mRNA_P-wetherbeei_contig15608.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A250XQ43_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XQ43_9CHLO) HSP 1 Score: 273 bits (697), Expect = 1.670e-83 Identity = 133/265 (50.19%), Postives = 183/265 (69.06%), Query Frame = 1
Query: 1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
DG+ A+LTCAT GK+ +HNPH +++ + I FLNINK+I ++ AG L G DVL +GTPSNL YDVE N DVF+KDV DGV+ ++VG+ ++P+ VGGN SIQ F+ +G E FWTVTGDNV A+ FCD+DGDG +EL+VGSDDF++R+F+ E+VV E++EAD++ L P T++GY L NGTVG+Y+R R+WR K++H+V A++SFD+DGDG ELI G+ +G + R A TG+V
Sbjct: 25 DGKHAALTCATVAGKIFVHNPHQQSV--------SDSNITFLNINKQICSVVAGQLLQ--GSNRDVLFVGTPSNLQCYDVENNKDVFFKDVSDGVNTIVVGQFGDIDQPVVIVGGNCSIQAFDAKGTEKFWTVTGDNVSAMTFCDVDGDGKSELLVGSDDFDIRIFQNEDVVAEVSEADQILALAPV-----------HLTKFGYALVNGTVGLYDRLDRIWRVKSKHSVCALSSFDLDGDGYPELISGWSNGRVEVRRADTGDV 268
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A7S3VM43_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VM43_DUNTE) HSP 1 Score: 271 bits (694), Expect = 8.200e-83 Identity = 137/263 (52.09%), Postives = 179/263 (68.06%), Query Frame = 1
Query: 1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATG 789
DG+ SL CAT GKV IHNPH +++ A I +LNINKRIT+L AGNLA T +A DVLL+GT ++L YDV+ N D+F+KD+ DG SA+ +G ++ PLAFVGGN S+QGF+ +G E FWTVTGDNV A+ F D+DGDG ELVVG+DD ++RV++ E+VV E EADR L P + +GYGL NGT+GVY+R RVWR K++H V A++S+D+DGDGV ELICG+ +G + R TG
Sbjct: 24 DGQHTSLACATLAGKVFIHNPHQQSV--------ADSNISYLNINKRITSLAAGNLAPTRADAKDVLLVGTSTSLQCYDVDSNKDLFFKDLSDGASAIKIGVFSSNDRPLAFVGGNCSLQGFDSKGNERFWTVTGDNVSAMFFADVDGDGRQELVVGTDDCDLRVYRNEDVVAEAAEADRFVALCPL-----------DFSYFGYGLVNGTLGVYDRMDRVWRVKSKHNVCAISSYDLDGDGVPELICGWSNGRVEVRQRDTG 267
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A7S0T4B9_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T4B9_9CHLO) HSP 1 Score: 258 bits (659), Expect = 1.290e-82 Identity = 132/265 (49.81%), Postives = 178/265 (67.17%), Query Frame = 1
Query: 1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
DG+ LT ATSGGK+ IHNP+ + D +++LNINK+I+A+ G L DVLL+GT ++L+AYDV++N D F+KDVPDGV+A++ G+ + P+A VGGN SIQGF+ +G E FWTVTGDNV A+A D++GDG EL+VGSDDFE+RVF+ EEV+ E+TEA+RV L P A R+GY L NGTVGVY+ R WR K+++ VTA +FD+DGDGV E++ G+ SG L R +GE+
Sbjct: 26 DGKHPCLTAATSGGKIFIHNPYQQEADGS--------NLKYLNINKKISAVSHGELDPASKR--DVLLVGTNTDLLAYDVDENKDHFFKDVPDGVNAMLCGRFGQQDAPMAVVGGNCSIQGFDMDGEEGFWTVTGDNVHAMALADVNGDGRNELLVGSDDFEIRVFQNEEVISEVTEAERVVGLAPI-----------QAHRFGYALGNGTVGVYDGTARQWRVKSKNQVTAFCAFDLDGDGVPEVVTGWSSGKLEVRREGSGEM 269
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: UPI00138FA57C (Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FA57C) HSP 1 Score: 259 bits (663), Expect = 2.960e-82 Identity = 132/265 (49.81%), Postives = 180/265 (67.92%), Query Frame = 1
Query: 1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
DG+ LT AT+ GKV IHNPH ++ A I LNIN+++TA+ G L T + D+L +GTP+N++AYDVE N D+FYKDV DGV+A++VGK + PLA GGN SIQGF+ +G + FWTVTGDNV +LA CD +GDG EL+VGS+DF++RVFK++E++ E+TE + VT L P G +++GY L+NGTVGVY+R R WR K+++ A+ SFDID DGV ELI G+ +G + AR+ +GEV
