mRNA_P-wetherbeei_contig15841.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15841.1.1
Unique NamemRNA_P-wetherbeei_contig15841.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Match: A0A7S2XXP3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXP3_9STRA)

HSP 1 Score: 252 bits (643), Expect = 3.760e-80
Identity = 165/267 (61.80%), Postives = 199/267 (74.53%), Query Frame = 1
Query:    1 KKRHIAVFQEEERLKEEALAKQGRIRKKGERKVRPPELPPPPDTDAEPLTSSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRAVQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEALLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEEYVARAEKEKXXXXXXXXXXXXXXXXELAQEERNRKAIQRSLQAPRRRTGRPVMFRSRLVRQEKREDK 801
            K R +    E+E  + EAL KQG+++KK E+K R  ELPPPP+ D E LTSS ED PMYF  P QLLDIF ALEEQNLFLIQNSQETEHALEEL+  +R  ++ MD KTAAL+ N+D L   I +E+A+ +QL RR+  + G+   RQE LL +LN KVKEVY++C F+AGS P TLFMLS+LE+RLEDLL AI  M   +V RAEKEK XXXXXXXXXXX    E  QEERNRK+I+RSLQAP++RTGR VMFRS+  R+  REDK
Sbjct:    4 KMRLLREAAEQEAAEAEALLKQGKVKKKSEKKHRTIELPPPPNPDHEDLTSSGEDCPMYFKNPQQLLDIFTALEEQNLFLIQNSQETEHALEELKQNFRDTKQKMDEKTAALKHNIDELQTQIESEEAKVNQLERRIRTSAGNTQGRQEELLHQLNEKVKEVYQRCGFEAGSNPQTLFMLSELESRLEDLLCAIDNMDVNHVKRAEKEKEXXXXXXXXXXXQALAEKLQEERNRKSIERSLQAPKKRTGRQVMFRSQPQRRTIREDK 270          
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Match: D7G879_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G879_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 4.020e-71
Identity = 150/214 (70.09%), Postives = 176/214 (82.24%), Query Frame = 1
Query:  133 DAEPLTSSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRAVQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEALLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEEYVARAEKEKXXXXXXXXXXXXXXXXELAQEERNRKAIQRSLQAPRRRTGRPVMFRSRL 774
            D EPLTSS+ED PM+F++  QLLDIFQALEEQNLF IQNSQETEHAL+EL+  +  VQ+ MD KT ALR N+  L  +I  E+A+A+QLR+R+A +TGD L RQE LL++LN +VK VYE+C FDA S PTTL+MLSDLEARLEDLL+ I QMPEEYVA+AEKEK XXXXXXXXXXXXXXX      RNRKAI+RSLQAPR++ GRPVMFRSRL
Sbjct:  313 DQEPLTSSEEDIPMFFTKQEQLLDIFQALEEQNLFFIQNSQETEHALDELKQNFGKVQKTMDTKTQALRSNIRELVDSIDVEEAKAEQLRKRIAASTGDTLDRQEELLKQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSDIGQMPEEYVAKAEKEKEXXXXXXXXXXXXXXXXXXXXXRNRKAIERSLQAPRKKVGRPVMFRSRL 526          
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Match: F0Y2D2_AURAN (DUF4200 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2D2_AURAN)

HSP 1 Score: 214 bits (544), Expect = 2.630e-62
Identity = 141/235 (60.00%), Postives = 174/235 (74.04%), Query Frame = 1
Query:  106 PELPPP---PDTDAEPLTSSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRAVQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEALLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEEYVARAEKEKXXXXXXXXXXXXXXXXELAQEERNRKAIQRSLQAPRRRTGRPVMFRSRLVRQEKREDK 801
