mRNA_P-wetherbeei_contig15938.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A835ZKL0_9STRA (PRA-CH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKL0_9STRA) HSP 1 Score: 301 bits (770), Expect = 4.700e-94 Identity = 219/454 (48.24%), Postives = 274/454 (60.35%), Query Frame = 1
Query: 1 MLLPLLPLPKLPSDADGMAAPDEV--VKRLSVVGEVVFDGAEHIAAIDVTRFKPLLHACACRVGTFSFPPP--ADADWTDAAVAWLDLGARRIVVRLREHSVEAAEAFSTWAGQLSDSRRRFVVSLASRDFSTGTGAASTFEAFLVSTATAVCDGLRSATGAVHFDLDGCSVLQSTAT-VAALVGRLHGKEGSATYLEVALGDACDVVTRAFVAESADHPK-GAETANSGKIANGRVGSRAATTAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
M++PL+ +P P+D + A ++V ++RL V+G+V GA H A T + PLL C CRVG F D TDA V+WLD GARR V+ +++ + AA A + W QL D+R R V+ + S + + EA + + + + L +A + FD+ V TAT +A L+ L GKEGSA YLE+ + D +T + + + H + G + + + S AT XXXXXXXXXXXXX + ACLRSDR DGLI TVV D GVALGLVYSNA S+AAS+A GRG+YWSRSRGG+WRKGDTSGAWQALL +S+DCDSDALRF+V QHG PPAFCH NRRACW G +GGLG LERTL R +P GSYTARLF+D ALLRNKLVEEAQELAEA A D VASE
Sbjct: 1 MIIPLVQVP--PTDGSAVTA-EQVPELRRLHVIGDVHLAGAAHDAH---TSYAPLLAQCGCRVGPFGAEDGFLEDDAITDAIVSWLDKGARRAVLHMQQPAASAA-ALAAWTQQLPDARSRLVLQVQSSNLGSS-------EAEIAAALPPLIESLSTAVCTMQFDMAESPV---TATRLAQLLKPLRGKEGSAAYLELVFCNV-DQLTTSLIGQL--HKEFGIDVVAPCHVESVPDPSDTATPXXXXXXXXXXXXXXXXQDVAAA-------------VFACLRSDRPDGLIPTVVCDECGVALGLVYSNAQSVAASIACGRGVYWSRSRGGLWRKGDTSGAWQALLALSMDCDSDALRFLVVQHGAPPAFCHFNRRACWAG--------------EGGLGALERTLAARRASAPAGSYTARLFSDAALLRNKLVEEAQELAEAQAPDDVASE 407
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A6H5L2R7_9PHAE (PRA-CH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R7_9PHAE) HSP 1 Score: 243 bits (620), Expect = 4.160e-72 Identity = 185/408 (45.34%), Postives = 221/408 (54.17%), Query Frame = 1
Query: 202 PPADADWTDAAVAWLDLGARRIVVRLREHSVEAAEAFSTWAGQLSDSRRRFVVSLASRDFSTGTGAASTFEAFLVSTATAVCDGLRSATGAVHFDLDGCSVLQSTATVAALVGRLHGKEGSATYLEVALGDACDVVTRA-----FVAESADHPKGAETANSGKIANGRVGSRAATTAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIA--ACLRSDRDDGLITTVVVDASGVALGL--------------------VYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
P A+ + TDA VAWLD GARR++V L A + + W+ QL SR R V S +RD G E+ AV DGLR V D +G V V +G + GKEG+ Y+EV V TR+ + N+G G +G + XXXXXXXXXXXXXXXXX A ACLR+DR DGL+TTVV D G+ALGL VYSN++SI AS+ +GRG+YWSRSRGG+WRKGDTSGAWQ L G+++DCDSDA++F V QHG+PPAFCH NRR CW + GLGHLER L R +P GSYT RLF DP LLRNKLVEEAQELAEA HVA E
Sbjct: 2 PKANGE-TDAVVAWLDSGARRVIVALDVSDPGAVQGLADWSTQLPASRHRLVASFRARDLRMDAGGGGLGESLR-----AVMDGLRPVVSCVQVDFEG--VYAVAPQVLKELGGVRGKEGAPGYMEV-------VFTRSPAPAPXXXXXXXXXXXXSSGNTGWSPEG-IGKLHHEYGVDVQCPATLSLEGXXXXXXXXXXXXXXXXXVDAVSAFLACLRTDRPDGLMTTVVCDTMGIALGLQPLPPPPNSCTPNLRTPPSKVYSNSSSIRASIESGRGVYWSRSRGGLWRKGDTSGAWQELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWE--------------EERGLGHLERMLVKRKEQAPEGSYTKRLFEDPVLLRNKLVEEAQELAEAETKQHVAEE 379
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: D8LDR4_ECTSI (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR4_ECTSI) HSP 1 Score: 221 bits (563), Expect = 1.730e-63 Identity = 184/453 (40.62%), Postives = 223/453 (49.23%), Query Frame = 1
Query: 22 LPKLPSDADGMAAPDEVVKRLSVVGEVVFDGAEHIAAIDVTRFKPLLHACACRVGTFS-FPPPADADWTDAAVAWLDLGARRIVVRLREHSVEAAEAFSTWAGQLSDSRRRFVVSLASRDFSTGTGAASTFEAFLVSTATAVCDGLRSATGAVHFDLDGCSVLQSTATVAALVGRLHGKEGSATYLEVALGDACDVVTRAFVAESADHPKGAETANSGKIANGRVG-----------SRAATTAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
