mRNA_P-wetherbeei_contig1546.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Match: A0A836CAQ4_9STRA (Tim17-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ4_9STRA) HSP 1 Score: 254 bits (650), Expect = 8.900e-80 Identity = 148/264 (56.06%), Postives = 176/264 (66.67%), Query Frame = 3
Query: 123 MGDREPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAG--QRLYGSFAAVKARSPVLGGNFAVWGGLFACFDCSLVALRHKEDPWNSIMSGAATGGMLALRAGPKTAAKNALVGGVLLALIEGFGIALTKMLAQMPPXXXXXXXXXXXXXXXXP----QPGLAPPIPMPGVFGSLGGLIGXXXXXXXXXXXXAVDPTAPPQTDITTGRGFDTDTRFRDPFATNDPFVGIDSGGSAESATASLREAEGGEQRRGWFGGMFRR 896
M +REPCP+R+IDDVG A++FGAVGG +++T+KGARNAP G S +AVKAR+PVLGGNFAVWGGLFAC DC++ ALR KEDPWNSI SGAATGG+LALRAGPKTAAKNALVGGVLLALIEG GI L++M AQM P Q LAPPIP FG+ GG AVDP+AP Q+D+ +G GFDTD+R+ DPFA DP+ SGG A + A +RG+FGG+F R
Sbjct: 1 MSEREPCPYRIIDDVGGAYVFGAVGGGVFHTIKGARNAPKGLNNSWXXSVSAVKARAPVLGGNFAVWGGLFACCDCTMAALRRKEDPWNSIASGAATGGILALRAGPKTAAKNALVGGVLLALIEGMGIGLSRMFAQMKPEDMPAILQEGGGAAPDEGGPKQRALAPPIP----FGAHGG------GAPGRRHDDAVDPSAPRQSDVMSGSGFDTDSRYADPFAQADPYA--TSGGLVPEAGGAGAGAPEAPPKRGFFGGLFGR 252
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Match: D7FI64_ECTSI (Tim17 homolog, mitochondrial inner membrane protein of TIM23 complex n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI64_ECTSI) HSP 1 Score: 227 bits (578), Expect = 7.890e-69 Identity = 131/270 (48.52%), Postives = 161/270 (59.63%), Query Frame = 3
Query: 123 MGDREPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAGQRLYGSFAAVKARSPVLGGNFAVWGGLFACFDCSLVALRHKEDPWNSIMSGAATGGMLALRAGPKTAAKNALVGGVLLALIEGFGIALTKMLAQM--PPXXXXXXXXXXXXXXXXPQP----GLAPPIPMPGVFGSLGGLIGXXXXXXXXXXXXAVDPTAPPQTDITTGRGFDTDTRFRDPFATNDPFVG------IDSGGSAESATASLREAEGGEQRRGWFGGMFRR 896
MGDR+PCP R++ DVG AF FG GG IW++VKG RN+P GQ G+ AV R+PVLGGNFAVWG LF+ DCSLVA+RHKED WN I+SGAATGG+LALRAGP+TAAKNA+VGG LLA+IEG GI L++ +AQ+ PP PQ GLAPP+P +G VD +A D+ TG GF+T +RF D AT DPF ++ G + A + A G + RGWFG M R
Sbjct: 1 MGDRDPCPHRIVGDVGGAFAFGLAGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQVEPPPMEAGGDAGGAGGGLGAPQAPRPLGLAPPLPP----------VGAPAGYRPMGDGGEVDSSATRSHDVVTGSGFETGSRFEDTLATQDPFASNTGDRYLEGGAAPRGAGDAAAAAAEGAESRGWFGRMIGR 260
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Match: A0A8J2SJP6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJP6_9STRA) HSP 1 Score: 212 bits (539), Expect = 3.100e-64 Identity = 110/171 (64.33%), Postives = 127/171 (74.27%), Query Frame = 3
Query: 123 MGD---REPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAGQRLYGSFAAVKARSPVLGGNFAVWGGLFACFDCSLVALRHKEDPWNSIMSGAATGGMLALRAGPKTAAKNALVGGVLLALIEGFGIALTKMLAQMPPXXXXXXXXXXXXXXXXP--QPGLAPPIPMP 620
MGD REPCP+R++DD+G A+ G VGGSIW+ VKG RNAP G G+F V+ R+PV+GGNFAVWGGLFACFDCSLVA+RHKEDPWNSI++GAATGG+LA RAGPK A KNALVGGVLLALIEG GI +TKM+A PP P QPGLAPP+ P
Sbjct: 1 MGDFSGREPCPYRILDDIGGAYAMGCVGGSIWHFVKGWRNAPKGSATSGAFEQVRVRAPVVGGNFAVWGGLFACFDCSLVAVRHKEDPWNSILAGAATGGVLAARAGPKAAGKNALVGGVLLALIEGLGILITKMMA--PPMASKDDLKHGGADPTLPPTQPGLAPPVAFP 169