Sbjct: 25 DGQHPCLTGATTAGKVFIHNPHTTSLKGGRASASTDNDISILNINQQVTAVATGPLTMT---SCDILFVGTPTNMLAYDVENNSDLFYKDVADGVNAILVGKLGGYDLPLALAGGNCSIQGFDCDGNDEFWTVTGDNVCSLALCDFNGDGHNELLVGSEDFDIRVFKEDEIIAEMTETEAVTSLCPLRG-----------SKFGYALSNGTVGVYDRTARYWRIKSKNHAIAINSFDIDSDGVPELITGWSNGKIDARSDRSGEV 275
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: UPI00077A8863 (Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A8863) HSP 1 Score: 268 bits (684), Expect = 3.410e-82 Identity = 136/265 (51.32%), Postives = 179/265 (67.55%), Query Frame = 1
Query: 1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
DGR LT AT+ GKV IHNPH A+ AV I LNIN++++A+ AG L +G D LLIGTP+N +AYDVE N D+FYKDV DG ++++ G+ E PLA VGGN SIQGF+ EG + FWTVTGDNV +LA CD GDG EL+VGS+DF++RVFK++E++ E+TE + VT L P G +++GY LANGTVGVY+R R WR K+++ ++ SFD+D DGV ELI G+ +G + AR+ TGEV
Sbjct: 25 DGRHPCLTGATTAGKVFIHNPHSSALQGGRAVASHSNDISILNINQQVSAVAAGQLNDSG---CDTLLIGTPTNFLAYDVENNSDLFYKDVADGANSIVTGRLGSLENPLAIVGGNCSIQGFDFEGNDEFWTVTGDNVCSLAMCDFSGDGTLELLVGSEDFDIRVFKEDEIIAEMTETESVTSLCPLHG-----------SKFGYALANGTVGVYDRTARYWRIKSKNQAMSIHSFDLDSDGVPELITGWSNGKIDARSDRTGEV 275
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A2K3DMF6_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DMF6_CHLRE) HSP 1 Score: 269 bits (688), Expect = 4.450e-82 Identity = 141/265 (53.21%), Postives = 179/265 (67.55%), Query Frame = 1
Query: 1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
DG+ SL CAT GGKV +H PH + + G I +LNINK+I+A+ AG LA DVLL+GTPSNL YDVE N D+FYKDV DGV+ +VG SE PLA VGGN SIQGF +G+E FWTVTGDNV A+AFCD+D DG EL+VGSDDF+VR+F E+V+ E+ EAD+ L G +R+GY L NGT+G+Y+R RVWR K++H+V A+AS+D+DGDG+ ELI G+ +G + R A TGEV
Sbjct: 25 DGQVPSLACATVGGKVFLHQPHHQGV-------GNDNQISYLNINKQISAVVAGRLAGN----KDVLLVGTPSNLQCYDVELNRDLFYKDVNDGVNVCVVGPFGNSEGPLAIVGGNCSIQGFGADGSEKFWTVTGDNVSAMAFCDVDQDGRNELLVGSDDFDVRIFVGEDVIAEVPEADQFVALAAVVG-----------SRFGYALVNGTIGMYDRLDRVWRVKSKHSVCAIASYDLDGDGLPELISGWSNGRMEVRRADTGEV 267
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A2B4RD87_STYPI (Bardet-Biedl syndrome 2 protein homolog n=4 Tax=Scleractinia TaxID=6125 RepID=A0A2B4RD87_STYPI) HSP 1 Score: 268 bits (686), Expect = 9.900e-82 Identity = 133/265 (50.19%), Postives = 179/265 (67.55%), Query Frame = 1
Query: 1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
DGR LT T+ GKV IHNPH A+ A+ I LNIN++++A+ AG L +TG D LL+GTP+N +AYDVE N D+FYKD+ DG + ++ G+ E PLA VGGN SIQGF+ EG + FWTVTGDNV +LA CD +GDG+AEL+VGS+DF++RVFK++E++ E+TE + VT L P G +R+GY L NGTVGVY++ R WR K+++ + SFD+D DGV ELI G+ +G + AR+ TGEV
Sbjct: 25 DGRHPCLTAGTTAGKVFIHNPHSSALQGGRAIASHDNDISILNINQQVSAVAAGPLNSTG---CDTLLVGTPTNFLAYDVENNSDLFYKDIADGANVIVTGRLGSFENPLAIVGGNCSIQGFDFEGNDEFWTVTGDNVCSLAMCDFNGDGLAELLVGSEDFDIRVFKEDEIIAEMTETESVTSLCPIRG-----------SRFGYALGNGTVGVYDKTARYWRIKSKNQAITIHSFDLDSDGVPELITGWSNGKIDARSDRTGEV 275
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A7S1G4Y1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4Y1_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.090e-81 Identity = 139/277 (50.18%), Postives = 175/277 (63.18%), Query Frame = 1
Query: 1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGA------------QKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