            P++PPP   P+ + EPLTSSDE+ PMYF  P QLLDIF  LEEQNLFLIQNSQETE ALEEL+  + A +  MD KTA L++N+D L   I AE+ +A QLR R+    G+   RQE LL +L+ KV++VY++C FD GSKP+TLFMLS+LEARLE LL  I  M EEY+ + EK+ XXXXXXXXXXXX    +  QEERNRK+I RS+QAP++RTGR VMFRS  +RQ  RE+K
Sbjct:  296 PKMPPPVATPELEDEPLTSSDEELPMYFKHPQQLLDIFSQLEEQNLFLIQNSQETEKALEELKQNFEATKEQMDGKTALLKQNIDELELQIGAEENKAAQLRGRLQARAGETQGRQEKLLAQLHEKVRDVYQKCGFDVGSKPSTLFMLSELEARLEQLLDHIETMSEEYIMKEEKDXXXXXXXXXXXXXQALQDAQQEERNRKSIARSMQAPKKRTGRQVMFRSAPMRQAVREEK 530          
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Match: A0A080ZXZ2_PHYPR (DUF4200 domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A080ZXZ2_PHYPR)

HSP 1 Score: 204 bits (518), Expect = 1.680e-59
Identity = 137/257 (53.31%), Postives = 177/257 (68.87%), Query Frame = 1
Query:   13 IAVFQEEERL-KEEALAKQGRIRKKGERKVRPPELPPPPDTDAEPLTSSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRAVQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEALLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEEYVARAEKEKXXXXXXXXXXXXXXXXELAQEERNRKAIQRSLQAPRRRTGRPVMFRSRLVR 780
            +A  +E ER  KE   +K G+ +     KV+   +PP P+ D  PLTSS E+ PMYF  P QLLDIF ALEE NLFLIQNSQETE  LEEL+  YR   + MD KT AL+ NVDGL   I+ E+++A QLR R  G TG+  Q  E +L+EL  +V EVY++C F+A +  +TL+ML+DLEARLEDLL+AI QMPE+YVA+AEKEK  X XXXXX       +   EER +K+++RS+QAP++R GR VM+RS+  R
Sbjct:  159 LAEIEERERAEKERPDSKNGKKKVDKAVKVKELTIPPMPNLDNMPLTSSGEEIPMYFQNPQQLLDIFTALEESNLFLIQNSQETEQTLEELKQNYRXXXKTMDRKTQALKSNVDGLQQQISIEESKASQLRLRSQGGTGENAQ--ERMLKELQDRVLEVYKRCGFEAETNSSTLYMLTDLEARLEDLLSAIEQMPEDYVAKAEKEKEKXRXXXXXQERIAQQQKMYEERMKKSMERSMQAPKKRKGRQVMWRSQPAR 413          
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Match: H3GEG8_PHYRM (DUF4200 domain-containing protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3GEG8_PHYRM)

HSP 1 Score: 206 bits (523), Expect = 3.170e-59
Identity = 138/261 (52.87%), Postives = 180/261 (68.97%), Query Frame = 1
Query:    1 KKRHIAVFQEEERL-KEEALAKQGRIRKKGERKVRPPELPPPPDTDAEPLTSSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRAVQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEALLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEEYVARAEKEKXXXXXXXXXXXXXXXXELAQEERNRKAIQRSLQAPRRRTGRPVMFRSRLVR 780
            K + +A  +E ER  KE   +K G+ +     KV+   +PP P+ D+ PLTSS E+ PMYF  P QLLDIF ALEE NLFLIQNSQETE  LEEL+  YR  ++ MD KT AL+ NVDGL   I+ E+ +A QLR R  G TG+  Q  E +L+EL  +V EVY++C F+A +  +TL+ML+DLEARLEDLL+AI QMPE+YVA+AEKEK  X XXXXX       +   EER +K+++RS+QAP++R GR VM+RS+  R
Sbjct:  261 KAKALAEIEERERAEKERPDSKNGKKKTDKAVKVKEIIVPPMPNLDSMPLTSSGEEIPMYFQNPQQLLDIFTALEESNLFLIQNSQETEQTLEELKQNYRETKKTMDRKTQALKTNVDGLQQQISTEEGKASQLRLRSQGGTGENAQ--ERMLKELQDRVLEVYKRCGFEAETNSSTLYMLTDLEARLEDLLSAIEQMPEDYVAKAEKEKEKXRXXXXXQERIAQQQKMYEERMKKSMERSMQAPKKRKGRQVMWRSQPAR 519          
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Match: A0A397CY82_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CY82_9STRA)

