mRNA_P-wetherbeei_contig15559.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Match: D8LEN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN7_ECTSI) HSP 1 Score: 132 bits (333), Expect = 6.570e-32 Identity = 107/226 (47.35%), Postives = 137/226 (60.62%), Query Frame = 1
Query: 16 MEMRFGLEAATAEAERLRRRLGEVQTLAAAAEATSGGGHGGGANSGPRGAGGRFKRERDLEGVVDALKRVVERLRGENDRLRRGAADGTKAAEAERRAREARQELEEXXKAGEGLKTRVLAGEEAVQRLAQKQEAVNHLRRQLRTKDEELRSAARDLQTSEATRAALAAELEQANRVVL-----ERSRTRPAPLPAATASAPGGAEGDGAVVVALREEVAVLRERL 678
+E+RF LEA TAE ERLRRR E+Q A GG GA G R AGGRFKRERDLEGVVDALKRV ++LRGENDRLRR A +G AEAER AREA+++ + + L R + AVQ+LAQKQE VN LRR L+ +D +++ + T+ L+AELE AN+ ++ RS R P PAA A+A E + A + E A LR+++
Sbjct: 489 VELRFDLEARTAETERLRRRARELQA------ALKTGGGTAGAKDGSRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAAALREEVDKLTARAKDADSAVQKLAQKQELVNQLRRTLKVRDATIKTFQERAEDLAETKTLLSAELEAANQRLVASDRDSRSSGRSRP-PAAAAAAHTARELEDA-----KREAATLRQQV 702
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Match: A0A6H5KTB3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB3_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.650e-30 Identity = 93/187 (49.73%), Postives = 120/187 (64.17%), Query Frame = 1
Query: 4 DADAMEMRFGLEAATAEAERLRRRLGEVQTLAAAAEATSGGGHGGGANSGPRGAGGRFKRERDLEGVVDALKRVVERLRGENDRLRRGAADGTKAAEAERRAREARQELEEXXKAGEGLKTRVLAGEEAVQRLAQKQEAVNHLRRQLRTKDEELRSAARDLQTSEATRAALAAELEQANRVVLERSR 564
D+ +E+RF LEA TAE ERLRRR E+Q AA T G GA G R AGGRFKRERDLEGVVDALKRV ++LRGENDRLRR A +G AEA+R AREA+++ E + + L R + AVQ+LAQKQ+ VN LRR L+ +D +++ + + L+AELE AN+ ++ R
Sbjct: 2189 DSANVELRFDLEARTAETERLRRRTRELQ----AALKTGGXXXXXGAKDGSRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAQRSAREAKKKAAELREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDATIKTFQDRAEDLAEAKTLLSAELEAANQRLVASDR 2371
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Match: A0A7S1UJF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJF9_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.590e-29 Identity = 98/219 (44.75%), Postives = 123/219 (56.16%), Query Frame = 1
Query: 4 DADAMEMRFGLEAATAEAERLRRRLGEVQTLAAAAEATSGGGHGGGANSGPRGAGGRFKRERDLEGVVDALKRVVERLRGENDRLRRGAADGTKAAEAERRAREARQELEEXXKAGEGLKTRVLAGEEAVQRLAQKQEAVNHLRRQLRTKDEELRSAARDLQTSEATRAALAAELEQANRVVLERSRTRPAPLPAATASAPGGAEGDGAVVVALREEVA 660
DA ME+ F + AA +ER RR+ E++ + A GG R AGGRF RERDLEGVVDALKRVV++L+ EN+RLRRGAA+ TK +EAERRAR+AR + E L+TR AGEEA QRLA K E LRR ++ +D EL+ + E TR L AN+ VL+ R A S G GDG V LR ++A
Sbjct: 209 DAKNMELTFEVSAANTRSERFARRVAELEGVINRGGAGKGGXXXXXXXGKGRKAGGRFNRERDLEGVVDALKRVVDKLKSENERLRRGAAESTKVSEAERRARDARGRVAELQAELTALRTRAAAGEEASQRLASKTEQSAQLRRAIKRRDGELKDLRDKVDELERTRQNLEEAANNANKRVLQLERR-------ADGSRRSG--GDGGDVARLRRQLA 418
