mRNA_P-wetherbeei_contig15429.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15429.1.1
Unique NamemRNA_P-wetherbeei_contig15429.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Match: A0A7C2YAL2_9PROT (Glutamate--tRNA ligase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YAL2_9PROT)

HSP 1 Score: 573 bits (1478), Expect = 2.460e-202
Identity = 280/381 (73.49%), Postives = 325/381 (85.30%), Query Frame = 1
Query:    1 QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEK-----PPAGVTPVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVVDDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGERLSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLERDGGIVAGGPPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPALVDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTPSIDATLELVGREQVLARMAAQLAYFP 1128
            +L+    AY+CY +KEEL+A+REAQRARGEKPRYDGRWR    +     PP GV PV+RF++P  G+VT+ND VKGPITVSN ELDDLVILR DG+PTYNFGVVVDDIDM ITHVIRGDDHVNNTPRQINIY+ALG  LPKFAH+PMILG DGERLSKRHGAV VMQY+D+G+LPEALVNYLARLGWSHGDEEKFTREQLIEWFDL HISKSPARF+P+KL WLNQQYIKEAD++RLA+L  PFLE  G  +A GP L  V+ LLKER +T+ ELA A+VYFYR +EPS ELK+QHY+A+I+PALVDL+ RLA  EW+R  INA+++AV+A H +K+PK+AMPLRVMV GTA TPSIDATLEL+GR+QV+ARM AQL  FP
Sbjct:   86 ELVREDKAYYCYAAKEELEALREAQRARGEKPRYDGRWRPEVARMENRMPPGGVQPVIRFRNPDHGEVTFNDLVKGPITVSNEELDDLVILRADGIPTYNFGVVVDDIDMKITHVIRGDDHVNNTPRQINIYRALGAALPKFAHVPMILGQDGERLSKRHGAVSVMQYKDEGYLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLEHISKSPARFNPEKLTWLNQQYIKEADDERLADLAAPFLEAHGCRIADGPSLARVVTLLKERVSTIEELAAAAVYFYRTLEPSEELKSQHYSAEIRPALVDLRNRLARTEWTREKINAAIRAVVADHKLKLPKIAMPLRVMVTGTAQTPSIDATLELIGRDQVIARMTAQLEQFP 466          
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Match: A0A1F4DNJ0_9PROT (Glutamate--tRNA ligase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DNJ0_9PROT)

HSP 1 Score: 566 bits (1460), Expect = 1.250e-199
Identity = 279/382 (73.04%), Postives = 323/382 (84.55%), Query Frame = 1
Query:    1 QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEK-----PPAGVTPVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVVDDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGERLSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLERDGGIVAGGPPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPALVDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTPSIDATLELVGREQVLARMAAQLAYFPG 1131
            +L+ AG AYHCY S+EELDA+RE QRARG+KPRYDGRWR    K     PP G  PV+RF++P EG+V ++D VKGPI V+N ELDDLV++R DG+PTYNFGVVVDDIDM+ITHVIRGDDHVNNTPRQINIY+ALG   PKFAH+PMILG DGERLSKRHGAV VMQY D+G+LPEALVNYLARLGWSHGDEEKF+  QLIEWFDL HISKSPARF+P+KL WLNQQYIKEADN RLAEL+ PFL  DG  V  GP L+ V+ALLKER NT+ ELADA+VYFYR ++PS EL+ +HYTA+IKPAL++LQQRLAG EW+R  IN ++KAVLA H +K+PK+AMPLRVMV G A TPSIDATLEL+GREQVL+R+A QL  FPG
Sbjct:   86 ELIRAGKAYHCYASREELDALREQQRARGDKPRYDGRWRPENAKRLGLTPPQGGAPVVRFRNPDEGEVIFDDLVKGPIAVANSELDDLVLIRADGIPTYNFGVVVDDIDMNITHVIRGDDHVNNTPRQINIYRALGAPQPKFAHVPMILGKDGERLSKRHGAVSVMQYHDEGYLPEALVNYLARLGWSHGDEEKFSSGQLIEWFDLQHISKSPARFNPEKLAWLNQQYIKEADNARLAELVTPFLAADGCDVRSGPLLSAVVALLKERVNTVEELADAAVYFYRPLDPSDELRHRHYTAEIKPALLELQQRLAGIEWNREKINEALKAVLAAHQLKLPKIAMPLRVMVTGEAKTPSIDATLELIGREQVLSRIAKQLQAFPG 467          
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Match: A0A1M7C5G8_9PROT (Glutamate--tRNA ligase n=6 Tax=Nitrosospira TaxID=35798 RepID=A0A1M7C5G8_9PROT)

