mRNA_P-wetherbeei_contig15644.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Match: A0A2K8SYG9_9NOSO (CheY chemotaxis protein or a CheY-like REC n=4 Tax=Nostoc TaxID=1177 RepID=A0A2K8SYG9_9NOSO) HSP 1 Score: 193 bits (490), Expect = 2.120e-53 Identity = 114/265 (43.02%), Postives = 167/265 (63.02%), Query Frame = 1
Query: 13 LRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTWDVIISDHRMPRFSGREALEMVQEAGLDIPFIVVSGTMGEETAIEYMKAGARDYLLKGHLKRLAPALRRELHEATIRRSGRDAEEARRESQARYRQIVEAASEGIFMVDTRSRVIFANRRLGEMLGYENERMLGYSIFNFVAAEDVGLARTRWRRRPGKGGEHLELRLVHSDGAMVWTQISMSALKDHQGNWLGTLGMVTDITESKLLQ---ERVLRAE 798
LR L+ ED DAEL + L E RV+T +F ALE++T+D+I++D+ +P F G ALE+ + +PFI VS +GEE AIE +K GA DY+LK L RL P+++R L EA RR + AEE+ ++S+A+YR+IV+ + EGI+M+D++SR F N+RL EMLGY E MLG S+FNF+ D A + +G + E RL DG+ +WT IS A+ + Q ++LG + M+TDIT+ K + +R+L+ E
Sbjct: 4 LRFLLLEDSLLDAELAEATLTEGGINCELIRVETGANFLAALEAETFDLILADYALPSFDGISALEIARNRTPQVPFIFVSAALGEELAIEALKNGATDYVLKQRLGRLVPSVQRALREAKERRERQQAEESLQKSEAKYRRIVDTSYEGIWMIDSQSRTEFVNQRLCEMLGYPAEEMLGRSMFNFIDRVDGVAAEEKLEWHKQEGSDLKEARLRCKDGSYIWTLISARAILNEQNDFLGAIAMLTDITDRKRTESERDRLLQLE 268
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Match: UPI001E289CEE (response regulator n=1 Tax=Nostoc sp. CHAB 5824 TaxID=2780402 RepID=UPI001E289CEE) HSP 1 Score: 192 bits (488), Expect = 4.170e-53 Identity = 118/273 (43.22%), Postives = 171/273 (62.64%), Query Frame = 1
Query: 13 LRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTWDVIISDHRMPRFSGREALEMVQEAGLDIPFIVVSGTMGEETAIEYMKAGARDYLLKGHLKRLAPALRRELHEATIRRSGRDAEEARRESQARYRQIVEAASEGIFMVDTRSRVIFANRRLGEMLGYENERMLGYSIFNFVAAEDVGLARTRWRRRPGKGGEHLELRLVHSDGAMVWTQISMSALKDHQGNWLGTLGMVTDITESK--------LLQ-ERVLRAEIE 804
LR L+ ED DAEL + L + E RV+T DF ALE++T+D+I++D+ +P F G ALE+ + ++PFI VS +GEE AIE +K GA DY+LK L RL P+++R L EA RR + AEE+ ++S+A+YR+IV+ + EGI+M+D++SR F N+RL EMLGY E ML S+F+F+ D A+ + +G + E RL DG+ +WT IS A+ + Q +LG + M+TDIT+ K LLQ E++ RAE E
Sbjct: 4 LRFLLLEDSLLDAELAQAILTDGEINCELVRVETGADFLAALEAETFDLILADYALPSFDGISALEIARNRTPEVPFIFVSAALGEELAIEALKNGATDYVLKQRLGRLVPSVQRALQEAKERRERQQAEESLQKSEAKYRRIVDTSYEGIWMIDSQSRTEFVNQRLCEMLGYTAEEMLSRSLFDFMDQADGIAAQQKLEWLKQEGSDLKEGRLRCKDGSYIWTLISARAILNEQNEFLGAIAMLTDITDRKRTESERDRLLQLEQLARAEAE 276
