mRNA_P-wetherbeei_contig1584.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1584.1.2
Unique NamemRNA_P-wetherbeei_contig1584.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Match: D8LSB1_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB1_ECTSI)

HSP 1 Score: 582 bits (1501), Expect = 2.370e-193
Identity = 334/720 (46.39%), Postives = 430/720 (59.72%), Query Frame = 3
Query:  300 AIDVSFGGGCSNDCSGHGSCSDLQVQICQCYVGWAGRDCSQRLCPAATAWADYATAADTAHAALTECAGMG------------SGGT------------CSEHGRCTSMREAAEQVDYRNFFYEGTYDGWDADMIFGCACDPGYTGYDCSQRSCPYGPDPI-DMTTADDVQIVDCTCPATCSGSILLSFMGQITREIPHDATAELVEFRLEELSTTIDVSVSFDGGNTALCSAA-GTAASVTFLRPSVPRLSGVHWNLTAVNSTLASSGSSASPLVEVYSAGASSAVNASVGSVWGTVVDYECNRRGRCDRTSGLCLCYEDFGSSDGTGGEGSVGDCGYVNSSSLPTDCSAVIPSWDLTATAAACSGAGTCSGSSDLLCECDSGYGGWACDLMTCPNSTAWFDEAVDGVGHAA--GTT-----CANGGTCEGSDGTCTCATGLFEGLACDLMQCVSNCSTLGLCHTMAELAANSFDYQRQPQAWSYSLWDADMVTGCDCNRSLAVDNALSLNSTTFRGPYAFADTDSFGYDCSLARCPRGDDPLTAGVNEVQRISCIGGFGTFTLAFRGAETVELQYDASADDVEAALGALSTLRNVAVTFEDDDVTTACAVPAASMLVEFITETGDLPILVAEFSNLFESSALSSLAAAGVMSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQSADDNGTAWGNRGDCGWRNDAQTELYRGAGRA 2360
            ++ V FGGGC + CSGHG C+    + C C+ GWAG DCS RLCP+  AW D+ATA +TAHAA TEC+ MG            +G T            C+  GRC SMREAA  +D  +  +EG YDGWDADMI+GC CD G+ GYDCS+RSCP G DP  D+   D+ Q++DC CP  CSGS+LL+F G  TR IP DA+AELV++RLEEL T   VSV+  G    +CS   G  + V FL    P LS    N+TA  ++LAS+  +  P V VY+ G +S +N  + S  GT    EC+ RG C+R +G C+CY  F SSDG GGEG +GDCGY +S   PT+C+   P W   +T+A CSG G C       C C   Y G AC+L  C +  AWF+EA   V   A  G T     C+ GG C+ S G C+C +G+F G AC++M C + C+ +G C  M   AA         + ++Y LWDA+ +  C CNRS+ VDN  S  STT RGPYA ADTDS GYDCSL RCP GD   T GV ++QR++C  G G FTL+FRG  TVEL Y  SA  +EAAL A   + +V VT+     TT+       + +EF+TE GDLP++ +    L  +   +     G+++V +V  GTREDVEC AHG+C    G C C+VGYQS D  G++ G RGDC WRN  QT L+ G+G A
Sbjct:   94 SVSVGFGGGCPSACSGHGYCTGPSTETCACHQGWAGGDCSIRLCPSGAAWVDHATANNTAHAAYTECSNMGVCDRATGLCSCRTGFTGEACQRMECLNDCNGRGRCMSMREAAALIDGDSLEFEGVYDGWDADMIYGCLCDDGWEGYDCSKRSCPKGVDPFPDIVGEDEEQLIDCYCPGQCSGSLLLAFRGHSTRPIPFDASAELVKYRLEELDTVDVVSVNITGIGGMICSGNDGITSRVAFLLQHGP-LS----NMTADVASLAST--TDDPSVVVYAKGHASGLNPHLFSQIGTKDAKECSDRGSCNRQTGHCMCYSKFSSSDGMGGEGDMGDCGYYDSYDPPTNCTTATPMWG--STSALCSGVGNCD-QETWRCNCTESYTGGACELRDCDSGVAWFEEAAWNVSSGAEGGRTGLSVQCSAGGVCDESTGICSCRSGMFAGDACEVMDCPT-CNDVGTCKDMEYFAATIISNGEAQEGYTYDLWDANKMRSCWCNRSMTVDNMFSGISTTHRGPYALADTDSHGYDCSLGRCPTGDHYHTPGVTDIQRVNCTAGLGVFTLSFRGETTVELDYFISAAGLEAALEATPWILDVNVTYTSG--TTSACNDTEYIDIEFLTENGDLPLIKSSTDFLLRTDGTTP----GLVTVEKVQTGTREDVECGAHGICVEEEGVCDCFVGYQSGDGTGSS-GERGDCSWRNKYQTALFTGSGVA 795          
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Match: F0XX10_AURAN (EGF-like domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX10_AURAN)

HSP 1 Score: 482 bits (1240), Expect = 2.460e-154
Identity = 317/749 (42.32%), Postives = 411/749 (54.87%), Query Frame = 3
Query:  339 CSGHGSCSDLQV----QICQCYVGWAGRDCSQRLCPAATAWADYATAADTAHAALTECAGMGS-------------------------------GGT---CSEHGRCTSMREAAEQVDYRNFFYEGTYDGWDADMIFGCACDPGYTGYDCSQRSCPYGPDPIDMTTADDVQIVDCTC--PATC-SGSILLSFMGQITREIPHDATAELVEFRLEELSTTIDVSVSFDGGNT--ALCSAAGTAASVTFLRPSVPRLSGVHWNLTAVNSTLASSGSSASPL----VEVYSAGASSAVNASVGSVWGTVVDYECNRRGRCDRTSGLCLCYEDFGSSDGTGGEGSVGDCGYVNSSS-----LPTD--------------CSAVIPSWDLTATAAACSGAGTCSGSSDLLCECDSGYGGWACDLMTCPNSTAWFDEAVD---GVGHAAGTTCANGGTCEGSDGTCTCAT--GLFEGLACDLMQCVSN----CSTLGLCHTMAELAANS--FDYQRQPQAWSYSL-WDADMVTGCDCNRSLAVD-----NALSLNSTTFRGPYAFADTDSFGYDCSLARCPRGDDPLTAGVNEVQRISC-IGGFGTFTLAFRGA-ETVELQYDASADDVEAALGALSTLRNVAVTFEDDDVTTACAVPAASMLVEFITETGDLPILVAEFSNLFESSALSSLAAAGVMSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQSADDNGT---AWGNRGDCGWRN 2321
            CSGHG C++       + C C  G+ G DCS R+CPA  AW+DYATA +TAHAA  EC+ MGS                               GG    C   G C SM EAA QVDY +  ++  YDGWDA MI+GCACD G+ GYDCS+R CP G DP+     D+VQ++ C C  P  C +G+I L+F GQ T  IP DATAEL+EF LE LST  DV V++ GG    +LCS AGT A++TFL            +L A+N+T A  G++  P     V +   GA S V+A+V SV GT    EC+ RG CDR+ G+C CY  FGSSDG GG G V DCGY++ ++      P D              C    P W+       CSG G C   +D  C C +GY G AC+  TCP   AW+ EAV    G  H  G TC+N G C+ S G C C    G+  G AC  M C  N    C   G C TMAELA N+  F    + +  +YS  WDAD+VTGC C+ S +        A  +N   +RGP+A+  T   GY CS A CP GD+P T GVNEVQ ++C +   G F + FRGA E V + + ASA ++EA L AL T+R+VAV+  +     +   P   + VEF++E GDLP+LV   ++              V++VTEVT GT+EDVEC+A+G+C+  IG C+C  G+ S  D+G    A+G RGDCG+R+
