mRNA_P-wetherbeei_contig1593.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1593.2.1
Unique NamemRNA_P-wetherbeei_contig1593.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Match: A0A6V1KFW8_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KFW8_HETAK)

HSP 1 Score: 155 bits (392), Expect = 4.870e-47
Identity = 71/106 (66.98%), Postives = 83/106 (78.30%), Query Frame = 1
Query:   13 GCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPFQFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANATLIFEMELLSF 330
            G  V TI PGDATN+PQ  +T  +HYVG L DGT FDSSR RGRPF+F++G+G VIRAWDE V QMS GQ+ +LT   +YAYGA GYPPVIP N+TLIFE+ELL F
Sbjct:    2 GVEVETITPGDATNFPQQGNTVRVHYVGTLTDGTEFDSSRSRGRPFEFQLGMGMVIRAWDEGVAQMSKGQVAKLTCSPDYAYGARGYPPVIPPNSTLIFEVELLDF 107          
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Match: W2JKM9_PHYPR (Peptidylprolyl isomerase n=9 Tax=Phytophthora TaxID=4783 RepID=W2JKM9_PHYPR)

HSP 1 Score: 150 bits (378), Expect = 6.620e-45
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 1
Query:   13 GCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPFQFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANATLIFEMELLSFH 333
            G  + TIK GD TN+P+   T S+HYVG L DG+ FDSSR RGRPFQF++G G VIR WDE V +MS GQ+ +LT P EYAYG  GYPPVIP  ATLIFE+ELLSF+
Sbjct:    2 GFQIDTIKAGDGTNFPKPGQTVSVHYVGTLTDGSKFDSSRDRGRPFQFQLGAGQVIRGWDEGVAKMSKGQVAKLTLPHEYAYGERGYPPVIPPKATLIFEVELLSFN 108          
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Match: K3WDT7_GLOUD (Peptidylprolyl isomerase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WDT7_GLOUD)

HSP 1 Score: 149 bits (376), Expect = 1.340e-44
Identity = 67/107 (62.62%), Postives = 83/107 (77.57%), Query Frame = 1
Query:   13 GCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPFQFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANATLIFEMELLSFH 333
            G  + TIK GD TN+P+A +T  +HYVG L +G+ FDSSR RGRPF+FK+G G VIR WDE V +MS+GQI +LT P EYAYG +GYPP+IP  ATLIFE+ELL F+
Sbjct:    2 GFEIDTIKAGDGTNFPKAGNTVKVHYVGTLTNGSKFDSSRDRGRPFEFKLGAGQVIRGWDEGVAKMSLGQIAKLTLPHEYAYGEHGYPPIIPPKATLIFEVELLGFN 108          
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Match: UPI001BD59F3C (peptidyl-prolyl cis-trans isomerase FKBP1A-like n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD59F3C)

HSP 1 Score: 147 bits (371), Expect = 7.480e-44
Identity = 66/105 (62.86%), Postives = 80/105 (76.19%), Query Frame = 1
Query:   13 GCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPFQFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANATLIFEMELLS 327
            G  V+T+KPGD  N+PQ   T ++HYVG L +G  FDSSR R  PFQFK+G G VIRAWDE V QMSVG++ +LT   +YAYG +GYPPVIP NATLIFE+ELL+
Sbjct:    2 GVEVQTLKPGDGVNFPQRGRTVTVHYVGTLTNGKKFDSSRDRAEPFQFKIGKGEVIRAWDEGVAQMSVGEVAKLTCSPDYAYGCSGYPPVIPPNATLIFEVELLA 106          
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Match: A0A6P7K152_9TELE (Peptidylprolyl isomerase n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7K152_9TELE)

HSP 1 Score: 147 bits (370), Expect = 1.100e-43
Identity = 65/105 (61.90%), Postives = 79/105 (75.24%), Query Frame = 1
Query:   13 GCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPFQFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANATLIFEMELLS 327
            G  V TI+PGD  +YPQ   T ++HYVG L +GT FDSSR RG PF+FK+G G VIR WDE V QMS+GQ+  LT   +YAYG+ GYPP+IPAN+TLIFE+ELL 
Sbjct:    2 GVDVETIRPGDGHSYPQKGQTVTVHYVGTLTNGTKFDSSRDRGTPFKFKLGAGQVIRGWDEGVAQMSIGQVARLTCSPDYAYGSKGYPPIIPANSTLIFEVELLK 106          
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Match: A0A1A8FIZ3_9TELE (Peptidylprolyl isomerase n=3 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A8FIZ3_9TELE)

