mRNA_P-wetherbeei_contig1592.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Match: A0A835ZE64_9STRA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE64_9STRA) HSP 1 Score: 327 bits (837), Expect = 5.100e-108 Identity = 150/203 (73.89%), Postives = 176/203 (86.70%), Query Frame = 1
Query: 1 YIIVKNMDEAQYICNYILNGGNKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYKRETRNIGKLFESTLMQKFGPAAVGQHYMAFDTICDATQERQDAMLEMVEDKEIDLMLVVGGWDSSNTHHLAEIAVDRGFTTYWINRAECIKPDGSIEYMDPHTFAVVKKEKFLPAGKIAVGVTSGASTPDAYMEQALENIFLLKGL 609
YI+VK++ EAQY+ +YI+NGGNK EFL KF A+S GFDPD DL KVGLANQTTMYKR+TR IGK+FE LM K+GPAA+GQHYMAFDTICDATQERQDAMLE+VED EID+MLVVGGWDSSNTHHLAEI+++RG TYW+N+AEC+KPDGSI++ DPHT V+ FLP GK+ VG+TSGASTPDAYM+Q +ENIFLLK L
Sbjct: 246 YIVVKDLKEAQYVADYIVNGGNKEEFLAKFSMALSAGFDPDTDLQKVGLANQTTMYKRDTREIGKIFEKALMAKYGPAAIGQHYMAFDTICDATQERQDAMLELVEDPEIDIMLVVGGWDSSNTHHLAEISLNRGIPTYWVNKAECVKPDGSIDHKDPHTLEVINHPNFLPKGKVCVGLTSGASTPDAYMQQTVENIFLLKQL 448
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Match: D8LGB8_ECTSI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplast n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGB8_ECTSI) HSP 1 Score: 313 bits (802), Expect = 9.660e-103 Identity = 150/208 (72.12%), Postives = 182/208 (87.50%), Query Frame = 1
Query: 1 YIIVKNMDEAQYICNYILNGG-NKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYKRETRNIGKLFESTLMQKFGPAAVGQHYMAFDTICDATQERQDAMLEMVEDKEIDLMLVVGGWDSSNTHHLAEIAVDRGFTTYWINRAECIKPDGSIEYMDPHTFAVVKKEKFLPAGKIAVGVTSGASTPDAYMEQALENIFLLKGLGLAA 621
Y++VKNM EA+Y+ YI NGG +K EF+EKFK+A+SEGFDPDVDL KVGLANQTTMYKRETR+IGKLFE TLM+K+GPA VG+H+MAFDTICDATQERQDA+LE+VE+ EIDLMLVVGGWDSSNT HLAEI+ ++G T+W+N+A C+KPDGSI ++DPH+ ++ E FLPAG+I +GVTSGASTPDAYMEQA+ENI +LK L AA
Sbjct: 248 YLVVKNMAEAEYVAAYIANGGGDKAEFMEKFKNAMSEGFDPDVDLVKVGLANQTTMYKRETRDIGKLFEKTLMEKYGPAEVGEHWMAFDTICDATQERQDAILELVEE-EIDLMLVVGGWDSSNTQHLAEISANKGIPTFWVNKANCVKPDGSIAHVDPHSMEELRTENFLPAGEIVIGVTSGASTPDAYMEQAVENISMLKKLAAAA 454
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Match: W7TLS9_9STRA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLS9_9STRA) HSP 1 Score: 260 bits (665), Expect = 8.110e-82 Identity = 128/203 (63.05%), Postives = 164/203 (80.79%), Query Frame = 1
Query: 1 YIIVKNMDEAQYICNYILNGGNKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYKRETRNIGKLFESTLMQKFGPAAVGQHYMAFDTICDATQERQDAMLEMVEDKEIDLMLVVGGWDSSNTHHLAEIAVDRGFTTYWINRAECIKPDGSIEYMDPHTFAVVKKEKFLPAGKIAVGVTSGASTPDAYMEQALENIFLLKGL 609
YIIVK++ EA+Y+CNYI+NGG+K EF+EKFK+A+SEGFDPDVDL KVGLANQTTMYKRETR IGKLFE T+M K+GPA V HY FDTICDATQERQDA+ +++E+K +D +L+VGG+DSSNT HL EI + ++ I+RAE I DGSIE+ + ++VK FLP G + +GVTSGASTPDAY+++A+E +FLL+ L