Sbjct:   26 CSGHGHCAEGVAPGVDETCACDGGYGGADCSLRICPAGVAWSDYATANNTAHAAHFECSNMGSCDRESGLCECRAGFAGEACQRMRCPHGARLAGGAPLECFGVGTCLSMAEAAAQVDYVSLEHDAAYDGWDASMIYGCACDAGFAGYDCSERECPRGDDPL-TAGVDEVQLLTCDCGEPGGCGNGTIALAFRGQRTAPIPADATAELLEFHLERLSTLGDVDVAYYGGGLDGSLCSDAGTTAAITFLT--------TRGDLPALNATWAIEGTTYGPGRRADVRLAVDGACSTVHAAVCSVAGTRERAECSNRGVCDRSVGVCDCYTGFGSSDGRGGAGLVADCGYLSPNASVAYEYPRDYARWADAAGGAEGPCPRATPLWNTNLPPTVCSGVGVCD--ADKFCNCTAGYEGSACEYKTCPTGRAWWGEAVGDDPGDAHRPGATCSNKGLCDRSSGNCDCDDDFGVVGGDACGDMACEVNSTRECGAFGHCATMAELAQNALLFGDHGEVRRVNYSEPWDADLVTGCKCHASTSDYPTHDFGADPVNQLQYRGPFAYTYTGWTGYQCSHAFCPTGDNPYTWGVNEVQALNCSLATDGAFNVTFRGAPEPVRVPWWASAAELEARLEALPTIRDVAVSLRNVSYNASVCGPGQRVYVEFLSEHGDLPLLVVSEADDLRHDV--------VVNVTEVTKGTKEDVECSANGICNREIGICACLDGFASGADDGEPLGAYGQRGDCGFRH 755          
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Match: A0A7S3JTR5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTR5_9STRA)

HSP 1 Score: 474 bits (1221), Expect = 9.960e-152
Identity = 300/744 (40.32%), Postives = 401/744 (53.90%), Query Frame = 3
Query:  339 CSGHGSCSDLQV----QICQCYVGWAGRDCSQRLCPAATAWADYATAADTAHAALTECAGMG---------------SGGTCSE------------------HGRCTSMREAAEQVDYRNFFYEGTYDGWDADMIFGCACDPGYTGYDCSQRSCPYGPDPIDMTTADDVQIVDCTCP--ATCSGSILLSFMGQITREIPHDATAELVEFRLEELSTTIDVSVSFDGGNT--ALCSAAGTAASVTFLRPSVPRLSGVHWNLTAVNSTLASSGSSASPLVEVYSAGASSAVNASVGSVWGTVVDYECNRRGRCDRTSGLCLCYEDFGSSDGTGGE--GSVGDCGYVNSSSL---------------PTDCSAVIPSWDLTATAAACSGAGTCSGSSDLLCECDSGYGGWACDLMTCPNSTAWFDEAV--DGVGHAAGTTCANGGTCEGSDGTCTCAT--GLFEGLACDLMQCVSN----CSTLGLCHTMAELAANSFDYQRQPQAW---SYS-LWDADMVTGCDCNRSLAVDNALSLNSTTFRGPYAFADTDSFGYDCSLARCPRGDDPLTAGVNEVQRISCIGGFGTFTLAFRGAET-VELQYDASADDVEAALGALSTLRNVAVTFEDDDVT-------TACAVPAASMLVEFITETGDLPILVAEFSNLFESSALSSLAAAGVMSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQSADD-----NGTAWGNRGDCGWRN 2321
            CSGHG C++       + C C+ G+ G DCSQR+CP+  AW DYATA +TAHA  TEC+ MG                G  C                    HGRC SMREAA Q DY + +Y  TYD WDADMIFGCACD G+ GYDCS+  CP G DP+     D++QI+DC C   ++C+G++ L+F GQ T+ IP DAT ELVE+ LE+LST  D+ ++F GG    +LC   GT A +TFL          H ++ ++N TL    +  +P + +++ G +SA+  ++ SV GT  + EC+  G CD  +G CLCY  F SS+G G    G +GDCG +  +S                   C AV+P W  ++  A CSG G C    D  C C  GY G AC+  TCP   AW+DEA       H + + C+  G C  +DGTCTC     LF+G  C+   C  N    CS  G C TMAE A  +     +  A    +YS  WDA+ V  C C++S  V +  + +S  +RGP+A+A TD  GY CS A CP GD+P T G NEVQ I+C    G+F ++FRGA+  V + +++  D VE  L +L T+RNV VTF D           T C      +++EFI+E GDLP+L  + S L            G  ++TEV  GTREDVEC+A GVC+  IG C+C  G+ S  D        A G RGDCG+R+
Sbjct:   27 CSGHGHCAEDVTTGLDETCVCWDGYTGPDCSQRVCPSGRAWIDYATANNTAHAEYTECSNMGYCVYETGLCSCRDGFEGAACDRMRCPLALTQTGQKVECAGHGRCLSMREAAVQQDYISLWYSATYDDWDADMIFGCACDKGFGGYDCSEYLCPKGDDPL-TPGVDEIQIIDCICTIGSSCNGTLALTFRGQTTKPIPMDATPELVEYYLEQLSTINDIEITFSGGERDFSLCDEFGTTALITFLTE--------HGDVPSLNYTLYPGKAGINPQISIFTDGTASALRPALESVMGTKEEAECSNHGTCDTATGQCLCYRGFTSSNGLGRNEAGVLGDCGAIEQNSTIYISFDLVEYPNATQDIPCPAVVPRWSASSGIAICSGVGNCL--PDRTCNCTDGYEGNACEFKTCPTGEAWWDEAEFNGDRAHRSDSVCSARGLCNRNDGTCTCDAEWSLFDGNNCNQFACYVNITDECSGNGRCATMAEFAQEALMIGSESGARIPVNYSDAWDANRVRSCLCDKSPGVWD-YNTSSNAYRGPFAYAYTDWTGYSCSHAFCPTGDNPFTWGENEVQAINCSATDGSFNVSFRGADPPVRIPWNSHVDKVELELESLPTIRNVLVTFADPTGANTTTINQTVCKQGGQYVIIEFISERGDLPLLYIDDSEL-----------TGETNITEVIKGTREDVECSAAGVCNREIGICNCLDGHYSGADVVPFRELGAVGQRGDCGFRH 747          
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Match: A0A8J2SRV2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRV2_9STRA)

HSP 1 Score: 384 bits (986), Expect = 9.850e-117
Identity = 287/777 (36.94%), Postives = 393/777 (50.58%), Query Frame = 3
Query:  339 CSGHGSCSDLQV----QICQCYVGWAGRDCSQRLCPAATAWADYATAADTAHAALTECAGMG---------------SGGTCSE------------------HGRCTSMREAA-EQVDYRNFFYEGT-YDGWDADMIFGCACDPGYTGYDCSQRSCPYGPDPIDMTTADDVQIVDCTC--PATCSGSIL-LSFMGQITREIPHDATAELVEFRLEELSTTIDVSVSFDGGNT--ALCSAAGTAASVTFLRP--SVPRLSGVHWNLTAVNSTLASSGSSASPL-VEVYSAGASSAVNASVGSVWGTVVDYECNRRGRCDRTSGLCLCYEDFGSSDGTGGEGSVGDCGYV----------------------NSSSLPTD--CSAVIPSWDLTATAAACSGAGTCSGSSDLLCECDSGYGGWACDLMTCPNSTAWFDEAVDGVGHAAGTTCANGGTCEGSDGTCTCAT--GLFEGL-----ACDLMQCVSN---CSTLGLCHTMAELAANSFDYQRQP--QAWSYS-LWDADMVTGCDCNRSLAVDNALSL-----------NSTTFRGPYAFADTDSFGYDCSLARCPRGDDPLTAGVNEVQRISCIGGFGT-FTLAFRGAE-TVELQYDASADDVEAALGALSTLRNVAV---------------TFEDDDVTTACAVPAASMLVEFITETGDLPILVAEFSNLFESSALSSLAAAGVMSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQSADD----NGTAWGNRGDCGWRN 2321
            CSGHG+C++       + C C  G++G DCS RLCPAA AW+DYA+A +TAHA   ECA MG               SG  C                    +GRC SMR+AA E +D+ +   + T YD WDADM++GC CD G+ G+DCSQR CP G DP+     D+VQ+V+CTC     CS + L L+F GQ T  IP DATA+L+E+ LE+LS+  DV V +DGG    +LCSA GT A + FLR    VP L   ++   A+       G +  P+ + +   G  S+++++  SV GT    EC+ RG CD  SG C CY  F SSDG GG GS GDCG++                         S P D  C  V+P+W+       CSG G C   +D  C C  GY G AC+   CP+  AW+DEAV          C++ G C  + G C C    GL  G      AC+++ C  N   C   G C TMAELA N   Y      Q  +YS +WD+ M+ GC C +   V +                S   R P+AFA T+  G  CS A CPRGD+P T G NE+Q+I+C       F L F  +  +V + + A+A ++E  L  L TLR+V V                +E++ V   C     +  VEFI++ GD+P+LVA  S         SL     ++++E   GT+E+VEC+ +G+C+  +G C+C  G+ S+ D        +G RGDC +R+