HSP 1 Score: 146 bits (368), Expect = 2.210e-43
Identity = 65/107 (60.75%), Postives = 77/107 (71.96%), Query Frame = 1
Query:   13 GCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPFQFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANATLIFEMELLSFH 333
            G  V T++PGD  N+P    T  +HYVG L +G  FDSSR RG PFQFK+G G VIR WDE V QMS+GQ+  LT   +YAYG+ GYPPVIP N+TLIFE+ELL FH
Sbjct:    2 GVEVETLRPGDGQNFPPRGRTVVVHYVGTLTNGKKFDSSRDRGEPFQFKLGAGEVIRGWDEGVAQMSLGQVARLTVSPDYAYGSRGYPPVIPPNSTLIFEVELLKFH 108          
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Match: A0A3P8U8V5_AMPPE (Peptidylprolyl isomerase n=2 Tax=Amphiprion TaxID=80969 RepID=A0A3P8U8V5_AMPPE)

HSP 1 Score: 145 bits (366), Expect = 4.320e-43
Identity = 65/106 (61.32%), Postives = 77/106 (72.64%), Query Frame = 1
Query:   13 GCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPFQFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANATLIFEMELLSF 330
            G  V  IKPGD  NYP+  H  ++HYVG L DG  FDSSR RG PF+F++G G VIR WDE V +MS G++  LT   +YAYGA GYPP+IPANATLIFE+ELL F
Sbjct:    2 GVDVEVIKPGDGQNYPKKGHKVTVHYVGTLPDGRKFDSSRDRGEPFEFRLGEGEVIRGWDEGVARMSRGELARLTCSPDYAYGARGYPPIIPANATLIFEVELLKF 107          
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Match: H3G8A5_PHYRM (Peptidylprolyl isomerase n=13 Tax=Peronosporaceae TaxID=4777 RepID=H3G8A5_PHYRM)

HSP 1 Score: 145 bits (365), Expect = 6.330e-43
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:   13 GCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPFQFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANATLIFEMELLSFH 333
            G  + TIK GD  ++P+   T S+HYVG L DG+ FDSSR RGRPFQF++G G VIR WDE V +MS GQ+ +LT P +YAYG  GYPPVIP  ATLIFE+ELLSF+
Sbjct:    2 GFQIDTIKAGDGVSFPKPGQTVSVHYVGTLTDGSKFDSSRDRGRPFQFELGAGQVIRGWDEGVAKMSKGQVAKLTLPHDYAYGERGYPPVIPPRATLIFEVELLSFN 108          
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Match: A0A8K1CD50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD50_PYTOL)

HSP 1 Score: 144 bits (364), Expect = 9.260e-43
Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 1
Query:   13 GCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPFQFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANATLIFEMELLSF 330
            G  + TIKPGD  N+P+  +T  +HYVG L +G  FDSSR RGRPF+FK+G G VIR WDE V  +S GQ+ +LT P EYAYG  GYPP+IP  ATLIFE+EL+SF
Sbjct:    3 GFDIETIKPGDGVNFPKPGNTVRVHYVGTLTNGNKFDSSRDRGRPFEFKLGAGQVIRGWDEGVALLSKGQVAKLTLPFEYAYGEQGYPPIIPPRATLIFEVELISF 108          
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Match: A0A2I4C1F4_9TELE (Peptidylprolyl isomerase n=2 Tax=Rivulidae TaxID=28771 RepID=A0A2I4C1F4_9TELE)

HSP 1 Score: 144 bits (363), Expect = 1.240e-42
Identity = 65/105 (61.90%), Postives = 81/105 (77.14%), Query Frame = 1
Query:   13 GCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPFQFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANATLIFEMELLS 327
            G  V TI+PGD   +P+   T ++HYVG L +G  FDSSR RG+PF+FK+G G VIRAWDE V QMS+GQ+ +LT   +YAYGA+GYPP+IPANATLIFE+ELL 
Sbjct:    2 GVHVETIRPGDGRTFPKKGSTVAVHYVGTLTNGQKFDSSRDRGKPFKFKLGEGEVIRAWDEGVAQMSLGQMAKLTCSPDYAYGASGYPPIIPANATLIFEVELLQ 106          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1593.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1KFW8_HETAK4.870e-4766.98Peptidylprolyl isomerase n=1 Tax=Heterosigma akash... [more]
W2JKM9_PHYPR6.620e-4564.49Peptidylprolyl isomerase n=9 Tax=Phytophthora TaxI... [more]
K3WDT7_GLOUD1.340e-4462.62Peptidylprolyl isomerase n=2 Tax=Pythiaceae TaxID=... [more]
UPI001BD59F3C7.480e-4462.86peptidyl-prolyl cis-trans isomerase FKBP1A-like n=... [more]
A0A6P7K152_9TELE1.100e-4361.90Peptidylprolyl isomerase n=1 Tax=Parambassis ranga... [more]
A0A1A8FIZ3_9TELE2.210e-4360.75Peptidylprolyl isomerase n=3 Tax=Nothobranchiidae ... [more]
A0A3P8U8V5_AMPPE4.320e-4361.32Peptidylprolyl isomerase n=2 Tax=Amphiprion TaxID=... [more]
H3G8A5_PHYRM6.330e-4361.68Peptidylprolyl isomerase n=13 Tax=Peronosporaceae ... [more]
A0A8K1CD50_PYTOL9.260e-4360.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2I4C1F4_9TELE1.240e-4261.90Peptidylprolyl isomerase n=2 Tax=Rivulidae TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1593contigP-wetherbeei_contig1593:1063..1887 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog42099.EPrPV00000022933
PFAMsFKBP_C
Model size336
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.35e-47
EggNOG OGsCOG0545@1|root,KOG0544@2759|Eukaryota,1MHK6@121069|Pythiales
Ec32 ortholog descriptionFKBP domain protein
Ec32 orthologEc-06_002180.1
DescriptionFKBP-type peptidyl-prolyl cis-trans isomerase. Source PGD
Cds size336
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186071.6397142-CDS-P-wetherbeei_contig1593:1062..11041683186071.6397142-CDS-P-wetherbeei_contig1593:1062..1104Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1593 1063..1104 +
1683186071.6502388-CDS-P-wetherbeei_contig1593:1222..12791683186071.6502388-CDS-P-wetherbeei_contig1593:1222..1279Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1593 1223..1279 +
1683186071.6590607-CDS-P-wetherbeei_contig1593:1482..15671683186071.6590607-CDS-P-wetherbeei_contig1593:1482..1567Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1593 1483..1567 +
1683186071.6684859-CDS-P-wetherbeei_contig1593:1735..18871683186071.6684859-CDS-P-wetherbeei_contig1593:1735..1887Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1593 1736..1887 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1593.2.1prot_P-wetherbeei_contig1593.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1593 1063..1887 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1593.2.1

