mRNA_P-wetherbeei_contig15526.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A448YZH3_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZH3_9STRA) HSP 1 Score: 234 bits (598), Expect = 2.230e-75 Identity = 116/213 (54.46%), Postives = 160/213 (75.12%), Query Frame = 1
Query: 1 MDAVQLAQVESLCDALYNTV-------DENSRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
M+ QLAQVE+LC+ LY V ++ +RQ AQ +L+SLQSS ++IPQCQYIL N+KS YA +A NSLT L+TTHWNSFT QR+++RNY+ YL NNGP L ++V+ +LI L+CRITKLGWFD+ PV HR++ ++VT+FL ++++ CI+GL+I Q+V ELN+PTSGRTL QHRKT+VSFRDV L ++F L+T++Q++
Sbjct: 1 MEPAQLAQVEALCETLYTGVPTSGENGEQITRQDAQQRLMSLQSSADFIPQCQYILENTKSQYARLVATNSLTELITTHWNSFTIPQRIDIRNYVLTYLANNGPQLENFVVVSLIKLVCRITKLGWFDD--------PV--HRELADDVTKFLQATIEHCILGLKILNQLVDELNIPTSGRTLTQHRKTSVSFRDVCLLKVFQLGLTTLKQLQ 203
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A6H5L6F7_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6F7_9PHAE) HSP 1 Score: 248 bits (634), Expect = 5.010e-73 Identity = 124/206 (60.19%), Postives = 159/206 (77.18%), Query Frame = 1
Query: 1 MDAVQLAQVESLCDALYNTVDENSRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
MDA QL QVE+LC+ LYN+ DE +R AQNQLLSLQ+S E IPQCQYIL++S++AYAL LA++SLT L+++HWN+FT QRVE+RNYI YL + GPGL DYV T+LI LLCRITKLGWFD+ HR+VV+ V +FL ++ D +IGL+I Q+V E+N+PT+GRTLPQHRKTAVSFRD+ L IF +L +MQQ++
Sbjct: 1 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQ----------RHREVVDAVMRFLQATNDHYVIGLKILNQLVEEINIPTTGRTLPQHRKTAVSFRDLCLLPIFQIALKSMQQIQ 196
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A835YUW2_9STRA (RAN binding protein 16-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW2_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.910e-71 Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 1
Query: 1 MDAVQLAQVESLCDALYNTVDENSRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSS-SLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
MDA QLAQVESLCDALYN +E R AQ QL+SLQSS +YIPQCQYIL+NS++ YA LA+NSLT L+T HWNSF+ QRV++RNYI YL + GP L DYV+TAL+ LLCRITKLGWFD+ HR +V+E +FL + S IIGLRI Q+V E+N+P++GRTLPQHRKTAVSFRD L RIF+ +L+ +QQ++
Sbjct: 3 MDAQQLAQVESLCDALYNAANEAQRASAQQQLMSLQSSVDYIPQCQYILDNSQNPYARLLASNSLTQLITQHWNSFSVPQRVDIRNYILSYLASQGPSLKDYVVTALVQLLCRITKLGWFDDA----------AHRDLVDETLKFLGAPSTAHYIIGLRILNQLVEEINIPSNGRTLPQHRKTAVSFRDTCLLRIFNIALTALQQLK 199
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A4D9CV70_9STRA (Importin N-terminal domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV70_9STRA) HSP 1 Score: 244 bits (622), Expect = 2.500e-71 Identity = 124/206 (60.19%), Postives = 157/206 (76.21%), Query Frame = 1
Query: 1 MDAVQLAQVESLCDALYNTVDENSRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
MD L Q+E LCDALYN+ E+ RQQAQ QLLSLQSS EYIPQCQYIL++S S+YAL +AAN+LT L+T +WN+F+ AQRVE+RNY+ YL N G + D+V T+LI L+CRITKLGWFD+ +HR++VE+V +FL +++D CI+GLRI Q+V E N+PTSGRTL HRKTAVSFRD+ LF IF LST+QQV+