Sbjct:   30 CSGHGACAEHVSKGIDETCVCDYGFSGPDCSLRLCPAARAWSDYASANNTAHAKHVECANMGDCDRDTGLCECRDGFSGDACQRMRCPTGTLTGSPPRECYGYGRCISMRDAAREDMDWVSIHRKSTTYDEWDADMLYGCVCDAGFQGWDCSQRICPKGDDPL-TPGEDEVQLVECTCLEAGGCSNNTLSLTFKGQRTDPIPADATADLLEYFLEKLSSITDVDVHYDGGGELGSLCSAGGTTARIAFLRDYGDVPSL---NYTTKALRP-----GEAGIPISMNIKKNGQCSSLHSTTCSVRGTKEYAECSNRGICDSRSGRCTCYTGFSSSDGRGGSGSYGDCGHLLPNTTIEWREDTQPKDYNKPWYRDMSNPVDGPCPRVVPAWNPNLGPTICSGVGICD--ADKKCNCTEGYEGNACEYKICPSGRAWWDEAVGPNDAHHEVPCSHRGFCNRASGYCECDREFGLVGGPSSSTEACNVLNCDENKTMCGQTGYCATMAELAVNGIHYNEDGTLQKVNYSDMWDSHMIRGCHCLKPEGVYHTSGFVHARNRHLPRGGSRMARPPWAFALTEWTGRTCSQAFCPRGDNPFTFGQNEIQQINCSAPTQDHFNLTFGLSNVSVRIPWHATAKELELRLETLPTLRDVNVWYANSTTPGGFIDLKNYENESV---CGRDQLAY-VEFISDRGDVPMLVATTSPY-------SLI---TLNISEWRKGTKENVECSGNGLCNRDVGVCNCLDGFASSSDVKKEKFGEYGERGDCAFRH 781          
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Match: A0A5D6XF23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF23_9STRA)

HSP 1 Score: 379 bits (974), Expect = 1.130e-116
Identity = 257/700 (36.71%), Postives = 352/700 (50.29%), Query Frame = 3
Query:  327 CSNDCSGHGSCSDLQVQICQCYVGWAGRDCSQRLCPAATAWADYATAADTAHAALTECAGMG----SGGTCS------------------EHGRCTSMREAAEQVDYRNFFYEGTYDGWDADMIFGCACDPGYTGYDCSQRSCPYGPDPIDMTTADDVQIVDCTCPATCSGSILLSFMGQITREIPHDATAELVEFRLEELSTTIDVSVSFDGGNTALCSAAGTAASVTFLRP--SVPRLSGVHWNLTAVNSTLASSGSSASPLVEVYSAGASSAVNASVGSVWGTVVDYECNRRGRCDRTSGLCLCYEDFGSSDGTGGEGSVGDCGYVNSSSLPTDCSAVIPSWDLTATAAACSGAGTCS---GSSDLLCECDSGYGGWACDLMTCPNSTAWFDEAVDGVGHAAGTTCANGGTCEGSDGTCTCATGLFEGLACDLMQC---VSNCSTLGLCHTMAELA-ANSFDYQRQPQAWSYSL-----WDADMVTGCDCNRSLAVDNALSLNSTTFRGPYAFADTDSFGYDCSLARCPRGDDPLTAG-VNEVQRISCIGGFGTFTLAFRGAETVELQYDASADDVEAALGALSTLRNVAVTFEDDDVTTACAVPAASMLVEFITETGDLPILVAEFSNLFESSALSSLAAAGVMSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQSADDNGTAWGNRGDCGW 2315
            C   CSGHG+C D     C+C+ G+ G  C    CP   AWADYA+A D AH  + EC+ MG    + G C                    +GRC SMREAAE +D  NFF   TY+ WDAD IFGC CD G+TG+DCSQR CP G DP+      +VQ + CTC   C+GS  L+F  + T  +    +A  ++  LE+L T   V+V+   G T LCSA GT   +TF     +VP L         + + LA  G +A+P + + +               GT  +  C+ RG CD  SG+C C   F  S+G G  G+ GDCG+  +++ PT    V            C+G G C    G+    C C+ G+ G+ C L TCP   AWFD A       A   C+N GTC+   G+C C   LF G ACD+++C    + C+  G C TM +LA A++ + +     +  +L     WDA  + GCDC ++             + GPYA A  +   YDCS   CP G DP  AG VNE Q ++C    G F L FR   T  + +DASA  ++ AL +L T+  V+VTF     T      A    +EF TE GDLP+L A  + L+ S+   S+       V EV AGT+ + EC++ G+CD + G C C+  + S+D +G   G RGDCG+
Sbjct:   22 CDGTCSGHGAC-DGNTGKCKCFAGYIGTSCKHMSCPQGVAWADYASATDVAHD-MAECSNMGLCDRNAGVCKCQAGFEGVACERMSCPTCTNGRCVSMREAAEILDNTNFFVATTYNLWDADKIFGCQCDNGFTGFDCSQRECPKGDDPMTTGQVAEVQQLACTCDG-CTGSFALTFRRRTTANLLPGDSAAALKSALEKLDTISGVTVTIGAGAT-LCSAGGTTTQITFTNNPGNVPTL--------LLQNRLA--GGAATPSLAITT------------PTPGTREEAYCSNRGMCDLGSGICACNTGFTGSNGAGAAGTRGDCGFGTATACPTVNGVV------------CNGQGVCDNTGGAPTFRCSCNVGFTGFDCSLRTCPQGVAWFDGATAPDTAHAMAPCSNRGTCDTKSGSCACGA-LFTGSACDVLKCPGAATPCNGHGTCKTMQQLALASARNGELLGVTYGATLNVASTWDAGKIQGCDCTKNY------------YLGPYAGALGEFRDYDCSARFCPLGADPYEAGRVNEKQTLACRAENGWFALTFRQFTTPRIAFDASAVTLKTALESLPTIDAVSVTFAGGATTPCGGAAAIVTTIEFTTEQGDLPLLTASTAALYHSTVTPSVV------VAEVQAGTKANAECSSRGICDRTTGVCQCFNYFLSSDGDGNV-GVRGDCGF 663          
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Match: A0A6G0WQJ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQJ7_9STRA)

HSP 1 Score: 372 bits (956), Expect = 1.270e-113
Identity = 251/698 (35.96%), Postives = 347/698 (49.71%), Query Frame = 3
Query:  339 CSGHGSCSDLQVQICQCYVGWAGRDCSQRLCPAATAWADYATAADTAHAALTECAGMG----SGGTC------------------SEHGRCTSMREAAEQVDYRNFFYEGTYDGWDADMIFGCACDPGYTGYDCSQRSCPYGPDPIDMTTADDVQIVDCTCPATCSGSILLSFMGQITREIPHDATAELVEFRLEELSTTIDVSVSFDGGNTALCSAAGTAASVTFLRP--SVPRLSGVHWNLTAVNSTLASSGSSAS---PLVEVYSAGASSAVNASVGSVWGTVVDYECNRRGRCDRTSGLCLCYEDFGSSDGTGGEGSVGDCGYVNSSSLPTDCSAVIPSWDLTATAAACSGAGTCSGSSDLLCECDSGYGGWACDLMTCPNSTAWFDEAVDGVGHAAGTTCANGGTCEGSDGTCTCATGLFEGLACDLMQCVSN---CSTLGLCHTMAELA--------ANSFDYQRQPQAWSYSLWDADMVTGCDCNRSLAVDNALSLNSTTFRGPYAFADTDSFGYDCSLARCPRGDDPLTAG-VNEVQRISCIGGFGTFTLAFRGAETVELQYDASADDVEAALGALSTLRNVAVTFEDDDVTTACAVPAASMLVEFITETGDLPILVAEFSNLFESSALSSLAAAGVMSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQSADDNGTAWGNRGDCGW 2315
