mRNA_P-wetherbeei_contig15656.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15656.1.1
Unique NamemRNA_P-wetherbeei_contig15656.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Match: A0A835YKX9_9STRA (Putative cysteine protease family C01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX9_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.210e-71
Identity = 107/149 (71.81%), Postives = 118/149 (79.19%), Query Frame = 1 
Query:    4 MVSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAKDNACKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFKSYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG 450
            MV LSEQQLVDCAQ FDNHGCNGGLPSHAFEYI   GGLDTE+ YPY A D  C +D + VGATV+A+VNITYQDE EL+ A+   GPVS+AF V  DFKSYA GVYDNP CGS PDEVNHAVL+VGYGTD+ G      YWI+KNSWG
Sbjct:  243 MVLLSEQQLVDCAQAFDNHGCNGGLPSHAFEYITSAGGLDTEQGYPYSATDGVCVFDPVAVGATVRASVNITYQDEKELEQAVGSAGPVSVAFDVMRDFKSYAAGVYDNPDCGSRPDEVNHAVLSVGYGTDDNGT----PYWIIKNSWG 387
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BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Match: W2L7B0_PHYPR (Pept_C1 domain-containing protein (Fragment) n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2L7B0_PHYPR)

HSP 1 Score: 201 bits (510), Expect = 2.610e-63
Identity = 94/150 (62.67%), Postives = 113/150 (75.33%), Query Frame = 1 
Query:    1 EMVSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAKDNACKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFKSYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG 450
            E   LSEQ L+DCAQ+FDNHGCNGGLPSHAFEY++Y GGLDTEE YPY AK+  CK+++  VGA V   VNIT ++E EL+AA+   GPVSIAFQV SDF+ Y  GVY++  C S   +VNHAVLAVGYG ++G      D+WIVKNSWG
Sbjct:    9 EFTILSEQNLLDCAQNFDNHGCNGGLPSHAFEYVKYNGGLDTEETYPYEAKEGKCKFNTYHVGAQVDQVVNITARNEKELKAAVGSTGPVSIAFQVVSDFRFYKSGVYESKECHSGEKDVNHAVLAVGYGVEDGK-----DHWIVKNSWG 153
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BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Match: D7FQ96_ECTSI (Cathepsin H n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ96_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 3.400e-63
Identity = 100/151 (66.23%), Postives = 117/151 (77.48%), Query Frame = 1 
Query:    1 EMVSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAKDNA-CKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFKSYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG 450
            EMV LSEQQL+DCA  +DNHGCNGGLPSHAFEYI   GGLDTEE YPY A+++  C +   G+GA V  +VNIT+QDE EL  A+   GPVS+AFQV  DFK+YAGGVYDNP+C +LP++VNHAVL VGYGT E G     DYWI+KNSWG
Sbjct:  492 EMVLLSEQQLLDCAGAYDNHGCNGGLPSHAFEYIASAGGLDTEEVYPYMAEESGLCSFADRGIGADVMRSVNITFQDERELLEAVGNTGPVSVAFQVAPDFKAYAGGVYDNPSCSTLPEQVNHAVLCVGYGTTEEGV----DYWIIKNSWG 638
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BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Match: A0A833SQZ0_PHYIN (Papain family cysteine protease n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SQZ0_PHYIN)

HSP 1 Score: 202 bits (513), Expect = 8.820e-63
Identity = 95/150 (63.33%), Postives = 113/150 (75.33%), Query Frame = 1 
Query:    1 EMVSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAKDNACKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFKSYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG 450
            E   LSEQ L+DCAQ+FDNHGCNGGLPSHAFEYI+Y GGLDTEE YPY AK+  CK+++  VG  V   VNIT ++ENEL+AA+   GPVSIAFQV SDF+ Y  GVY++  C S   +VNHAVLAVGYG ++G      D+WIVKNSWG
Sbjct:   81 EFTILSEQNLLDCAQNFDNHGCNGGLPSHAFEYIKYNGGLDTEETYPYEAKEGKCKFNTYHVGVQVDQVVNITTRNENELRAAVGSTGPVSIAFQVVSDFRFYKSGVYESKECRSGEKDVNHAVLAVGYGVEDGK-----DHWIVKNSWG 225
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BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Match: A0A7S3YQA3_9EUKA (Hypothetical protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YQA3_9EUKA)

