mRNA_P-wetherbeei_contig15914.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Match: A0A7S2UUZ3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUZ3_9STRA) HSP 1 Score: 112 bits (279), Expect = 2.750e-27 Identity = 51/80 (63.75%), Postives = 67/80 (83.75%), Query Frame = 1
Query: 184 VSWKDIKVVQGLIERCLQKYKSQEEIVATLEEQANVDPHFTMSVWAKLEEQNPEFFYAYNVQLQLLDQIMAYNFLVDEQV 423
+SW DIK+VQ LIERCLQ+Y +Q EI+ L+ QANVDP FT VW KLEEQNPEFFY Y+++L+L DQI+A+N+LV++Q+
Sbjct: 18 ISWNDIKMVQALIERCLQQYMTQPEIITALQVQANVDPSFTCLVWQKLEEQNPEFFYTYSIRLRLKDQIVAFNYLVNQQL 97
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Match: D7G7H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7H7_ECTSI) HSP 1 Score: 112 bits (280), Expect = 7.260e-27 Identity = 52/87 (59.77%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 175 DGPVSWKDIKVVQGLIERCLQKYKSQEEIVATLEEQANVDPHFTMSVWAKLEEQNPEFFYAYNVQLQLLDQIMAYNFLVDEQVCFLQ 435
D VSW DIK VQ LIERCLQK+ +Q EI+A L+ +ANVDP FT VW KLE+QNPEFF++Y+ +L++ DQI+A+N+LVD+QV ++
Sbjct: 76 DSNVSWNDIKSVQNLIERCLQKFMTQTEIIAALQVEANVDPSFTCLVWQKLEQQNPEFFFSYHARLKMRDQIVAFNYLVDQQVYLIR 162
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Match: A0A835YZS3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZS3_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.220e-26 Identity = 50/89 (56.18%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 184 VSWKDIKVVQGLIERCLQKYKSQEEIVATLEEQANVDPHFTMSVWAKLEEQNPEFFYAYNVQLQLLDQIMAYNFLVDEQVCFLQHMQAA 450
V W DIK+VQ LIERCL ++ +Q ++VATL +QAN+DP FT VW KLEEQNPEFFY Y V++ + DQI+++N+LV+ Q+ +Q + AA
Sbjct: 30 VKWDDIKMVQTLIERCLNQFMTQSQVVATLVQQANIDPSFTCLVWQKLEEQNPEFFYTYGVRVTMRDQILSFNYLVERQLELMQQLNAA 118
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Match: A0A6H5LJM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJM5_9PHAE) HSP 1 Score: 113 bits (282), Expect = 4.300e-26 Identity = 55/99 (55.56%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 139 AAAARHDDVLHLDGPVSWKDIKVVQGLIERCLQKYKSQEEIVATLEEQANVDPHFTMSVWAKLEEQNPEFFYAYNVQLQLLDQIMAYNFLVDEQVCFLQ 435
A+ R +D D VSW DIK VQ LIERCLQK+ +Q EI+A L+ +ANVDP FT VW KLE+QNPEFF++Y+ +L++ DQI+A+N+LVD+QV ++
Sbjct: 69 ASGGRSED----DSNVSWNDIKSVQNLIERCLQKFMTQTEIIAALQVEANVDPSFTCLVWQKLEQQNPEFFFSYHARLKMRDQIVAFNYLVDQQVYLIR 163
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Match: A0A7S3ZKS9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKS9_9STRA) HSP 1 Score: 104 bits (259), Expect = 5.580e-26 Identity = 48/96 (50.00%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 178 GPVSWKDIKVVQGLIERCLQKYKSQEEIVATLEEQANVDPHFTMSVWAKLEEQNPEFFYAYNVQLQLLDQIMAYNFLVDEQVCFLQHMQAAVAQRA 465
G +W +K VQ LIERCL +Y +Q E++ATL+ QA+VDP T VW+KLEE NP+FF +Y+V+L+L DQ++A+N+LV++Q LQ + A+ Q++
Sbjct: 8 GSYTWTQVKSVQNLIERCLNQYMTQAEVIATLQVQADVDPALTCLVWSKLEEANPDFFLSYDVRLKLKDQVVAFNYLVEQQTRLLQKLTLALPQQS 103
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Match: A0A1W0A900_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A900_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.650e-24 Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 187 SWKDIKVVQGLIERCLQKYKSQEEIVATLEEQANVDPHFTMSVWAKLEEQNPEFFYAYNVQLQLLDQIMAYNFLVDEQ 420
SW +I VQ LIERCLQ+ SQE+I+ L+ QAN+DP+FT +VW KLEEQNP FFYAY L+L DQI+ +N+LV +Q