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Match: A0A7S2SBL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBL1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.160e-19 Identity = 70/159 (44.03%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 4 DADAMEMRFGLEAATAEAERLRRRLGEVQTLAAAAEATSGGGHGGGANSGPRGAGGRFKRERDLEGVVDALKRVVERLRGENDRLRRGAADGTKAAEAERRAREARQELEEXXKAGEGLKTRVLAGEEAVQRLAQKQEAVNHLRRQLRTKDEELRSAAR 480
++ +E++F L E ERLRRR V+ L A+ +A S GG GG S R G RFKRERDLE VV+ L++VV +L+ EN+RL+ G AD TK + AERRAR+A+ E + L+ R E+++ +LAQ+ E V+ L+R +R KDEE+++ R
Sbjct: 407 ESSTLELQFDLNLRDQEVERLRRR---VKELEASYDAVSTGGGGGAKAS--RAPGERFKRERDLESVVEGLQKVVNQLKRENERLKSGGADQTKLSAAERRARDAKSEATGLREELVSLRGRAATAEDSMSKLAQRNEQVSQLKRTIRQKDEEIQAHTR 560
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Match: A0A835Z7Q7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q7_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 3.720e-19 Identity = 77/163 (47.24%), Postives = 98/163 (60.12%), Query Frame = 1
Query: 4 DADAMEMRFGLEAATAEAERLRRRLGEVQTLAAAAEATSGGG---------HGGG---ANSGPRGAGGRFKRERDLEGVVDALKRVVERLRGENDRLRRGAADGTK-----AAEAERRAREARQELEEXXKAGEGLKTRVLAGEEAVQRLAQKQEAVNHLRRQ 441
DA A+ RF LEAA +EAERL+RR E+Q AA A +G H G A+ R GGRF RERDLE VV+ALKRVVE+LR ENDRL+RGAA T ++AERR R +EL + A LK R A +++ Q++AQ+Q+ + LRRQ
Sbjct: 53 DAAAIAARFDLEAAASEAERLQRRHREMQEALRAANARAGADPASPPRFPPHACGVAAADDATRLGGGRFNRERDLETVVEALKRVVEKLRAENDRLKRGAAAATAQGKAGGSDAERRLRRQNEELAQEVAA---LKARAAAADQSSQQIAQRQDLIGQLRRQ 212
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Match: A0A7R9U7K0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7K0_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.380e-18 Identity = 70/156 (44.87%), Postives = 88/156 (56.41%), Query Frame = 1
Query: 4 DADAMEMRFGLEAATAEAERLRRRLGEVQTLAAAAEATSGGGHGGGANSGPRGAGGRFKRERDLEGVVDALKRVVERLRGENDRLRRGAADGTKAAEAERRAREARQELEEXXKAGEGLKTRVLAGEEAVQRLAQKQEAVNHLRRQLRTKDEELRS 471
+A +ME++F + AAT ER RR+ E++ +E + G ++ R GGRFKRERDLEGVVDALKRV RGAA+ TK EAERR E GL+TR AGEEA QRLA K E + LRR L+ +D EL+S
Sbjct: 97 EAKSMELQFEVSAATTRNERFSRRISELEEAVRQSEVATAEG-----STLARKPGGRFKRERDLEGVVDALKRVXXXXXXXXXXXXRGAAESTKVNEAERRXXXXXXXXXELQAELTGLRTRAAAGEEASQRLASKTEQLAQLRRALKRRDGELKS 247
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Match: A0A7S3XY01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY01_HETAK) HSP 1 Score: 89.0 bits (219), Expect = 1.300e-17 Identity = 57/128 (44.53%), Postives = 83/128 (64.84%), Query Frame = 1
Query: 157 RGAGGRFKRERDLEGVVDALKRVVERLRGENDRLRRGAADGTKAAEAERRAREARQELEEXXKAGEGLKTRVLAGEEAVQRLAQKQEAVNHLRRQLRTKDEELRSAARDLQTSEATRAALAAELEQAN 540
R AG RF+RERDLEGVVD+L+RV+E+L+ EN+RLRRGA D K A+A+ XX G +A QRLAQ+++AV HLR+Q+R++D+E+ S + + + ++ L+ ELE+AN
Sbjct: 5 RAAGDRFQRERDLEGVVDSLRRVIEKLKAENERLRRGAGDRAKVADADXXXXXXXXXXXXXXXXXXXXXXXXXXGGDASQRLAQQRDAVAHLRKQMRSRDKEIESLQKQITQQDQSKGLLSGELERAN 132