LP + +D D + RL+ + E+V A V FK L ACRVG F DA+ TDA VAWLD GARR++V L A + + W+ QL SR R V S +RD G EA V DGLR V D +G + V +G + GKEG+ Y+EV V TR+ A N+ ++G G XXXXXXXXXXXXXXXXXXX CLR+DR DGL+TTVV D G+ALGLVYSN+ SI AS+ +GRG+YWSRSRGG+WRKGDTSGAWQ L G+++DCDSDA++F V QHG+PPAFCH NRR CW + GLGHLER L R +AQELAEA HVA E
Sbjct: 3 LPVIVNDGQSPPRADALTTRLAALSELVIQLPSGGGAGMVAGFKAFLGEFACRVGPFDVLAGDRDAN-TDAVVAWLDSGARRVIVALDVSDPGAVQGLADWSTQLPASRHRLVASFRARDLRMDAGGGGLGEALRT-----VMDGLRPVVSCVQVDFEGAYA--AAPQVLKELGGVRGKEGAPGYMEV-------VFTRSPAPAPAXXXXXXXXXNN---SSGNTGWSPEGIGKLHHEYGVDVQCPATLSLEGXXXXXXXXXXXXXXXXXXXVDAVSAFLTCLRTDRPDGLMTTVVCDTMGIALGLVYSNSTSIRASIESGRGVYWSRSRGGLWRKGDTSGAWQELRGITVDCDSDAIKFTVWQHGSPPAFCHFNRRNCWE--------------EERGLGHLERMLVKR--------------------------KAQELAEAETKQHVAEE 397
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7S2V4U4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4U4_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.120e-61 Identity = 113/173 (65.32%), Postives = 126/173 (72.83%), Query Frame = 1
Query: 826 ACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
AC R+DR DGL TTVVVD GVALGLVYSNA S+ AS AA RG+YWSRSRGG+WRKGDTSGA Q L G+S+DCDSDAL F V+Q G+PPAFCHLNRR CW G G+G LERTL RL ++P GSYT RLF DPALLRNKL+EE QEL EA VA+E
Sbjct: 223 ACCRTDRPDGLFTTVVVDECGVALGLVYSNALSVKASFAAKRGVYWSRSRGGLWRKGDTSGAVQELKGISIDCDSDALCFRVDQKGDPPAFCHLNRRTCWDAGR--------------GIGKLERTLTQRLANAPAGSYTKRLFDDPALLRNKLLEEVQELVEAETVGDVAAE 381
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7S0E3V5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E3V5_9EUKA) HSP 1 Score: 205 bits (522), Expect = 2.220e-60 Identity = 108/175 (61.71%), Postives = 128/175 (73.14%), Query Frame = 1
Query: 820 IAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
+ +C R+DR DGL+TTVV + GVALGLVYSN AS+AA++ AGRG+Y SRS+GG+WRKGDTSGA+Q LL V LDCD DA+RF V QHG+PPAFCH +CW G A+G L LE+TL R ++PPGSYTARLF D LLR KLVEEAQELAEAT DH A+E
Sbjct: 16 LGSCARTDRTDGLMTTVVAEEGGVALGLVYSNPASLAAAVEAGRGVYHSRSKGGLWRKGDTSGAYQTLLRVELDCDHDAIRFTVSQHGDPPAFCHKQSLSCW--------GPASG------LRDLEKTLVKRKSNAPPGSYTARLFGDADLLRKKLVEEAQELAEATEPDHAAAE 176
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A0G4HM72_9ALVE (PRA-CH domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HM72_9ALVE) HSP 1 Score: 213 bits (542), Expect = 3.000e-60 Identity = 111/174 (63.79%), Postives = 127/174 (72.99%), Query Frame = 1
Query: 823 AACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
AA L+SDR DGL TTVV D SGVALGLVYSN S+ A++ RG+YWSRSRGG+WRKGDTSGAWQ LL + +DCD DA+RF V Q G PPAFCHL RR CW AAG L LE TL+GRL+ +P GSYT RLF DP LLR+KL+EEAQEL+EAT DHVA+E
Sbjct: 257 AATLKSDRPDGLFTTVVCDESGVALGLVYSNVQSLHAAVECMRGVYWSRSRGGLWRKGDTSGAWQGLLSIDVDCDRDAIRFRVVQQGEPPAFCHLQRRTCWS--------AAAG------LRALEETLKGRLKTAPAGSYTKRLFEDPQLLRHKLLEEAQELSEATEKDHVAAE 416
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7S2WIY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIY7_9STRA) HSP 1 Score: 210 bits (535), Expect = 9.990e-60 Identity = 109/173 (63.01%), Postives = 120/173 (69.36%), Query Frame = 1
Query: 826 ACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
ACLR+DR DGL TTVV D GVALGLVYSN SI A++ RG+YWSRSRGG+WRKGDTSGAWQ L + DCDSDALRF V QHG+PPAFCH N R CW GGL LE+TL R +P GSYT RLF DP LLRNKL+EEAQEL EA DHVA+E