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Match: UPI0018C6F69B (response regulator n=1 Tax=Nostoc sp. WHI TaxID=2650611 RepID=UPI0018C6F69B) HSP 1 Score: 191 bits (486), Expect = 7.960e-53 Identity = 118/274 (43.07%), Postives = 170/274 (62.04%), Query Frame = 1
Query: 13 LRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTWDVIISDHRMPRFSGREALEMVQEAGLDIPFIVVSGTMGEETAIEYMKAGARDYLLKGHLKRLAPALRRELHEATIRRSGRDAEEARRESQARYRQIVEAASEGIFMVDTRSRVIFANRRLGEMLGYENERMLGYSIFNFV-AAEDVGLARTRWRRRPGKGGEHLELRLVHSDGAMVWTQISMSALKDHQGNWLGTLGMVTDITESK--------LLQ-ERVLRAEIE 804
LR L+ ED DAEL + L E RV+T DF A++ +T+D+I++D+ +P F G ALE+ + ++PFI VS +GEE AIE +K GA DY+LK L RL P+++R L EA RR + AEE+ ++S+A+YR+IV+ + EGI+M+D++SR F N+RL +MLGY E MLG S+FNF+ A+ + W +R +G E E R DG+ +WT IS A+ Q +LG + M+TDIT+ K LLQ E++ RAE E
Sbjct: 4 LRFLLLEDSLLDAELAQAMLTEGGINCELIRVETGADFLAAVKIETFDLILADYALPSFDGISALEIARNHCPEVPFIFVSAALGEELAIEALKNGATDYVLKQRLGRLVPSVQRALREAKERRKRQQAEESLQKSEAKYRRIVDTSYEGIWMIDSQSRTEFVNQRLSQMLGYTAEEMLGCSMFNFMDQADGTAEEKLEWLKR--EGSELKESRFCCKDGSYIWTLISARAIFGEQNEFLGAIAMLTDITDRKQTAEERDRLLQLEKLARAEAE 275
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Match: A0A2R5FR63_NOSCO (Multi-sensor hybrid histidine kinase n=6 Tax=Nostoc TaxID=1177 RepID=A0A2R5FR63_NOSCO) HSP 1 Score: 191 bits (485), Expect = 1.110e-52 Identity = 119/273 (43.59%), Postives = 165/273 (60.44%), Query Frame = 1
Query: 13 LRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTWDVIISDHRMPRFSGREALEMVQEAGLDIPFIVVSGTMGEETAIEYMKAGARDYLLKGHLKRLAPALRRELHEATIRRSGRDAEEARRESQARYRQIVEAASEGIFMVDTRSRVIFANRRLGEMLGYENERMLGYSIFNFVAAEDVGLARTRWRRRPGKGGEHLELRLVHSDGAMVWTQISMSALKDHQGNWLGTLGMVTDITESK--------LLQ-ERVLRAEIE 804
LR L+ ED DAE E RV+T DF ALE++T+D+I++D+ +P F G ALE+ Q +IPFI VS +GEE AIE +K GA DY+LK L RL P+++R L EA RR + AEE+ ++S+A+YR+IV+ + EGI+M+D++SR F N+RL EMLGY E MLG S+F F+ D A + +G + E RL DG+ +WT IS A+ + Q +LG + M+TDIT+ K LLQ E+ RAE E
Sbjct: 4 LRFLLLEDSLLDAEXXXXXXXEGGINCELIRVETGADFLAALEAETFDLILADYALPSFDGISALEIAQNQCPEIPFIFVSAALGEELAIEALKNGATDYVLKQRLGRLVPSVQRALREAKERRERQQAEESLQKSEAKYRRIVDTSYEGIWMIDSQSRTEFVNQRLCEMLGYPPEEMLGRSMFYFIDRVDGVAAEEKLEWHKQEGSDLKEARLRCKDGSYIWTLISARAILNEQNEFLGAIAMLTDITDRKRTESERDRLLQLEQTARAEAE 276
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Match: UPI001866CE12 (response regulator n=3 Tax=Nostocaceae TaxID=1162 RepID=UPI001866CE12) HSP 1 Score: 191 bits (484), Expect = 1.560e-52 Identity = 118/275 (42.91%), Postives = 170/275 (61.82%), Query Frame = 1