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Match: F0Y463_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y463_AURAN) HSP 1 Score: 203 bits (517), Expect = 1.520e-61 Identity = 97/131 (74.05%), Postives = 112/131 (85.50%), Query Frame = 3
Query: 132 REPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAGQRLYGSFAAVKARSPVLGGNFAVWGGLFACFDCSLVALRHKEDPWNSIMSGAATGGMLALRAGPKTAAKNALVGGVLLALIEGFGIALTKMLA 524
REPCP+R++DD+G A+ GAVGGSIW+ VKG RNAP Q G+ VK R+PV+GGNFAVWGGLFACFDCSLVA+RHKEDPWNSI++GAATGG+LA RAGPK A KNALVGGVLLALIEG GI +TKM+A
Sbjct: 1 REPCPYRILDDIGGAYAMGAVGGSIWHFVKGWRNAPKNQGFSGAIEQVKVRAPVVGGNFAVWGGLFACFDCSLVAVRHKEDPWNSILAGAATGGVLAARAGPKAAGKNALVGGVLLALIEGLGILITKMMA 131
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Match: A0A1E7FD74_9STRA (Tim17-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD74_9STRA) HSP 1 Score: 206 bits (525), Expect = 2.360e-61 Identity = 100/138 (72.46%), Postives = 113/138 (81.88%), Query Frame = 3
Query: 123 MGDREPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAGQRLYGSFAAVKARSPVLGGNFAVWGGLFACFDCSLVALRHKEDPWNSIMSGAATGGMLALRAGPKTAAKNALVGGVLLALIEGFGIALTKMLAQMPP 536
M DREPCPWRV+DDVG AF G +GG +W+++KGAR APAG R GS +AV AR+PVLGG FAVWGGLFACFDCSL ALR KEDPWNSI+SGAATGG+LA+RAGP+ AA AL+GGVLLALIEG GI TKM A P
Sbjct: 7 MADREPCPWRVVDDVGGAFCMGNIGGGMWHSIKGARMAPAGARFAGSLSAVSARAPVLGGQFAVWGGLFACFDCSLTALRQKEDPWNSIVSGAATGGVLAVRAGPQAAASAALIGGVLLALIEGMGIMFTKMTAPPSP 144
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Match: A0A7S1Y2X7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2X7_9STRA) HSP 1 Score: 203 bits (517), Expect = 4.920e-60 Identity = 97/138 (70.29%), Postives = 113/138 (81.88%), Query Frame = 3
Query: 123 MGDREPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAGQRLYGSFAAVKARSPVLGGNFAVWGGLFACFDCSLVALRHKEDPWNSIMSGAATGGMLALRAGPKTAAKNALVGGVLLALIEGFGIALTKMLAQMPP 536
M DREPCPWR++DDVG AF GA+GG +W++++GAR APAG R GS +AV+ARSPVLGG FAVWGG+FAC DCSL A+R KEDPWNSI+SGAATGG+LA RAGP+ A A+VGGVLLALIEGFGI TKM A P
Sbjct: 7 MADREPCPWRIVDDVGGAFCMGAIGGGVWHSIRGARLAPAGARFAGSMSAVQARSPVLGGQFAVWGGIFACCDCSLTAVRQKEDPWNSIISGAATGGILAARAGPRAMASAAVVGGVLLALIEGFGIMFTKMTAPAVP 144
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Match: A0A7S0XM34_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XM34_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.520e-59 Identity = 97/138 (70.29%), Postives = 112/138 (81.16%), Query Frame = 3
Query: 123 MGDREPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAGQRLYGSFAAVKARSPVLGGNFAVWGGLFACFDCSLVALRHKEDPWNSIMSGAATGGMLALRAGPKTAAKNALVGGVLLALIEGFGIALTKMLAQMPP 536
M DREPCPWR+IDDVG AF G +GG +W+++KGAR AP+G RL GS +AV+AR+PVLGG FA+WGG+FACFDCSL A+R KEDPWNSI+SGAATGG LALRAGP+ AA A VGGVLLALIEG GI KM A P
Sbjct: 7 MADREPCPWRIIDDVGGAFCMGNIGGGMWHSIKGARMAPSGARLAGSLSAVQARAPVLGGQFAIWGGIFACFDCSLTAIRQKEDPWNSIISGAATGGTLALRAGPQAAASAAAVGGVLLALIEGMGIMFGKMFAPPSP 144
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Match: A0A1Z5KI64_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI64_FISSO) HSP 1 Score: 198 bits (504), Expect = 2.310e-58 Identity = 96/138 (69.57%), Postives = 114/138 (82.61%), Query Frame = 3