>prot_P-wetherbeei_contig1593.2.1 ID=prot_P-wetherbeei_contig1593.2.1|Name=mRNA_P-wetherbeei_contig1593.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=112bp
MGDSGCTVRTIKPGDATNYPQANHTASMHYVGRLEDGTVFDSSRRRGRPF
QFKVGVGSVIRAWDETVPQMSVGQIVELTAPAEYAYGANGYPPVIPANAT
LIFEMELLSFH*
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mRNA from alignment at P-wetherbeei_contig1593:1063..1887+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1593.2.1 ID=mRNA_P-wetherbeei_contig1593.2.1|Name=mRNA_P-wetherbeei_contig1593.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig1593:1063..1887+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGACTCCGGCTGTACGGTCCGGACAATCAAGCCCGGGGTGCGTCC CTAGCCGAGACCCGGCGTCTTTCCTGGTTTCCTTCCATCCTTGAAGCACC CACCTGACACACACGCGACATCCGCCTTCCTCCCGCGTTTGCATTGCATG AACTTTGCAGGACGCGACGAACTACCCTCAGGCGAACCATACTGCCAGCA TGCACTACGTTGGCAGGGTAAGACTCTCCAGTCCTTTGCAAAACTATCCA CCGCTTGTCCTGATCTTCCATATTTTACTTTCTGACCTGCTTTTGCGCGT ACGAGCGTCTCTCTGCGTACGGTTTAGGTACCTACGACTTCTCGGTGCTA TCTTTCAGACCCTACACATGGACTTCTTCACTACTGGCTGTTTTCCCACT CGTTTTTCGCCTTTCTGCAGCTAGAGGACGGCACTGTGTTCGACTCTAGC CGAAGACGCGGACGACCTTTCCAGTTCAAGGTGGGCGTCGGTTCCGTTAT TCGAGGTAAGCGGAGACTTTTCGCTGTTCTCTGTTCCTAAGCCCGGCAGA GATATGCCAAAAGCGTTCTTAAATCGCAAAAATTCTCTGCACGCTATTGC TCGCTTCGGTTGTTTTGCTTCACATCACCTGCCCTCCCTGGCATCCTCCT TTTCCTTCCTTTTCGGAGAGCAGCCTGGGATGAGACTGTGCCGCAGATGA GCGTTGGTCAGATCGTCGAGCTCACCGCGCCGGCCGAGTACGCGTACGGC GCCAACGGCTACCCGCCGGTGATTCCAGCCAACGCCACGCTCATTTTCGA GATGGAACTTCTCAGCTTTCACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1593:1063..1887+

>mRNA_P-wetherbeei_contig1593.2.1 ID=mRNA_P-wetherbeei_contig1593.2.1|Name=mRNA_P-wetherbeei_contig1593.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig1593:1063..1887+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGACTCCGGCTGTACGGTCCGGACAATCAAGCCCGGGGACGCGAC
GAACTACCCTCAGGCGAACCATACTGCCAGCATGCACTACGTTGGCAGGC
TAGAGGACGGCACTGTGTTCGACTCTAGCCGAAGACGCGGACGACCTTTC
CAGTTCAAGGTGGGCGTCGGTTCCGTTATTCGAGCCTGGGATGAGACTGT
GCCGCAGATGAGCGTTGGTCAGATCGTCGAGCTCACCGCGCCGGCCGAGT
ACGCGTACGGCGCCAACGGCTACCCGCCGGTGATTCCAGCCAACGCCACG
CTCATTTTCGAGATGGAACTTCTCAGCTTTCACTGA
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