mRNA_P-wetherbeei_contig15608.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15608.1.1
Unique NamemRNA_P-wetherbeei_contig15608.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A250XQ43_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XQ43_9CHLO)

HSP 1 Score: 273 bits (697), Expect = 1.670e-83
Identity = 133/265 (50.19%), Postives = 183/265 (69.06%), Query Frame = 1
Query:    1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
            DG+ A+LTCAT  GK+ +HNPH +++        +   I FLNINK+I ++ AG L    G   DVL +GTPSNL  YDVE N DVF+KDV DGV+ ++VG+    ++P+  VGGN SIQ F+ +G E FWTVTGDNV A+ FCD+DGDG +EL+VGSDDF++R+F+ E+VV E++EAD++  L P              T++GY L NGTVG+Y+R  R+WR K++H+V A++SFD+DGDG  ELI G+ +G +  R A TG+V
Sbjct:   25 DGKHAALTCATVAGKIFVHNPHQQSV--------SDSNITFLNINKQICSVVAGQLLQ--GSNRDVLFVGTPSNLQCYDVENNKDVFFKDVSDGVNTIVVGQFGDIDQPVVIVGGNCSIQAFDAKGTEKFWTVTGDNVSAMTFCDVDGDGKSELLVGSDDFDIRIFQNEDVVAEVSEADQILALAPV-----------HLTKFGYALVNGTVGLYDRLDRIWRVKSKHSVCALSSFDLDGDGYPELISGWSNGRVEVRRADTGDV 268          
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A7S3VM43_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VM43_DUNTE)

HSP 1 Score: 271 bits (694), Expect = 8.200e-83
Identity = 137/263 (52.09%), Postives = 179/263 (68.06%), Query Frame = 1
Query:    1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATG 789
            DG+  SL CAT  GKV IHNPH +++        A   I +LNINKRIT+L AGNLA T  +A DVLL+GT ++L  YDV+ N D+F+KD+ DG SA+ +G    ++ PLAFVGGN S+QGF+ +G E FWTVTGDNV A+ F D+DGDG  ELVVG+DD ++RV++ E+VV E  EADR   L P              + +GYGL NGT+GVY+R  RVWR K++H V A++S+D+DGDGV ELICG+ +G +  R   TG
Sbjct:   24 DGQHTSLACATLAGKVFIHNPHQQSV--------ADSNISYLNINKRITSLAAGNLAPTRADAKDVLLVGTSTSLQCYDVDSNKDLFFKDLSDGASAIKIGVFSSNDRPLAFVGGNCSLQGFDSKGNERFWTVTGDNVSAMFFADVDGDGRQELVVGTDDCDLRVYRNEDVVAEAAEADRFVALCPL-----------DFSYFGYGLVNGTLGVYDRMDRVWRVKSKHNVCAISSYDLDGDGVPELICGWSNGRVEVRQRDTG 267          
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A7S0T4B9_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T4B9_9CHLO)

HSP 1 Score: 258 bits (659), Expect = 1.290e-82
Identity = 132/265 (49.81%), Postives = 178/265 (67.17%), Query Frame = 1
Query:    1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
            DG+   LT ATSGGK+ IHNP+ +  D           +++LNINK+I+A+  G L        DVLL+GT ++L+AYDV++N D F+KDVPDGV+A++ G+    + P+A VGGN SIQGF+ +G E FWTVTGDNV A+A  D++GDG  EL+VGSDDFE+RVF+ EEV+ E+TEA+RV  L P             A R+GY L NGTVGVY+   R WR K+++ VTA  +FD+DGDGV E++ G+ SG L  R   +GE+
Sbjct:   26 DGKHPCLTAATSGGKIFIHNPYQQEADGS--------NLKYLNINKKISAVSHGELDPASKR--DVLLVGTNTDLLAYDVDENKDHFFKDVPDGVNAMLCGRFGQQDAPMAVVGGNCSIQGFDMDGEEGFWTVTGDNVHAMALADVNGDGRNELLVGSDDFEIRVFQNEEVISEVTEAERVVGLAPI-----------QAHRFGYALGNGTVGVYDGTARQWRVKSKNQVTAFCAFDLDGDGVPEVVTGWSSGKLEVRREGSGEM 269          
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: UPI00138FA57C (Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FA57C)

