mRNA_P-wetherbeei_contig1576.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Match: A0A6H5K350_9PHAE (Letm1 RBD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K350_9PHAE) HSP 1 Score: 135 bits (340), Expect = 2.930e-33 Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 1
Query: 13 PKSKPPTFGLLKPSDVEIEAIKDKSESGIKELEEEYRLYQRARREPAD---------PAGAEAKPDAAVIPAGKVATAL-KRAPAVAYDAAAAVLRFTWAVLLDPRLLAAKAGEARVALSSMLQHYWIGSKLLWNDMKTAQKILKRVLRGSALTRRERKQLLRTTSDIFRIVPMAV 510
P+ + LLKPSD EIE +KD+S K+L+EEY LY+ AR++P P G + + K A A+ K+ P + ++A A++ F W ++ +P +L K G A+ L +HYW+G KLLW D+KTA+KIL+R+LRG +TRRERKQLLRT SDIFR+VP+AV
Sbjct: 190 PRQRESLGDLLKPSDKEIEPVKDESAQRFKDLQEEYTLYEAARKDPKQASEQVCCLFPRGLSKVEQSQMALTRKKAVAMVKKIPVMTWNATKAIVLFLWEIIKNPIVLKDKLGVAQYHLKEFGRHYWLGLKLLWGDIKTAKKILRRILRGFPMTRRERKQLLRTVSDIFRMVPLAV 365
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Match: A0A482T0K9_9ARCH (LETM1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0K9_9ARCH) HSP 1 Score: 122 bits (307), Expect = 1.890e-31 Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = 1
Query: 283 VLLDPRLLAAKAGEARVALSSMLQHYWIGSKLLWNDMKTAQKILKRVLRGSALTRRERKQLLRTTSDIFRIVPMAVFVIVPFMELLLPVALKLFPNMLPSTFQ 591
++++PR K EA + HYW+G+KLLW+++K ILKRVL+G +TRRER+QLLRTT+DIFR+VP AVF+IVPFMELLLP ALKLFPNMLPSTFQ
Sbjct: 110 IVMNPR----KTWEA---IKHEAHHYWMGTKLLWSEIKITTGILKRVLQGHGITRRERRQLLRTTTDIFRLVPFAVFIIVPFMELLLPFALKLFPNMLPSTFQ 205
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Match: A0A8K1FJD9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJD9_PYTOL) HSP 1 Score: 129 bits (324), Expect = 3.800e-31 Identity = 68/124 (54.84%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 220 LKRAPAVAYDAAAAVLRFTWAVLLDPRLLAAKAGEARVALSSMLQHYWIGSKLLWNDMKTAQKILKRVLRGSALTRRERKQLLRTTSDIFRIVPMAVFVIVPFMELLLPVALKLFPNMLPSTFQ 591
++R P + D A A+ R + DP + A G + + + L+HYW+GSKLL+ D+ T+ +IL+R+LRG+AL+RRERKQL RT +D+ R+VP A FVIVPFMELLLPVALK+FPNMLPSTF+
Sbjct: 190 IRRVPQLTVDGAKALGRGIQLIFTDPAAVKAWLGRLKDKVKAELKHYWVGSKLLYADVTTSTRILRRLLRGNALSRRERKQLQRTVADLVRLVPFAFFVIVPFMELLLPVALKMFPNMLPSTFK 313
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Match: B8BVV1_THAPS (Letm1 RBD domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVV1_THAPS) HSP 1 Score: 122 bits (305), Expect = 1.830e-30 Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 1
Query: 286 LLDPRLLAAKAGEARVALSSMLQHYWIGSKLLWNDMKTAQKILKRVLRGSALTRRERKQLLRTTSDIFRIVPMAVFVIVPFMELLLPVALKLFPNMLPSTFQ 591
+ P+ K GE + A HYW+GSKLL D++TA+ IL R LRGS L+RRERKQLLRT +D+FR+VPM++FV+VPFME LP ALKLFPNMLPSTFQ
Sbjct: 1 MTHPKEFRKKLGELKEAAVKEAHHYWMGSKLLAADIRTARHILGRTLRGSTLSRRERKQLLRTVTDVFRLVPMSIFVLVPFMEFALPFALKLFPNMLPSTFQ 102
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Match: K0R5T2_THAOC (LETM1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R5T2_THAOC) HSP 1 Score: 122 bits (306), Expect = 2.210e-30 Identity = 61/105 (58.10%), Postives = 79/105 (75.24%), Query Frame = 1
Query: 277 WAVLLDPRLLAAKAGEARVALSSMLQHYWIGSKLLWNDMKTAQKILKRVLRGSALTRRERKQLLRTTSDIFRIVPMAVFVIVPFMELLLPVALKLFPNMLPSTFQ 591
W L P L +K E + + HY++GSKLLW D++TA+ I+ R LRGS L+RRERKQL+RT +D+FR+VPM+VFV++PFME LP ALK+FPNMLPSTFQ
Sbjct: 100 WFYLTHPSDLRSKLNEWKELAKAEAHHYYMGSKLLWADIRTARHIMARTLRGSTLSRRERKQLIRTATDVFRLVPMSVFVLIPFMEFALPFALKIFPNMLPSTFQ 204
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Match: A0A5D6YNX5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YNX5_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.430e-30 Identity = 66/124 (53.23%), Postives = 93/124 (75.00%), Query Frame = 1
Query: 220 LKRAPAVAYDAAAAVLRFTWAVLLDPRLLAAKAGEARVALSSMLQHYWIGSKLLWNDMKTAQKILKRVLRGSALTRRERKQLLRTTSDIFRIVPMAVFVIVPFMELLLPVALKLFPNMLPSTFQ 591
LKR P + D A A++R V DP + A + + + + L+HYW+G+KLL+ D+ T+ +IL+R++RG+AL+RRERKQL RT +D+ R+VP + F+IVPFMELLLPVALKLFPNMLPST++