HSP 1 Score: 206 bits (524), Expect = 1.530e-62
Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 1 
Query:    4 MVSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAKDNACKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFKSYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG 450
            +VSLSEQ L+DCAQ F N GCNGGLPS AFE++RY GGLDTE AYPY  KD+ C++ +  VGATV++ VNIT+QDE+EL  A+A  GPVSIAFQV SDF+ Y  GVYD+  C S   +VNHAVLAVG+ TDE GK    DYWIVKNSWG
Sbjct:  198 LVSLSEQNLIDCAQAFGNMGCNGGLPSQAFEFVRYNGGLDTEAAYPYEGKDDTCRFSNASVGATVKSQVNITFQDEDELLKAVATAGPVSIAFQVASDFRFYKQGVYDSTVCKSGQKDVNHAVLAVGFDTDEDGK----DYWIVKNSWG 342
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BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Match: A0A834Y961_9MAGN (Pept_C1 domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834Y961_9MAGN)

HSP 1 Score: 198 bits (504), Expect = 2.040e-61
Identity = 95/148 (64.19%), Postives = 111/148 (75.00%), Query Frame = 1 
Query:    7 VSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAKDNACKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFKSYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG 450
            +SLSEQQLVDCA  F+N GC+GGLPS AFEYI+Y GGLDTEEAYPY  KD ACK+ S  VG  V  +VNIT   E+EL+ A+AF  PVS+AFQV  +F+ YAGGVY + TCGS P +VNHAVLAVGYG + G       YW+VKNSWG
Sbjct:   90 ISLSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGACKFSSQNVGVHVMESVNITLGAEDELKHAVAFARPVSVAFQVVKEFRFYAGGVYTSDTCGSTPMDVNHAVLAVGYGIENGVP-----YWLVKNSWG 232
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BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Match: A0A329RHW3_9STRA (Thiol protease aleurain-like n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RHW3_9STRA)

HSP 1 Score: 202 bits (513), Expect = 5.830e-61
Identity = 96/150 (64.00%), Postives = 115/150 (76.67%), Query Frame = 1 
Query:    1 EMVSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAKDNACKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFKSYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG 450
            E   LSEQ L+DCAQ+FDNHGCNGGLPSHAFEY++Y GGLDTEE YPY AK+  CK+++  VGA V   VNIT ++ENEL+AA+   GPVSIAFQV SDF+ Y  GVY++  C S   +VNHAVLAVGYG ++G KN    +WIVKNSWG
Sbjct:  231 EFTILSEQNLLDCAQNFDNHGCNGGLPSHAFEYVKYNGGLDTEETYPYEAKEGKCKFNTYHVGAQVDQVVNITARNENELKAAVGSTGPVSIAFQVVSDFRFYKSGVYESKECHSGEKDVNHAVLAVGYGVEDG-KN----HWIVKNSWG 375
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BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Match: V9F658_PHYPR (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=V9F658_PHYPR)

HSP 1 Score: 202 bits (513), Expect = 6.140e-61
Identity = 94/150 (62.67%), Postives = 114/150 (76.00%), Query Frame = 1 
Query:    1 EMVSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAKDNACKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFKSYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG 450
            E   LSEQ L+DCAQ+FDNHGCNGGLPSHAFEY++Y GGLDTEE YPY AK+  CK+++  VGA V   VNIT ++ENEL+AA+   GPVSIAFQV SDF+ Y  G+Y++  C S   +VNHAVLAVGYG ++G      D+WIVKNSWG
Sbjct:  233 EFTILSEQNLLDCAQNFDNHGCNGGLPSHAFEYVKYNGGLDTEETYPYEAKEGKCKFNTYHVGAQVDQVVNITARNENELKAAVGSTGPVSIAFQVVSDFRFYKSGMYESKECHSGEKDVNHAVLAVGYGVEDGK-----DHWIVKNSWG 377
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BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Match: UPI001CFA2025 (thiol protease aleurain-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA2025)

HSP 1 Score: 199 bits (507), Expect = 1.300e-60
Identity = 95/148 (64.19%), Postives = 110/148 (74.32%), Query Frame = 1 
Query:    7 VSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAKDNACKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFKSYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG 450
            +SLSEQQLVDCAQ F+N GCNGGLPS AFEYI+Y GGLDTEEAYPY  KD  CK+ S  VG  V  +VNIT   E+EL+ A+AFV PVS+AFQV  DF+ Y  GVY + TCGS P +VNHAVLAVGYG + G       YW++KNSWG
Sbjct:  184 ISLSEQQLVDCAQAFNNFGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVVDSVNITLGAEDELKHAVAFVRPVSVAFQVVKDFRLYKSGVYSSDTCGSTPMDVNHAVLAVGYGVENGVP-----YWLIKNSWG 326
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BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Match: M4BUI3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUI3_HYAAE)