HSP 1 Score: 259 bits (663), Expect = 2.960e-82
Identity = 132/265 (49.81%), Postives = 180/265 (67.92%), Query Frame = 1
Query:    1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
            DG+   LT AT+ GKV IHNPH  ++    A       I  LNIN+++TA+  G L  T   + D+L +GTP+N++AYDVE N D+FYKDV DGV+A++VGK    + PLA  GGN SIQGF+ +G + FWTVTGDNV +LA CD +GDG  EL+VGS+DF++RVFK++E++ E+TE + VT L P  G           +++GY L+NGTVGVY+R  R WR K+++   A+ SFDID DGV ELI G+ +G + AR+  +GEV
Sbjct:   25 DGQHPCLTGATTAGKVFIHNPHTTSLKGGRASASTDNDISILNINQQVTAVATGPLTMT---SCDILFVGTPTNMLAYDVENNSDLFYKDVADGVNAILVGKLGGYDLPLALAGGNCSIQGFDCDGNDEFWTVTGDNVCSLALCDFNGDGHNELLVGSEDFDIRVFKEDEIIAEMTETEAVTSLCPLRG-----------SKFGYALSNGTVGVYDRTARYWRIKSKNHAIAINSFDIDSDGVPELITGWSNGKIDARSDRSGEV 275          
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: UPI00077A8863 (Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A8863)

HSP 1 Score: 268 bits (684), Expect = 3.410e-82
Identity = 136/265 (51.32%), Postives = 179/265 (67.55%), Query Frame = 1
Query:    1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
            DGR   LT AT+ GKV IHNPH  A+    AV      I  LNIN++++A+ AG L  +G    D LLIGTP+N +AYDVE N D+FYKDV DG ++++ G+    E PLA VGGN SIQGF+ EG + FWTVTGDNV +LA CD  GDG  EL+VGS+DF++RVFK++E++ E+TE + VT L P  G           +++GY LANGTVGVY+R  R WR K+++   ++ SFD+D DGV ELI G+ +G + AR+  TGEV
Sbjct:   25 DGRHPCLTGATTAGKVFIHNPHSSALQGGRAVASHSNDISILNINQQVSAVAAGQLNDSG---CDTLLIGTPTNFLAYDVENNSDLFYKDVADGANSIVTGRLGSLENPLAIVGGNCSIQGFDFEGNDEFWTVTGDNVCSLAMCDFSGDGTLELLVGSEDFDIRVFKEDEIIAEMTETESVTSLCPLHG-----------SKFGYALANGTVGVYDRTARYWRIKSKNQAMSIHSFDLDSDGVPELITGWSNGKIDARSDRTGEV 275          
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A2K3DMF6_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DMF6_CHLRE)

HSP 1 Score: 269 bits (688), Expect = 4.450e-82
Identity = 141/265 (53.21%), Postives = 179/265 (67.55%), Query Frame = 1
Query:    1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
            DG+  SL CAT GGKV +H PH + +       G    I +LNINK+I+A+ AG LA       DVLL+GTPSNL  YDVE N D+FYKDV DGV+  +VG    SE PLA VGGN SIQGF  +G+E FWTVTGDNV A+AFCD+D DG  EL+VGSDDF+VR+F  E+V+ E+ EAD+   L    G           +R+GY L NGT+G+Y+R  RVWR K++H+V A+AS+D+DGDG+ ELI G+ +G +  R A TGEV
Sbjct:   25 DGQVPSLACATVGGKVFLHQPHHQGV-------GNDNQISYLNINKQISAVVAGRLAGN----KDVLLVGTPSNLQCYDVELNRDLFYKDVNDGVNVCVVGPFGNSEGPLAIVGGNCSIQGFGADGSEKFWTVTGDNVSAMAFCDVDQDGRNELLVGSDDFDVRIFVGEDVIAEVPEADQFVALAAVVG-----------SRFGYALVNGTIGMYDRLDRVWRVKSKHSVCAIASYDLDGDGLPELISGWSNGRMEVRRADTGEV 267          
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A2B4RD87_STYPI (Bardet-Biedl syndrome 2 protein homolog n=4 Tax=Scleractinia TaxID=6125 RepID=A0A2B4RD87_STYPI)