Sbjct: 1 MDTQGLQQLELLCDALYNSSSESERQQAQQQLLSLQSSAEYIPQCQYILDHSHSSYALFVAANALTKLITQYWNNFSVAQRVEIRNYVLSYLANQGHQVPDFVTTSLIQLVCRITKLGWFDDP----------QHRELVEDVEKFLHANVDYCIVGLRILNQVVEEFNLPTSGRTLTLHRKTAVSFRDLCLFHIFQICLSTLQQVQ 196
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: K0RJV1_THAOC (Importin N-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJV1_THAOC) HSP 1 Score: 239 bits (611), Expect = 7.930e-70 Identity = 118/210 (56.19%), Postives = 159/210 (75.71%), Query Frame = 1
Query: 1 MDAVQLAQVESLCDALYNTVDEN----SRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
MD QLAQVESLC+ LY N SR++AQ++LLSLQS+ +IPQCQYIL+ SKS YAL +A+NSLT L+TTHWN+FT AQR+++RNY+ YL NNGP L D+V +LI L+CRITKLGWFD+ HR++ E+VT+FL +++D CI+GL+I Q+V ELN+ T+GRTL QHRKT+VSFRD+ LF++F L+T++Q++
Sbjct: 1 MDEAQLAQVESLCETLYTGTSSNGESYSREEAQSRLLSLQSNASFIPQCQYILDRSKSQYALLVASNSLTELITTHWNNFTIAQRIDIRNYVLGYLANNGPTLQDFVTLSLIKLVCRITKLGWFDDP----------THRELTEDVTKFLQATVDHCILGLQILNQLVDELNIATTGRTLTQHRKTSVSFRDLCLFKVFQLGLTTLKQLQ 200
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: B7FRZ4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRZ4_PHATC) HSP 1 Score: 239 bits (610), Expect = 9.980e-70 Identity = 118/212 (55.66%), Postives = 158/212 (74.53%), Query Frame = 1
Query: 1 MDAVQLAQVESLCDALYNTVDEN------SRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
MDA QL QVE+LC+ LY V N +R +AQ +LLSLQS+ EYIPQCQYIL+NSKS YA +A+NSL LVT HWNSFT QR+++RNY+ YL NNGP L D+++ +LI L+CRITKLGWFD++ HR++ ++VT+FL +++D CI+GL+I Q+V ELN+PTSGRTL QHRKT+VSFRDV L ++F L+T++Q++
Sbjct: 1 MDAAQLVQVEALCETLYTGVAANFDSETVTRSEAQQRLLSLQSNAEYIPQCQYILDNSKSQYARLVASNSLIELVTIHWNSFTVPQRIDIRNYVLGYLANNGPSLQDFLVLSLIKLVCRITKLGWFDDS----------AHRELADDVTKFLQATVDHCILGLKILNQLVDELNIPTSGRTLTQHRKTSVSFRDVCLLKVFQLGLTTLKQLQ 202
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: B8C1X0_THAPS (Importin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1X0_THAPS) HSP 1 Score: 239 bits (609), Expect = 1.190e-69 Identity = 117/213 (54.93%), Postives = 162/213 (76.06%), Query Frame = 1
Query: 1 MDAVQLAQVESLCDALY-------NTVDENSRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
MD QLAQVE+LC+ LY + D +R++AQ++LLSLQSS +IPQCQYIL+ S+S YAL +A+NSLT L+TTHWN+FT AQR+++RNY+ YL NNGP L D+V +LI L+CRITKLGWFD++ HR++ E+VT+FL +++D CI+GL++ Q+V ELN+PT+GRTL QHRKT+VSFRD+ LF++F L+T+QQ++
Sbjct: 1 MDDSQLAQVEALCETLYTGQSVASSNSDPITREEAQSRLLSLQSSANFIPQCQYILDRSQSQYALLVASNSLTELITTHWNNFTIAQRIDIRNYVLGYLANNGPTLQDFVTLSLIKLVCRITKLGWFDDS----------THRELTEDVTKFLQATIDHCILGLKLLNQLVDELNIPTTGRTLTQHRKTSVSFRDLCLFKVFQLGLTTLQQLQ 203
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A7S1Z0P3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z0P3_TRICV) HSP 1 Score: 218 bits (555), Expect = 3.060e-68 Identity = 102/183 (55.74%), Postives = 143/183 (78.14%), Query Frame = 1
