mRNA_P-wetherbeei_contig15771.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A127ERF6_9HYPH (Extensin n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ERF6_9HYPH) HSP 1 Score: 328 bits (841), Expect = 2.080e-106 Identity = 194/351 (55.27%), Postives = 231/351 (65.81%), Query Frame = 1
Query: 25 TPPGLETQISPPETFAPQRPPSYGTPPAYPQASPDYSHGPQPNMGVRNLAAPPDDRFTRDDRFTPAPQ-------RVPDRA-PGRFDPPSQQS-----LPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSESFDPRNDPFAYR--RGDPTPTGSIAGKRKAVKPPEPDXXXXDWIEDDGPRMSVD 1032
+PPG I P + G PP+ +A D+ QP + PP + ++ AP +PD A PG PP+ +S LP LGP RPQ++ + PVE+KP ATLACPIVSALD WIA SVQPAA WF QPV EIKQISAYSCRGMNGQ GA+ISEHAFGNALD+AAFV ADGRR+TVK+GW+GSPEEQGFLRDVQGAAC+ FTTVLAPGSN FHYDHIHVDLMRR+SGRR+CQP AVDG+ +AARAR N + ASRR ++ PPTRR D +DPFA+R R DP TGS+A + P P DW+E+ GPR ++D
Sbjct: 119 SPPGAPMSIEAPGSAQQGGYQQLGAPPSNLRAPSDWQRV-QPGYQQQPSYNPPPQQTYSQPQYRQAPPXXXXXXXELPDYAQPGA--PPTVRSQPSRPLPPLGPPRPQQVAASQPVEVKPAATLACPIVSALDHWIANSVQPAANKWFRQPVAEIKQISAYSCRGMNGQPGAKISEHAFGNALDVAAFVLADGRRITVKDGWKGSPEEQGFLRDVQGAACDQFTTVLAPGSNAFHYDHIHVDLMRRASGRRICQPGAVDGDVVAARARQNP-VYASRR--VYEA-----PPTRRYDPPTDQASDPFAWRGDRRDPGVTGSVA---RHPAPNNPAADDNDWVEEPGPRPAID 455
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A833GCB0_9HYPH (Extensin n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GCB0_9HYPH) HSP 1 Score: 277 bits (708), Expect = 1.460e-86 Identity = 155/274 (56.57%), Postives = 175/274 (63.87%), Query Frame = 1
Query: 265 PSQQSLPALGPARPQR--IGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSESFDPRNDPFAYRRGDPTPTGSIAGKRKAVKPPE----------------PDXXXXDWIEDDGPRMSVD 1032
P PA P P+ G PVE+KPTATLACPIVSALD+WI S+QP+A W QPV EI+QISAYSCRGMNGQ GARISEHAFGNALDIA+FV ADGR++TVK+GW+G+PEEQGFLRDVQGAACE FTTVLAPGSNRFHYDHIHVDLMRR+SGR +C P AV GE +AAR VA R +A RRGDP TGS+A + KPP+ PD DW+E DGPR D
Sbjct: 217 PRSSERPASPPRAPRTPFTGSIGPVEIKPTATLACPIVSALDRWIVDSIQPSAMRWLGQPVAEIRQISAYSCRGMNGQRGARISEHAFGNALDIASFVLADGRKITVKDGWRGTPEEQGFLRDVQGAACEQFTTVLAPGSNRFHYDHIHVDLMRRASGRSICNPDAVPGEVVAAR-------VAKERG--------------------------YA-RRGDPAYTGSVA----SAKPPKDKLKTKTTPKLKNLFRPDDDDDDWVEHDGPRERDD 452
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A4Q6ARP4_9SPHI (Extensin family protein (Fragment) n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q6ARP4_9SPHI) HSP 1 Score: 268 bits (684), Expect = 5.940e-86 Identity = 132/197 (67.01%), Postives = 152/197 (77.16%), Query Frame = 1
Query: 250 GRFDPPSQQSLP-ALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAG 837
GR P Q P +GP++ + + G PV +KPTATLACP+VSALD+WI S+QPAA WF QP+ EI+QISAYSCRGMNGQ GARISEHAFGNALDIA F ADGR+V+VK+GW+G PEEQGFLRDVQGAAC+ F+TVLAPGSN +HYDHIHVDLMRRS GR +CQP AV GE IA+RA G REP G
