTCTCAGATTCAAGACGACG
ATTTGTGGTGTCACTGGCGTCGCGAGACTTTAGTACGGGAACTGGCGCCG
CTTCAACTTTTGAAGCCTTTTTGGTTTCAACGGCGACAGCAGTCTGCGAC
GGGCTGCGCTCCGCCACAGGCGCCGTGCATTTCGATCTTGACGGCTGCAG
TGTCTTGCAGTCGACGGCGACCGTGGCGGCGTTGGTGGGCCGTCTGCATG
GCAAGGAAGGGTCCGCCACATACCTTGAAGTCGCGCTCGGCGACGCCTGC
GACGTCGTCACCCGGGCTTTCGTCGCCGAATCTGCGGACCACCCGAAAGG
GGCCGAAACCGCTAACAGCGGCAAAATTGCCAACGGCAGAGTCGGCAGCA
GGGCAGCGACGACAGCGATGACGAACGGTGGCGGCGGCGGCAGCACGCCA
GCCGAGGCGTCGGCGGAATCGGCGGTGGTGGCGGCGGCAAGCGGCAGCGG
CGTCGACGCAGCAGCGGCAATAGCAGCGTGCCTTCGCAGCGACCGCGACG
ACGGCCTCATCACGACGGTTGTGGTCGACGCCAGCGGCGTCGCTTTGGGC
CTCGTCTACTCCAACGCCGCTTCGATCGCGGCATCGCTCGCCGCTGGCCG
CGGCATCTACTGGTCCCGCTCGCGTGGCGGCATCTGGCGCAAGGGCGACA
CGAGCGGGGCGTGGCAGGCGCTGCTCGGCGTTTCGCTCGACTGCGACTCG
GACGCGCTCCGCTTCGTCGTCGAACAACACGGCAACCCGCCGGCCTTCTG
CCACCTCAACCGACGTGCCTGCTGGCCCGGCGGCGGCGGCGGTGGTTCCG
GCGTCGCGGCCGGCGGCGCCTTCGACGGCGGGCTCGGCCACCTGGAGCGG
ACGCTACGCGGGCGACTGCGCGACTCGCCGCCGGGGTCGTACACCGCGCG
GCTGTTTGCGGACCCGGCGCTGCTCCGGAACAAGCTCGTGGAGGAGGCTC
AGGAGCTGGCCGAGGCGACCGCGACCGACCACGTTGCCTCCGAGGTA
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