HSP 1 Score: 268 bits (686), Expect = 9.900e-82
Identity = 133/265 (50.19%), Postives = 179/265 (67.55%), Query Frame = 1
Query:    1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
            DGR   LT  T+ GKV IHNPH  A+    A+      I  LNIN++++A+ AG L +TG    D LL+GTP+N +AYDVE N D+FYKD+ DG + ++ G+    E PLA VGGN SIQGF+ EG + FWTVTGDNV +LA CD +GDG+AEL+VGS+DF++RVFK++E++ E+TE + VT L P  G           +R+GY L NGTVGVY++  R WR K+++    + SFD+D DGV ELI G+ +G + AR+  TGEV
Sbjct:   25 DGRHPCLTAGTTAGKVFIHNPHSSALQGGRAIASHDNDISILNINQQVSAVAAGPLNSTG---CDTLLVGTPTNFLAYDVENNSDLFYKDIADGANVIVTGRLGSFENPLAIVGGNCSIQGFDFEGNDEFWTVTGDNVCSLAMCDFNGDGLAELLVGSEDFDIRVFKEDEIIAEMTETESVTSLCPIRG-----------SRFGYALGNGTVGVYDKTARYWRIKSKNQAITIHSFDLDSDGVPELITGWSNGKIDARSDRTGEV 275          
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A7S1G4Y1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4Y1_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.090e-81
Identity = 139/277 (50.18%), Postives = 175/277 (63.18%), Query Frame = 1
Query:    1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGA------------QKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
            DG+  SLTC TS GKV IH+PH+R     PA  GA             + IRFLNIN+++TAL +G L   G    D L +GT +NL+AY+ E N D+F+KDVPDGVS ++ GK    E PL  VGGN SIQGF+  G E FWTVTGDNV A+AFCD DGDG  EL+VGSDDFE+R+F+ E+VV E TE +++  L P              T++GY LANGTVGVY R  R+WR K++  V  + SFD+D DG  EL+ G+ SG    RN   GE+
Sbjct:   25 DGKHPSLTCGTSAGKVFIHSPHNR---EAPAAGGAGGSAYAAGTDPKNQDIRFLNINRKVTALTSGRLQVDGD--GDTLCVGTQTNLLAYNTEDNSDLFFKDVPDGVSTLLFGKVQTIEAPLVVVGGNCSIQGFDAAGLELFWTVTGDNVSAMAFCDADGDGNNELLVGSDDFEIRIFRNEDVVSEATETEKIVDLCPI-----------HLTKYGYALANGTVGVYNRASRIWRVKSKTPVNCIGSFDLDADGAPELLAGWQSGKFEVRNDVNGEL 285          
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: UPI001B88DF7C (Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DF7C)

HSP 1 Score: 266 bits (679), Expect = 1.830e-80
Identity = 133/265 (50.19%), Postives = 183/265 (69.06%), Query Frame = 1
Query:    1 DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
            DG   SL+CAT+ GKV+IHNPH+R  +       A+  I  LNIN+++T++ AG L   G  A DVL++GT +N++AYDVE N D+FYKD PDG +A+IVGK    E PLA +GGN SIQGF++ G +SFWTVTGDNV +LA  D + DG  EL+VGS+DF++R+F+++E++ EITE + +T L P              TR+GY LANGTVGVY+R  R WR K+++   ++ SFD+D DGV EL+ G+ +G + AR+  TGEV
Sbjct:   25 DGTNPSLSCATTAGKVIIHNPHNRGQNTGRMSLSAEGDISLLNINQQVTSVCAGVL--DGNAAKDVLVVGTQTNVLAYDVENNSDLFYKDTPDGSNAIIVGKLGSIETPLAIIGGNCSIQGFDKGGNDSFWTVTGDNVCSLAMLDFNADGQNELIVGSEDFDIRIFREDEIIAEITETEAITSLCPMRN-----------TRFGYALANGTVGVYDRTSRYWRIKSKNYAVSILSFDLDSDGVPELVTGWSNGKIDARSDRTGEV 276          
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Match: A0A7S1IWS5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IWS5_9EUGL)