            C+GHG C+    ++CQC  G+ G  C    CP   AWADYA A DTAH  L  C+ MG    + G C                   ++GRC S+R+AA+  D  NFF   TY  WDAD I GC CD G++GYDCSQRSCP G DP+      +VQ + C C   C+GS +LS+ G  T  I   ATA  ++  +  L     V+V+  G  + +C + G  +S+TF +   +VP L   +  LT   S ++   S       +++ +  GA+   ++   +  GT     C+ RG C+  +GLCLC   FGSSDG G  G++ DCG+  S+   T C  V        +  AC+G GTCS ++   C C++G+ G  C    CP   AWFD         A   C+N GTC  S G C CATG F G AC+L+ C  +   C+  G C TM +LA        A  F Y   P     S WD + + GC C++  ++            GP+  ++ D   YDCS   CP G DP   G V+E Q I+C    G+FTL+FR   T  +   A+   V+AAL AL T+    VTF      T C+       + F    G LP++VA   +L  S +     AA  ++VTE   GT+ + EC+  G C+ + G C CY G+ S+D NG   G RGDCG+
Sbjct:   25 CNGHGVCNPT-TRLCQCMQGYTGNRCEFASCPTGLAWADYAIATDTAHQ-LAVCSNMGLCDPTSGLCVCRSGFEGPACEYMSCPPCQNGRCISLRDAAQSQDDVNFFTTTTYSLWDADKILGCQCDYGFSGYDCSQRSCPVGDDPLTTGQFPEVQQLSCLCNG-CTGSFVLSYQGFYTVNISPTATAATLQTAINNLIPIQGVTVTLSGSGSTVCDSDGAVSSITFTKNGGNVPSLRVTNL-LTGGTSAISIQSSWLLFYLTILKCHQGGATGLYDSVAATYDGTTESAVCSNRGLCNPATGLCLCQPGFGSSDGAGNAGTIPDCGHQISA---TTCPLV--------SGIACNGQGTCSAATQYKCVCNAGFKGMDCSQRICPLGIAWFDGPTAQDKAHAMAVCSNKGTCNPSTGLCGCATG-FTGAACELLSCPGSPATCNGQGQCKTMQQLAQLASINGAAQGFTYGNTPNL--ASTWDFNKIQGCACSQHASM------------GPFVGSNDDFIAYDCSFRACPTGADPYETGKVDEQQTITCTADGGSFTLSFRQYTTASISASANLPTVQAALQALPTIVTATVTFSTGS--TVCSTSGVVTTIIFAYAQGPLPLIVASSGSLTLSGS-----AAPPITVTETVVGTKANAECSRRGSCNRATGACQCYDGFYSSDGNGNP-GTRGDCGY 684          
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Match: A0A7S2WEC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEC7_9STRA)

HSP 1 Score: 373 bits (958), Expect = 2.510e-112
Identity = 273/778 (35.09%), Postives = 372/778 (47.81%), Query Frame = 3
Query:  330 SNDCSGHGSCSDLQV----QICQCYVGWAGRDCSQRLCPAATAWADYATAADTAHAALTECAGMG-----------------------------SGGTCSEHGRCTSMREAAEQVDY---RNFFYEG--------TYDGWDADMIFGCACDPGYTGYDCSQRSCPYGPDPIDMTTADDVQIVDCTCPAT-CSG--SILLSFMGQITREIPHDATAELVEFRLEELSTT-----------IDVSVSFDGGNTALCSAAGTAASVTFLRPSVPRLSGVHWNLTAVNSTLASSGSSASPLVEVYSAGASSAVNASVGSVWGTVVDYECNRRGRCDRTS-------GLCLCYEDFGSSDGTGGEGSVGDCGYV--NSS-------------------SLPTDCSAVIPSWDLTATAAA-CSGAG-TCSGSSDLLCECDSGYGGWACDLMTCPNSTAWFDEAVDGVG-HAAGTTCANGGTCEGSDGTCTCATGLFEGLACDLMQCVSN----CSTLGLCHTMAELAANSFDYQRQPQAWSYSL-WDADMVTGCDCNRSLAVDNAL---SLNSTTFRGPYAFADTDSFGYDCSLARCPRGDDPLTAGVNEVQRISCIGGFGTFTLAFRGAETVELQYDASADDVEAALGALSTLRNVAVTFEDDDVTTACAVPAA------SMLVEFITETGDLPILVA---EFSNLFESSALSSLAAAGVMSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQSADDN---------GTAWGNRGDCGWR 2318
            +  CSGHG C   +       C C+ G+ G DCS R+CPA TAWA   +A  TAH    EC+G G                             S  +CS HG C SMREAAEQV +   R    +G        +YD WDADMI GC CDPGY G DCS RSC  G DP+ +   +++Q++DCTC +  C    +  L F GQ T  I  + + +L+ +  E L T            +D   +    +  LCS +G A ++ FLR         H +L A+      S SS+  +  V   G SS+V   V +  G   +  C+ RG CDR         G C C+E F  SDG G  G   DCG+   N+S                   S    C  V P ++  +T    CSG G  CS ++   C C +GY G+ C    CP S +WFDE++   G H    TC +GG C+ S G C+C   ++ G AC+   C  N    C   G C ++A +A  + D Q QP   +Y+  WDA  +  C C+R   +  A    ++N+  + GP+A +   + GYDCS   CP GDD  TAG NEVQ + C GG GTF LAFRG  TV + Y+AS  D++ AL +L ++R VAV+F+  +       P        S  VEF++E GDLP+LV    E  N  E    +S    G   VT  T+G +ED+EC   G+C+   G C+C  G+ S   +           A G+RGDCG+R
Sbjct:   72 AQQCSGHGICKTTEFLNLSYNCHCFHGYTGADCSLRVCPAGTAWAAVPSANSTAHPPHVECSGFGHCNRQTGECKCKTGYTGEACQRLRCPVDSSSRSCSGHGTCISMREAAEQVRHPWNRASPMQGLVRLEEVSSYDDWDADMIHGCLCDPGYEGSDCSLRSCAVGHDPM-VNGTNELQVLDCTCASGGCKDGDTFRLQFRGQSTPRIGFNDSIDLLVYHFERLPTVTRGGLEVVSYGLDSKGNLTSVSPVLCSDSGVATTIRFLRE--------HGDLPAIQ---VQSASSSLVMQVVKGTGNSSSVFPWVNATTGDKTELACSGRGVCDRRGHEGVSQPGQCACFEGFEGSDGQGKAGLAPDCGHFAPNASRRLAVWTDAYFDEASDVLASEEVGCPMVAPIFNYPSTTKLLCSGVGGNCSEATGYTCNCSAGYTGYGCQYRQCPASRSWFDESLPEYGAHRLAATCGDGGNCDESTGRCSCNE-VYTGTACEKTSCAVNGTTTCGQHGQCASIATMARFALDDQGQPAPGNYTEPWDAFKMRTCLCSRLRGLGMASLASTINNNVYVGPFAHSTVAAAGYDCSRFECPTGDDVYTAGWNEVQEVHCRGGGGTFQLAFRGFPTVPIAYNASESDIQDALESLPSIRKVAVSFDRGNEFAQACFPGMDSSKNHSFFVEFLSEFGDLPLLVPSVQEPGNGVELLLGNSSGTVGSARVTIHTSGNKEDLECGGQGICNVDHGTCACLAGFGSGSGSELAGRASLGANALGHRGDCGFR 836          
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Match: A0A6G0WQF1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQF1_9STRA)

HSP 1 Score: 365 bits (936), Expect = 8.630e-111
Identity = 256/711 (36.01%), Postives = 352/711 (49.51%), Query Frame = 3
Query:  339 CSGHGSCSDLQVQICQCYVGWAGRDCSQRLCPAATAWADYATAADTAHAALTECAGMG----SGGTCS------------------EHGRCTSMREAAEQVDYRNFFYEGTYDGWDADMIFGCACDPGYTGYDCSQRSCPYGPDPIDMTTADDVQIVDCTCPATCSGSILLSFMGQITREIPHDATAELVEFRLEELSTTIDVSVSFDGGNTALCSAAGTAASVTFLRP--SVPRLSGVHWNLTAVNSTLASSGSSASPLVEVYSAGASSAVNASVGSVWGTVVDYECNRRGRCDRTSGLCLCYEDFGSSDG-----------------TGGEGSVGDCGYVNSSSLPTDCSAVIPSWDLTATAAACSGAGTCSGSSDLLCECDSGYGGWACDLMTCPNSTAWFDEAVDGVGHAAGTTCANGGTCEGSDGTCTCATGLFEGLACDLMQCVS---NCSTLGLCHTMAELAANSFDYQRQPQAWSY------SLWDADMVTGCDCNRSLAVDNALSLNSTTFRGPYAFADTDSFGYDCSLARCPRGDDPLTAG-VNEVQRISCIGGFGTFTLAFRGAETVELQYDASADDVEAALGALSTLRNVAVTFEDDDVTTACAVPAASMLVEFITETGDLPILVAEFSNLFESSALSSLAAAGV--MSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQSADDNGTAWGNRGDCG 2312
            C+G G C+    ++CQC +G++G  C    CP+  AWAD A A +TAH  +  C+ MG    + G C+                   +GRC SMREAA+  D  N F   TY  WDAD I GC CD G+TGYDCSQR+CP G DP+      +VQ + C C   C+GS +LS+ G  T  +P  AT   ++  + +L     V+VS  G  + +C + G  +S+TF     +VP L      LT+    L + G+SA   + + S+GA+   +    +  GT     C+  G CD ++GLC C   F SSDG                  G  G++ DCGY      PT C    P          C+  GTC+  +   C C +GY G  C   TCP+  AWFD A       A   C+N G C  + GTCTC  G + G AC+ M C     NC+  G C TM  LA  +       Q ++Y      S WDA+ + GC CN+              + GPYA   T   GYDCS   C RG DP   G V+EVQ I+C+G  G FTL FR   T ++   A+   V+AAL AL ++R+  V+F     +T C+       V+F    GDLP+LV  F++L       +L++AG   ++V E TAGT+ +VEC+  GVC+ + G C CY G+  +D NG + G R DCG
Sbjct:   25 CNGRGICNPT-TRLCQCALGYSGPRCELVACPSGVAWADLAIATNTAHQ-MAVCSNMGICNEATGVCTCNAGFEGLACEFMSCPSCTNGRCLSMREAAQSQDDSNLFTTTTYSLWDADKIRGCKCDFGFTGYDCSQRTCPTGDDPLTTGQVPEVQQLSCLCNG-CTGSFVLSYQGFNTVNLPPTATVSALQNAINDLIPIHGVTVSLSGTGSTICDSDGAVSSITFTHNGGNVPSL-----RLTS----LLTGGTSA---ISIQSSGATGLYDGVGNTNDGTTESAVCSNHGLCDSSTGLCTCQPGFSSSDGKLNAHEKIPKSKIRCKGAGSSGTIPDCGY---GLAPTTCPVTNPG------GLVCNNHGTCNAGTSYKCICAAGYTGVDCSQRTCPSGIAWFDGATTTNTAHAMAVCSNKGICNKALGTCTCQAG-YSGSACEFMTCPGTNGNCNGQGTCMTMQSLAQMA-TVNGVVQGYTYGSPSTPSTWDANKIQGCYCNQK------------AYFGPYAATLTKYIGYDCSTRACLRGSDPYETGKVDEVQSITCLGDGGWFTLTFRQYTTSKIAASANVATVQAALEALPSIRSAIVSFSGG-ASTVCSSAGVVSKVQFTFTQGDLPLLVPAFASL-------TLSSAGTPNVAVVETTAGTKSNVECSNRGVCNRATGSCQCYNGFLPSDGNGGS-GVRADCG 688          
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Match: A0A2R5GIT2_9STRA (Tenascin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIT2_9STRA)

HSP 1 Score: 360 bits (924), Expect = 9.670e-110
Identity = 243/681 (35.68%), Postives = 329/681 (48.31%), Query Frame = 3
Query:  525 CSEHGRCTSMREAAEQVDYRNFFYEGTY-DGWDADMIFGCACDPGYTGYDCSQRSCPYGPDPIDMTTADDVQIVDCTCPATCSGSILLSFMGQITREIPHDATAELVEFRLEELSTTIDVSVSFDGGNTALCSAAGTAASVTFLRP--SVPRLSGVHWNLTAVNSTLASSGSSASPLVEVYSAGASSAVNASVGSVWGTVVDYECNRRGRCDRTSGLCLCYEDFGSSDGTGGEGSVGDCGYVNSSSLPTDCSAVIPSWDLTATAAACSGAGTCSGSSDLLCECDSGYGGWACDLMTCPNSTAWFDEA----------------------------------VDG---------------------------------------VGHAAGTTCANGGTCEGSDGTCTCATGLFEGLACDLMQCVSNCSTLGLC---HTMAELAANSFD---YQRQPQAWSYSLWDADMVTGCDCNRSLAVDNALSLNSTTFRGPYAFADTDSFGYDCSLARCPRGDDPLTAGVNEVQRISCIGGFGTFTLAFRGAETVELQYDASADDVEAALGALSTLRNVAVTFEDDDVTTACAVPAASMLVEFITETGDLPILVAEFSNLFESSALSSLAAAGVMSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQSADDNGTAWGNRGDCGWRN 2321
            C+ HG+C S+++AA   D RNFF E TY   W+A  I+GC C+PG+ GYDCS++ CP G DP+     D+VQ++DCTC  TCSG+  LSF G++   I  D +A  V+  LE       V+V+F GG TA+C   G + ++TF      +P+L     +LT          S A+  +E+  +G +SA    V SV GT  D  CN RG CD ++G C CY  F SSD  G  G  GDCG+  ++S P             A              SD  C C  GY G  C+  TCP   AWF EA                                  ++G                                       + H  GT C+  G C+   GTC+C  G F G AC    C S+CS  G C      AE   ++FD   Y       +   WD+DM+ GC C++ L  D  +                DSFG+DCS   CP GDDP T+GV+E Q I+C    GTFTL FR   T  + ++A+A D+++AL AL T+  V+VT+  D  T AC+    +M + F+TE GDLP LV + S+L   SA ++        VT  T GTRE+ EC+ HG+CD + G CSC+ GY S+D +G A G+RGDCG R+
Sbjct:    7 CNNHGQCVSLKDAARLKDDRNFFREVTYATSWEATRIYGCMCEPGWYGYDCSKKECPRGDDPMTTGQVDEVQVIDCTCSNTCSGNFYLSFKGEVAGPISFDDSAANVQAALEATLQIHGVTVAFTGG-TAVCDDDGVSTAITFTHNPGDLPQLRVAKNDLTT---------SGATTTIEIVHSGQTSAQG--VASVTGTKEDLPCNGRGVCDSSTGQCTCYTGFSSSDRAGASGLSGDCGFGTTTSCPGSXXXXXXXXXXXA--------------SDYTCTCMDGYVGADCNTRTCPTGKAWFAEAGVSLPGFVSVTNGATSVTTTDDLRTHVKRGDTVVINGETLTVSTSTGDTFDATTLPLASAYQGSTVTYVEAAARPEIAHHVGTQCSGRGHCDSLLGTCSCMNG-FTGSACQHTTCPSSCSGRGDCISNERFAEETLDNFDSTAYTYGADIGNQDTWDSDMLFGCKCDKKLQYDYGMY---------------DSFGHDCSKLSCPTGDDPSTSGVHESQVITCSATGGTFTLTFRREVTAAIDHNAAAADIKSALEALRTIGTVSVTY--DSGTEACSSGGVAMTITFLTELGDLPELVPDSSSLTGGSASAT--------VTSTTDGTRENDECSNHGLCDRATGACSCFAGYVSSDGSGNA-GDRGDCGARD 634          
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Match: W2NFM7_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2NFM7_PHYPR)

HSP 1 Score: 361 bits (926), Expect = 2.070e-109
Identity = 258/706 (36.54%), Postives = 348/706 (49.29%), Query Frame = 3
Query:  321 GGCSNDCSGHGSCSDLQVQICQCYVGWAGRDCSQRLCPAATAWADYATAADTAHAALTECAGMG----SGG---------------------TCSEHGRCTSMREAAEQVDYRNFFYEGTYDG-WDADMIFGCACDPGYTGYDCSQRSCPYGPDPIDMTTADDVQIVDCTCPATCSGSILLSFMGQITREIPHDA-TAELVEFRLEELSTTIDVSVSFDGGNTALCSAAGTAASVTFLRPSVPRLSGVHWNLTAVNSTLASSGSSASPLVEVYSAGASSAVNASVGSVWGTVVDYECNRRGRCDRTSGLCLCYEDFGSSDGTGGEGSVGDCGYVNSSSLPTDCSAVIPSWDLTATAAACSGAGTCSGSSDLLCECDSGYGGWACDLMTCPNSTAWFDEAV-DGVGHAAGTTCANGGTCEGSDGTCTCATGLFEGLACDLMQCVSNCSTLGLCH----TMAELAANS---------FDYQRQPQAWSYSLWDADMVTGCDCNRSLAVDNALSLNSTTFRGPYAFADTDSFGYDCSLARCPRGDDPLTAG-VNEVQRISCIGGFGTFTLAFRGAETVELQYDASADDVEAALGALSTLRNVAVTFEDDDVTTACAVPAASMLVEFITETGDLPILVAEFSNLFESSALSSLAAAGVMSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQSADDNGTAWGNRGDCG 2312
            G C + C+ HG+C       C C+ G+ G DC+ R CP    W D+AT  D+  +   EC+  G    S G                      C+ HG+C SMR  A   +  N  Y  TYD  WDAD I+GC CD GYTG DCS R CPYG DPI     D+VQ V C C   C+G+  LSF G+ TR +  +  TA  ++  LE+L T   VSVS +GG T LC + G +A +TF           H N+ A+    + SG ++S  VE     A+      + +V GT    EC+ RG C+   GLC C   FG SDG GG G++ DCGY + S L T C+ +  S         C   G C G+    C CD G+GG+ C    CP   AW +EA  + V H +   C+N G C  S GTC C TG FEG AC+ M C ++            T+ ELAA +         F Y   P A   S WDADM  GC C++ + +D   ++  +              GY C+   CP GDDP T   V+EVQ +SC    G+FTL+FRG  T+ + + ASA  V+ AL  L T+ +V+V+F    V  AC+    +M V F + +GDLP+L    + L  S+A  +       +V   T GT+EDV C   G CD   G C C + + S++  G  +G+  DCG
Sbjct:   25 GSCPSKCNRHGTCGSDNT--CTCFPGYTGYDCNSRACPKGAPWVDFATGQDSVRSVAQECSNRGFCNRSSGKCECDEGFAGPACERLQLCRINCNGHGKCLSMRAMAATKNDYNLIYSATYDTPWDADRIYGCVCDHGYTGADCSLRQCPYGDDPISTGQVDEVQSVSCLCNG-CTGTFTLSFRGETTRPLDGNVDTAATLKAALEDLITIRGVSVSLNGGTT-LCDSDGVSAMITFTYE--------HGNVPALVIGSSLSGGTSSLTVETDGTQAAYGPTPPL-TVRGTKEWLECSGRGTCNTLLGLCACATGFGPSDGLGGSGNILDCGYYSGSGLTT-CAGIFGS------VTRCYNHGRCQGAPLYQCLCDEGFGGYDCSQPQCPTGRAWVEEAATNNVAHNSIVQCSNAGLCN-SAGTCRCLTG-FEGAACNRMSCPTSXXXXXXXXXXXXTLRELAALTPTATFTAAGFVYGSDPNA--LSTWDADMAQGCYCDK-VPLDRGKNVRYS--------------GYSCAKTPCPSGDDPWTTNQVDEVQTVSCSADGGSFTLSFRGETTLPIAFSASASAVKFALERLLTITSVSVSFATGAV--ACSSAGNAMRVTFYSPSGDLPLLSISSATLTHSTATVAT------NVVPTTQGTKEDVICNNRGRCDEDTGTCVCSLFHTSSNALGK-FGSLNDCG 682          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1584.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSB1_ECTSI2.370e-19346.39EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
F0XX10_AURAN2.460e-15442.32EGF-like domain-containing protein n=1 Tax=Aureoco... [more]
A0A7S3JTR5_9STRA9.960e-15240.32Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2SRV2_9STRA9.850e-11736.94Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A5D6XF23_9STRA1.130e-11636.71Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6G0WQJ7_9STRA1.270e-11335.96Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S2WEC7_9STRA2.510e-11235.09Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6G0WQF1_9STRA8.630e-11136.01Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2R5GIT2_9STRA9.670e-11035.68Tenascin n=1 Tax=Hondaea fermentalgiana TaxID=2315... [more]
W2NFM7_PHYPR2.070e-10936.54Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1584contigP-wetherbeei_contig1584:1596..6324 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSB1
PFAMsEGF_2
Model size2637
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons9
Evalue3.84e-196
EggNOG OGsKOG1225@1|root,KOG1225@2759|Eukaryota
Ec32 ortholog descriptionEGF-like domain, extracellular
Ec32 orthologEc-12_004180.1
Descriptionregulation of canonical Wnt signaling pathway involved in osteoblast differentiation
Cds size2208
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1584.1.2prot_P-wetherbeei_contig1584.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1584 1858..6157 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186068.9708462-UTR-P-wetherbeei_contig1584:1595..18571683186068.9708462-UTR-P-wetherbeei_contig1584:1595..1857Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1584 1596..1857 -
1683186069.0779157-UTR-P-wetherbeei_contig1584:6157..63241683186069.0779157-UTR-P-wetherbeei_contig1584:6157..6324Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1584 6158..6324 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186068.979358-CDS-P-wetherbeei_contig1584:1857..22541683186068.979358-CDS-P-wetherbeei_contig1584:1857..2254Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1584 1858..2254 -
1683186068.9865956-CDS-P-wetherbeei_contig1584:2492..26631683186068.9865956-CDS-P-wetherbeei_contig1584:2492..2663Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1584 2493..2663 -
1683186068.9965146-CDS-P-wetherbeei_contig1584:2983..31741683186068.9965146-CDS-P-wetherbeei_contig1584:2983..3174Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1584 2984..3174 -
1683186069.0082688-CDS-P-wetherbeei_contig1584:3591..38271683186069.0082688-CDS-P-wetherbeei_contig1584:3591..3827Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1584 3592..3827 -
1683186069.0152764-CDS-P-wetherbeei_contig1584:4101..43431683186069.0152764-CDS-P-wetherbeei_contig1584:4101..4343Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1584 4102..4343 -
1683186069.023392-CDS-P-wetherbeei_contig1584:4588..48811683186069.023392-CDS-P-wetherbeei_contig1584:4588..4881Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1584 4589..4881 -