HSP 1 Score: 557 bits (1435), Expect = 7.340e-196
Identity = 271/378 (71.69%), Postives = 318/378 (84.13%), Query Frame = 1
Query:    1 QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEKPPAGVTPVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVVDDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGERLSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLERDGGIVAGG--PPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPALVDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTPSIDATLELVGREQVLARMAAQLAYFP 1128
            QLL AG AYHCYCS+EELDAMRE QRA G KPRYDGRWRDSK+ PPAGV PV+R K+PLEG+VT+ND VKG ITV+N ELDDLV+LR DGVPTYNFGV++DD+DM+ITHVIRGDDHVNNTPRQINI KALG  LPK+AH+PMILG DGERLSKRHGAV VMQYR+DG+LPEAL+NYLARLGWSHGDEE F+REQL+EWFD   I++SPA+F+P+KL+WLNQQY+K  DN RLAEL++PFLE DG   +G   P LTGV+ LLKER NT+ ELADA+VYF+R +EP  ELK QH+TA++KP ++DL+Q+LA  EW   AIN ++K     H VKMPKVAMPLRVMVAG A TPSI+A LE++GRE+ L RM  QLA FP
Sbjct:   87 QLLRAGKAYHCYCSREELDAMREQQRAAGLKPRYDGRWRDSKQTPPAGVKPVVRLKNPLEGEVTFNDLVKGQITVANSELDDLVLLRADGVPTYNFGVMIDDLDMNITHVIRGDDHVNNTPRQINILKALGAPLPKYAHVPMILGPDGERLSKRHGAVSVMQYREDGYLPEALINYLARLGWSHGDEEIFSREQLVEWFDFSAINRSPAKFNPEKLQWLNQQYLKTVDNARLAELVRPFLEADGCNTSGQSVPSLTGVVNLLKERVNTVAELADAAVYFFRALEPVEELKAQHFTAEVKPVILDLRQKLAVIEWESDAINDAIKTAAKGHGVKMPKVAMPLRVMVAGIAQTPSINAVLEILGREETLKRMDNQLANFP 464          
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Match: SYE_NITMU (Glutamate--tRNA ligase n=10 Tax=Nitrosomonadales TaxID=32003 RepID=SYE_NITMU)

HSP 1 Score: 541 bits (1394), Expect = 1.250e-189
Identity = 263/377 (69.76%), Postives = 318/377 (84.35%), Query Frame = 1
Query:    1 QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEKPPAGVTPVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVVDDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGERLSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLERDGGIVAGG--PPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPALVDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTPSIDATLELVGREQVLARMAAQLAYF 1125
            QLL  G AY+CYCS+EELDAMRE QRA G KPRYDGRWRDS+E+PPAGV PV+R K+PL+G+VT+ D +KG ITV+N ELDDLV+LRGDGVPTYNFGVV+DD+DM+ITHVIRGDDHVNNTPRQINI KALG  LP++AH+PMILG+DGERLSKRHGAV VMQYR+DG+LPEALVNYLARLGWSHGDEE F+REQL+EWFDL +I++SPA+F+P+KL+WLNQQY+K ADN+RLAEL++PFL  DG  V GG  P L  V+ LLKER NT+ ELADA+VYF+R +EP+ EL+ Q+++A+ K  ++DL+ +LA  EW   AIN ++KA    H VKMPKVAMPLRVMV G A TP+I+A LEL+GRE+ L RM  QL YF
Sbjct:   87 QLLRRGQAYYCYCSREELDAMREQQRAAGLKPRYDGRWRDSREEPPAGVKPVVRLKNPLDGEVTFKDLIKGEITVANSELDDLVLLRGDGVPTYNFGVVIDDLDMNITHVIRGDDHVNNTPRQINILKALGAPLPQYAHVPMILGADGERLSKRHGAVSVMQYREDGYLPEALVNYLARLGWSHGDEEIFSREQLVEWFDLSNINRSPAKFNPEKLQWLNQQYLKTADNERLAELVKPFLAADGCDVTGGGTPDLRKVMNLLKERVNTIAELADAAVYFFRPLEPAEELRAQYFSAEAKGPILDLRTKLATLEWEGHAINDAIKASATAHGVKMPKVAMPLRVMVTGEAQTPAINAVLELLGREETLRRMDRQLEYF 463          
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Match: A0A1W6SR29_9PROT (Glutamate--tRNA ligase n=4 Tax=Nitrosospira TaxID=35798 RepID=A0A1W6SR29_9PROT)