HSP 1 Score: 263 bits (672), Expect = 1.180e-79
Identity = 136/267 (50.94%), Postives = 181/267 (67.79%), Query Frame = 1
Query:    1 DGRQASLTCATSGGKVLIHNPHDRA--MDHQPAVPGAQKGIRFLNINKRITALRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIVGKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDGVAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPATRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGFDSGSLVARNAATGEV 795
            +G Q  LTCAT+GGKV IHNPH+R      QP+   AQK I++LNIN+ +TAL +G L        D+LL+GT +NL+AYDVE+N DVFY++VPDG++++  GK    E+ LA VGGN SIQGF+ +G E FWTVTGDNV ALA  D+D D   EL+VGS+D+E+R+F+ EEV+ E TE DR+  L P  G           TR+GY L NGT+G+Y+R  RVWR K++H V  +  +D+D DGV ELI G+ +G +  R+   GEV
Sbjct:   30 NGEQPCLTCATAGGKVFIHNPHERGDLTVEQPSAD-AQKNIKYLNINRTVTALASGPLNPKSKN--DILLVGTQTNLLAYDVEQNKDVFYREVPDGINSMTFGKVGSIEDQLAIVGGNCSIQGFDADGNELFWTVTGDNVTALALIDIDEDQQNELLVGSEDYEIRIFQNEEVISETTETDRLLALSPLYG-----------TRFGYALGNGTIGIYDRATRVWRFKSKHQVVCVDGYDLDADGVPELISGWHNGKVEVRSDKNGEV 282          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15608.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A250XQ43_9CHLO1.670e-8350.19Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A7S3VM43_DUNTE8.200e-8352.09Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A7S0T4B9_9CHLO1.290e-8249.81Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
UPI00138FA57C2.960e-8249.81Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Ne... [more]
UPI00077A88633.410e-8251.32Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Ac... [more]
A0A2K3DMF6_CHLRE4.450e-8253.21Uncharacterized protein n=4 Tax=Chlamydomonas TaxI... [more]
A0A2B4RD87_STYPI9.900e-8250.19Bardet-Biedl syndrome 2 protein homolog n=4 Tax=Sc... [more]
A0A7S1G4Y1_9STRA1.090e-8150.18Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
UPI001B88DF7C1.830e-8050.19Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Gi... [more]
A0A7S1IWS5_9EUGL1.180e-7950.94Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15608contigP-wetherbeei_contig15608:30..1543 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog45351.EDO39492
Preferred nameBBS2
PFAMsBBS2_C,BBS2_Mid,BBS2_N
Model size798
Max annot lvl33208|Metazoa
KEGG koko:K16747
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001085,GO:0001103,GO:0001501,GO:0001578,GO:0001894,GO:0001895,GO:0003006,GO:0003008,GO:0003012,GO:0003013,GO:0003018,GO:0003352,GO:0003356,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005902,GO:0005929,GO:0006810,GO:0006892,GO:0006893,GO:0006928,GO:0006936,GO:0006939,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007288,GO:0007368,GO:0007369,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007600,GO:0007601,GO:0007610,GO:0008015,GO:0008104,GO:0008134,GO:0008150,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010605,GO:0010629,GO:0014820,GO:0014824,GO:0014829,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0019221,GO:0019222,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021756,GO:0021761,GO:0021766,GO:0021987,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030317,GO:0030534,GO:0030900,GO:0031090,GO:0031253,GO:0031514,GO:0031667,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032400,GO:0032401,GO:0032402,GO:0032420,GO:0032421,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032879,GO:0032886,GO:0032991,GO:0033036,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034464,GO:0034613,GO:0035082,GO:0035150,GO:0035296,GO:0036064,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040015,GO:0040018,GO:0042221,GO:0042310,GO:0042311,GO:0042592,GO:0042886,GO:0042995,GO:0043001,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043473,GO:0044085,GO:0044320,GO:0044321,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045184,GO:0045444,GO:0045494,GO:0045926,GO:0045927,GO:0046907,GO:0048193,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048583,GO:0048585,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048640,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050880,GO:0050896,GO:0050953,GO:0051093,GO:0051094,GO:0051179,GO:0051216,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051270,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051704,GO:0051716,GO:0051875,GO:0051877,GO:0051904,GO:0051905,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060632,GO:0061448,GO:0061512,GO:0061951,GO:0065007,GO:0065008,GO:0070121,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0071310,GO:0071345,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090066,GO:0090150,GO:0097458,GO:0097722,GO:0097746,GO:0097755,GO:0097756,GO:0098588,GO:0098590,GO:0098858,GO:0098862,GO:0098876,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902019,GO:1903441,GO:1905515,GO:1990778,GO:2000145
Exons4
Evalue3.04e-79
EggNOG OGs2C0K6@1|root,2QPWU@2759|Eukaryota,38CFK@33154|Opisthokonta,3BA3E@33208|Metazoa
DescriptionBardet-Biedl syndrome 2
Cds size798
COG categoryZ
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186061.7145503-CDS-P-wetherbeei_contig15608:29..3711683186061.7145503-CDS-P-wetherbeei_contig15608:29..371Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15608 30..371 -
1683186061.7290945-CDS-P-wetherbeei_contig15608:662..8121683186061.7290945-CDS-P-wetherbeei_contig15608:662..812Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15608 663..812 -
1683186061.7394059-CDS-P-wetherbeei_contig15608:1030..11761683186061.7394059-CDS-P-wetherbeei_contig15608:1030..1176Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15608 1031..1176 -
1683186061.7498348-CDS-P-wetherbeei_contig15608:1383..15431683186061.7498348-CDS-P-wetherbeei_contig15608:1383..1543Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15608 1384..1543 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15608.1.1prot_P-wetherbeei_contig15608.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15608 30..1543 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15608.1.1