HSP 1 Score: 196 bits (497), Expect = 8.240e-58
Identity = 125/229 (54.59%), Postives = 160/229 (69.87%), Query Frame = 1
Query:  103 PPELPPPPDTDAEPLTSSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRAVQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEALLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEEYVARAEKEKXXXXXXXXXXXXXXXXELAQEERNRKAIQRSLQAPRRRTGRPVMFRSRLVRQEK 789
            P  LPP P+ D   +TSS E+ PMYF  P QLLDIF ALEE NLFLIQNSQETE +LEEL+  YR  ++ M+ KT  L++N+D L   I  EDA+A+ LR+R    TG+ +Q  E +L+EL+ KV  VY++C F+A S P TLFML+DLEARLEDLL+AI  MPE+YV +AEKEK   XXXX X           EER +K+++RS+QAP++R GR VM+RS+  RQ K
Sbjct:   63 PSVLPPMPNLDEVAVTSSGEELPMYFQNPQQLLDIFTALEESNLFLIQNSQETEQSLEELKQNYRETKKKMNKKTQLLKQNIDDLKDQIGVEDAKANHLRQRAQAGTGENVQ--EKMLKELHDKVLVVYQRCGFEADSNPNTLFMLTDLEARLEDLLSAIEHMPEDYVVKAEKEKEKEXXXXVXQERISQQTKMYEERMKKSMERSMQAPKKRKGRQVMWRSQPQRQTK 289          
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Match: A0A067CFV5_SAPPC (DUF4200 domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFV5_SAPPC)

HSP 1 Score: 201 bits (512), Expect = 1.230e-57
Identity = 137/268 (51.12%), Postives = 180/268 (67.16%), Query Frame = 1
Query:    7 RHIAVFQEEERLKEEALAKQGRIRKKGERKVRPP----ELPPPPDTDAEPLTSSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRAVQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEALLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEEYVARAEKEKXXXXXXXXXXXXXXXXELAQEERNRKAIQRSLQAPRRRTGRPVMFRSRLVRQEKRED 798
            R +A  +E +R  E    K G+ +KK E K++P      +PP P  D    TSS E+ PMYF  P QLLDIF ALEE NLFLIQNSQETE +LEEL+  YR  ++ M+ KT  L++N+D L   I AED +A+ LR+R    TG+ +Q  E +L+EL+ KV EVY++C F+A S P TLFML+DLEARLEDLL+AI  MPE+YV +AEKEK   XXXX X           EER +K+++RS+QAP++R GR VM+RS+  RQ K++D
Sbjct:  258 RALAEQEERDRAAERVAEKDGKTKKKAE-KLKPAVASSTVPPMPAVDDMVATSSGEELPMYFQNPQQLLDIFTALEESNLFLIQNSQETEQSLEELKQNYRETKKKMNKKTQVLKQNIDELRDQINAEDEKANHLRQRAMAGTGENVQ--ERMLQELHDKVLEVYQRCGFEADSNPNTLFMLTDLEARLEDLLSAIEHMPEDYVVKAEKEKEKEXXXXVXQERIAQQTKMYEERMKKSMERSMQAPKKRKGRQVMWRSQPQRQIKQQD 522          
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Match: A0A2D4C7Z8_PYTIN (DUF4200 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7Z8_PYTIN)

HSP 1 Score: 201 bits (511), Expect = 1.510e-57
Identity = 138/265 (52.08%), Postives = 181/265 (68.30%), Query Frame = 1
Query:    1 KKRHIAVFQEEERLKEEALAKQGRIRKKGERKVRPPEL--PPPPDTDAEPLTSSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRAVQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEALLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEEYVARAEKEKXXXXXXXXXXXXXXXXELAQEERNRKAIQRSLQAPRRRTGRPVMFRSRLVRQEK 789
            K + +A  +E E+ +        + +KK E+  R  E+  PP P+ D+  +TSS E+ PMYF  P QLLDIF ALEE NLFLIQNSQETE  LEEL+  YR  ++ MD KT  L+ N+D L   IA E+A+A QLR R  G T +  Q  E +L+EL+ +V EVY++C F+A S  +TL+ML+DLEARLEDLL+AI QMPEEYVA+AEKEK XXXXXXXX       +   EER +K+++RS+QAP++R GR VM+RS+  RQ K