HSP 1 Score: 201 bits (511), Expect = 1.570e-60
Identity = 95/150 (63.33%), Postives = 113/150 (75.33%), Query Frame = 1 
Query:    1 EMVSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAKDNACKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFKSYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG 450
            E + LSEQ L+DCAQDFDNHGCNGGLPSHAFEY++Y GGLDTE++Y Y AK+  CK+++  VGA V   VNIT QDE EL  A+  VGPVSIAFQV SDF+ Y  GVY++  C S   +VNHAVLAVGYG ++G      D+WIVKNSWG
Sbjct:  243 EFIILSEQNLLDCAQDFDNHGCNGGLPSHAFEYVKYNGGLDTEDSYSYEAKEGKCKFNTHHVGAQVDQVVNITSQDEVELMVAVGTVGPVSIAFQVVSDFRFYKSGVYESSECHSGEKDVNHAVLAVGYGVEDGK-----DHWIVKNSWG 387
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15656.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKX9_9STRA1.210e-7171.81Putative cysteine protease family C01A n=1 Tax=Tri... [more]
W2L7B0_PHYPR2.610e-6362.67Pept_C1 domain-containing protein (Fragment) n=1 T... [more]
D7FQ96_ECTSI3.400e-6366.23Cathepsin H n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A833SQZ0_PHYIN8.820e-6363.33Papain family cysteine protease n=1 Tax=Phytophtho... [more]
A0A7S3YQA3_9EUKA1.530e-6265.77Hypothetical protein n=3 Tax=Lotharella globosa Ta... [more]
A0A834Y961_9MAGN2.040e-6164.19Pept_C1 domain-containing protein n=1 Tax=Tetracen... [more]
A0A329RHW3_9STRA5.830e-6164.00Thiol protease aleurain-like n=2 Tax=Phytophthora ... [more]
V9F658_PHYPR6.140e-6162.67Uncharacterized protein n=19 Tax=Phytophthora TaxI... [more]
UPI001CFA20251.300e-6064.19thiol protease aleurain-like n=1 Tax=Mangifera ind... [more]
M4BUI3_HYAAE1.570e-6063.33Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15656contigP-wetherbeei_contig15656:1..1581 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog227086.JGI_V11_50722
Preferred nameCTSH
PFAMsInhibitor_I29,Peptidase_C1
Model size450
Max annot lvl2759|Eukaryota
KEGG koko:K01366
KEGG Pathwayko04142,ko04210,map04142,map04210
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000165,GO:0000323,GO:0001101,GO:0001520,GO:0001655,GO:0001656,GO:0001669,GO:0001763,GO:0001775,GO:0001822,GO:0001894,GO:0001906,GO:0001909,GO:0001913,GO:0002009,GO:0002250,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002449,GO:0002456,GO:0002460,GO:0002682,GO:0002764,GO:0003674,GO:0003824,GO:0004175,GO:0004177,GO:0004197,GO:0004252,GO:0004888,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005770,GO:0005771,GO:0005773,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0006464,GO:0006468,GO:0006508,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006915,GO:0006919,GO:0006955,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0008047,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008234,GO:0008236,GO:0008238,GO:0008284,GO:0008656,GO:0009056,GO:0009057,GO:0009653,GO:0009719,GO:0009725,GO:0009887,GO:0009888,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0010632,GO:0010634,GO:0010646,GO:0010647,GO:0010813,GO:0010815,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0012505,GO:0016192,GO:0016310,GO:0016485,GO:0016504,GO:0016505,GO:0016787,GO:0017144,GO:0017171,GO:0019222,GO:0019538,GO:0019882,GO:0019953,GO:0022414,GO:0022603,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030108,GO:0030141,GO:0030162,GO:0030163,GO:0030234,GO:0030323,GO:0030324,GO:0030334,GO:0030335,GO:0030984,GO:0031323,GO:0031325,GO:0031410,GO:0031514,GO:0031638,GO:0031647,GO:0031648,GO:0031904,GO:0031906,GO:0031974,GO:0031982,GO:0031983