mRNA_P-wetherbeei_contig15848.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Match: D8LRI8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI8_ECTSI) HSP 1 Score: 162 bits (411), Expect = 3.030e-43 Identity = 81/171 (47.37%), Postives = 113/171 (66.08%), Query Frame = 1
Query: 4 LVRCLHFADDDVTRAAAVASKFCQFRTRYGWPMRIRAPAVATALQSAVHWVLPWRDARGRAVVGFTPASIDPSHGSPEAYQKMLAYVLDEVSREKELSRKGVAIVVDGRNVGMMLLRHFGMEDYRRGLGMLTGAFPLKCKAIIVINPSRSVGVALKVATPLMGAKMRQRLQ 516
L +CL +A+ D+ A V S FC+FR + GW + + AP + T L+S VH + RD GR V+ F+P +D P AY KML YVL EV +++EL KG+ ++VD R VG LLR F + DY+RGL ML GAFP K KAI +++ +R +G+ALK+A PL+ AKMR R++
Sbjct: 612 LHQCLEYANYDMAGAIKVCSTFCKFRLQEGWDLVLSAPELETPLRSRVHTLTTNRDRTGRGVLTFSPGKLDMDKAPPAAYHKMLCYVLQEVIKDEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVIGMALKIAMPLLSAKMRARVE 782
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Match: A0A4D9CRC3_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRC3_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.580e-28 Identity = 66/178 (37.08%), Postives = 103/178 (57.87%), Query Frame = 1
Query: 1 FLVRCLHFADDDVTRAAAVASKFCQFRTRYGWPMRIRAPAVATA-LQSAVHWVLPWRDARGRAVVGFTPASIDPSHGSPEAYQKMLAYVLDEVSREKELSRKGVAIVVDGRNVGMMLLRHF-GMEDYRRGLGMLTGAFPLKCKAIIVINPSRSVGVALKVATPLMGAKMRQRLQVLYH 528
FL++CL A VA F FR GWP+R+ A ++ L+S HW+LP +D GR + F ID GS E YQ+M AY+++ ++RE+E+ R G+ +VV+ +V + L R + D +RG+ M AFP K K I V+ SR + A+++ ++G K+R+R++VL H
Sbjct: 142 FLLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRLTARDISGGPLESGAHWILPGKDKEGRGLFVFNVGRIDTRLGSLERYQQMGAYLVERLTREEEVQRTGLVMVVNMAHVPLGLYRSLISLTDAKRGVRMWQDAFPCKLKRIYVVGGSRWLLQAVRLVVAMLGKKLRKRVRVLSH 319
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Match: W7T9X6_9STRA (Retinaldehyde binding protein 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9X6_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.540e-28 Identity = 67/178 (37.64%), Postives = 103/178 (57.87%), Query Frame = 1
Query: 1 FLVRCLHFADDDVTRAAAVASKFCQFRTRYGWPMRIRAPAVATA-LQSAVHWVLPWRDARGRAVVGFTPASIDPSHGSPEAYQKMLAYVLDEVSREKELSRKGVAIVVDGRNVGMMLLRHF-GMEDYRRGLGMLTGAFPLKCKAIIVINPSRSVGVALKVATPLMGAKMRQRLQVLYH 528
FL++CL A VA F FR GWP+R+ A V+ L+S HW+LP +D GR + F ID GS E YQ+M AY+++ ++RE+E+ R G+ +VV+ +V + L R + D +RG+ M AFP K K I V+ SR + A+++ ++G K+R+R++VL H
Sbjct: 141 FLLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRLTARDVSGGPLESGAHWILPGKDKEGRGLFVFNVGRIDTRLGSLERYQQMGAYLVERLTREEEVQRTGLVMVVNMAHVPLGLYRSLISLTDAKRGVRMWQDAFPSKLKRIYVVGGSRWLLQAVRLVVAMLGKKLRKRVRVLPH 318
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Match: A0A8J6ET37_ELECQ (CRAL-TRIO domain-containing protein (Fragment) n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6ET37_ELECQ) HSP 1 Score: 67.0 bits (162), Expect = 3.600e-10 Identity = 47/173 (27.17%), Postives = 75/173 (43.35%), Query Frame = 1
Query: 1 FLVRCLHFADDDVTRAAAVASKFCQFRTRYGWP---MRIRAPAVATALQSAVHWVLPWRDARGRAVVGFTPASIDPSHGSPEAYQKMLAYVLDEVSREKELSRKGVAIVVDGRNVGMMLLRHFGMEDYRRGLGMLTGAFPLKCKAIIVINPSRSVGVALKVATPLMGAKMRQR 510
