mRNA_P-wetherbeei_contig15916.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Match: A0A6H5KL54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL54_9PHAE) HSP 1 Score: 199 bits (505), Expect = 3.830e-58 Identity = 115/259 (44.40%), Postives = 146/259 (56.37%), Query Frame = 1
Query: 1 EAELAPAVEGEYIS--LAFLEKKLPPLDDGAVLSFERQGHCSIRQVFSSDEMELLVPSVKAAXXXXXXXXXXXXXXXXXXXXXXXAARDDPDALRAQLEQLPPEQIPFLQARGCGGDGXXXXXKEAATVFNLFRSGGAHSELVRRLVTSKRLAAVASQLLGCDSRVLVYQDSVFVKRPGDGPTRWHSDLNMAPFDTNDFITIWIPLADVPAPEDGGTGLLFASRSHRDFALNYWQDPHAGEDLSERYREESYGAMALGE 771
+AE AP I L FLE + L+FER GH R VFSS ++ L PS+ A P LRA+L++L PE++PFLQ VFN+FR G E + R+V S RLA +A+QLLGC R+ +YQDS F KRPGDG TRWHSDLNMAP D NDF+T WIPL ++PA +GG+ L+FASRSHRDFALN+W+D EDL+ RYRE+ + +A G+
Sbjct: 78 DAEWAPTAPRADIQKGLTFLEAADFDVPAEDRLAFERNGHAVTRGVFSSKQLNALRPSIVQAFELQEMNALRQKVSVWFGDDDASELETAPQ-LRARLKRLTPEEVPFLQ------------------VFNMFRKDGPFRETIERVVLSPRLAHIAAQLLGCQ-RLRLYQDSTFCKRPGDGQTRWHSDLNMAPLDCNDFVTAWIPLEEIPAKREGGSPLVFASRSHRDFALNHWRDSRLREDLTGRYREKDHAPLAAGD 316
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Match: A0A835YLJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLJ4_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.250e-57 Identity = 120/273 (43.96%), Postives = 145/273 (53.11%), Query Frame = 1
Query: 19 AVEGEYISLAFLEKKLPPLDDGAVLSFERQGHCSIRQVFSSDEMELLVPSVKAAXXXXXXXXXXXXXXXXXXXXXXXAARDDPDALRAQLEQLPPEQIPFLQARGCGGDGXXXXXKEAATVFNLFRSGGAHSELVRRLVTSKRLAAVASQLLGCDSRVLVYQDSVFVKRPGDGPTRWHS----------------------DLNMAPFDTNDFITIWIPLADVPAPEDGGTGLLFASRSHRDFALNYWQDPHAGEDLSERYREESYGAMALGE 771
AV+ ++++A P+ +L FER GH R +FS+ EM LL P + A D L L QLPP++IPFLQ VFN++R+ GAH+ V LV S+RLA A+ LLGC + V VYQDS FVKR GDGPT WHS DLNMAPFDTND +T W+PL + A EDGG+GL+FASRSHRDFALNYWQDPHA EDLSERY E AM G+
Sbjct: 31 AVDMNFLNVA------QPVTCAEMLKFERGGHLLTRGLFSAQEMALLSPHIMAGFRALELSALQQKVTVLLGEGAAPPGASAEDLL-VLLRQLPPDEIPFLQ------------------VFNMWRTPGAHAAAVSALVRSRRLARHAAALLGCQA-VRVYQDSTFVKRSGDGPTNWHSGINAQLWAAAAAPLRRHERNRGDLNMAPFDTNDMVTAWLPLTHIAACEDGGSGLVFASRSHRDFALNYWQDPHAQEDLSERYDETPQLAMEPGD 277
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Match: D7FZY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY1_ECTSI) HSP 1 Score: 170 bits (430), Expect = 3.510e-49 Identity = 81/128 (63.28%), Postives = 97/128 (75.78%), Query Frame = 1
Query: 388 LFRSGGAHSELVRRLVTSKRLAAVASQLLGCDSRVLVYQDSVFVKRPGDGPTRWHSDLNMAPFDTNDFITIWIPLADVPAPEDGGTGLLFASRSHRDFALNYWQDPHAGEDLSERYREESYGAMALGE 771