DG+ SLTC TS GKV IH+PH+R PA GA + IRFLNIN+++TAL +G L G D L +GT +NL+AY+ E N D+F+KDVPDGVS ++ GK E PL VGGN SIQGF+ G E FWTVTGDNV A+AFCD DGDG EL+VGSDDFE+R+F+ E+VV E TE +++ L P T++GY LANGTVGVY R R+WR K++ V + SFD+D DG EL+ G+ SG RN GE+
Sbjct: 25 DGKHPSLTCGTSAGKVFIHSPHNR---EAPAAGGAGGSAYAAGTDPKNQDIRFLNINRKVTALTSGRLQVDGD--GDTLCVGTQTNLLAYNTEDNSDLFFKDVPDGVSTLLFGKVQTIEAPLVVVGGNCSIQGFDAAGLELFWTVTGDNVSAMAFCDADGDGNNELLVGSDDFEIRIFRNEDVVSEATETEKIVDLCPI-----------HLTKYGYALANGTVGVYNRASRIWRVKSKTPVNCIGSFDLDADGAPELLAGWQSGKFEVRNDVNGEL 285
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: UPI001B88DF7C (Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DF7C) HSP 1 Score: 266 bits (679), Expect = 1.830e-80 Identity = 133/265 (50.19%), Postives = 183/265 (69.06%), Query Frame = 1
Query: 1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
DG SL+CAT+ GKV+IHNPH+R + A+ I LNIN+++T++ AG L G A DVL++GT +N++AYDVE N D+FYKD PDG +A+IVGK E PLA +GGN SIQGF++ G +SFWTVTGDNV +LA D + DG EL+VGS+DF++R+F+++E++ EITE + +T L P TR+GY LANGTVGVY+R R WR K+++ ++ SFD+D DGV EL+ G+ +G + AR+ TGEV
Sbjct: 25 DGTNPSLSCATTAGKVIIHNPHNRGQNTGRMSLSAEGDISLLNINQQVTSVCAGVL--DGNAAKDVLVVGTQTNVLAYDVENNSDLFYKDTPDGSNAIIVGKLGSIETPLAIIGGNCSIQGFDKGGNDSFWTVTGDNVCSLAMLDFNADGQNELIVGSEDFDIRIFREDEIIAEITETEAITSLCPMRN-----------TRFGYALANGTVGVYDRTSRYWRIKSKNYAVSILSFDLDSDGVPELVTGWSNGKIDARSDRTGEV 276
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A7S1IWS5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IWS5_9EUGL) HSP 1 Score: 263 bits (672), Expect = 1.180e-79 Identity = 136/267 (50.94%), Postives = 181/267 (67.79%), Query Frame = 1
Query: 1 DGRQASLTCATSGGKVLIHNPHDRA--MDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
+G Q LTCAT+GGKV IHNPH+R QP+ AQK I++LNIN+ +TAL +G L D+LL+GT +NL+AYDVE+N DVFY++VPDG++++ GK E+ LA VGGN SIQGF+ +G E FWTVTGDNV ALA D+D D EL+VGS+D+E+R+F+ EEV+ E TE DR+ L P G TR+GY L NGT+G+Y+R RVWR K++H V + +D+D DGV ELI G+ +G + R+ GEV
Sbjct: 30 NGEQPCLTCATAGGKVFIHNPHERGDLTVEQPSAD-AQKNIKYLNINRTVTALASGPLNPKSKN--DILLVGTQTNLLAYDVEQNKDVFYREVPDGINSMTFGKVGSIEDQLAIVGGNCSIQGFDADGNELFWTVTGDNVTALALIDIDEDQQNELLVGSEDYEIRIFQNEEVISETTETDRLLALSPLYG-----------TRFGYALGNGTIGIYDRATRVWRFKSKHQVVCVDGYDLDADGVPELISGWHNGKVEVRSDKNGEV 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15608.1.1 >prot_P-wetherbeei_contig15608.1.1 ID=prot_P-wetherbeei_contig15608.1.1|Name=mRNA_P-wetherbeei_contig15608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITAback to top mRNA from alignment at P-wetherbeei_contig15608:30..1543- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15608.1.1 ID=mRNA_P-wetherbeei_contig15608.1.1|Name=mRNA_P-wetherbeei_contig15608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1514bp|location=Sequence derived from alignment at P-wetherbeei_contig15608:30..1543- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15608:30..1543- >mRNA_P-wetherbeei_contig15608.1.1 ID=mRNA_P-wetherbeei_contig15608.1.1|Name=mRNA_P-wetherbeei_contig15608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig15608:30..1543- (Phaeothamnion wetherbeei SAG_119_79)back to top |