HSP 1 Score: 541 bits (1393), Expect = 1.650e-189
Identity = 267/376 (71.01%), Postives = 311/376 (82.71%), Query Frame = 1
Query:    1 QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEKPPAGVTPVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVVDDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGERLSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLERDGGIVAGGPPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPALVDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTPSIDATLELVGREQVLARMAAQLAYFP 1128
            QLL +G+AYHCY SKEELDAMRE QRA G KPRYDGRWRDSK+ PP GV PV+R K+PL+G VT+ D VKG ITV+N ELDDLV+LR DGVPTYNFGV++DD+DM+ITHVIRGDDHVNNTPRQINI KALG  LP++AH+PMILGSDGERLSKRHGAV V+QYRDDG+LPEALVNYLARLGWSHGDEE F+REQL+EWFDL  I+ SPA+F+P+KL+WLNQQY+K AD+ RLA+L+ PFLE DG  V  GP L  V  LLKER +T+ ELADA+VYFYR +EP+ ELKTQH+T + KPALVDL +RLA  EW   AI  ++KA    H +KMPKVAMPLRVMV G A TPSI+A LEL+GRE+ L RM  +L  FP
Sbjct:   87 QLLRSGNAYHCYASKEELDAMREQQRAAGLKPRYDGRWRDSKQAPPDGVKPVVRLKNPLDGAVTFRDLVKGEITVANSELDDLVLLRADGVPTYNFGVMIDDLDMNITHVIRGDDHVNNTPRQINILKALGAPLPQYAHVPMILGSDGERLSKRHGAVSVVQYRDDGYLPEALVNYLARLGWSHGDEEIFSREQLVEWFDLASINCSPAKFNPEKLQWLNQQYLKTADDARLAKLVMPFLETDGCNVDVGPDLPKVTNLLKERVSTVAELADAAVYFYRFLEPAEELKTQHFTVEAKPALVDLMERLAIIEWDSHAIQDTIKAAATAHGMKMPKVAMPLRVMVTGEAQTPSINAVLELLGREETLKRMHERLGCFP 462          
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Match: A0A1F4BNI3_9PROT (Glutamate--tRNA ligase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BNI3_9PROT)

HSP 1 Score: 538 bits (1387), Expect = 1.550e-188
Identity = 261/381 (68.50%), Postives = 311/381 (81.63%), Query Frame = 1
Query:    1 QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEK-----PPAGVTPVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVVDDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGERLSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLERDGGIVAGGPPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPALVDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTPSIDATLELVGREQVLARMAAQLAYFP 1128
            QL+    AY+CY S+EELDA+R  QRARGEKPRYDGRWR    K     PP G  PV+RF++P  G+VT+ D VKGPITV+N E+DDLV+LRGDG+PTYNFGVVVDDIDM ITHVIRGDDHVNNTPRQ+NIY+ALG  LP+FAH+PMILG+DGERLSKRHGAV V+QYRDDG+LPEALVN LARLGWSHGDEE F+R QL+EWFDL HIS+SPARFDP K  WLN QY+K AD+ RLA L +PFL ++G     GPPL  V  LLKER NT+ ELADA+VYFYR +EPS +LK QHY+ D+KPALVDL+++L+  EW+R  I+ ++KAV+A H +KMPK+AMPLRVMV+G A TPS+DA LEL+GR++VLARM  QL  FP
Sbjct:   86 QLIKKDQAYYCYASREELDALRGQQRARGEKPRYDGRWRPESAKRLGLKPPPGAQPVVRFRNPDHGEVTFRDLVKGPITVANGEMDDLVLLRGDGIPTYNFGVVVDDIDMAITHVIRGDDHVNNTPRQVNIYRALGATLPQFAHVPMILGADGERLSKRHGAVSVLQYRDDGYLPEALVNCLARLGWSHGDEEMFSRGQLVEWFDLEHISQSPARFDPGKAAWLNAQYLKSADDGRLAALAEPFLAKNGCDTKRGPPLARVAGLLKERVNTVEELADAAVYFYRPLEPSDDLKRQHYSPDVKPALVDLKEQLSKAEWTRERISEAIKAVVAAHQLKMPKIAMPLRVMVSGVAQTPSVDAVLELIGRDEVLARMERQLQAFP 466          
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Match: A0A1H8R4X6_9PROT (Glutamate--tRNA ligase n=9 Tax=Proteobacteria TaxID=1224 RepID=A0A1H8R4X6_9PROT)