Sbjct: 185 LKRVPRLTLDGAKALVRGVALVFTDPAAVKAWWAKTKEHIKAELKHYWLGTKLLYADVSTSTRILRRLVRGNALSRRERKQLQRTVADLLRLVPFSFFLIVPFMELLLPVALKLFPNMLPSTYK 308
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Match: A0A7S2XKQ2_9STRA (Mitochondrial proton/calcium exchanger protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKQ2_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.330e-30 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 277 WAVLLDPRLLAAKAGEARVALSSMLQHYWIGSKLLWNDMKTAQKILKRVLRGSALTRRERKQLLRTTSDIFRIVPMAVFVIVPFMELLLPVALKLFPNMLPSTFQ 591
W L +PR AK E + A HYW+G+KLL D +TA+KI+ R L+GSALTRRERKQLLRT SD+FR+VPM++F+I+PFME LP ALK+FPNMLPSTFQ
Sbjct: 97 WFYLTNPREFRAKLIELKEAAKKEAHHYWMGTKLLAADFRTARKIMMRTLQGSALTRRERKQLLRTVSDLFRLVPMSMFLIIPFMEFALPFALKIFPNMLPSTFQ 201
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Match: A0A7S2KCP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCP3_9STRA) HSP 1 Score: 122 bits (305), Expect = 3.800e-30 Identity = 65/105 (61.90%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 277 WAVLLDPRLLAAKAGEARVALSSMLQHYWIGSKLLWNDMKTAQKILKRVLRGSALTRRERKQLLRTTSDIFRIVPMAVFVIVPFMELLLPVALKLFPNMLPSTFQ 591
W L P+ L K E + + HY++GSKLL D++TA+ IL R L GS LTRRERKQL+RT SD+FR+VPM+VFV+VPFME LLP ALKLFPNMLPSTFQ
Sbjct: 123 WYFLTHPKELRVKLNEFKELVKKEANHYYMGSKLLVADIRTARTILLRTLNGSHLTRRERKQLVRTVSDVFRLVPMSVFVLVPFMEFLLPFALKLFPNMLPSTFQ 227
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Match: A0A1W0ABY0_9STRA (LETM1 and EF-hand domain-containing protein 1 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABY0_9STRA) HSP 1 Score: 120 bits (301), Expect = 6.990e-30 Identity = 64/129 (49.61%), Postives = 91/129 (70.54%), Query Frame = 1
Query: 205 KVATALKRAPAVAYDAAAAVLRFTWAVLLDPRLLAAKAGEARVALSSMLQHYWIGSKLLWNDMKTAQKILKRVLRGSALTRRERKQLLRTTSDIFRIVPMAVFVIVPFMELLLPVALKLFPNMLPSTFQ 591
K + +K PA+A A + + ++ +P+ E + + L+HYWIG+KLL+ D+ T+ +IL+R++RG+ALTRRERKQL RT +D+ R+VP A FVIVPFMELLLP ALK+FPNMLPST++
Sbjct: 116 KAVSFVKNTPAMAISALKTLKEWIRILIKEPQRAQTWLKETKEHIGHELKHYWIGTKLLYADVSTSTRILRRLVRGNALTRRERKQLQRTVADLLRLVPFAFFVIVPFMELLLPFALKMFPNMLPSTYK 244
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Match: A0A024G0Q4_9STRA (Mitochondrial proton/calcium exchanger protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G0Q4_9STRA) HSP 1 Score: 125 bits (314), Expect = 8.420e-30 Identity = 65/124 (52.42%), Postives = 90/124 (72.58%), Query Frame = 1
Query: 220 LKRAPAVAYDAAAAVLRFTWAVLLDPRLLAAKAGEARVALSSMLQHYWIGSKLLWNDMKTAQKILKRVLRGSALTRRERKQLLRTTSDIFRIVPMAVFVIVPFMELLLPVALKLFPNMLPSTFQ 591
LKR P + DA A+ R + + +P+ +A G+ + + L HYW+G+KLL D T+ +I++RVL G+A++RRERKQL RT +D+ R+VP A FV+VPFMELLLPVALK+FPNMLPSTF+
Sbjct: 205 LKRTPQLTRDALRALCRGIYIIFREPQTVALYWGKLKEKVKKELHHYWLGTKLLCADTTTSTRIIRRVLHGNAISRRERKQLQRTVADLLRLVPFAFFVVVPFMELLLPVALKMFPNMLPSTFK 328 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1576.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1576.4.1 >prot_P-wetherbeei_contig1576.4.1 ID=prot_P-wetherbeei_contig1576.4.1|Name=mRNA_P-wetherbeei_contig1576.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp MAQTPKSKPPTFGLLKPSDVEIEAIKDKSESGIKELEEEYRLYQRARREPback to top mRNA from alignment at P-wetherbeei_contig1576:5437..6729+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1576.4.1 ID=mRNA_P-wetherbeei_contig1576.4.1|Name=mRNA_P-wetherbeei_contig1576.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1293bp|location=Sequence derived from alignment at P-wetherbeei_contig1576:5437..6729+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1576:5437..6729+ >mRNA_P-wetherbeei_contig1576.4.1 ID=mRNA_P-wetherbeei_contig1576.4.1|Name=mRNA_P-wetherbeei_contig1576.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig1576:5437..6729+ (Phaeothamnion wetherbeei SAG_119_79)back to top |