>prot_P-wetherbeei_contig15608.1.1 ID=prot_P-wetherbeei_contig15608.1.1|Name=mRNA_P-wetherbeei_contig15608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
DGRQASLTCATSGGKVLIHNPHDRAMDHQPAVPGAQKGIRFLNINKRITA
LRAGNLAATGGEAADVLLIGTPSNLMAYDVEKNHDVFYKDVPDGVSAVIV
GKGPMSEEPLAFVGGNYSIQGFNREGAESFWTVTGDNVGALAFCDMDGDG
VAELVVGSDDFEVRVFKQEEVVLEITEADRVTHLHPFGGGGGCAGNGKPA
TRWGYGLANGTVGVYERGKRVWRAKTRHAVTAMASFDIDGDGVEELICGF
DSGSLVARNAATGEVR
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mRNA from alignment at P-wetherbeei_contig15608:30..1543-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15608.1.1 ID=mRNA_P-wetherbeei_contig15608.1.1|Name=mRNA_P-wetherbeei_contig15608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1514bp|location=Sequence derived from alignment at P-wetherbeei_contig15608:30..1543- (Phaeothamnion wetherbeei SAG_119_79)
GATGGCAGGCAGGCTTCGCTCACTTGCGCAACATCAGGCGGAAAGGTATT GATACACAACCCTCATGACAGAGCGATGGACCACCAGCCGGCTGTACCCG GTGCGCAAAAGGGAATACGCTTCCTCAACATCAACAAGCGCATCACCGCA CTCAGGGCAGGTAAGCAACATCCGCGAGGCGCCTTGCATCCTGCGAAGAT ATAACGAAACCCAAAGCTGGGAAAAATAAAAGAGAAAGGCAAACAACTTT GGCCATCGCTGTTCTGGCTTTGAAATACTGGAATTTGGTAGGTTTGCTTT CGAAGGTCACCCCTTGATCCATTTCCCTTGGTCTTTCATGGCTTTTCCTT CTACCGCTGCAATCCAGGGAATCTGGCCGCCACCGGTGGCGAGGCCGCTG ATGTGCTTCTCATCGGCACACCGTCCAACTTGATGGCGTATGACGTGGAG AAGAACCACGATGTCTTCTACAAAGATGTCCCCGACGGCGTCAGCGCCGT AATCGTGGGGAAGGTGCGTTCGGCACGGCAGTATTTGGGGCGGCCAATAG TTAACCCACTACATGACTTCTGAGAGAAATTAAATGTAGAAAAGACAAGA CCTGCAGAAAGGATGGACAACACACCCGAAGCCGCAGTTCCGCCTATGCC CCTCCAATAATTTGAGCGCTTGTACCTCGCTAACAGCGAATTGTCGGCTC GCTCTGCCCGCTGTCCGATTGTTCGGCACAGGGCCCCATGTCGGAAGAGC CGCTGGCGTTTGTCGGAGGCAACTACTCGATTCAGGGCTTCAACCGCGAG GGGGCAGAGTCCTTCTGGACCGTCACGGGCGACAACGTCGGCGCGCTTGC CTTTTGCGACATGGACGGCGACGGCGTGGCGGTAAGTGGATAGTCAGGCA GTTGTATAGTGAATGAACGGCAGCATTTCAAGTGGCTTACGTCATATGAT GGTTGAAATTGTATTGTTCGTACGCGAATGAATTGCAAGTCAGCTTCTGC AAAGCTAACCCAGTTGTTTCGCTTCTCCGATTTCGTCGTTGGATGCGGCT AGATCTCCAAGTTTTGTGGAAGGATACTCTTTCGCAGTCTTCCAAATACA TTTTGCTTGAAGCAGCCAGCTGTACGCCCGAATTTCCTTTCATTTCTATC CCTCCTTCGTCTCCCTTTGCAGGAGCTGGTGGTGGGCTCCGACGACTTTG AAGTCCGCGTCTTCAAGCAAGAAGAGGTGGTGCTCGAGATCACCGAGGCC GACCGCGTCACCCATCTCCACCCCTTCGGCGGCGGTGGCGGCTGCGCCGG CAATGGCAAGCCCGCCACCCGCTGGGGCTACGGTCTGGCGAACGGCACGG TCGGGGTGTACGAGCGCGGCAAGCGTGTATGGCGTGCCAAGACACGTCAT GCAGTGACGGCGATGGCCAGCTTCGACATCGACGGCGACGGGGTGGAGGA GCTCATCTGCGGCTTCGACAGTGGCTCCCTCGTGGCGAGAAACGCCGCCA CGGGCGAGGTGAGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15608:30..1543-