,GO:0032268,GO:0032270,GO:0032393,GO:0032397,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032838,GO:0032870,GO:0032879,GO:0032940,GO:0032991,GO:0033619,GO:0033993,GO:0034641,GO:0034774,GO:0035239,GO:0035295,GO:0035556,GO:0035770,GO:0036126,GO:0036211,GO:0036230,GO:0036464,GO:0038023,GO:0040012,GO:0040017,GO:0042119,GO:0042127,GO:0042221,GO:0042562,GO:0042592,GO:0042599,GO:0042737,GO:0042981,GO:0042995,GO:0043028,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043129,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043280,GO:0043281,GO:0043299,GO:0043312,GO:0043412,GO:0043603,GO:0043621,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044440,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045321,GO:0045765,GO:0045766,GO:0045862,GO:0046903,GO:0048232,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048609,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0048871,GO:0048875,GO:0048878,GO:0050776,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051270,GO:0051272,GO:0051336,GO:0051345,GO:0051603,GO:0051604,GO:0051704,GO:0051716,GO:0052547,GO:0052548,GO:0060089,GO:0060205,GO:0060249,GO:0060255,GO:0060425,GO:0060429,GO:0060441,GO:0060448,GO:0060541,GO:0060548,GO:0060562,GO:0060600,GO:0061134,GO:0061138,GO:0065007,GO:0065008,GO:0065009,GO:0070011,GO:0070013,GO:0070324,GO:0070371,GO:0070820,GO:0070887,GO:0071310,GO:0071495,GO:0071704,GO:0072001,GO:0080090,GO:0097014,GO:0097066,GO:0097067,GO:0097208,GO:0097223,GO:0097486,GO:0097708,GO:0097729,GO:0098772,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0099568,GO:0101002,GO:0120025,GO:0120038,GO:0140096,GO:1901342,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1904018,GO:1904724,GO:1904813,GO:1990834,GO:1990904,GO:2000026,GO:2000116,GO:2000145,GO:2000147,GO:2001056,GO:2001233,GO:2001235
Exons5
Evalue2.62e-70
EggNOG OGsCOG4870@1|root,KOG1543@2759|Eukaryota
Ec32 ortholog descriptionCathepsin H proteinase
Ec32 orthologEc-01_006960.1
EC3.4.22.16
Descriptioncysteine-type peptidase activity
Cds size447
COG categoryO
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15656.1.1prot_P-wetherbeei_contig15656.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15656 4..1581 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186063.1449559-UTR-P-wetherbeei_contig15656:0..31683186063.1449559-UTR-P-wetherbeei_contig15656:0..3Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15656 1..3 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186063.159792-CDS-P-wetherbeei_contig15656:3..301683186063.159792-CDS-P-wetherbeei_contig15656:3..30Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15656 4..30 +
1683186063.1774464-CDS-P-wetherbeei_contig15656:286..3851683186063.1774464-CDS-P-wetherbeei_contig15656:286..385Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15656 287..385 +
1683186063.1867726-CDS-P-wetherbeei_contig15656:633..7291683186063.1867726-CDS-P-wetherbeei_contig15656:633..729Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15656 634..729 +
1683186063.196362-CDS-P-wetherbeei_contig15656:1011..10711683186063.196362-CDS-P-wetherbeei_contig15656:1011..1071Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15656 1012..1071 +
1683186063.2061214-CDS-P-wetherbeei_contig15656:1416..15811683186063.2061214-CDS-P-wetherbeei_contig15656:1416..1581Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15656 1417..1581 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15656.1.1