Sbjct:  250 KAKALAEIEEREKAERXXXXXXXKSKKKPEKTTRVKEITVPPMPNLDSMAVTSSGEEIPMYFQHPQQLLDIFTALEESNLFLIQNSQETEQTLEELKQSYRETKKTMDRKTQNLKNNIDELQQQIAIEEAKASQLRHRSHGGTSENAQ--ERMLKELHDRVLEVYKRCGFEAESNSSTLYMLTDLEARLEDLLSAIEQMPEEYVAKAEKEKEXXXXXXXXQERISQQQKMYEERMKKSMERSMQAPKKRKGRQVMWRSQPARQVK 512          
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Match: A0A1V9ZIQ2_9STRA (DUF4200 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIQ2_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.460e-57
Identity = 132/258 (51.16%), Postives = 175/258 (67.83%), Query Frame = 1
Query:   25 QEEERLKEEALAKQGRIRKKGERKVRPPELPPPPDTDAEPLTSSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRAVQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEALLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEEYVARAEKEKXXXXXXXXXXXXXXXXELAQEERNRKAIQRSLQAPRRRTGRPVMFRSRLVRQEKRED 798
            +E +R  E AL K G+++KK E+   P  +PP P  D    TSS E+ PMYF  P QLLDIF ALEE NLFLIQNSQETE +LEEL+  YR  ++ M+ KT  L++N+D L   I  ED +A+ LR+R    TG+ +Q  E +L+EL+ KV EVY++C F+A S P TLFML+DLEARLEDLL+AI  MPE+YV +AEKEK    XXX             EER +K+++RS+QAP++R GR VM+RS+  RQ K+++
Sbjct:  265 EERDRAAERALEKDGKVKKKAEKPKAPLAVPPMPALDDLVATSSGEELPMYFQHPQQLLDIFTALEESNLFLIQNSQETEQSLEELKQNYRETKKKMNKKTQLLKQNIDELKEQIHGEDEKANHLRQRAQAGTGENVQ--ERMLQELHDKVLEVYQRCGFEADSNPNTLFMLTDLEARLEDLLSAIEHMPEDYVIKAEKEKEKERXXXVRQERIAQQTKMYEERMKKSMERSMQAPKKRKGRQVMWRSQPQRQIKQQE 520          
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Match: A0A024UA34_9STRA (DUF4200 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA34_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.470e-56
Identity = 127/229 (55.46%), Postives = 164/229 (71.62%), Query Frame = 1
Query:  112 LPPPPDTDAEPLTSSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRAVQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEALLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEEYVARAEKEKXXXXXXXXXXXXXXXXELAQEERNRKAIQRSLQAPRRRTGRPVMFRSRLVRQEKRED 798
            LPP P+ D   +TSS E+ PMYF  P QLLDIF ALEE NLFLIQNSQETE +LEEL+  YR  ++ M+ KT  L++N+D L   IA EDA+A+ LR+R    TG+ +Q  E LL+EL+ KV  VY++C F+A S P TLFML+DLEARLEDLL+AI  MPE+YV +AEKEK   XXXXXX           EER +K+++RS+QAP++R GR VM+RS+  RQ K+++
Sbjct:  302 LPPMPNLDELAVTSSGEELPMYFQNPQQLLDIFTALEESNLFLIQNSQETEQSLEELKQNYRETKKKMNKKTQVLKQNIDDLKDQIAVEDAKANHLRQRAQAGTGENVQ--EKLLKELHEKVLVVYQRCGFEADSNPNTLFMLTDLEARLEDLLSAIEHMPEDYVVKAEKEKEKEXXXXXXQERISQQTKMYEERMKKSMERSMQAPKKRKGRQVMWRSQPQRQTKQQE 528          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15841.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XXP3_9STRA3.760e-8061.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7G879_ECTSI4.020e-7170.09Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