Sbjct: 18 SWNEILRVQNLIERCLQQCMSQEDIIVALQNQANIDPNFTRTVWQKLEEQNPSFFYAYTTHLKLKDQILMFNYLVSQQ 95
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Match: I0YS27_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YS27_COCSC) HSP 1 Score: 98.6 bits (244), Expect = 3.440e-23 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 184 VSWKDIKVVQGLIERCLQKYKSQEEIVA-TLEEQANVDPHFTMSVWAKLEEQNPEFFYAYNVQLQLLDQIMAYNFLVDEQVCFLQHMQ 444
VS +DI++VQ LIERCLQ Y SQ E+V TL++QA ++P FT VW KLEEQNP+FF AY +L+L DQI+ +N L+++QV Q MQ
Sbjct: 50 VSTQDIQLVQNLIERCLQMYMSQREVVVFTLQQQAQIEPGFTQLVWQKLEEQNPDFFRAYYTRLKLKDQIVLFNHLLEQQVAMFQKMQ 137
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Match: A0A8J9RL91_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RL91_9CHLO) HSP 1 Score: 102 bits (254), Expect = 3.500e-23 Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 184 VSWKDIKVVQGLIERCLQKYKSQEEIVATLEEQANVDPHFTMSVWAKLEEQNPEFFYAYNVQLQLLDQIMAYNFLVDEQVCFLQHMQ 444
VS +DI++VQ LIERCLQ Y SQ E+V TL++QA ++P FT VW KLEEQNP+FF AY +L+L DQI+ +N L+++QV Q MQ
Sbjct: 50 VSTQDIQLVQNLIERCLQMYMSQREVVFTLQQQAQIEPGFTQLVWQKLEEQNPDFFRAYYTRLKLKDQIVLFNHLLEQQVAMFQKMQ 136
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Match: A0A329SSC1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SSC1_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.940e-23 Identity = 56/107 (52.34%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 187 SWKDIKVVQGLIERCLQKYKSQEEIVATLEEQANVDPHFTMSVWAKLEEQNPEFFYAYNVQLQLLDQIMAYNFLVDEQ----------VCFLQHMQAAVAQRAEVSC 477
SW DI VQ LIERCLQ+Y S+ +I+ TL+EQANVDP FT VW KLEEQNP FF AY++QLQL +QI+A+N+LV +Q + +M + A RA C
Sbjct: 237 SWNDILRVQNLIERCLQQYLSKNDILITLKEQANVDPAFTNVVWQKLEEQNPRFFRAYSLQLQLKEQIIAFNYLVGQQKEMAAKGGKRLLHYSNMNRSSANRASAPC 343
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Match: W2ICX8_PHYPR (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2ICX8_PHYPR) HSP 1 Score: 102 bits (255), Expect = 7.890e-23 Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 1
Query: 187 SWKDIKVVQGLIERCLQKYKSQEEIVATLEEQANVDPHFTMSVWAKLEEQNPEFFYAYNVQLQLLDQIMAYNFLVDEQ 420
SW DI VQ LIERCLQ+Y S+ +I+ TL+EQANVDP FT VW KLEEQNP FF AY++QLQL +QI+A+N+LV +Q
Sbjct: 207 SWNDILRVQNLIERCLQQYLSKNDILITLKEQANVDPAFTNVVWQKLEEQNPTFFRAYSLQLQLKEQIIAFNYLVGQQ 284 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15914.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15914.1.1 >prot_P-wetherbeei_contig15914.1.1 ID=prot_P-wetherbeei_contig15914.1.1|Name=mRNA_P-wetherbeei_contig15914.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp ETESNKRDRLEVEMVVAGSMQTARAPRTKKTPGVKPPRKTAASRRKAAAAback to top mRNA from alignment at P-wetherbeei_contig15914:37..1333+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15914.1.1 ID=mRNA_P-wetherbeei_contig15914.1.1|Name=mRNA_P-wetherbeei_contig15914.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1297bp|location=Sequence derived from alignment at P-wetherbeei_contig15914:37..1333+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15914:37..1333+ >mRNA_P-wetherbeei_contig15914.1.1 ID=mRNA_P-wetherbeei_contig15914.1.1|Name=mRNA_P-wetherbeei_contig15914.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig15914:37..1333+ (Phaeothamnion wetherbeei SAG_119_79)back to top |