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Match: A0A7S2SL49_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SL49_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.930e-12 Identity = 48/128 (37.50%), Postives = 77/128 (60.16%), Query Frame = 1
Query: 157 RGAGGRFKRERDLEGVVDALKRVVERLRGENDRLRRGAADGTKAAEAERRAREARQELEEXXKAGEGLKTRVLAGEEAVQRLAQKQEAVNHLRRQLRTKDEELRSAARDLQTSEATRAALAAELEQAN 540
RGAG FKRERDLE VV+++K+VV +L+ EN+RL+R + + +E +R +E +E ++ + E L RV EA ++ + ++AV L++Q+R++D L L A A L E+E+AN
Sbjct: 2143 RGAGELFKRERDLENVVESMKKVVSKLQSENERLKRSTSGNARYSELGKRVKELERERDQLETSNEALSRRVQQNSEASTKVIRLEDAVKSLKKQIRSRDTALEKEKSKLDNLRAENARLTGEIEEAN 2270
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Match: A0A6S8BP76_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8BP76_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.350e-7 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 1
Query: 157 RGAGGRFKRERDLEGVVDALKRVVERLRGENDRLRRGAADGTKAAEAERRAREARQELEEXXKAGEGLKTRVLAGEEAVQRLAQKQEAVNHLRRQLRTKDEELRSA 474
R AG RFKRERDLE V+DALKR+V +L+GEN RL+R +A K E ++ RE R E ++ R + E +LA+ + ++ ++ LR KD+EL A
Sbjct: 256 RRAGERFKRERDLENVIDALKRLVNKLQGENSRLKRSSASNAKYVELIKQVRELRTANERLKESTAEKIRRDTSTSEMSLKLARMKNISSNQKKLLRDKDKELTEA 361
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Match: A0A2R5G9X9_9STRA (Centrosomal protein of 290 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9X9_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.810e-7 Identity = 51/148 (34.46%), Postives = 81/148 (54.73%), Query Frame = 1
Query: 16 MEMRFGLEAATAEAERLRR----RLGEVQTLAAAAEATSGGGHGGGANSGPRGAGGRFKRERDLEGVVDALKRVVERLRGENDRLRRGAADGTKAAEAERRAREARQELEEXXKAGEGLKTRVLAGEEAVQRLAQKQEAVNHLRRQLR 447
+E+RF +E ++E ER RR +L T ++ ATS R G RFKRERDLE VV+++K+VV +L+ EN+RL+R + + +++ R +QE + A + L+ R + E+ + + Q+AV LRRQ R
Sbjct: 2187 LELRFEMEQLSSEVERCRRDDESKLPSSGTSPSSRGATS------------RAPGERFKRERDLENVVESMKKVVSKLQAENERLKRTHTSSARYGDLQKQVRALKQENQALVSARDTLQDRAVKYSESSAKAIRLQDAVRGLRRQTR 2322 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15559.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15559.1.1 >prot_P-wetherbeei_contig15559.1.1 ID=prot_P-wetherbeei_contig15559.1.1|Name=mRNA_P-wetherbeei_contig15559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp MEMRFGLEAATAEAERLRRRLGEVQTLAAAAEATSGGGHGGGANSGPRGAback to top mRNA from alignment at P-wetherbeei_contig15559:106..1429- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15559.1.1 ID=mRNA_P-wetherbeei_contig15559.1.1|Name=mRNA_P-wetherbeei_contig15559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1324bp|location=Sequence derived from alignment at P-wetherbeei_contig15559:106..1429- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15559:106..1429- >mRNA_P-wetherbeei_contig15559.1.1 ID=mRNA_P-wetherbeei_contig15559.1.1|Name=mRNA_P-wetherbeei_contig15559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig15559:106..1429- (Phaeothamnion wetherbeei SAG_119_79)back to top |