F0Y2D2_AURAN2.630e-6260.00DUF4200 domain-containing protein n=1 Tax=Aureococ... [more]
A0A080ZXZ2_PHYPR1.680e-5953.31DUF4200 domain-containing protein n=3 Tax=Peronosp... [more]
H3GEG8_PHYRM3.170e-5952.87DUF4200 domain-containing protein n=18 Tax=Phytoph... [more]
A0A397CY82_9STRA8.240e-5854.59Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A067CFV5_SAPPC1.230e-5751.12DUF4200 domain-containing protein n=3 Tax=Saproleg... [more]
A0A2D4C7Z8_PYTIN1.510e-5752.08DUF4200 domain-containing protein n=1 Tax=Pythium ... [more]
A0A1V9ZIQ2_9STRA2.460e-5751.16DUF4200 domain-containing protein n=1 Tax=Achlya h... [more]
A0A024UA34_9STRA1.470e-5655.46DUF4200 domain-containing protein n=2 Tax=Aphanomy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15841contigP-wetherbeei_contig15841:270..1552 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G879
Preferred nameCCDC37
PFAMsDUF4200
Model size801
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001578,GO:0003341,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0032838,GO:0034622,GO:0035082,GO:0036159,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0044877,GO:0048870,GO:0050790,GO:0051179,GO:0051336,GO:0051674,GO:0060271,GO:0065003,GO:0065007,GO:0065009,GO:0070286,GO:0070840,GO:0070925,GO:0071840,GO:0097014,GO:0097545,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:2000574
Exons3
Evalue6.6e-72
EggNOG OGs28JZ3@1|root,2QSDI@2759|Eukaryota
Ec32 ortholog descriptionflagellar associated protein
Ec32 orthologEc-12_001140.1
Descriptioninner dynein arm assembly
Cds size801
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186069.1889498-CDS-P-wetherbeei_contig15841:269..4821683186069.1889498-CDS-P-wetherbeei_contig15841:269..482Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15841 270..482 +
1683186069.2013757-CDS-P-wetherbeei_contig15841:676..11291683186069.2013757-CDS-P-wetherbeei_contig15841:676..1129Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15841 677..1129 +
1683186069.2109601-CDS-P-wetherbeei_contig15841:1417..15521683186069.2109601-CDS-P-wetherbeei_contig15841:1417..1552Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15841 1418..1552 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15841.1.1prot_P-wetherbeei_contig15841.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15841 270..1552 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15841.1.1

>prot_P-wetherbeei_contig15841.1.1 ID=prot_P-wetherbeei_contig15841.1.1|Name=mRNA_P-wetherbeei_contig15841.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp
KKRHIAVFQEEERLKEEALAKQGRIRKKGERKVRPPELPPPPDTDAEPLT
SSDEDTPMYFSRPGQLLDIFQALEEQNLFLIQNSQETEHALEELQGGYRA
VQRAMDAKTAALRRNVDGLSAAIAAEDARADQLRRRVAGATGDALQRQEA
LLRELNLKVKEVYEQCEFDAGSKPTTLFMLSDLEARLEDLLAAIAQMPEE
YVARAEKEKEKRRRSKKRAEQQAEMELAQEERNRKAIQRSLQAPRRRTGR
PVMFRSRLVRQEKREDK
