mRNA_P-wetherbeei_contig15771.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15771.1.1
Unique NamemRNA_P-wetherbeei_contig15771.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A127ERF6_9HYPH (Extensin n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ERF6_9HYPH)

HSP 1 Score: 328 bits (841), Expect = 2.080e-106
Identity = 194/351 (55.27%), Postives = 231/351 (65.81%), Query Frame = 1
Query:   25 TPPGLETQISPPETFAPQRPPSYGTPPAYPQASPDYSHGPQPNMGVRNLAAPPDDRFTRDDRFTPAPQ-------RVPDRA-PGRFDPPSQQS-----LPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSESFDPRNDPFAYR--RGDPTPTGSIAGKRKAVKPPEPDXXXXDWIEDDGPRMSVD 1032
            +PPG    I  P +         G PP+  +A  D+    QP    +    PP  +     ++  AP         +PD A PG   PP+ +S     LP LGP RPQ++  + PVE+KP ATLACPIVSALD WIA SVQPAA  WF QPV EIKQISAYSCRGMNGQ GA+ISEHAFGNALD+AAFV ADGRR+TVK+GW+GSPEEQGFLRDVQGAAC+ FTTVLAPGSN FHYDHIHVDLMRR+SGRR+CQP AVDG+ +AARAR N  + ASRR  ++       PPTRR     D  +DPFA+R  R DP  TGS+A   +   P  P     DW+E+ GPR ++D
Sbjct:  119 SPPGAPMSIEAPGSAQQGGYQQLGAPPSNLRAPSDWQRV-QPGYQQQPSYNPPPQQTYSQPQYRQAPPXXXXXXXELPDYAQPGA--PPTVRSQPSRPLPPLGPPRPQQVAASQPVEVKPAATLACPIVSALDHWIANSVQPAANKWFRQPVAEIKQISAYSCRGMNGQPGAKISEHAFGNALDVAAFVLADGRRITVKDGWKGSPEEQGFLRDVQGAACDQFTTVLAPGSNAFHYDHIHVDLMRRASGRRICQPGAVDGDVVAARARQNP-VYASRR--VYEA-----PPTRRYDPPTDQASDPFAWRGDRRDPGVTGSVA---RHPAPNNPAADDNDWVEEPGPRPAID 455          
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A833GCB0_9HYPH (Extensin n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GCB0_9HYPH)

HSP 1 Score: 277 bits (708), Expect = 1.460e-86
Identity = 155/274 (56.57%), Postives = 175/274 (63.87%), Query Frame = 1
Query:  265 PSQQSLPALGPARPQR--IGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSESFDPRNDPFAYRRGDPTPTGSIAGKRKAVKPPE----------------PDXXXXDWIEDDGPRMSVD 1032
            P     PA  P  P+    G   PVE+KPTATLACPIVSALD+WI  S+QP+A  W  QPV EI+QISAYSCRGMNGQ GARISEHAFGNALDIA+FV ADGR++TVK+GW+G+PEEQGFLRDVQGAACE FTTVLAPGSNRFHYDHIHVDLMRR+SGR +C P AV GE +AAR       VA  R                           +A RRGDP  TGS+A    + KPP+                PD    DW+E DGPR   D
Sbjct:  217 PRSSERPASPPRAPRTPFTGSIGPVEIKPTATLACPIVSALDRWIVDSIQPSAMRWLGQPVAEIRQISAYSCRGMNGQRGARISEHAFGNALDIASFVLADGRKITVKDGWRGTPEEQGFLRDVQGAACEQFTTVLAPGSNRFHYDHIHVDLMRRASGRSICNPDAVPGEVVAAR-------VAKERG--------------------------YA-RRGDPAYTGSVA----SAKPPKDKLKTKTTPKLKNLFRPDDDDDDWVEHDGPRERDD 452          
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A4Q6ARP4_9SPHI (Extensin family protein (Fragment) n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q6ARP4_9SPHI)