FL+R L D RA + + + R GWP +R AV L S VLP D GR +V P +P + + L+++ +E G+ I+ D VG+ HFG ++ +G+L FP++ KA+ +IN R + P + K+ +R
Sbjct: 88 FLLRFLRARKFDYDRALQLLVNY--YTCRKGWPEVFSNLRPSAVKPVLDSGFLTVLPLADTEGRRIVCMRPGQWNPQSFPITENLRAIYLSLEKLIEAEETQVNGIVILADYEGVGLSQASHFGPFIAKKIIGILQDGFPIRIKAVNIINEPRIFKGIYAILRPFLKEKIVKR 258
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Match: UPI001961EFDC (alpha-tocopherol transfer protein-like isoform X1 n=1 Tax=Passer montanus TaxID=9160 RepID=UPI001961EFDC) HSP 1 Score: 67.0 bits (162), Expect = 4.010e-10 Identity = 46/176 (26.14%), Postives = 80/176 (45.45%), Query Frame = 1
Query: 1 FLVRCLHFADDDVTRAAAVASKFCQFRTRYGWP---MRIRAPAVATALQSAVHWVLPWRDARGRAVVGFTPASIDPSHGSPEAYQKMLAYVLDEVSREKELSRKGVAIVVDGRNVGMMLLRHFGMEDYRRGLGMLTGAFPLKCKAIIVINPSRSVGVALKVATPLMGAKMRQRLQV 519
FL+R L D RA + + R WP ++ A+ L+S VLP RD +GR VV P PS+ + + L+++ + +E G+ I+ D + V + HFG ++ +G+L FP++ KA+ +IN R + P + K+ R+++
Sbjct: 78 FLLRFLRARKFDYDRALQLLVNY--HTCRRTWPEVFSNLKPSAIKPVLESGFVTVLPHRDPQGRHVVCIRPDRWTPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFVAKKVIGILQDGFPIRIKAVNIINEPRIFKGIFAIIKPFLKEKIANRVRI 251
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Match: UPI001CF457B4 (alpha-tocopherol transfer protein-like isoform X1 n=4 Tax=Bufo TaxID=8383 RepID=UPI001CF457B4) HSP 1 Score: 67.0 bits (162), Expect = 6.880e-10 Identity = 46/174 (26.44%), Postives = 77/174 (44.25%), Query Frame = 1
Query: 1 FLVRCLHFADDDVTRAAAVASKFCQFRTRYGWP---MRIRAPAVATALQSAVHWVLPWRDARGRAVVGFTPASIDPSHGSPEAYQKMLAYVLDEVSREKELSRKGVAIVVDGRNVGMMLLRHFGMEDYRRGLGMLTGAFPLKCKAIIVINPSRSVGVALKVATPLMGAKMRQRL 513
FL+R L D RA + + + R GWP +R A+ L S VLP D GR +V P +P + + + L+++ +E G+ I+ D VG+ HFG ++ +G+L FP++ KA+ +IN R + P + K+ +R+
Sbjct: 99 FLLRFLRARKFDYDRALQLLVNY--YSCRKGWPEVFTNLRPSAIKPVLDSGFLTVLPHADTDGRRIVCIRPGQWNPRNFPITENLRAMYLSLEKLIEAEETQVNGIVILADYEGVGLSQASHFGPFIAKKIIGILQDGFPIRIKAVNIINEPRIFKGIYAILRPFLKEKIVKRI 270
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Match: A0A852CSA0_9PICI (TTPAL protein (Fragment) n=7 Tax=Neognathae TaxID=8825 RepID=A0A852CSA0_9PICI) HSP 1 Score: 65.9 bits (159), Expect = 1.630e-9 Identity = 46/173 (26.59%), Postives = 75/173 (43.35%), Query Frame = 1
Query: 1 FLVRCLHFADDDVTRAAAVASKFCQFRTRYGWP---MRIRAPAVATALQSAVHWVLPWRDARGRAVVGFTPASIDPSHGSPEAYQKMLAYVLDEVSREKELSRKGVAIVVDGRNVGMMLLRHFGMEDYRRGLGMLTGAFPLKCKAIIVINPSRSVGVALKVATPLMGAKMRQR 510
FL+R L D RA + + R WP +R A+ L+S VLP RD GR +V P PS + + L+++ + +E G+ I+ D + V + HFG ++ +G+L FP++ KA+ +IN R + P + K+ R
Sbjct: 78 FLLRFLRARKFDYDRALQLLVNY--HSCRRSWPEVFSNLRPSAIKPVLESGFVTVLPHRDPEGRHIVCIRPDRWSPSQYPITENIRAIYLTLEKLIQAEETQVNGIVILADYKGVSLSKASHFGPFVAKKVIGILQDGFPIRIKAVNIINEPRIFKGIFAIIKPFLKEKIANR 248
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Match: A0A1L8EL65_XENLA (alpha-tocopherol transfer protein-like n=2 Tax=Xenopus TaxID=8353 RepID=A0A1L8EL65_XENLA) HSP 1 Score: 65.5 bits (158), Expect = 2.220e-9 Identity = 48/173 (27.75%), Postives = 74/173 (42.77%), Query Frame = 1