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mRNA from alignment at P-wetherbeei_contig15841:270..1552+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15841.1.1 ID=mRNA_P-wetherbeei_contig15841.1.1|Name=mRNA_P-wetherbeei_contig15841.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1283bp|location=Sequence derived from alignment at P-wetherbeei_contig15841:270..1552+ (Phaeothamnion wetherbeei SAG_119_79)
AAGAAGCGCCACATCGCGGTGTTCCAGGAGGAAGAGCGGCTCAAAGAGGA GGCACTGGCGAAGCAGGGCCGCATCCGCAAGAAGGGCGAGCGCAAGGTGC GGCCGCCGGAGCTTCCGCCGCCGCCCGACACTGACGCAGAGCCGCTCACG TCTAGTGACGAGGACACGCCCATGTACTTCTCGCGGCCGGGCCAGCTGCT CGACATCTTTCAGGTTAATTGACTAATGCGCCGGATTGTCGGCGGGTCAT GCTACGTGGGTGTGTCAGCTGACTATCTGCTGGCGGCAGGCTGGCTTGCC GTTTCAGTGGGTAGTTCCTTCATAATGTCTAACGACCAATCACTACTCTC TATCTTATCTTCCCATCGATCGATCCGGTGCTTTCACCTGAACGATGTAC CTTCCAGGCGCTGGAGGAGCAAAACCTCTTTTTGATCCAGAACAGCCAGG AGACGGAGCACGCCCTGGAGGAGCTACAGGGCGGCTACCGCGCCGTGCAG CGCGCCATGGACGCCAAGACGGCGGCGCTGCGGCGGAATGTCGACGGCCT CAGCGCCGCCATCGCTGCCGAAGACGCGCGCGCCGACCAGCTGCGGCGGC GCGTCGCCGGCGCCACGGGCGACGCGCTGCAGCGACAGGAAGCGCTGCTC CGCGAGCTGAACCTGAAGGTGAAGGAAGTCTACGAGCAGTGCGAGTTCGA CGCCGGCTCCAAGCCGACGACACTGTTCATGCTGAGCGATTTGGAGGCGC GGCTCGAGGACCTGCTAGCGGCCATCGCACAGATGCCCGAGGAGTACGTG GCGCGCGCCGAGAAGGAGAAGGAGAAGCGCCGCCGCAGCAAAAAGCGCGC TGAGCAGCAGGTGCGAGGCGACCGGCGGCAGACGGCTGCTGTTTTAGTCA AATTTCCCGTTCGATTGCTTGTAGCCGTAAGTCTCTGCAGAAATTCAGGG CGCGCTTTGATCCGCCCACCGGCGCATGCCTTTTGATCGAGAAATGAAGC AGGCGGGAGGCCACCGCTAGACGTGTATATCCACGGTGGCTGTTGGGACA CACTACCGCTGCGGGCAGGAGATCTGGCCTCGCCGTTGCTTACCCGTGCT TTTTGTCTTGACTCTTTGCGCTTCGCGTCCCGTCCGTCCGCCGCGCAGGC GGAGATGGAGCTGGCGCAGGAGGAGCGGAACCGCAAGGCCATTCAGCGGT CGCTGCAGGCGCCCAGGCGACGCACCGGGCGGCCCGTCATGTTCCGTTCG CGCCTCGTGCGGCAGGAGAAGCGCGAGGACAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15841:270..1552+

>mRNA_P-wetherbeei_contig15841.1.1 ID=mRNA_P-wetherbeei_contig15841.1.1|Name=mRNA_P-wetherbeei_contig15841.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig15841:270..1552+ (Phaeothamnion wetherbeei SAG_119_79)
AAGAAGCGCCACATCGCGGTGTTCCAGGAGGAAGAGCGGCTCAAAGAGGA
GGCACTGGCGAAGCAGGGCCGCATCCGCAAGAAGGGCGAGCGCAAGGTGC
GGCCGCCGGAGCTTCCGCCGCCGCCCGACACTGACGCAGAGCCGCTCACG
TCTAGTGACGAGGACACGCCCATGTACTTCTCGCGGCCGGGCCAGCTGCT
CGACATCTTTCAGGCGCTGGAGGAGCAAAACCTCTTTTTGATCCAGAACA
GCCAGGAGACGGAGCACGCCCTGGAGGAGCTACAGGGCGGCTACCGCGCC
GTGCAGCGCGCCATGGACGCCAAGACGGCGGCGCTGCGGCGGAATGTCGA
CGGCCTCAGCGCCGCCATCGCTGCCGAAGACGCGCGCGCCGACCAGCTGC
GGCGGCGCGTCGCCGGCGCCACGGGCGACGCGCTGCAGCGACAGGAAGCG
CTGCTCCGCGAGCTGAACCTGAAGGTGAAGGAAGTCTACGAGCAGTGCGA
GTTCGACGCCGGCTCCAAGCCGACGACACTGTTCATGCTGAGCGATTTGG
AGGCGCGGCTCGAGGACCTGCTAGCGGCCATCGCACAGATGCCCGAGGAG
TACGTGGCGCGCGCCGAGAAGGAGAAGGAGAAGCGCCGCCGCAGCAAAAA
GCGCGCTGAGCAGCAGGCGGAGATGGAGCTGGCGCAGGAGGAGCGGAACC
GCAAGGCCATTCAGCGGTCGCTGCAGGCGCCCAGGCGACGCACCGGGCGG
CCCGTCATGTTCCGTTCGCGCCTCGTGCGGCAGGAGAAGCGCGAGGACAA
G
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