HSP 1 Score: 268 bits (684), Expect = 5.940e-86
Identity = 132/197 (67.01%), Postives = 152/197 (77.16%), Query Frame = 1
Query:  250 GRFDPPSQQSLP-ALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAG 837
            GR  P  Q   P  +GP++ + + G  PV +KPTATLACP+VSALD+WI  S+QPAA  WF QP+ EI+QISAYSCRGMNGQ GARISEHAFGNALDIA F  ADGR+V+VK+GW+G PEEQGFLRDVQGAAC+ F+TVLAPGSN +HYDHIHVDLMRRS GR +CQP AV GE IA+RA G        REP   G
Sbjct:    8 GRLSPVDQYQQPHRMGPSQGEGVAGIGPVTIKPTATLACPVVSALDRWITDSIQPAAMRWFGQPIAEIRQISAYSCRGMNGQRGARISEHAFGNALDIAGFTLADGRKVSVKDGWRGLPEEQGFLRDVQGAACQQFSTVLAPGSNVYHYDHIHVDLMRRSKGRVICQPAAVSGEAIASRASGGRYAG---REPAITG 201          
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A1W6ZKP4_9HYPH (Extensin-like_C domain-containing protein n=2 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZKP4_9HYPH)

HSP 1 Score: 275 bits (702), Expect = 2.480e-85
Identity = 155/261 (59.39%), Postives = 177/261 (67.82%), Query Frame = 1
Query:  265 PSQQSLPALGPARPQRIGGAT----PVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPP-----TRRSSESFDPRNDPFAYRRGDPTPTGSIAGKRKAVKPPEPDXXXXDWIEDDGPR 1020
            PSQ S P   P     +GGA     PVE+KP ATLACPIVSALD+WI  SVQPAA+ WF QPV EI+QISAYSCRGMNGQ GARISEHAFGNALDIA+FV ADGRR+TVKNGW+GSPEEQGFLRDVQGAAC+ F TVLAPGSNRFHYDHIHVDLMRR+SG ++C P  + G+ +AAR       VA  R   +A RPDP        TRR+S +  P+                   K + +   + D    DWIEDDGPR
Sbjct:  250 PSQASAPMSVP-----LGGAVAAVGPVEIKPAATLACPIVSALDRWILDSVQPAAQRWFRQPVTEIRQISAYSCRGMNGQRGARISEHAFGNALDIASFVLADGRRITVKNGWKGSPEEQGFLRDVQGAACDQFNTVLAPGSNRFHYDHIHVDLMRRASGHKICNPDQIPGDVVAAR-------VAKERG--YAWRPDPGVTGSVGKTRRASLNGGPKK----------------KSKVRNILSADDD----DWIEDDGPR 476          
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: W3RNX3_9BRAD (Extensin n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RNX3_9BRAD)

HSP 1 Score: 272 bits (695), Expect = 3.550e-85
Identity = 146/249 (58.63%), Postives = 165/249 (66.27%), Query Frame = 1
Query:  265 PSQQSLPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSESFDPRNDPFAYRRGDPTPTGSIAGKRKAVKPPEPDXXXXDWIEDD 1011
            PS++ LP LGP+R  +     PV +KP ATLACP+VSALD+WI  +VQPAA  WFNQPV EIKQISAYSCRGMNG   ARISEHAFGNALDIAAF  ADGRR++VK+GW+G PEEQGFLRDVQG AC  FTTVLAPGSN +HYDHIHVDLMRRSSGR +CQP AV GE IAARA G            +AGR                          DP  TGSI  KR+ +          DW+ED+
Sbjct:  189 PSERPLPRLGPSRGDQTASIGPVGVKPAATLACPLVSALDRWINETVQPAAIRWFNQPVSEIKQISAYSCRGMNGNPNARISEHAFGNALDIAAFTLADGRRISVKDGWRGLPEEQGFLRDVQGGACRMFTTVLAPGSNVYHYDHIHVDLMRRSSGRVICQPAAVSGEMIAARASGG----------RYAGR--------------------------DPGVTGSIGSKRRVLS--NRATNDDDWVEDE 399          
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A6L5FMF6_9HYPH (Extensin n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FMF6_9HYPH)