+FR G E + R+V S RLA VA+QLLGC RV +YQDS F KRPGDGPTRWHSDLNMAP D NDF+T WIPL +VPA +GG+ L+FASRSHRDFALN+W+D EDLS RYRE+ + +A G+
Sbjct: 1 MFRKDGPFRETIERVVLSPRLAHVAAQLLGCQ-RVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLEEVPAKREGGSPLVFASRSHRDFALNHWRDSRLREDLSGRYREKDHAPLAAGD 127
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Match: A0A7S2SR24_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR24_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.620e-45 Identity = 112/258 (43.41%), Postives = 135/258 (52.33%), Query Frame = 1
Query: 7 ELAPAVEGEYISLAFLEKKLPPLDDGAVLSFERQGHCSIRQVFSSDEMELLVPSVKAAXXXXXXXXXXXXXXXXXXXXXXXAARDDPDALRAQLEQLPPEQIPFLQARGCGGDGXXXXXKEAATVFNLFRSGGAHSELVRRLVTSKRLAAVASQLLGCDSRVLVYQDSVFVKRPGDGPTRWHSDLNMAPFDTNDFITIWIPLADVPAPEDGGTGLLFASRSHRDFALNYWQDPH-AGEDLSERYRE--ESYGAMALGE 771
E+ EG L F P D VL+FER+GH + R + S+ EM L V+ A D L + E I L+A GC VFN +R A +E V RLAAVA+QLLG SRV +YQDS+F+KRPGDG TRWHSDL+MAPFDTND +T WIPL VPA EDGGTGL FAS SHRDFAL +W PH G+D S RY + S+GA+ G+
Sbjct: 62 EVVGGEEGRNSGLTFAAAPALPTD--TVLAFEREGHIATRGLLSTQEMASLRGPVEEAFRRREFEAWFHSARVMLGDENLV------DDFGLPLLETTEECIEALEAHGC--------ELPFLQVFNSWREDPAVAEFV----CGPRLAAVAAQLLGV-SRVRLYQDSMFLKRPGDGATRWHSDLHMAPFDTNDLVTCWIPLDPVPAQEDGGTGLTFASGSHRDFALAFWSRPHETGKDFSARYDDCLASHGALDPGD 298
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Match: A0A4D9CRB8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRB8_9STRA) HSP 1 Score: 164 bits (416), Expect = 4.030e-45 Identity = 98/246 (39.84%), Postives = 131/246 (53.25%), Query Frame = 1
Query: 40 SLAFLEKKLPPLDDGAVLSFERQGHCSIRQVFSSDEMELLVPSVKAAXXXXXXXXXXXXXXXXXXXXXXXAARDDPDALRAQLEQLPPEQIPFLQARGCGGDGXXXXXKEAATVFNLFRSGGAHSELVRRLVTSKRLAAVASQLLGCDSRVLVYQDSVFVKRPGDGPTRWHSDLNMAPFDTNDFITIWIPLADVPAPEDGGTGLLFASRSHRDFALNYWQDPHAG--EDLSERYREESYGAMALGE 771
SL LE PP+ +LS+ER+GH R + +S+E++ V+AA + + E + P+ +PFLQ FN G + VRRL +KR A VA++LL RV +YQDS F+KR GDGPT WHSDLNMAPF TN+ +T+W+PL +P E+GGTGLLFAS SHRDFAL++W+D G DL RY +SYG M +G+
Sbjct: 107 SLPSLEAPYPPIPTTQLLSWEREGHTLTRSLCTSEELKDYAKVVRAAFEREKLAAFRQKVRVLLGPEAFQDCQTLEECEEVMEEYVDPDAVPFLQT------------------FN----GWRQFQDVRRLALAKRFARVAAELLNVP-RVRLYQDSTFLKRVGDGPTLWHSDLNMAPFHTNEAVTMWLPLTPIPPEEEGGTGLLFASGSHRDFALSFWEDARGGGRRDLEGRYALDSYGRMEVGD 329