Query: 1 FLVRCLHFADDDVTRAAAVASKFCQFRTRYGWP---MRIRAPAVATALQSAVHWVLPWRDARGRAVVGFTPASIDPSHGSPEAYQKMLAYVLDEVSREKELSRKGVAIVVDGRNVGMMLLRHFGMEDYRRGLGMLTGAFPLKCKAIIVINPSRSVGVALKVATPLMGAKMRQR 510
FL+R L D RA + + + R GWP +R AV L S VLP D GR +V P P + + L+++ +E G+ I+ D VG+ HFG ++ +G+L FP++ KA+ VIN R + P + K+ +R
Sbjct: 77 FLLRFLRARKFDYDRALQLLVNY--YSCRKGWPEVFTDLRPSAVKPVLDSGFLTVLPHTDTEGRRIVCIRPGCWIPRDYPITENIRAIYLTLEKLVESEETQVNGIVILADYNGVGLTHASHFGPFIAKKVIGILQDGFPIRIKAVNVINEPRIFKGIFAILKPFLKEKIVKR 247
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Match: A0A674GVN4_TAEGU (CRAL-TRIO domain-containing protein n=38 Tax=Archosauria TaxID=8492 RepID=A0A674GVN4_TAEGU) HSP 1 Score: 65.1 bits (157), Expect = 2.760e-9 Identity = 46/173 (26.59%), Postives = 77/173 (44.51%), Query Frame = 1
Query: 1 FLVRCLHFADDDVTRAAAVASKFCQFRTRYGWP---MRIRAPAVATALQSAVHWVLPWRDARGRAVVGFTPASIDPSHGSPEAYQKMLAYVLDEVSREKELSRKGVAIVVDGRNVGMMLLRHFGMEDYRRGLGMLTGAFPLKCKAIIVINPSRSVGVALKVATPLMGAKMRQR 510
FL+R L D RA + + R WP ++ A+ L+S VLP RD +GR VV P PS+ + + L+++ + +E G+ I+ D + V + HFG ++ +G+L FP++ KA+ +IN R + P + K+ R
Sbjct: 78 FLLRFLRARKFDYDRALQLLVNY--HTCRRTWPEVFSNLKPSAIKPVLESGFVTVLPHRDPQGRHVVCIRPDRWTPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFVAKKVIGILQDGFPIRIKAVNIINEPRIFKGIFAIIKPFLKEKIANR 248
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Match: A0A674GM35_TAEGU (CRAL-TRIO domain-containing protein n=185 Tax=Archosauria TaxID=8492 RepID=A0A674GM35_TAEGU) HSP 1 Score: 65.1 bits (157), Expect = 3.040e-9 Identity = 46/173 (26.59%), Postives = 77/173 (44.51%), Query Frame = 1
Query: 1 FLVRCLHFADDDVTRAAAVASKFCQFRTRYGWP---MRIRAPAVATALQSAVHWVLPWRDARGRAVVGFTPASIDPSHGSPEAYQKMLAYVLDEVSREKELSRKGVAIVVDGRNVGMMLLRHFGMEDYRRGLGMLTGAFPLKCKAIIVINPSRSVGVALKVATPLMGAKMRQR 510
FL+R L D RA + + R WP ++ A+ L+S VLP RD +GR VV P PS+ + + L+++ + +E G+ I+ D + V + HFG ++ +G+L FP++ KA+ +IN R + P + K+ R
Sbjct: 78 FLLRFLRARKFDYDRALQLLVNY--HTCRRTWPEVFSNLKPSAIKPVLESGFVTVLPHRDPQGRHVVCIRPDRWTPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFVAKKVIGILQDGFPIRIKAVNIINEPRIFKGIFAIIKPFLKEKIANR 248 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15848.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15848.1.1 >prot_P-wetherbeei_contig15848.1.1 ID=prot_P-wetherbeei_contig15848.1.1|Name=mRNA_P-wetherbeei_contig15848.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp FLVRCLHFADDDVTRAAAVASKFCQFRTRYGWPMRIRAPAVATALQSAVHback to top mRNA from alignment at P-wetherbeei_contig15848:179..1555+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15848.1.1 ID=mRNA_P-wetherbeei_contig15848.1.1|Name=mRNA_P-wetherbeei_contig15848.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1377bp|location=Sequence derived from alignment at P-wetherbeei_contig15848:179..1555+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15848:179..1555+ >mRNA_P-wetherbeei_contig15848.1.1 ID=mRNA_P-wetherbeei_contig15848.1.1|Name=mRNA_P-wetherbeei_contig15848.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig15848:179..1555+ (Phaeothamnion wetherbeei SAG_119_79)back to top |