>mRNA_P-wetherbeei_contig15608.1.1 ID=mRNA_P-wetherbeei_contig15608.1.1|Name=mRNA_P-wetherbeei_contig15608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig15608:30..1543- (Phaeothamnion wetherbeei SAG_119_79)
GATGGCAGGCAGGCTTCGCTCACTTGCGCAACATCAGGCGGAAAGGTATT
GATACACAACCCTCATGACAGAGCGATGGACCACCAGCCGGCTGTACCCG
GTGCGCAAAAGGGAATACGCTTCCTCAACATCAACAAGCGCATCACCGCA
CTCAGGGCAGGGAATCTGGCCGCCACCGGTGGCGAGGCCGCTGATGTGCT
TCTCATCGGCACACCGTCCAACTTGATGGCGTATGACGTGGAGAAGAACC
ACGATGTCTTCTACAAAGATGTCCCCGACGGCGTCAGCGCCGTAATCGTG
GGGAAGGGCCCCATGTCGGAAGAGCCGCTGGCGTTTGTCGGAGGCAACTA
CTCGATTCAGGGCTTCAACCGCGAGGGGGCAGAGTCCTTCTGGACCGTCA
CGGGCGACAACGTCGGCGCGCTTGCCTTTTGCGACATGGACGGCGACGGC
GTGGCGGAGCTGGTGGTGGGCTCCGACGACTTTGAAGTCCGCGTCTTCAA
GCAAGAAGAGGTGGTGCTCGAGATCACCGAGGCCGACCGCGTCACCCATC
TCCACCCCTTCGGCGGCGGTGGCGGCTGCGCCGGCAATGGCAAGCCCGCC
ACCCGCTGGGGCTACGGTCTGGCGAACGGCACGGTCGGGGTGTACGAGCG
CGGCAAGCGTGTATGGCGTGCCAAGACACGTCATGCAGTGACGGCGATGG
CCAGCTTCGACATCGACGGCGACGGGGTGGAGGAGCTCATCTGCGGCTTC
GACAGTGGCTCCCTCGTGGCGAGAAACGCCGCCACGGGCGAGGTGAGA
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