HSP 1 Score: 272 bits (695), Expect = 4.240e-85
Identity = 168/346 (48.55%), Postives = 191/346 (55.20%), Query Frame = 1
Query:   49 ISPPETFAPQRPPSYGT---------PPAYPQASPDYSHGPQPNMGVRNLAAPPDDRFTRDDRFTPAPQRVPDRAPGRFDPPSQQSLPA--------LGPARPQRIGGAT-PVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSESFDPRNDPFAYRRGDPTPTGSIAGKRKAVKPPEPDXXXXDWIEDDGPRMSVD 1032
            I+ P  + P R P+ G          PP  PQ   D +   +P +       P    + R     P P+R  + +   FD P   + P         LGPA  QRI G+  PV LKP ATLACPIVSALDQWI  +VQPAA  WF QPVV I+QISAYSCRGMNG   ARISEHAFGNALDIAAF  ADGR +T+K GW+GSPEE GFL DVQGAAC++F+TVLAPGSNRFHYDHIHVDLMRR  GR VC P A+ GE  AARA                                         RRGDPT TGSI           PD    DW+E DGPR S +
Sbjct:  108 IAQPPQWQPSRLPAAGPEIAAPLLIHPPGVPQPDEDVAAD-EPEIDPAPAITPARPFYRRPVEAAPLPRRAGEPS---FDQPPPATFPTTLHRPSVLLGPAPGQRITGSIGPVTLKPAATLACPIVSALDQWITTAVQPAAMRWFGQPVVGIRQISAYSCRGMNGNPRARISEHAFGNALDIAAFTLADGRTITIKRGWRGSPEEVGFLHDVQGAACQSFSTVLAPGSNRFHYDHIHVDLMRRGGGRVVCNPSAIPGEVAAARAAQRKGYA----------------------------------RRGDPTVTGSITAYAGRSDEGGPDND--DWVEHDGPRESAE 413          
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A1Q4DJH7_9HYPH (Extensin-like_C domain-containing protein n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DJH7_9HYPH)

HSP 1 Score: 273 bits (697), Expect = 5.830e-85
Identity = 148/245 (60.41%), Postives = 167/245 (68.16%), Query Frame = 1
Query:   85 PSYGTPPAYPQASPDYSHGPQPNMGVRNLAAPP------DDRFTRDDRFTPAPQRVPDRAPGRFDPPSQQS-----LPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARA 786
            P YG+ P  P A P Y+    P       AAPP      DD    DD   P     P   P  + PP+  S     +P LGP +    G ATPV + P ATLACPIVSALDQW++ +VQPAA  WF QPVVEIKQISAYSCRGMNGQ GARISEHAFGNALDIAAFV ADGR++TVK  W G+P+EQ FL DVQG ACETFTTVLAPGSN++HYDHIHVDLMRR+S R +CQP A+DG    ARA
Sbjct:  153 PEYGSVPP-PSARPGYAPANAPFGAQPVRAAPPPELESEDDDDVPDDAIRPGQGSAPATRPA-YTPPAAASPRVPQIPQLGPPKGLYTGSATPVAVTPAATLACPIVSALDQWVSNTVQPAAHRWFGQPVVEIKQISAYSCRGMNGQPGARISEHAFGNALDIAAFVLADGRKITVKKNWNGAPDEQAFLHDVQGGACETFTTVLAPGSNKYHYDHIHVDLMRRASRRLICQPAAIDGRVAYARA 395          
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: UPI0005769A0C (extensin family protein n=1 Tax=Bradyrhizobium japonicum TaxID=375 RepID=UPI0005769A0C)

HSP 1 Score: 265 bits (676), Expect = 7.390e-84
Identity = 135/204 (66.18%), Postives = 154/204 (75.49%), Query Frame = 1
Query:  265 PSQQSLPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSE 876
            P+QQ LP LGPA+   +    PV +KPTATLACPIVS LD+W+A +VQP+A  WF   VVEIKQISAYSCRGMNG + A ISEHAFGNALDIAAFV ADGRRVTVK+GW+G PEEQGFLRDVQ  AC  FTTVLAPGSN +HYDHIHVDLMRR+S R +CQP AV G+++A RA+   N  A RR+P   G    R  T R  E
Sbjct:   83 PTQQPLPRLGPAQGNPVVAVGPVAIKPTATLACPIVSELDRWLADTVQPSAMRWFGARVVEIKQISAYSCRGMNGNSHAHISEHAFGNALDIAAFVLADGRRVTVKDGWRGMPEEQGFLRDVQSGACAHFTTVLAPGSNVYHYDHIHVDLMRRASRRLICQPAAVSGDEVAGRAQ-QRNPYAGRRDPYVTGSLGTRKSTTRKQE 285          
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A0A1H0CXU2_9BRAD (Uncharacterized conserved protein n=5 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1H0CXU2_9BRAD)