1683186069.0311024-CDS-P-wetherbeei_contig1584:5127..52901683186069.0311024-CDS-P-wetherbeei_contig1584:5127..5290Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1584 5128..5290 -
1683186069.0494714-CDS-P-wetherbeei_contig1584:5564..57331683186069.0494714-CDS-P-wetherbeei_contig1584:5564..5733Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1584 5565..5733 -
1683186069.0680451-CDS-P-wetherbeei_contig1584:5811..61571683186069.0680451-CDS-P-wetherbeei_contig1584:5811..6157Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1584 5812..6157 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1584.1.2

>prot_P-wetherbeei_contig1584.1.2 ID=prot_P-wetherbeei_contig1584.1.2|Name=mRNA_P-wetherbeei_contig1584.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=736bp
MPDPHKCWFRCKTNRKTWRRHRGLVDRLSAVGVLVPFFFSRRSDAIDVSF
GGGCSNDCSGHGSCSDLQVQICQCYVGWAGRDCSQRLCPAATAWADYATA
ADTAHAALTECAGMGSGGTCSEHGRCTSMREAAEQVDYRNFFYEGTYDGW
DADMIFGCACDPGYTGYDCSQRSCPYGPDPIDMTTADDVQIVDCTCPATC
SGSILLSFMGQITREIPHDATAELVEFRLEELSTTIDVSVSFDGGNTALC
SAAGTAASVTFLRPSVPRLSGVHWNLTAVNSTLASSGSSASPLVEVYSAG
ASSAVNASVGSVWGTVVDYECNRRGRCDRTSGLCLCYEDFGSSDGTGGEG
SVGDCGYVNSSSLPTDCSAVIPSWDLTATAAACSGAGTCSGSSDLLCECD
SGYGGWACDLMTCPNSTAWFDEAVDGVGHAAGTTCANGGTCEGSDGTCTC
ATGLFEGLACDLMQCVSNCSTLGLCHTMAELAANSFDYQRQPQAWSYSLW
DADMVTGCDCNRSLAVDNALSLNSTTFRGPYAFADTDSFGYDCSLARCPR
GDDPLTAGVNEVQRISCIGGFGTFTLAFRGAETVELQYDASADDVEAALG
ALSTLRNVAVTFEDDDVTTACAVPAASMLVEFITETGDLPILVAEFSNLF
ESSALSSLAAAGVMSVTEVTAGTREDVECAAHGVCDTSIGRCSCYVGYQS
ADDNGTAWGNRGDCGWRNDAQTELYRGAGRADPMS*
back to top

mRNA from alignment at P-wetherbeei_contig1584:1596..6324-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1584.1.2 ID=mRNA_P-wetherbeei_contig1584.1.2|Name=mRNA_P-wetherbeei_contig1584.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4729bp|location=Sequence derived from alignment at P-wetherbeei_contig1584:1596..6324- (Phaeothamnion wetherbeei SAG_119_79)
CTTTATTCTTTTCACGGCTTTCGCAGAACTATACCGACGGCACCAGCGCC AGTTTTGACCTCGTTACCACCGCCGCCGCCACCGCAGCCGTCGCCGCCGT CAGCACGACGAGACCCTCAAGAACGTTACATTCGCCCAAAAACGGTCGCG AAATCGCCAAAGCACCCATGCCGGATCCCCACAAATGCTGGTTCAGGTGT AAAACCAACAGGAAGACGTGGCGGCGCCACCGGGGCCTTGTTGACAGACT TTCTGCAGTCGGTGTCCTCGTTCCTTTCTTTTTCTCGAGAAGATCAGACG CCATCGACGTGAGCTTCGGCGGCGGATGCTCCAACGATTGCAGCGGACAT GGTAGCTGCAGCGACCTGCAGGTGCAAATCTGCCAATGCTACGTGGGCTG GGCGGGCCGCGACTGCTCCCAGAGACTGTGCCCGGCGGCGACCGCCTGGG CCGACTACGCCACGGCCGCAGACACCGCCCACGCCGCCCTCACGGAGTGC GCAGGCATGGGCAAGTGCGACAGAAAGACCGGCACCTGCAAGTGCCGCGA GGGGTTCAGCGGCGAGGCGTGCCAGCGGCTCAACTGCCCCGGCGGCGGCA CCTGCAGCGAGCACGGCCGCTGCACGAGCATGCGGGAGGCGGCGGAGCAG GTGGACTACCGCAACTTCTTCTACGAGGGAACCTACGACGGGTGGGACGC CGACATGATCTTCGGCTGCGCGTGCGACCCGGGCTACACTGGCTACGATT GCTCGCAGAGGTGCATGCGGGAAAGCGGCAAAGCGAGAGCGTTCGTTGGA CTTCACTCAAAAACGTTTTTCTTAATCCCGTTTTCTTAATCCCAACAGTT AGACTTGTAAGGCTTCATCATTATGCCAGGCAGCCGCCAGCGTGGCATTT TGGTGCTCATCACCTACTGGAGTCCAACTTCTCTCCGTTTCCCACCCCGT AGGTTCTCACTTCTTTTCCCACTCCATCATCGTGCCCCTTTTCCTTCTCT TTTCTTCTCCGTTTTCCCCCGTTCGTTCAACCAGGTCCTGCCCCTACGGC CCCGACCCGATCGACATGACCACGGCGGACGACGTGCAAATCGTCGATTG TACGTGCCCGGCGACCTGTTCGGGGTCGATCCTGCTGAGCTTCATGGGGC AGATCACACGGGAGATTCCGCATGACGCCACCGCCGAACTCGTCGAAGTC AGTGAAATGCGTGAAAACTTAGTTTCCTTTCAGTTGGTTCCGCCGAATCT GTTCTCGTCGTGCTGCGAATACCGTCTAAGTCTTCACTGTCGATGGTACC GGCCTTACGGGCTGGTTTGTCGATCTTTGCATCCCTTTGGCAATGACCTC CAGCAGTATCTCCTGGCGGTAATTGGGCAACTGATCCTCTCTTGCACTAG CACTTTTCGACACACTCCGAAATCCGCCGCTGAACAACATCAGTTCCGAC TGGAGGAGCTGTCAACAACGATCGACGTCAGCGTGTCCTTCGACGGCGGC AACACCGCGCTCTGCTCCGCCGCCGGCACCGCCGCGTCCGTCACCTTCCT GCGGCCGTCCGTCCCACGCCTGTCGGGCGTCCACTGGAACCTGACGGCCG TGAACTCGACGCTGGCGTCGTCCGGTTCGAGCGCGTCGCCGCTGGTGGAG GTCTACTCGGCCGGCGCGAGCAGTGCAGTGAACGCGTCAGTCGGCAGCGT ATGGGGCACTGTGGTGGACTATGAGTGCAACAGAAGGTGAGGAGAGAACA GACGTTGCTTGTGCGGTTTCTGGCGAGCGGTTCGGGTGGCTTCGGCGATC ACAGCAGTTTGTTTGAAGCCTTCAAGGCTCGGCAGCGGGTATGGCATCTT GGTTTCGCCCAGTGTAGCTTCCTATGACCACCGGTCCCTAGGTCTACCAC GTTTACCTTTTTAATAGCAAGCCGCCTTTTCTGTGCATTGCCCGCCCGGC ATTTCCTCACCCCAACCTGCGTCCATCGCAGGGGCCGCTGCGACCGCACC TCGGGGCTGTGCCTCTGCTATGAAGACTTCGGCAGCAGCGACGGCACCGG CGGCGAGGGCTCCGTCGGCGACTGCGGCTATGTCAATTCCTCGAGCCTGC CGACAGACTGCAGCGCCGTCATCCCGTCCTGGGACCTGACGGCAACGGCG GCGGCGTGCAGCGGCGCCGGCACGTGCAGCGGGAGCAGCGACCTGCTCTG CGAGTGCGACAGCGGCTACGGGGGTGCGTTTGCTTTGTTCCTTTTGGCTG CGTTGTGCCTTGGGCTAGCTGTTTCCGATAAAAGACAGACTTGCCTTCTT TTACGTGAGGGTCTGGCCCTGCCCTTCTCCGATGACGCCGAGCTCCGCAT GATCGATCATCTTGTTTTTAAATCTGGTATGCTGCTCCGGCGAACGGCAG CGTCTTGTACTATCACCCCCTTTTCCTCCTGATTTCTTTACCGTCGGGTT GTCGTTCTACCGGTTGTCTTGTCGCTCTGACCGTTGCTGCCCCACAGGCT GGGCGTGCGACCTGATGACGTGCCCCAACTCAACGGCGTGGTTCGACGAG GCCGTCGACGGCGTCGGACACGCCGCGGGCACAACCTGCGCCAACGGCGG AACCTGCGAGGGCTCCGACGGCACATGCACGTGCGCCACAGGGCTCTTCG