Sbjct: 264 YIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEK-LDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDG-SIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRTL 464
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Match: A0A6U4E9P0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4E9P0_9STRA) HSP 1 Score: 253 bits (646), Expect = 1.900e-79 Identity = 127/205 (61.95%), Postives = 158/205 (77.07%), Query Frame = 1
Query: 1 YIIVKNMDEAQYICNYILNGGNKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYKRETRNIGKLFESTLMQKFGPAAVGQHYMAFDTICDATQERQDAMLEMVEDKEIDLMLVVGGWDSSNTHHLAEIAVDRGFTTYWINRAECIKPDGSIEY--MDPHTFAVVKKEKFLPAGKIAVGVTSGASTPDAYMEQALENIFLLKGL 609
Y+I+KN DEA+Y+ NYI+NGG+K EFLEKFK+A+SEGFDPD DL KVGLANQTTMYKRETR IG++ E LM KFG A +G Y FDTICDATQERQDA+ +++ED +D +L+VGG+DSSNT HL EI G +Y I+RAE I DGSIE+ +D ++V +E FLP GKI +GVTSGASTPDAY+ A++ I +LK L
Sbjct: 233 YLIMKNEDEAKYVANYIVNGGDKAEFLEKFKNAMSEGFDPDTDLEKVGLANQTTMYKRETRQIGRIMEKALMSKFGAADIGTRYAEFDTICDATQERQDAITDLIEDGSMDFILIVGGFDSSNTAHLKEIPELAGIKSYHIDRAERILADGSIEHRLLDG---SIVTEENFLPEGKITIGVTSGASTPDAYLGDAVDRILMLKKL 434
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Match: A0A7S3UT78_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT78_HETAK) HSP 1 Score: 252 bits (643), Expect = 8.310e-79 Identity = 118/203 (58.13%), Postives = 160/203 (78.82%), Query Frame = 1
Query: 1 YIIVKNMDEAQYICNYILNGGNKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYKRETRNIGKLFESTLMQKFGPAAVGQHYMAFDTICDATQERQDAMLEMVEDKEIDLMLVVGGWDSSNTHHLAEIAVDRGFTTYWINRAECIKPDGSIEYMDPHTFAVVKKEKFLPAGKIAVGVTSGASTPDAYMEQALENIFLLKGL 609
Y+IVK++ EA+Y+CNY++NGG+K EF+ KFK+A+S+GFDPD DL KVGLANQTTMYK+ETR IG+L + T+M+ GP +G+ Y+ FDTICDATQERQDA+ E++ D+ +D +LVVGGWDSSNT HL EI + G Y ++R++ I+PDGSIE+ A+ +E FLP G + +G+TSGASTPDAY+++ L+ IFLLK L
Sbjct: 246 YLIVKDIKEAEYVCNYVINGGDKEEFMAKFKNAMSKGFDPDKDLGKVGLANQTTMYKKETRAIGQLLQKTMMRAHGPEKIGETYIEFDTICDATQERQDAIQELLADESLDFILVVGGWDSSNTAHLLEIPIHAGKRAYHVDRSDRIRPDGSIEHRTVDG-AIEVQENFLPKGPVRLGITSGASTPDAYVQKCLDQIFLLKSL 447
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Match: A0A7S0MIF1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MIF1_9CRYP) HSP 1 Score: 251 bits (640), Expect = 2.540e-78 Identity = 123/204 (60.29%), Postives = 159/204 (77.94%), Query Frame = 1
Query: 1 YIIVKNMDEAQYICNYILNGGNKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYKRETRNIGKLFESTLMQKFGPAAVGQHYMAFDTICDATQERQDAMLEMVEDKEIDLMLVVGGWDSSNTHHLAEIAVDRGFTTYWINRAECIKPDGSIEYMDPHTFAVVKKEK-FLPAGKIAVGVTSGASTPDAYMEQALENIFLLKGL 609