Sbjct: 8 GRLSPVDQYQQPHRMGPSQGEGVAGIGPVTIKPTATLACPVVSALDRWITDSIQPAAMRWFGQPIAEIRQISAYSCRGMNGQRGARISEHAFGNALDIAGFTLADGRKVSVKDGWRGLPEEQGFLRDVQGAACQQFSTVLAPGSNVYHYDHIHVDLMRRSKGRVICQPAAVSGEAIASRASGGRYAG---REPAITG 201
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A1W6ZKP4_9HYPH (Extensin-like_C domain-containing protein n=2 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZKP4_9HYPH) HSP 1 Score: 275 bits (702), Expect = 2.480e-85 Identity = 155/261 (59.39%), Postives = 177/261 (67.82%), Query Frame = 1
Query: 265 PSQQSLPALGPARPQRIGGAT----PVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPP-----TRRSSESFDPRNDPFAYRRGDPTPTGSIAGKRKAVKPPEPDXXXXDWIEDDGPR 1020
PSQ S P P +GGA PVE+KP ATLACPIVSALD+WI SVQPAA+ WF QPV EI+QISAYSCRGMNGQ GARISEHAFGNALDIA+FV ADGRR+TVKNGW+GSPEEQGFLRDVQGAAC+ F TVLAPGSNRFHYDHIHVDLMRR+SG ++C P + G+ +AAR VA R +A RPDP TRR+S + P+ K + + + D DWIEDDGPR
Sbjct: 250 PSQASAPMSVP-----LGGAVAAVGPVEIKPAATLACPIVSALDRWILDSVQPAAQRWFRQPVTEIRQISAYSCRGMNGQRGARISEHAFGNALDIASFVLADGRRITVKNGWKGSPEEQGFLRDVQGAACDQFNTVLAPGSNRFHYDHIHVDLMRRASGHKICNPDQIPGDVVAAR-------VAKERG--YAWRPDPGVTGSVGKTRRASLNGGPKK----------------KSKVRNILSADDD----DWIEDDGPR 476
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: W3RNX3_9BRAD (Extensin n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RNX3_9BRAD) HSP 1 Score: 272 bits (695), Expect = 3.550e-85 Identity = 146/249 (58.63%), Postives = 165/249 (66.27%), Query Frame = 1
Query: 265 PSQQSLPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSESFDPRNDPFAYRRGDPTPTGSIAGKRKAVKPPEPDXXXXDWIEDD 1011
PS++ LP LGP+R + PV +KP ATLACP+VSALD+WI +VQPAA WFNQPV EIKQISAYSCRGMNG ARISEHAFGNALDIAAF ADGRR++VK+GW+G PEEQGFLRDVQG AC FTTVLAPGSN +HYDHIHVDLMRRSSGR +CQP AV GE IAARA G +AGR DP TGSI KR+ + DW+ED+
Sbjct: 189 PSERPLPRLGPSRGDQTASIGPVGVKPAATLACPLVSALDRWINETVQPAAIRWFNQPVSEIKQISAYSCRGMNGNPNARISEHAFGNALDIAAFTLADGRRISVKDGWRGLPEEQGFLRDVQGGACRMFTTVLAPGSNVYHYDHIHVDLMRRSSGRVICQPAAVSGEMIAARASGG----------RYAGR--------------------------DPGVTGSIGSKRRVLS--NRATNDDDWVEDE 399
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A6L5FMF6_9HYPH (Extensin n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FMF6_9HYPH) HSP 1 Score: 272 bits (695), Expect = 4.240e-85 Identity = 168/346 (48.55%), Postives = 191/346 (55.20%), Query Frame = 1
Query: 49 ISPPETFAPQRPPSYGT---------PPAYPQASPDYSHGPQPNMGVRNLAAPPDDRFTRDDRFTPAPQRVPDRAPGRFDPPSQQSLPA--------LGPARPQRIGGAT-PVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSESFDPRNDPFAYRRGDPTPTGSIAGKRKAVKPPEPDXXXXDWIEDDGPRMSVD 1032