AAGGGTTGGCCTGCGATTTGATGCAGTGCGTGTCCAACTGCAGCACGCTT GGCCTCTGCCACACCATGGCCGAGCTCGCTGCGGTGAGTATGGACCGGTG GGGCGGGATCGTTTTCTTTGTTAACTGATAGGTCATTCACTGGGAGTGAC TAGAGGCGATGGAGGGCGGCTGGGAAGGGCTGTAGTGGCAATGGCGCTGC CGGCCGAAAGCGGTAGCTACTGCGGTGGTGGTGGCAGCGGCGCTGGCTAA ATAGTAGCGACGGCGGCAGCTGTTGCTCCTGTGGTTTGTCTCGTTCTGAT AATTTGGCAATGGCGACTGTGGGACAGCTACACATTACGTGCTCGAGATT TGACTCGCGCGAATCTTACTGAATCTTGTCCTTTGTCGCTCTCTGTCTGC GCTCCAACGTCGCCGCCGCCGTCGCCGCCGCCGTTGCTGCTGCCGCCACC ATGGCCACCGTAATCCGCAATCCTCCCTCCTTCACCACCCAACCCCATAG AACTCGTTCGACTACCAGCGCCAGCCGCAGGCGTGGTCATACTCGCTGTG GGACGCCGACATGGTAACGGGCTGTGACTGCAACCGGTCGTTGGCAGTCG ACAACGCCTTGTCGCTCAACTCGACAACGTTCCGGGGCCCGTACGCCTTC GCGGACACGGACTCGTTTGGTTACGATTGCTCGCTCGCGAGGTGAGAATA GAATGGTAAGAGGGTAAGTAGGATGGGAAGGGAGGATGGAGAGGGAAGGT CTGATGACATCGGTTGCCTTGTCGATAACGGCGGCGGCGCCGGCGGCGAG GTGGTTTTGTCGATAACGGCGGTAGCTGCGGCCAGGCGGCACTAGCAAGA CGGCGGCGGCAGCGCTGGCACTGATGGCAGCGTTGACGTTGGCGACAGCA ACAAGGTCTCGGGTTTATCTAATGTGGATACTGCTTCAGCTCAAGCGCCT CCATCGCTCCCTCTCTCGGCTTCAATCCCTTTTCCGCCCGGACGCCGCAA CGCCATGGCAGGTGTCCCCGCGGCGATGACCCGTTGACGGCGGGCGTCAA TGAGGTGCAACGCATCAGCTGCATCGGCGGCTTCGGCACCTTCACGCTGG CCTTCCGCGGCGCTGAGACGGTCGAGCTCCAATACGACGCCTCCGCCGAT GACGTCGAAGCCGCGCTGGGGGCGCTCTCCACGTGAATTGCATTTTCTTC TGGGCGAGGAAGGAGAGGGCACACGGCGGGTTTCTGCAGACGCTGGCCTG GCCTTTATCGTTTTTCTCTTTGGACGTTTCTTTCTCAGCCGCTTACGCAA GGCTCATGCACACGCTTCCAACTTTTGCGTGCGTGAAGGTCCAGCAGCGT GCCGTCAAGACCCAGGATCCGTTTCTCTGCCGCCTTCTTGCGATCTGCGC ACCGTTCTTTCCTATCGCAGGCTGCGCAACGTGGCCGTGACGTTTGAAGA CGATGATGTCACCACCGCGTGCGCCGTCCCCGCCGCCTCCATGCTCGTCG AATTCATCACCGAAACTGGTGACCTGCCGATTCTCGTGGCGGAATTCTCC AACCTCTTTGAGTCGTCCGCTTTGTCGTCGTTGGCGGCGGCGGGTGTCAT GAGCGTCACGGAAGTAACCGCCGGGACGCGGGAGGACGTGGAGTGCGCGG CGCATGGCGTCTGCGACACCTCTATCGGCCGCTGCAGCTGTTACGTCGGT TACCAGTCGGCGGACGACAACGGGACGGCATGGGGCAATCGCGGCGACTG CGGTTGGCGGAACGACGCTCAGACGGAGCTGTACCGCGGCGCCGGTCGGG CGGACCCGATGTCGTGAGCCGGTGCGGCTGCTTAGAGTAGGATATGTAGG CCGCTGCAGGAAGGGAGGGAAGTGGAATCACAACGCGAGATATGTTGGGG ATTGCGGGTACGGAGCCGGTGCGACATGTTCTTAGACTTACTGTGTCAGA GCGGCTTCTGCTTCAGGTTTTCTTGAGACGATGGGACACGCATCATAAGG TCACGGGGCTGTACAAACATCAACGATCACAATCTACGGACATCGTGCAA CGAGGGAAAACGCTGGAAGTTTGCACGGC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1584:1596..6324-

>mRNA_P-wetherbeei_contig1584.1.2 ID=mRNA_P-wetherbeei_contig1584.1.2|Name=mRNA_P-wetherbeei_contig1584.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2208bp|location=Sequence derived from alignment at P-wetherbeei_contig1584:1596..6324- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGATCCCCACAAATGCTGGTTCAGGTGTAAAACCAACAGGAAGAC
GTGGCGGCGCCACCGGGGCCTTGTTGACAGACTTTCTGCAGTCGGTGTCC
TCGTTCCTTTCTTTTTCTCGAGAAGATCAGACGCCATCGACGTGAGCTTC
GGCGGCGGATGCTCCAACGATTGCAGCGGACATGGTAGCTGCAGCGACCT
GCAGGTGCAAATCTGCCAATGCTACGTGGGCTGGGCGGGCCGCGACTGCT
CCCAGAGACTGTGCCCGGCGGCGACCGCCTGGGCCGACTACGCCACGGCC
GCAGACACCGCCCACGCCGCCCTCACGGAGTGCGCAGGCATGGGCAGCGG
CGGCACCTGCAGCGAGCACGGCCGCTGCACGAGCATGCGGGAGGCGGCGG
AGCAGGTGGACTACCGCAACTTCTTCTACGAGGGAACCTACGACGGGTGG
GACGCCGACATGATCTTCGGCTGCGCGTGCGACCCGGGCTACACTGGCTA
CGATTGCTCGCAGAGGTCCTGCCCCTACGGCCCCGACCCGATCGACATGA
CCACGGCGGACGACGTGCAAATCGTCGATTGTACGTGCCCGGCGACCTGT
TCGGGGTCGATCCTGCTGAGCTTCATGGGGCAGATCACACGGGAGATTCC
GCATGACGCCACCGCCGAACTCGTCGAATTCCGACTGGAGGAGCTGTCAA
CAACGATCGACGTCAGCGTGTCCTTCGACGGCGGCAACACCGCGCTCTGC
TCCGCCGCCGGCACCGCCGCGTCCGTCACCTTCCTGCGGCCGTCCGTCCC
ACGCCTGTCGGGCGTCCACTGGAACCTGACGGCCGTGAACTCGACGCTGG
CGTCGTCCGGTTCGAGCGCGTCGCCGCTGGTGGAGGTCTACTCGGCCGGC
GCGAGCAGTGCAGTGAACGCGTCAGTCGGCAGCGTATGGGGCACTGTGGT
GGACTATGAGTGCAACAGAAGGGGCCGCTGCGACCGCACCTCGGGGCTGT
GCCTCTGCTATGAAGACTTCGGCAGCAGCGACGGCACCGGCGGCGAGGGC
TCCGTCGGCGACTGCGGCTATGTCAATTCCTCGAGCCTGCCGACAGACTG
CAGCGCCGTCATCCCGTCCTGGGACCTGACGGCAACGGCGGCGGCGTGCA
GCGGCGCCGGCACGTGCAGCGGGAGCAGCGACCTGCTCTGCGAGTGCGAC
AGCGGCTACGGGGGCTGGGCGTGCGACCTGATGACGTGCCCCAACTCAAC
GGCGTGGTTCGACGAGGCCGTCGACGGCGTCGGACACGCCGCGGGCACAA
CCTGCGCCAACGGCGGAACCTGCGAGGGCTCCGACGGCACATGCACGTGC
GCCACAGGGCTCTTCGAAGGGTTGGCCTGCGATTTGATGCAGTGCGTGTC
CAACTGCAGCACGCTTGGCCTCTGCCACACCATGGCCGAGCTCGCTGCGA
ACTCGTTCGACTACCAGCGCCAGCCGCAGGCGTGGTCATACTCGCTGTGG
GACGCCGACATGGTAACGGGCTGTGACTGCAACCGGTCGTTGGCAGTCGA
CAACGCCTTGTCGCTCAACTCGACAACGTTCCGGGGCCCGTACGCCTTCG
CGGACACGGACTCGTTTGGTTACGATTGCTCGCTCGCGAGGTGTCCCCGC
GGCGATGACCCGTTGACGGCGGGCGTCAATGAGGTGCAACGCATCAGCTG
CATCGGCGGCTTCGGCACCTTCACGCTGGCCTTCCGCGGCGCTGAGACGG
TCGAGCTCCAATACGACGCCTCCGCCGATGACGTCGAAGCCGCGCTGGGG
GCGCTCTCCACGCTGCGCAACGTGGCCGTGACGTTTGAAGACGATGATGT
CACCACCGCGTGCGCCGTCCCCGCCGCCTCCATGCTCGTCGAATTCATCA
CCGAAACTGGTGACCTGCCGATTCTCGTGGCGGAATTCTCCAACCTCTTT
GAGTCGTCCGCTTTGTCGTCGTTGGCGGCGGCGGGTGTCATGAGCGTCAC
GGAAGTAACCGCCGGGACGCGGGAGGACGTGGAGTGCGCGGCGCATGGCG
TCTGCGACACCTCTATCGGCCGCTGCAGCTGTTACGTCGGTTACCAGTCG
GCGGACGACAACGGGACGGCATGGGGCAATCGCGGCGACTGCGGTTGGCG
GAACGACGCTCAGACGGAGCTGTACCGCGGCGCCGGTCGGGCGGACCCGA
TGTCGTGA
back to top