>prot_P-wetherbeei_contig15656.1.1 ID=prot_P-wetherbeei_contig15656.1.1|Name=mRNA_P-wetherbeei_contig15656.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp
MVSLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIRYTGGLDTEEAYPYFAK
DNACKYDSLGVGATVQAAVNITYQDENELQAAIAFVGPVSIAFQVTSDFK
SYAGGVYDNPTCGSLPDEVNHAVLAVGYGTDEGGKNGGGDYWIVKNSWG
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mRNA from alignment at P-wetherbeei_contig15656:1..1581+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15656.1.1 ID=mRNA_P-wetherbeei_contig15656.1.1|Name=mRNA_P-wetherbeei_contig15656.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1581bp|location=Sequence derived from alignment at P-wetherbeei_contig15656:1..1581+ (Phaeothamnion wetherbeei SAG_119_79)
GAGATGGTGTCGCTCTCGGAGCAGCAGCTGGTGCGTTTCTTTTTGGGGGC
ATGCGTTCTTTTTTCGGGGCGTTCCCCCGTCTCCGCGCCTCGGGCATGGG
GCGGATCCCGCGTTGGCCCCTGCGCTTAGCAGCGGCTTTGCTTCCTGGCC
TGCTGGTTTTATATTCTATTTGCCACTATGATGTGCCTCTGGAAGTTAAA
CCAGCGGGGAGAAAACTGAAGGCCCGCCCTTTTGGTAATCTCTGCCTGCC
TGCGTGCCCGCCTTGCTGGCGTGGAAAACGGCACAGGTGGATTGCGCCCA
GGATTTCGACAACCACGGCTGCAACGGCGGGCTGCCAAGCCATGCCTTTG
AGTACATTCGCTACACCGGCGGCCTCGACACTGAGGTAAGCCGGGCGGCG
CGCGGAAGAATTTAGGGAATGAGCTGGATGGAAGAGCGGTAGGAGCGGCG
ACCGCGATGGCGGCGGTGGCGACAGGGACGGCGGCAGCGGTGGCCATGGC
GACAGCAGCAGCGACGCCGGCGGCACTAGCGGCGGTAGCGGCCGCGGCGA
CAGCAGTGGCGGTGACAGCGGCGGCGGCGCCGGCAGCGGAATAACCTTCT
CTGCCGGTTCCCGCCTTTTTCTCGACCTTCCAGGAAGCGTACCCGTACTT
CGCGAAGGACAATGCGTGCAAGTATGACAGCCTCGGCGTCGGCGCGACTG
TCCAGGCAGCCGTCAACATCACCTACCAGGTTTGCCGCCGCCTCCAACTA
GTCGTCGGGTTTTTCCTCAGGAGAAAAGAGAAGTGTTCTGAGAACGCATC
TCAAAACCGTCTCTGTTGTTGTTGTCCTTTTCCTTCCATTGGCAGCACCT
TCCCCATGGGCTCGACATCCCTTGGTGGCGTGCTGAAGTCCTCTGCGCGC
CGCCCGCAGCCGTTAGACCTTTGTGCCGCTGGCGCTATACCTGTTTCTGG
CCGGCTGATCTTGTGCTGCCGGCTCTTCACCTGCTTCTGTTTTATTGGTG
CCGTTTTGCAGGACGAGAACGAGCTGCAGGCGGCGATCGCCTTCGTGGGC
CCGGTCAGCATCGCGTTCCAGGTAAGATTCTATTCCCTGCTGTTGCTTGT
AGCGATTTGCAGTGTAGTCTGCTGGCGCTGGAATTCATGATGTGTGTATG
GCATTCCTTGCGGGAGCTTTTTTCTAAATCTTAGAGAAGGGGCCTCTCAA
AAAGATAAAAGAACTCGACCTCGCTTCTTTTGGGGGGTTTCTTCGATGCT
ACAATTCACTGTTGAACAACTTGCGTCAAGATGGGGCCCAACCAACCGAC
GCACAGTCTTACCTTCGCTTGCCCTCTTGTGATCCAGACTCTGTTTCTTC
TGTCCGTTTCCCCGTCTGATTCCTCACTTCTCTGATCGTTTCACTGTCGT
CGGGCGAGGGCTGCAGGTGACGTCGGACTTCAAGTCGTACGCGGGCGGCG
TCTACGACAACCCGACCTGCGGGTCGCTGCCGGACGAGGTCAACCACGCC
GTGCTCGCCGTCGGCTACGGCACGGATGAGGGCGGGAAGAACGGCGGCGG
CGATTACTGGATCGTTAAGAACTCATGGGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15656:1..1581+

>mRNA_P-wetherbeei_contig15656.1.1 ID=mRNA_P-wetherbeei_contig15656.1.1|Name=mRNA_P-wetherbeei_contig15656.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig15656:1..1581+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGTCGCTCTCGGAGCAGCAGCTGGTGGATTGCGCCCAGGATTTCGA
CAACCACGGCTGCAACGGCGGGCTGCCAAGCCATGCCTTTGAGTACATTC
GCTACACCGGCGGCCTCGACACTGAGGAAGCGTACCCGTACTTCGCGAAG
GACAATGCGTGCAAGTATGACAGCCTCGGCGTCGGCGCGACTGTCCAGGC
AGCCGTCAACATCACCTACCAGGACGAGAACGAGCTGCAGGCGGCGATCG
CCTTCGTGGGCCCGGTCAGCATCGCGTTCCAGGTGACGTCGGACTTCAAG
TCGTACGCGGGCGGCGTCTACGACAACCCGACCTGCGGGTCGCTGCCGGA
CGAGGTCAACCACGCCGTGCTCGCCGTCGGCTACGGCACGGATGAGGGCG
GGAAGAACGGCGGCGGCGATTACTGGATCGTTAAGAACTCATGGGGT
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