I+ P + P R P+ G PP PQ D + +P + P + R P P+R + + FD P + P LGPA QRI G+ PV LKP ATLACPIVSALDQWI +VQPAA WF QPVV I+QISAYSCRGMNG ARISEHAFGNALDIAAF ADGR +T+K GW+GSPEE GFL DVQGAAC++F+TVLAPGSNRFHYDHIHVDLMRR GR VC P A+ GE AARA RRGDPT TGSI PD DW+E DGPR S +
Sbjct: 108 IAQPPQWQPSRLPAAGPEIAAPLLIHPPGVPQPDEDVAAD-EPEIDPAPAITPARPFYRRPVEAAPLPRRAGEPS---FDQPPPATFPTTLHRPSVLLGPAPGQRITGSIGPVTLKPAATLACPIVSALDQWITTAVQPAAMRWFGQPVVGIRQISAYSCRGMNGNPRARISEHAFGNALDIAAFTLADGRTITIKRGWRGSPEEVGFLHDVQGAACQSFSTVLAPGSNRFHYDHIHVDLMRRGGGRVVCNPSAIPGEVAAARAAQRKGYA----------------------------------RRGDPTVTGSITAYAGRSDEGGPDND--DWVEHDGPRESAE 413
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A1Q4DJH7_9HYPH (Extensin-like_C domain-containing protein n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DJH7_9HYPH) HSP 1 Score: 273 bits (697), Expect = 5.830e-85 Identity = 148/245 (60.41%), Postives = 167/245 (68.16%), Query Frame = 1
Query: 85 PSYGTPPAYPQASPDYSHGPQPNMGVRNLAAPP------DDRFTRDDRFTPAPQRVPDRAPGRFDPPSQQS-----LPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARA 786
P YG+ P P A P Y+ P AAPP DD DD P P P + PP+ S +P LGP + G ATPV + P ATLACPIVSALDQW++ +VQPAA WF QPVVEIKQISAYSCRGMNGQ GARISEHAFGNALDIAAFV ADGR++TVK W G+P+EQ FL DVQG ACETFTTVLAPGSN++HYDHIHVDLMRR+S R +CQP A+DG ARA
Sbjct: 153 PEYGSVPP-PSARPGYAPANAPFGAQPVRAAPPPELESEDDDDVPDDAIRPGQGSAPATRPA-YTPPAAASPRVPQIPQLGPPKGLYTGSATPVAVTPAATLACPIVSALDQWVSNTVQPAAHRWFGQPVVEIKQISAYSCRGMNGQPGARISEHAFGNALDIAAFVLADGRKITVKKNWNGAPDEQAFLHDVQGGACETFTTVLAPGSNKYHYDHIHVDLMRRASRRLICQPAAIDGRVAYARA 395
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: UPI0005769A0C (extensin family protein n=1 Tax=Bradyrhizobium japonicum TaxID=375 RepID=UPI0005769A0C) HSP 1 Score: 265 bits (676), Expect = 7.390e-84 Identity = 135/204 (66.18%), Postives = 154/204 (75.49%), Query Frame = 1
Query: 265 PSQQSLPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSE 876
P+QQ LP LGPA+ + PV +KPTATLACPIVS LD+W+A +VQP+A WF VVEIKQISAYSCRGMNG + A ISEHAFGNALDIAAFV ADGRRVTVK+GW+G PEEQGFLRDVQ AC FTTVLAPGSN +HYDHIHVDLMRR+S R +CQP AV G+++A RA+ N A RR+P G R T R E
Sbjct: 83 PTQQPLPRLGPAQGNPVVAVGPVAIKPTATLACPIVSELDRWLADTVQPSAMRWFGARVVEIKQISAYSCRGMNGNSHAHISEHAFGNALDIAAFVLADGRRVTVKDGWRGMPEEQGFLRDVQSGACAHFTTVLAPGSNVYHYDHIHVDLMRRASRRLICQPAAVSGDEVAGRAQ-QRNPYAGRRDPYVTGSLGTRKSTTRKQE 285
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A1H0CXU2_9BRAD (Uncharacterized conserved protein n=5 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1H0CXU2_9BRAD) HSP 1 Score: 268 bits (686), Expect = 7.530e-84 Identity = 158/271 (58.30%), Postives = 181/271 (66.79%), Query Frame = 1