Query: 13 LRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTWDVIISDHRMPRFSGREALEMVQEAGLDIPFIVVSGTMGEETAIEYMKAGARDYLLKGHLKRLAPALRRELHEATIRRSGRDAEEARRESQARYRQIVEAASEGIFMVDTRSRVIFANRRLGEMLGYENERMLGYSIFNFVAAED--VGLARTRWRRRPGKGGEHLELRLVHSDGAMVWTQISMSALKDHQGNWLGTLGMVTDITESK--------LLQ-ERVLRAEIE 804
LR L+ ED DAEL+ + L E RV+T DF ALE++ +D+I++D+ +P F G AL++ + D+PFI VS +GEE AIE +K GA DY+LK L RL P+++R L EA R + AE++ ++S+A+YR+IV+ + EGI+M+D+++R F N+RL EMLGY E M G +IF+F+ D V + W R+ +G + E RL DG+ +WT IS A+ QG +LG + M+TDIT+ K LLQ ER RAE E
Sbjct: 4 LRFLLLEDSLLDAELIQAMLTEGGIDCELVRVETSADFLAALETKAFDLILADYALPSFDGISALQIARNRCPDVPFIFVSAALGEELAIEALKNGATDYVLKQRLGRLVPSVQRALREAQERCERQRAEDSLQKSEAKYRRIVDTSYEGIWMIDSQARTEFVNQRLSEMLGYTAEEMFGRAIFDFMDQTDGIVAQQKLEWLRQ--EGNDLKEGRLRCKDGSYIWTLISARAISSEQGEFLGAIAMLTDITDRKRTESERDRLLQLERAARAEAE 276
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Match: UPI001687EE7E (response regulator n=1 Tax=Nostoc flagelliforme TaxID=1306274 RepID=UPI001687EE7E) HSP 1 Score: 191 bits (484), Expect = 1.560e-52 Identity = 115/275 (41.82%), Postives = 170/275 (61.82%), Query Frame = 1
Query: 13 LRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTWDVIISDHRMPRFSGREALEMVQEAGLDIPFIVVSGTMGEETAIEYMKAGARDYLLKGHLKRLAPALRRELHEATIRRSGRDAEEARRESQARYRQIVEAASEGIFMVDTRSRVIFANRRLGEMLGYENERMLGYSIFNFVAAED--VGLARTRWRRRPGKGGEHLELRLVHSDGAMVWTQISMSALKDHQGNWLGTLGMVTDITESK--------LLQ-ERVLRAEIE 804
LR L+ ED DAEL + L + E RV+T DF ALE++T+D+I++D+ +P F G ALE+ + ++PFI VS +GEE AIE +K GA DY+LK L+RL P+++R L EA RR + AEE+ ++S+A+YR+IV+ + EGI+M+D ++ F N+R+ +MLGY E MLG SIF+F+ D + W +R + E RL DG+ +WT +S A+ D Q +LG + M+TDI++ K LLQ E++ RAE E
Sbjct: 4 LRFLLLEDSALDAELTEAMLTEGEINYELIRVETGADFLAALETETFDLILADYALPSFDGISALEIARNYCPEVPFIFVSAALGEELAIEALKNGATDYVLKQRLERLVPSVQRALREAKERRERKQAEESLQKSEAKYRRIVDTSYEGIWMIDQEAQTEFVNQRMSQMLGYPAEEMLGRSIFDFIDRTDGITDEEKLEWLKRENNNLK--EARLCCKDGSYIWTLVSARAIFDEQNEFLGAIAMLTDISDRKRTESERDRLLQLEQLARAEAE 276
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Match: A0A235I7B0_9NOSO (Uncharacterized protein n=6 Tax=Nostocales TaxID=1161 RepID=A0A235I7B0_9NOSO) HSP 1 Score: 190 bits (482), Expect = 3.020e-52 Identity = 115/267 (43.07%), Postives = 172/267 (64.42%), Query Frame = 1