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Match: A0A7S1NK13_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NK13_9EUGL) HSP 1 Score: 150 bits (379), Expect = 2.340e-41 Identity = 73/131 (55.73%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 379 VFNLFRSGGAHSELVRRLVTSKRLAAVASQLLGCDSRVLVYQDSVFVKRPGDGPTRWHSDLNMAPFDTNDFITIWIPLADVPAPEDGGTGLLFASRSHRDFALNYWQDPHAGEDLSERYREESYGAMALGE 771
+FN+++ S RR S+RL ++A+Q+LG + V +YQDSVF KRPGDGPT WHSDLNMAPFDTNDF+T WIPL +P ++GG+ L FASRSHRD AL +W DP DLS+RY E+YG +G+
Sbjct: 17 LFNVWKE----SPEARRFALSRRLGSIAAQVLGVPA-VRLYQDSVFAKRPGDGPTEWHSDLNMAPFDTNDFVTFWIPLQPIPYSDEGGSSLCFASRSHRDVALPFWSDPRTT-DLSDRYEVETYGEFKVGD 141
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Match: I2CS45_NANGC (Phytanoyl-dioxygenase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CS45_NANGC) HSP 1 Score: 144 bits (362), Expect = 3.270e-39 Identity = 78/163 (47.85%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 289 EQLPPEQIPFLQARGCGGDGXXXXXKEAATVFNLFRSGGAHSELVRRLVTSKRLAAVASQLLGCDSRVLVYQDSVFVKRPGDGPTRWHSDLNMAPFDTNDFITIWIPLADVPAPEDGGTGLLFASRSHRDFALNYWQDPHAG--EDLSERYREESYGAMALGE 771
E + P+ +PFLQ FN G + VRRL +KR A VA++LL RV +YQDS F+KR GDGPT WHSDL+MAPF TN+ +T+W+PL +P ++GGTGLLFAS SHRDFAL++W+D G DL RY +SYG M +G+
Sbjct: 3 EYVDPDAVPFLQT------------------FN----GWRQFQDVRRLALAKRFARVAAELLNVP-RVRLYQDSTFLKRVGDGPTLWHSDLSMAPFHTNEAVTMWLPLTPIPPEDEGGTGLLFASGSHRDFALSFWEDAKGGGRRDLEGRYALDSYGRMEVGD 142
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Match: A0A482S616_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S616_9ARCH) HSP 1 Score: 146 bits (369), Expect = 1.940e-38 Identity = 96/238 (40.34%), Postives = 118/238 (49.58%), Query Frame = 1
Query: 61 KLPPLDDGAVLSFERQGHCSIRQVFSSDEME-LLVPSVKAAXXXXXXXXXXXXXXXXXXXXXXXAARDDPDALRAQLEQLPPEQIPFLQARGCGGDGXXXXXKEAATVFNLFRSGGAHSELVRRLVTSKRLAAVASQLLGCDSRVLVYQDSVFVKRPGDGPTRWHSDLNMAPFDTNDFITIWIPLADVPAPEDGGTGLLFASRSHRDFALNYWQDPHAGEDLSERYREESYGAMALGE 771
KL PL D +LSF + GH I +F+ D + L+P V +A D + PFLQ +F L+R E +++ S LA +A QLL + V +YQDS+FVKRPGDG T WHSDLNMAPFDTNDF+T WIPL VPA EDGGTGL FAS SHRDFAL+YW D + E L RY A +G+
Sbjct: 51 KLKPLSDSQLLSFSKDGHLRIDGLFNKDFLSNQLLPQVISALKDRELQALRHQIKIVLGRTDVDKMTMDQCKKVLTSSSVDTNAFPFLQ------------------LFQLWRI----YEAAQKVACSMDLAKIACQLLDVPA-VRLYQDSLFVKRPGDGATCWHSDLNMAPFDTNDFLTCWIPLVSVPAVEDGGTGLSFASASHRDFALSYWYDARSAE-LDGRYALHDSDAFKVGD 264
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Match: A0A1Y1IJL8_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJL8_KLENI) HSP 1 Score: 140 bits (354), Expect = 5.120e-36 Identity = 93/229 (40.61%), Postives = 121/229 (52.84%), Query Frame = 1