HSP 1 Score: 268 bits (686), Expect = 7.530e-84
Identity = 158/271 (58.30%), Postives = 181/271 (66.79%), Query Frame = 1
Query:   13 PLSLTPPGL---ETQISPPETFAPQRPPSYGTPPAYPQASPDYSHGPQPNMGVRNLAAPPDDRFTRDDRFTPAPQRVPDRAPGRFDPPSQQSLPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGNSNLVASR 816
            P+SL+ PG+   E +I  P   AP + P Y   PAY                      PP DR++       AP + P   P    P S  + P LGPA+   +    PV +KPTATLACPIVSALD+W+A SVQPAA+ WF   VVEIKQISAYSCRGMNG A A ISEHAFGNALDIAAFV ADGRR+TVK+GW+G PEEQGFLRDVQGAAC+ F TVLAPGSN +HYDHIHVDLMRR+S R +CQP AV GE+IAARA G  N  ASR
Sbjct:  136 PISLSAPGVAPQEDEIDLPAEAAPGQAP-YRNAPAY----------------------PPRDRYS-------APSQAPYSEPYSQGPAS--APPRLGPAQGNAVNTVGPVAIKPTATLACPIVSALDRWLADSVQPAAQRWFGARVVEIKQISAYSCRGMNGNAHAHISEHAFGNALDIAAFVLADGRRITVKDGWKGMPEEQGFLRDVQGAACQQFNTVLAPGSNVYHYDHIHVDLMRRASRRIICQPAAVPGEEIAARA-GGRNPYASR 373          
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Match: A4YZM2_BRASO (Extensin-like_C domain-containing protein n=1 Tax=Bradyrhizobium sp. (strain ORS 278) TaxID=114615 RepID=A4YZM2_BRASO)