Query: 13 LRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTWDVIISDHRMPRFSGREALEMVQEAGLDIPFIVVSGTMGEETAIEYMKAGARDYLLKGHLKRLAPALRRELHEATIRRSGRDAEEARRESQARYRQIVEAASEGIFMVDTRSRVIFANRRLGEMLGYENERMLGYSIFNFV-AAEDV-GLARTRWRRRPGKGGEHLELRLVHSDGAMVWTQISMSALKDHQGNWLGTLGMVTDITESKLLQ---ERVLRAE 798
LR L+ ED DAEL L E RV+T DF ALE++T+D+I++D+ +P F+G ALE+ + ++PFI VS +GEE AIE +K GA DY+LK L RL P+++R L EA RR + AEE+ ++S+A+YR+IV+ + EGI+M+D+++R F N+R+ +MLGY MLG SIF+F+ A+D+ G A+ W + G+ + E RL DG+ +WT IS A+ + QG LG + M+TDIT+ K + +R+L+ E
Sbjct: 4 LRFLLLEDSLLDAELAQMILTEGGINCELIRVETSADFLAALETETFDLILADYALPSFNGILALEIARNRTPEVPFIFVSAVLGEELAIEALKNGATDYVLKQRLGRLVPSVQRALREAKERRERKQAEESLQKSEAKYRRIVDTSYEGIWMIDSQTRTEFVNQRISQMLGYPAAEMLGRSIFDFMDRADDIAGEAKLEWFK--GEESDLKEGRLRCQDGSYIWTLISARAILNEQGECLGAIAMLTDITDRKRTESERDRLLQLE 268
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Match: A0A2V8RER0_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8RER0_9BACT) HSP 1 Score: 178 bits (452), Expect = 4.180e-52 Identity = 92/206 (44.66%), Postives = 135/206 (65.53%), Query Frame = 1
Query: 1 LQRPLRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTWDVIISDHRMPRFSGREALEMVQEAGLDIPFIVVSGTMGEETAIEYMKAGARDYLLKGHLKRLAPALRRELHEATIRRSGRDAEEARRESQARYRQIVEAASEGIFMVDTRSRVIFANRRLGEMLGYENERMLGYSIFNFVAAEDVGLARTRWRRR 618
+ + LR+L ED E DA LL YL Y + + RVQT + ALES+ WDV++ D+ MP F+ AL +++E LD+PFI++SGT+GE A+E M+AGA DYL+K +L RL P + RELHEA RR+ R AE R+++A+YR++++ + EG+++ D R+ + N RL EML E M+G+S+ +F+ AE RWRRR
Sbjct: 1 MNKTLRVLHVEDSEKDAALLTRYLTRAGYTLTSERVQTAAAMKAALESREWDVVLCDYSMPHFNAVTALAVLKETALDLPFIIISGTVGESVAVEAMRAGAHDYLMKDNLVRLGPTIERELHEADNRRARRQAETKLRKTEAQYRRLLDTSYEGVWVFDAELRITYVNERLAEMLRVRPEEMIGHSVTDFLDAEARADVEQRWRRR 206
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Match: A0A8J7D8N7_9CYAN (Response regulator n=1 Tax=aff. Roholtiella sp. LEGE 12411 TaxID=1828822 RepID=A0A8J7D8N7_9CYAN) HSP 1 Score: 188 bits (478), Expect = 1.120e-51 Identity = 117/273 (42.86%), Postives = 168/273 (61.54%), Query Frame = 1
Query: 13 LRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTWDVIISDHRMPRFSGREALEMVQEAGLDIPFIVVSGTMGEETAIEYMKAGARDYLLKGHLKRLAPALRRELHEATIRRSGRDAEEARRESQARYRQIVEAASEGIFMVDTRSRVIFANRRLGEMLGYENERMLGYSIFNFVAAEDVGLARTRWRRRPGKGGEHLELRLVHSDGAMVWTQISMSALKDHQGNWLGTLGMVTDITESK--------LLQ-ERVLRAEIE 804
LR L+ ED DAEL + L + RV+T DF ALE++ +D+I++D+ +P F G ALE+ + D+PFI VSG +GEE AIE +K GA DY+LK L RL P+++R L EA R + AEE+ ++S+ARYR+IV+ + EGI+M+D+++R F N+R+ EMLGY E M G SIF+F+ D A+ + +G + E +L DG+ +WT IS A+ QG +LG + M+TDIT+ K LLQ E+ RAE E