Query: 70 SRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
SR +AQ++LLSLQSS +YIPQCQYIL++S+S YA +A+NSLT L+TTHWN+FT QR+++RNY+ YL N GP L D+V+ +L+ L+CRITKLGWFD+ HR++ ++VT+FL +++D I+GL+I Q+V ELN+PTSGRTL QHRKT+VSFRDV LF++F L+T++Q++
Sbjct: 2 SRAEAQSRLLSLQSSADYIPQCQYILDHSQSHYARLVASNSLTELITTHWNNFTVPQRIDIRNYVLSYLANQGPALQDFVVVSLVKLVCRITKLGWFDDP----------THRELADDVTKFLQATVDHAILGLKILNQLVDELNIPTSGRTLTQHRKTSVSFRDVCLFKVFQLGLTTLKQLQ 174
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A7S2L6Z5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L6Z5_9STRA) HSP 1 Score: 229 bits (584), Expect = 4.480e-66 Identity = 117/211 (55.45%), Postives = 156/211 (73.93%), Query Frame = 1
Query: 1 MDAVQLAQVESLCDALY--NTVDEN----SRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQV 615
MDA QL+QVE LCD LY + +E SRQ+AQN+L++LQSS +YIPQCQYIL+ S++ YA +AANSLT L+T+HWN+FT QR+++RNYI YL N GP L +YV +LI L+CRITKLGWFD+ HR++ E+V +FL +++D CI+GL+I Q+V ELN+PT+GRTL QHRKT+VSFRD L RIF L+T++Q+
Sbjct: 1 MDAQQLSQVERLCDTLYVGSPYEEGGVAISRQEAQNRLMALQSSADYIPQCQYILDQSQNQYARLVAANSLTELLTSHWNNFTVPQRIDIRNYILGYLANKGPNLENYVAISLIKLVCRITKLGWFDDK----------THRELSEDVQKFLQATVDHCILGLKILNQLVDELNIPTTGRTLTQHRKTSVSFRDTCLLRIFQLGLTTLKQL 201
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A1E7FRK9_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FRK9_9STRA) HSP 1 Score: 227 bits (578), Expect = 2.500e-65 Identity = 114/213 (53.52%), Postives = 157/213 (73.71%), Query Frame = 1
Query: 1 MDAVQLAQVESLCDALYN---TVDEN----SRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
MD+ QL QVE+LC+ LY T EN +RQ+AQ +L+SLQ S ++IPQCQYIL ++S YA +A NSLT L+TTHWNSFT QR+++RNY+ YL NNG L +V+ +LI L+CRITKLGWFD+ PV HR++ ++VT+FL ++++ CI+GL+I Q+V ELN+PTSGRTL QHRKT+VSFRDV L ++F L+T++Q++
Sbjct: 1 MDSAQLKQVEALCETLYTGMPTTGENGEQINRQEAQQRLMSLQQSADFIPQCQYILEKTQSQYARLVATNSLTELITTHWNSFTIPQRIDIRNYVLTYLANNGTQLESFVVVSLIKLVCRITKLGWFDD--------PV--HRELADDVTKFLQATVEHCILGLKILNQLVDELNIPTSGRTLTQHRKTSVSFRDVCLLKVFQLGLTTLKQLQ 203 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15526.1.1 >prot_P-wetherbeei_contig15526.1.1 ID=prot_P-wetherbeei_contig15526.1.1|Name=mRNA_P-wetherbeei_contig15526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=206bp MDAVQLAQVESLCDALYNTVDENSRQQAQNQLLSLQSSPEYIPQCQYILNback to top mRNA from alignment at P-wetherbeei_contig15526:3..620- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15526.1.1 ID=mRNA_P-wetherbeei_contig15526.1.1|Name=mRNA_P-wetherbeei_contig15526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig15526:3..620- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15526:3..620- >mRNA_P-wetherbeei_contig15526.1.1 ID=mRNA_P-wetherbeei_contig15526.1.1|Name=mRNA_P-wetherbeei_contig15526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig15526:3..620- (Phaeothamnion wetherbeei SAG_119_79)back to top |