Query: 13 PLSLTPPGL---ETQISPPETFAPQRPPSYGTPPAYPQASPDYSHGPQPNMGVRNLAAPPDDRFTRDDRFTPAPQRVPDRAPGRFDPPSQQSLPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASR 816
P+SL+ PG+ E +I P AP + P Y PAY PP DR++ AP + P P P S + P LGPA+ + PV +KPTATLACPIVSALD+W+A SVQPAA+ WF VVEIKQISAYSCRGMNG A A ISEHAFGNALDIAAFV ADGRR+TVK+GW+G PEEQGFLRDVQGAAC+ F TVLAPGSN +HYDHIHVDLMRR+S R +CQP AV GE+IAARA G N ASR
Sbjct: 136 PISLSAPGVAPQEDEIDLPAEAAPGQAP-YRNAPAY----------------------PPRDRYS-------APSQAPYSEPYSQGPAS--APPRLGPAQGNAVNTVGPVAIKPTATLACPIVSALDRWLADSVQPAAQRWFGARVVEIKQISAYSCRGMNGNAHAHISEHAFGNALDIAAFVLADGRRITVKDGWKGMPEEQGFLRDVQGAACQQFNTVLAPGSNVYHYDHIHVDLMRRASRRIICQPAAVPGEEIAARA-GGRNPYASR 373
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A4YZM2_BRASO (Extensin-like_C domain-containing protein n=1 Tax=Bradyrhizobium sp. (strain ORS 278) TaxID=114615 RepID=A4YZM2_BRASO) HSP 1 Score: 267 bits (682), Expect = 2.240e-83 Identity = 151/263 (57.41%), Postives = 172/263 (65.40%), Query Frame = 1
Query: 82 PPSYGTPPAYPQASPDYSHGPQPNMGVRNLAAPPDDRFTRDDRFTPAPQRVPDRAPGRFDPPSQQSLPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGN-----------SNLVASRREPMFAG 837
PPS GTPP P +P G ++ PPD PA P AP P Q P LGP+R +G PV +KPTATLACPIVSALD W+A SVQPAA+ WF Q VVEIKQISAYSCRGMNG A ISEHAFGNALDIAAF ADGRR+TVK+GW G PEEQGFLRDVQG AC+ FTTVLAPGSN +HYDHIHVDLMRR+S R +CQP A GE +AARA+ ++ +ASR++P G
Sbjct: 139 PPSLGTPPGAPLQL-------EPPAGEDDVNLPPD-------ASDPASPYRPQAAPRTAYP---QDPPRLGPSR-DPVGATGPVAVKPTATLACPIVSALDHWLAESVQPAAQRWFGQRVVEIKQISAYSCRGMNGNPSAHISEHAFGNALDIAAFTLADGRRITVKDGWIGLPEEQGFLRDVQGGACQQFTTVLAPGSNSYHYDHIHVDLMRRASRRLICQPAAQSGEAVAARAQQRRYGYGQREPDVTSSIASRKQPKSIG 383 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15771.1.1 >prot_P-wetherbeei_contig15771.1.1 ID=prot_P-wetherbeei_contig15771.1.1|Name=mRNA_P-wetherbeei_contig15771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=345bp LAGPPLSLTPPGLETQISPPETFAPQRPPSYGTPPAYPQASPDYSHGPQPback to top mRNA from alignment at P-wetherbeei_contig15771:49..1083+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15771.1.1 ID=mRNA_P-wetherbeei_contig15771.1.1|Name=mRNA_P-wetherbeei_contig15771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1035bp|location=Sequence derived from alignment at P-wetherbeei_contig15771:49..1083+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15771:49..1083+ >mRNA_P-wetherbeei_contig15771.1.1 ID=mRNA_P-wetherbeei_contig15771.1.1|Name=mRNA_P-wetherbeei_contig15771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1035bp|location=Sequence derived from alignment at P-wetherbeei_contig15771:49..1083+ (Phaeothamnion wetherbeei SAG_119_79)back to top |