HSP 1 Score: 267 bits (682), Expect = 2.240e-83
Identity = 151/263 (57.41%), Postives = 172/263 (65.40%), Query Frame = 1
Query:   82 PPSYGTPPAYPQASPDYSHGPQPNMGVRNLAAPPDDRFTRDDRFTPAPQRVPDRAPGRFDPPSQQSLPALGPARPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEIKQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGSPEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQPHAVDGEQIAARARGN-----------SNLVASRREPMFAG 837
            PPS GTPP  P          +P  G  ++  PPD          PA    P  AP    P   Q  P LGP+R   +G   PV +KPTATLACPIVSALD W+A SVQPAA+ WF Q VVEIKQISAYSCRGMNG   A ISEHAFGNALDIAAF  ADGRR+TVK+GW G PEEQGFLRDVQG AC+ FTTVLAPGSN +HYDHIHVDLMRR+S R +CQP A  GE +AARA+             ++ +ASR++P   G
Sbjct:  139 PPSLGTPPGAPLQL-------EPPAGEDDVNLPPD-------ASDPASPYRPQAAPRTAYP---QDPPRLGPSR-DPVGATGPVAVKPTATLACPIVSALDHWLAESVQPAAQRWFGQRVVEIKQISAYSCRGMNGNPSAHISEHAFGNALDIAAFTLADGRRITVKDGWIGLPEEQGFLRDVQGGACQQFTTVLAPGSNSYHYDHIHVDLMRRASRRLICQPAAQSGEAVAARAQQRRYGYGQREPDVTSSIASRKQPKSIG 383          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15771.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127ERF6_9HYPH2.080e-10655.27Extensin n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=6... [more]
A0A833GCB0_9HYPH1.460e-8656.57Extensin n=1 Tax=Pseudorhodoplanes sp. TaxID=19343... [more]
A0A4Q6ARP4_9SPHI5.940e-8667.01Extensin family protein (Fragment) n=1 Tax=Sphingo... [more]
A0A1W6ZKP4_9HYPH2.480e-8559.39Extensin-like_C domain-containing protein n=2 Tax=... [more]
W3RNX3_9BRAD3.550e-8558.63Extensin n=1 Tax=Afipia sp. P52-10 TaxID=1429916 R... [more]
A0A6L5FMF6_9HYPH4.240e-8548.55Extensin n=1 Tax=Hyphomicrobiales bacterium TaxID=... [more]
A0A1Q4DJH7_9HYPH5.830e-8560.41Extensin-like_C domain-containing protein n=1 Tax=... [more]
UPI0005769A0C7.390e-8466.18extensin family protein n=1 Tax=Bradyrhizobium jap... [more]
A0A1H0CXU2_9BRAD7.530e-8458.30Uncharacterized conserved protein n=5 Tax=Bradyrhi... [more]
A4YZM2_BRASO2.240e-8357.41Extensin-like_C domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15771contigP-wetherbeei_contig15771:49..1083 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1429916.X566_15135
PFAMsExtensin-like_C
Model size1035
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.82e-86
EggNOG OGsCOG3921@1|root,COG3921@2|Bacteria,1N3WR@1224|Proteobacteria,2U1ZC@28211|Alphaproteobacteria,3JQY3@41294|Bradyrhizobiaceae
DescriptionExtensin-like protein C-terminus
Cds size1035
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186066.9495554-CDS-P-wetherbeei_contig15771:48..10831683186066.9495554-CDS-P-wetherbeei_contig15771:48..1083Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15771 49..1083 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15771.1.1prot_P-wetherbeei_contig15771.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15771 49..1083 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15771.1.1

>prot_P-wetherbeei_contig15771.1.1 ID=prot_P-wetherbeei_contig15771.1.1|Name=mRNA_P-wetherbeei_contig15771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=345bp
LAGPPLSLTPPGLETQISPPETFAPQRPPSYGTPPAYPQASPDYSHGPQP
NMGVRNLAAPPDDRFTRDDRFTPAPQRVPDRAPGRFDPPSQQSLPALGPA
RPQRIGGATPVELKPTATLACPIVSALDQWIAASVQPAARHWFNQPVVEI
KQISAYSCRGMNGQAGARISEHAFGNALDIAAFVFADGRRVTVKNGWQGS
PEEQGFLRDVQGAACETFTTVLAPGSNRFHYDHIHVDLMRRSSGRRVCQP
HAVDGEQIAARARGNSNLVASRREPMFAGRPDPRPPTRRSSESFDPRNDP
FAYRRGDPTPTGSIAGKRKAVKPPEPDDDDDDWIEDDGPRMSVD*
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mRNA from alignment at P-wetherbeei_contig15771:49..1083+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15771.1.1 ID=mRNA_P-wetherbeei_contig15771.1.1|Name=mRNA_P-wetherbeei_contig15771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1035bp|location=Sequence derived from alignment at P-wetherbeei_contig15771:49..1083+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGCCGGTCCGCCGCTCTCGCTCACGCCGCCCGGCCTCGAGACCCAGAT CAGCCCGCCCGAGACCTTCGCCCCGCAGCGGCCGCCGAGCTACGGTACGC CGCCGGCCTATCCGCAGGCGAGCCCCGACTACAGCCACGGCCCGCAACCC AACATGGGTGTACGCAATTTGGCGGCGCCGCCCGACGATCGCTTCACCCG CGACGACCGCTTCACGCCCGCGCCACAGCGCGTGCCGGATCGCGCACCCG GACGTTTCGATCCGCCCTCGCAGCAGTCGCTTCCGGCGCTCGGCCCGGCA CGGCCGCAACGCATCGGCGGCGCGACGCCGGTGGAGCTGAAGCCGACGGC CACGCTCGCCTGTCCGATCGTCTCCGCGCTCGATCAGTGGATCGCGGCGT CCGTGCAGCCGGCGGCGCGCCACTGGTTCAATCAGCCGGTGGTCGAGATC AAGCAGATCTCCGCCTATTCCTGCCGCGGCATGAACGGCCAGGCCGGCGC GCGCATTTCCGAGCATGCCTTCGGCAACGCGCTCGACATCGCCGCTTTCG TGTTCGCCGACGGCCGCCGCGTCACCGTCAAGAACGGCTGGCAAGGCTCG CCGGAGGAGCAGGGCTTCCTGCGCGATGTGCAGGGCGCCGCTTGCGAGAC GTTCACCACGGTGCTGGCGCCCGGCTCCAACCGCTTCCACTACGACCACA TCCACGTCGACCTGATGCGGCGTTCGAGCGGCCGGCGTGTCTGCCAGCCG CACGCGGTCGACGGCGAGCAGATTGCTGCCCGCGCGCGCGGCAATTCGAA CCTGGTGGCGAGCCGCCGCGAGCCGATGTTCGCCGGCCGGCCCGATCCGC GTCCGCCGACGCGCCGGTCGTCCGAGTCGTTCGATCCGCGCAACGATCCG TTCGCCTACCGTCGCGGCGATCCGACGCCCACCGGCTCGATTGCCGGCAA GCGCAAGGCGGTGAAGCCGCCGGAGCCGGACGATGACGACGACGACTGGA TCGAGGACGACGGTCCGCGCATGTCGGTGGATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15771:49..1083+