Sbjct: 4 LRFLLLEDSLLDAELTEAMLTEGGIDCKLLRVETSADFLAALETKAFDLILADYALPSFDGISALEIARNRCPDVPFIFVSGALGEELAIEALKNGATDYVLKQRLGRLVPSVQRALREAQERCERQRAEESLQKSEARYRRIVDTSYEGIWMIDSQTRTEFVNQRMFEMLGYTAEEMFGRSIFDFMDQADGIAAQQKLEWLKQQGNDLKEGKLRCKDGSYIWTLISARAIWSEQGEFLGAIAMLTDITDRKRTESERDRLLQLEQTARAEAE 276
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Match: A0A3M1EMC1_9CHLR (PAS domain S-box protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1EMC1_9CHLR) HSP 1 Score: 184 bits (468), Expect = 1.990e-51 Identity = 117/278 (42.09%), Postives = 162/278 (58.27%), Query Frame = 1
Query: 7 RPLRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTWDVIISDHRMPRFSGREALEMVQEAGLDIPFIVVSGTMGEETAIEYMKAGARDYLLKGHLKRLAPALRRELHEATIRRSGRDAEEARRESQARYRQIVEAASEGIFMVDTRSRVIFANRRLGEMLGYENERMLGYSIFN----FVAAEDVGLARTRWRRRPGKGGEHLELRLVHSDGAMVWTQISMSALKDHQGNWLGTLGMVTDITESKLLQERVLRAEIEKKLFCRQV 828
+P+R+L+ ED DA+LLV L +QVE RRV ++ AL WDV++SD+ +P F G AL V+ DIPFI++SG +GEE A+E MKAGA+DY+LK L RL PALRREL EA RR+ R AE A RES+ARYR + E G++ D R++FAN L +LG+E+ L + N +V E+ R RR G G +E RL DG+ +W A+KD G L G + DIT+ K +E++ A EK++ R++
Sbjct: 14 QPIRVLLVEDSAVDADLLVRELRRAGFQVEWRRVVSQAAVEEALREADWDVVVSDYVLPGFDGLRALATVRAIDEDIPFILISGEVGEEIAVEAMKAGAQDYVLKDKLTRLGPALRRELREAEGRRARRQAEAALRESEARYRALTERLPVGVYRTDIEGRILFANPALAHILGFESVEALMETEPNALSFYVDPEERAHVLERLRR--GSGLLKVEQRLRRRDGSEIWVWDIQQAVKDESGEVLYLEGTLEDITDRKRAEEQLRTALREKEVLLREL 289 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15644.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15644.1.1 >prot_P-wetherbeei_contig15644.1.1 ID=prot_P-wetherbeei_contig15644.1.1|Name=mRNA_P-wetherbeei_contig15644.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp LQRPLRLLIAEDDEGDAELLVSYLEFEKYQVEARRVQTREDFRIALESQTback to top mRNA from alignment at P-wetherbeei_contig15644:91..933- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15644.1.1 ID=mRNA_P-wetherbeei_contig15644.1.1|Name=mRNA_P-wetherbeei_contig15644.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig15644:91..933- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15644:91..933- >mRNA_P-wetherbeei_contig15644.1.1 ID=mRNA_P-wetherbeei_contig15644.1.1|Name=mRNA_P-wetherbeei_contig15644.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig15644:91..933- (Phaeothamnion wetherbeei SAG_119_79)back to top |