Y+IVK++ EA+Y+ +YILNGG+K EF+ KFK+A+SEGFDPD DL KVG+ANQTTMYK ET I KLFE T+++KFGP V H+M+ DTICDATQERQDA+ E+++DK +DL+LV+GG+DSSNT HL EIA RG Y I+ A I+PDGSIE+ H ++ FLPAG++ VGVTSGASTPDA +E+ +E +FLLK +
Sbjct: 252 YLIVKDIHEAEYVADYILNGGDKAEFMRKFKNAMSEGFDPDTDLDKVGIANQTTMYKEETAAIAKLFERTMLRKFGPQEVNSHFMSLDTICDATQERQDAISELLDDKSLDLVLVIGGFDSSNTGHLLEIAEMRGVRAYHIDLASRIRPDGSIEHR--HVDGTIEVTPGFLPAGRVTVGVTSGASTPDATVEEVMEQLFLLKAV 453
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Match: A0A7S1XHR3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XHR3_9RHOD) HSP 1 Score: 247 bits (630), Expect = 8.350e-78 Identity = 119/207 (57.49%), Postives = 157/207 (75.85%), Query Frame = 1
Query: 1 YIIVKNMDEAQYICNYILNGGNKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYKRETRNIGKLFESTLMQKFGPAAVGQHYMAFDTICDATQERQDAMLEMVEDKEIDLMLVVGGWDSSNTHHLAEIAVDRGFTTYWINRAECIKPDGSIEYMDP----HTFAVVKKEKFLPAGKIAVGVTSGASTPDAYMEQALENIFLLKGL 609
Y+I+ N++EA+Y+CNYILNGG++ EFL+KFK+AIS+GFDPDVDL VG+ANQTTM K ET IGKLFE T+MQ++G A +G+ ++AF+TICDATQERQDAM E+V + + D+MLV+GG++SSNT HL EIA G T+YW+N +CI P SI Y HT + FLPAG++ + VTSGASTPD +E LEN+F++ L
Sbjct: 169 YLIILNLEEAKYVCNYILNGGDREEFLQKFKNAISDGFDPDVDLGAVGIANQTTMLKGETEEIGKLFEKTMMQRYGVAEIGKRFVAFNTICDATQERQDAMYELVREPQ-DIMLVIGGFNSSNTSHLQEIAEHAGLTSYWVNAPDCIGPGNSIRYRTSDGTEHTL-----DNFLPAGEVTIAVTSGASTPDKVVEDCLENVFMIHKL 369
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Match: L1JFG8_GUITC (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JFG8_GUITC) HSP 1 Score: 246 bits (627), Expect = 1.320e-76 Identity = 120/203 (59.11%), Postives = 151/203 (74.38%), Query Frame = 1
Query: 1 YIIVKNMDEAQYICNYILNGGNKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYKRETRNIGKLFESTLMQKFGPAAVGQHYMAFDTICDATQERQDAMLEMVEDKEIDLMLVVGGWDSSNTHHLAEIAVDRGFTTYWINRAECIKPDGSIEYMDPHTFAVVKKEKFLPAGKIAVGVTSGASTPDAYMEQALENIFLLKGL 609
YII+K+M+EA+Y+ NYILNGGNK EF+ KFK+A S GFDPD DL KVG+ANQTTMYK ET I KLFE T+++KFGP V H+MA DTICDATQERQDA+ +++ D +D L+VGGWDSSNT HL EI G Y I+ A I+ DGSIE+ + V K+ FLP GK+ VGVTSGASTPD Y+++++E + +LK L
Sbjct: 227 YIIIKDMEEAKYVTNYILNGGNKEEFMAKFKNACSSGFDPDRDLKKVGIANQTTMYKEETAAIAKLFERTMLKKFGPENVNVHFMALDTICDATQERQDAINDLIRDDSVDFYLIVGGWDSSNTGHLLEIVHMNGKVGYHIDMAHRIREDGSIEHRETDGTITVTKD-FLPKGKVTVGVTSGASTPDRYLQESVERVLMLKAL 428
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Match: A0A3B8YCP3_9CYAN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Cyanothece sp. UBA12306 TaxID=2055757 RepID=A0A3B8YCP3_9CYAN) HSP 1 Score: 243 bits (621), Expect = 5.010e-76 Identity = 123/208 (59.13%), Postives = 157/208 (75.48%), Query Frame = 1