Query: 88 VLSFERQGHCSIRQVFSSDEMELLVPSVKAAXXXXXXXXXXXXXXXXXXXXXXXAARDDPDALRAQLEQLPPEQIPFLQARGCGGDGXXXXXKEAATVFNLFRSGGAHSELVRRLVTSKRLAAVASQLLGCDSRVLVYQDSVFVKRPGDGPTRWHSDLNMAPFDTNDFITIWIPLADVPAPEDGGTGLLFASRSHRDFALNYWQDPHAGEDLSER-YREESYGAMALGE 771
+L FER GH +RQ+ + ME + AA + + AL A L + +++ FLQ +FNL R +S VR LVTS RLA VA+ LLG S+V +YQD +F+K+PG G T WHSDLNM P DTN F+T+WIPL A ++ +GLLFAS SHRDF+L YWQD EDL R Y E +GA+ LG+
Sbjct: 82 LLQFERTGHVLVRQLVPEEAMEECAEEIWAAAREQELEAYRHRVAVLCPGVDASSVSNIEQAL-AVLAEHATDELGFLQ------------------MFNLHR----YSRTVRELVTSPRLARVAADLLGA-SKVRLYQDCLFLKQPGFGATNWHSDLNMVPLDTNAFVTLWIPLR---AMDEDDSGLLFASGSHRDFSLAYWQDLEGMEDLERREYLLEDHGALDLGD 283
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Match: R1DNY2_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNY2_EMIHU) HSP 1 Score: 140 bits (352), Expect = 5.600e-36 Identity = 83/172 (48.26%), Postives = 103/172 (59.88%), Query Frame = 1
Query: 265 PDALRAQL-EQLPPEQIPFLQARGCGGDGXXXXXKEAATVFNLFRSGGAHSELVRRLVTSKRLAAVASQLLGCDSRVLVYQDSVFVKRPGDGPTRWHSDLNMAPFDTNDFITIWIPLADVPAPEDGGTGLLFASRSHRDFALNYWQ-DPHAGEDLSER-YREESYGAMALGE 771
P LR L E+LP +PF+Q +FNL+R+ S +V L S LA A+ LLG + RV +YQDS F+KRPGDGPT WHSDL+MAP DTN F+T W+PL DV AP+DGG+ L+FAS SHRD ALN+W DP D S R Y GA+ G+
Sbjct: 64 PHVLRRILREELPEGAVPFMQ------------------LFNLWRT----SPMVHELWRSPALAGTAASLLGVE-RVRLYQDSYFLKRPGDGPTHWHSDLSMAPLDTNSFVTCWLPLHDVAAPDDGGSSLVFASGSHRDVALNFWHGDPRRPVDASTRGYPLRDGGALRAGD 212 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15916.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15916.1.1 >prot_P-wetherbeei_contig15916.1.1 ID=prot_P-wetherbeei_contig15916.1.1|Name=mRNA_P-wetherbeei_contig15916.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp EAELAPAVEGEYISLAFLEKKLPPLDDGAVLSFERQGHCSIRQVFSSDEMback to top mRNA from alignment at P-wetherbeei_contig15916:21..1506- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15916.1.1 ID=mRNA_P-wetherbeei_contig15916.1.1|Name=mRNA_P-wetherbeei_contig15916.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1486bp|location=Sequence derived from alignment at P-wetherbeei_contig15916:21..1506- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15916:21..1506- >mRNA_P-wetherbeei_contig15916.1.1 ID=mRNA_P-wetherbeei_contig15916.1.1|Name=mRNA_P-wetherbeei_contig15916.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig15916:21..1506- (Phaeothamnion wetherbeei SAG_119_79)back to top |