Query: 123 MGDREPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAGQRLYGSFAAVKARSPVLGGNFAVWGGLFACFDCSLVALRHKEDPWNSIMSGAATGGMLALRAGPKTAAKNALVGGVLLALIEGFGIALTKMLAQMPP 536
+ DREPCP+R+IDD+G AF G +GG IW++VKGAR APAG R+ GS +AV ARSPVLGG FAVWGGLFAC DC+L A+R KEDPWNSI+SGAATGG+LA RAGP+ AA A+VGGVLLALIEG GI +++ LA PP
Sbjct: 6 IADREPCPYRIIDDIGGAFCMGCIGGGIWHSVKGARLAPAGARMAGSMSAVIARSPVLGGQFAVWGGLFACCDCTLTAVRQKEDPWNSIISGAATGGILAARAGPRAAASAAVVGGVLLALIEGMGIMISRALAPAPP 143
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Match: A0A6S8D9L3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8D9L3_9STRA) HSP 1 Score: 196 bits (497), Expect = 5.760e-58 Identity = 100/163 (61.35%), Postives = 119/163 (73.01%), Query Frame = 3
Query: 132 REPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAGQRLYGSFAAVKARSPVLGGNFAVWGGLFACFDCSLVALRHKEDPWNSIMSGAATGGMLALRAGPKTAAKNALVGGVLLALIEGFGIALTKMLAQMPPXXXXXXXXXXXXXXXXPQPGLAPPIPMP 620
REPCP+R+IDDVG A+ GA+GGSIW+ VKG RN+P G L G+ ++ R+P++GGNFAVWGGLFA FDCSL A+R KEDPWNSI++GAATGG+LA RAGPK AAKNA+VGG+LLALIEG GI +TK A P Q GLAPPIP P
Sbjct: 8 REPCPYRIIDDVGGAYAMGAIGGSIWHFVKGWRNSPRGSALAGAVDQMQVRAPIVGGNFAVWGGLFAVFDCSLSAVRQKEDPWNSILAGAATGGVLAARAGPKAAAKNAVVGGILLALIEGLGILITKAFA---PPVPSKDDLKHGDGGAPAQVGLAPPIPFP 167
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Match: A0A7S1ZR17_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZR17_TRICV) HSP 1 Score: 197 bits (500), Expect = 4.490e-57 Identity = 110/225 (48.89%), Postives = 132/225 (58.67%), Query Frame = 3
Query: 123 MGDREPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAGQRLYGSFAAVKARSPVLGGNFAVWGGLFACFDCSLVALRHKEDPWNSIMSGAATGGMLALRAGPKTAAKNALVGGVLLALIEGFGIALTKMLAQMPPXXXXXXXXXXXXXXXXPQPGLAPPIPMPGVFGSLGGLIGXXXXXXXXXXXXAVDPTAPPQTDITTGRGFDTDTRFRDPFATNDPFVG 797
+ DREPCPWR++DDVG AF GA+GG I++ +KG+ NAP G R++G A+ AR PVLGG FAVWGGLFAC DC+L ++R KEDPWNSI SGA TGG+LA RAGPK AA A+VGGVLLALIEG GI TKM ++PP+P P ++ G AVDPTAPP GR P A +DPF G
Sbjct: 48 IADREPCPWRIVDDVGGAFCMGAIGGGIFHVIKGSLNAPKGSRMHGGVTAMAARGPVLGGQFAVWGGLFACCDCTLTSIRQKEDPWNSITSGAVTGGVLAARAGPKAAASAAVVGGVLLALIEGMGIMFTKM--------------------------MSPPLPTPDMYEQAG----------------AVDPTAPPTAGGLMGR-------TAPPSAPSDPFSG 223 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1546.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1546.2.1 >prot_P-wetherbeei_contig1546.2.1 ID=prot_P-wetherbeei_contig1546.2.1|Name=mRNA_P-wetherbeei_contig1546.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=260bp MGDREPCPWRVIDDVGSAFLFGAVGGSIWYTVKGARNAPAGQRLYGSFAAback to top mRNA from alignment at P-wetherbeei_contig1546:887..3121- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1546.2.1 ID=mRNA_P-wetherbeei_contig1546.2.1|Name=mRNA_P-wetherbeei_contig1546.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2235bp|location=Sequence derived from alignment at P-wetherbeei_contig1546:887..3121- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1546:887..3121- >mRNA_P-wetherbeei_contig1546.2.1 ID=mRNA_P-wetherbeei_contig1546.2.1|Name=mRNA_P-wetherbeei_contig1546.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig1546:887..3121- (Phaeothamnion wetherbeei SAG_119_79)back to top |