Query: 1 YIIVKNMDEAQYICNYILNGGNKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYKRETRNIGKLFESTLMQKFGPAAVGQHYMAFDTICDATQERQDAMLEMVEDKEIDLMLVVGGWDSSNTHHLAEIAVDRGFTTYWINRAECIKPDGSIEYMDPHTFAVVKKEKFLPAGKIAVGVTSGASTPDAYMEQALENIFLLKGLGLAAE 624
Y+IV N+++A Y+CNYI+NGGNK EFL KFK+A SEGF+PD DL KVG+ANQTTM K ET IGKLFE T++ K+GPA + +H+M+F+TICDATQERQDAMLE+V +K IDLM+V+GG++SSNT HL EI V +G T+Y I+ IK + IE+ P + KE +LP G+I VGVTSGASTPD +E +E IF K LG + E
Sbjct: 198 YLIVLNLEQANYVCNYIINGGNKEEFLAKFKNAYSEGFNPDTDLEKVGIANQTTMLKSETEQIGKLFEKTMLNKYGPATLNEHFMSFNTICDATQERQDAMLELVNEK-IDLMVVIGGFNSSNTTHLQEIPVYQGITSYHIDHGNRIKANNCIEHK-PLGKELEIKENWLPDGQIVVGVTSGASTPDIIVEAVIEKIFETKNLGFSQE 403
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Match: A0A7S3A027_9RHOD (Hypothetical protein n=6 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A027_9RHOD) HSP 1 Score: 243 bits (621), Expect = 1.460e-75 Identity = 124/214 (57.94%), Postives = 160/214 (74.77%), Query Frame = 1
Query: 1 YIIVKNMDEAQYICNYILNGGNKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYKRETRNIGKLFESTLMQKFGPAAVGQHYMAFDTICDATQERQDAMLEMVEDKEIDLMLVVGGWDSSNTHHLAEIAVDRGFTTYWINRAECIKPDGSIEYMDPHTFAVVKKEKFLPAGKIAVGVTSGASTPDAYMEQALENIFLLKGL-GLAAEPAAAA 639
Y+IV NM EA+Y+ NYILNGG+K EF KFK+A+S+GFDPDVDL VG+ANQTTM K ET + K FE T+M+K+GP + HY+AF+TICDATQERQDAM+E++ D+E+D++LVVGG++SSNT HL E+A GFT+YW+N CI PD I Y VK E F+P+ +GVTSGASTPD+ ++ LE IF+++ L G AAEPAA A
Sbjct: 231 YLIVLNMKEAEYVSNYILNGGDKEEFRAKFKNAMSDGFDPDVDLKSVGVANQTTMLKSETEEMAKYFEKTMMKKYGPQNLNDHYVAFNTICDATQERQDAMIELM-DEELDMVLVVGGFNSSNTSHLQELAEHGGFTSYWVNEPTCIGPDNIIRYKTSDGEDHVK-EDFIPSRPFRIGVTSGASTPDSVVQDCLERIFMIRKLRGDAAEPAAVA 442 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1592.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1592.5.1 >prot_P-wetherbeei_contig1592.5.1 ID=prot_P-wetherbeei_contig1592.5.1|Name=mRNA_P-wetherbeei_contig1592.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp MDEAQYICNYILNGGNKVEFLEKFKSAISEGFDPDVDLSKVGLANQTTMYback to top mRNA from alignment at P-wetherbeei_contig1592:5777..6918- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1592.5.1 ID=mRNA_P-wetherbeei_contig1592.5.1|Name=mRNA_P-wetherbeei_contig1592.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1142bp|location=Sequence derived from alignment at P-wetherbeei_contig1592:5777..6918- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1592:5777..6918- >mRNA_P-wetherbeei_contig1592.5.1 ID=mRNA_P-wetherbeei_contig1592.5.1|Name=mRNA_P-wetherbeei_contig1592.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig1592:5777..6918- (Phaeothamnion wetherbeei SAG_119_79)back to top |