Sbjct: 211 ACLRTDRSDGLYTTVVADQCGVALGLVYSNPESIRAAVCCSRGVYWSRSRGGLWRKGDTSGAWQDLFLIQADCDSDALRFTVHQHGSPPAFCHRNCRTCW--------------GPHGGLTELEQTLAERRASAPAGSYTKRLFEDPELLRNKLLEEAQELIEAEEPDHVAAE 369
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7S2DG90_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DG90_9EUKA) HSP 1 Score: 206 bits (525), Expect = 2.040e-57 Identity = 105/175 (60.00%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 820 IAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
+AAC+R+DR DGL T+V + G ALGLVYS+ ASI A+L+ GRG+YWSRSR +WRKGDTSGAWQ L + LDCD DAL F V QHG PPAFCH + +CW GL HL+ LR R +PPGSYT RLF D LLRNKLVEEAQELAEAT DHVASE
Sbjct: 285 VAACIRTDRSDGLFPTLVAEEDGAALGLVYSSTASIGAALSCGRGVYWSRSRQALWRKGDTSGAWQTLKRIRLDCDGDALCFTVTQHGEPPAFCHKSSLSCW--------------GLPSGLHHLQMVLRQRKASAPPGSYTKRLFDDSTLLRNKLVEEAQELAEATEPDHVASE 445
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7S4AZF9_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4AZF9_CHRCT) HSP 1 Score: 199 bits (505), Expect = 2.350e-57 Identity = 105/175 (60.00%), Postives = 125/175 (71.43%), Query Frame = 1
Query: 820 IAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
+AA RSDR D L T++V +ASG ALGLVYS+ SI ++ GRGIYWSRSRG +W+KGD+SGAWQ L+ + +DCDSDALRFVV Q+G PPAFCH CW G A G + L+ TL+ RLR++PPGSYT RLF DP LLR KLVEEAQELAEAT DHVA+E
Sbjct: 22 LAAVARSDRPDELYTSLVEEASGPALGLVYSSDVSIKEAVRRGRGIYWSRSRGSLWQKGDSSGAWQHLVRIDIDCDSDALRFVVRQYGEPPAFCHRKTLTCW--------GHATG------IRELQETLQSRLRNAPPGSYTKRLFDDPDLLRQKLVEEAQELAEATDADHVAAE 182
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Match: A0A7R9UQV6_DIALT (Hypothetical protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UQV6_DIALT) HSP 1 Score: 200 bits (509), Expect = 4.500e-56 Identity = 107/175 (61.14%), Postives = 125/175 (71.43%), Query Frame = 1
Query: 820 IAACLRSDRDDGLITTVVVDASGVALGLVYSNAASIAASLAAGRGIYWSRSRGGIWRKGDTSGAWQALLGVSLDCDSDALRFVVEQHGNPPAFCHLNRRACWPGGXXXXXGVAAGGAFDGGLGHLERTLRGRLRDSPPGSYTARLFADPALLRNKLVEEAQELAEATATDHVASE 1344
+ AC R+DR DGL+TTVVVD GV LGLVYS+A S+ S+ AGRGIY+SRSR +WRKGDTSGA Q L + +DCDSDALRF V Q G PPAFCHL R CW G A G L L+RTL+ RL +P GSY+A+LFADP LLR+KL+EEAQEL EAT DHVA+E
Sbjct: 161 LVACARTDRADGLLTTVVVDEGGVCLGLVYSSAESVQESVRAGRGIYFSRSRNSLWRKGDTSGATQELQRIEVDCDSDALRFTVRQLGEPPAFCHLGTRTCW--------GEARG------LHALQRTLQARLASAPAGSYSAKLFADPTLLRHKLLEEAQELIEATEPDHVAAE 321 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15938.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15938.1.1 >prot_P-wetherbeei_contig15938.1.1 ID=prot_P-wetherbeei_contig15938.1.1|Name=mRNA_P-wetherbeei_contig15938.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=449bp MLLPLLPLPKLPSDADGMAAPDEVVKRLSVVGEVVFDGAEHIAAIDVTRFback to top mRNA from alignment at P-wetherbeei_contig15938:160..1557+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15938.1.1 ID=mRNA_P-wetherbeei_contig15938.1.1|Name=mRNA_P-wetherbeei_contig15938.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1398bp|location=Sequence derived from alignment at P-wetherbeei_contig15938:160..1557+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15938:160..1557+ >mRNA_P-wetherbeei_contig15938.1.1 ID=mRNA_P-wetherbeei_contig15938.1.1|Name=mRNA_P-wetherbeei_contig15938.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1347bp|location=Sequence derived from alignment at P-wetherbeei_contig15938:160..1557+ (Phaeothamnion wetherbeei SAG_119_79)back to top |