>mRNA_P-wetherbeei_contig15771.1.1 ID=mRNA_P-wetherbeei_contig15771.1.1|Name=mRNA_P-wetherbeei_contig15771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1035bp|location=Sequence derived from alignment at P-wetherbeei_contig15771:49..1083+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGCCGGTCCGCCGCTCTCGCTCACGCCGCCCGGCCTCGAGACCCAGAT
CAGCCCGCCCGAGACCTTCGCCCCGCAGCGGCCGCCGAGCTACGGTACGC
CGCCGGCCTATCCGCAGGCGAGCCCCGACTACAGCCACGGCCCGCAACCC
AACATGGGTGTACGCAATTTGGCGGCGCCGCCCGACGATCGCTTCACCCG
CGACGACCGCTTCACGCCCGCGCCACAGCGCGTGCCGGATCGCGCACCCG
GACGTTTCGATCCGCCCTCGCAGCAGTCGCTTCCGGCGCTCGGCCCGGCA
CGGCCGCAACGCATCGGCGGCGCGACGCCGGTGGAGCTGAAGCCGACGGC
CACGCTCGCCTGTCCGATCGTCTCCGCGCTCGATCAGTGGATCGCGGCGT
CCGTGCAGCCGGCGGCGCGCCACTGGTTCAATCAGCCGGTGGTCGAGATC
AAGCAGATCTCCGCCTATTCCTGCCGCGGCATGAACGGCCAGGCCGGCGC
GCGCATTTCCGAGCATGCCTTCGGCAACGCGCTCGACATCGCCGCTTTCG
TGTTCGCCGACGGCCGCCGCGTCACCGTCAAGAACGGCTGGCAAGGCTCG
CCGGAGGAGCAGGGCTTCCTGCGCGATGTGCAGGGCGCCGCTTGCGAGAC
GTTCACCACGGTGCTGGCGCCCGGCTCCAACCGCTTCCACTACGACCACA
TCCACGTCGACCTGATGCGGCGTTCGAGCGGCCGGCGTGTCTGCCAGCCG
CACGCGGTCGACGGCGAGCAGATTGCTGCCCGCGCGCGCGGCAATTCGAA
CCTGGTGGCGAGCCGCCGCGAGCCGATGTTCGCCGGCCGGCCCGATCCGC
GTCCGCCGACGCGCCGGTCGTCCGAGTCGTTCGATCCGCGCAACGATCCG
TTCGCCTACCGTCGCGGCGATCCGACGCCCACCGGCTCGATTGCCGGCAA
GCGCAAGGCGGTGAAGCCGCCGGAGCCGGACGATGACGACGACGACTGGA
TCGAGGACGACGGTCCGCGCATGTCGGTGGATTGA
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