HSP 1 Score: 537 bits (1383), Expect = 5.670e-188
Identity = 255/377 (67.64%), Postives = 308/377 (81.70%), Query Frame = 1
Query:    1 QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEKPPAGVTPVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVVDDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGERLSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLERDGGIVAGGPPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPALVDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTPSIDATLELVGREQVLARMAAQLAYFPG 1131
            QLL    AY+CY +KEEL+ MRE Q A G KPRYDGRWRDSK+ PPAG+ PVLRFK+PL+G VT+ND++KG ITV+N ELDDLV+LRGDGVPTYNF VV+DD+DM+ITHVIRGDDHVNNTPRQINI KALG  LP++AH+PMILG++GERLSKRHGAV VMQY +DG+LPEAL+NYLARLGWSHGDEE F+R+QL+EWFDL  IS+SPA+F+P+KL W+NQQY+K ADN RLAEL+ PFL +D  +  GGP LT V+ LLKER NT+ ELADA+VYFYR +EP  ELK QH+TA+ KP +  L +R    EW+R  I+  +K    +H+VK+PK+AMPLRVMV G  HTPSIDA L L+GRE+ LARM + L  FPG
Sbjct:   88 QLLQNNQAYYCYATKEELEEMREQQLAAGLKPRYDGRWRDSKQTPPAGIKPVLRFKNPLDGYVTFNDQIKGKITVANSELDDLVLLRGDGVPTYNFSVVIDDLDMNITHVIRGDDHVNNTPRQINILKALGATLPEYAHVPMILGANGERLSKRHGAVSVMQYHEDGYLPEALLNYLARLGWSHGDEEIFSRDQLVEWFDLSAISRSPAKFNPEKLHWINQQYLKTADNTRLAELVTPFLAKDNCLTDGGPDLTQVVDLLKERVNTIEELADAAVYFYRPLEPDDELKAQHFTAETKPIMTGLLERFRHIEWTREVIHQEIKTAAKEHDVKLPKIAMPLRVMVTGEVHTPSIDAVLALLGREETLARMNSHLGSFPG 464          
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Match: A0A6L9L2A1_9PROT (Glutamate--tRNA ligase (Fragment) n=1 Tax=Ferrovum sp. TaxID=2609467 RepID=A0A6L9L2A1_9PROT)

HSP 1 Score: 531 bits (1367), Expect = 5.910e-186
Identity = 260/374 (69.52%), Postives = 307/374 (82.09%), Query Frame = 1
Query:    1 QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEKPPAGVTPVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVVDDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGERLSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLE-RDGGIVAGGPPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPALVDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTPSIDATLELVGREQVLARMAAQLA 1119
            QLL AGHAY+CY SKEEL+ +RE QRARGEKPRYDGRWRDSK  PPAGV PV+RFK+P  G++T+ND VKGPITV+N ELDDLV++R DGVPTYNFGVVVDD+DM+ITHVIRGDDHVNNTPRQINI +ALG  +P+FAH+PMILGSDGERLSKRHGAV VMQYRD+G+LPEALVNYLARLGWSHGDEE FTREQL+ WFDLGHIS+SPARF+P+KL WLNQQY+K  D+ RL+EL++P LE R+    +  P L  V+ALLK RAN + E+ADA+VYFYR + PSAELKT H T  I P L  L +RLA  EW+   I A +K V A H +KM +V +P+RV V GTA TPS+DATL L+GR+ V+AR+ AQ A
Sbjct:   64 QLLQAGHAYYCYASKEELETLREGQRARGEKPRYDGRWRDSKATPPAGVKPVIRFKTPHTGEITFNDLVKGPITVANSELDDLVLMRADGVPTYNFGVVVDDLDMNITHVIRGDDHVNNTPRQINIMQALGATIPEFAHVPMILGSDGERLSKRHGAVSVMQYRDEGYLPEALVNYLARLGWSHGDEEMFTREQLVAWFDLGHISRSPARFNPEKLDWLNQQYLKSVDDGRLSELVRPLLEVRNATPGSNSPDLRAVVALLKSRANQIPEIADAAVYFYRTLHPSAELKTLHLTEAILPVLKALTERLATVEWTVQDIGALLKTVAADHGIKMGQVGIPVRVAVCGTAQTPSLDATLHLLGRDTVIARLQAQTA 437          
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Match: A0A4P5UEY8_9PROT (Glutamate--tRNA ligase n=1 Tax=Nitrosomonadaceae bacterium TaxID=2026767 RepID=A0A4P5UEY8_9PROT)

HSP 1 Score: 531 bits (1368), Expect = 1.040e-185
Identity = 257/376 (68.35%), Postives = 306/376 (81.38%), Query Frame = 1
Query:    1 QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEKPPAGVTPVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVVDDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGERLSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLERDGGIVAGGPPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPALVDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTPSIDATLELVGREQVLARMAAQLAYFP 1128
            QLL  G+AYHCY SKEELD MRE QRA G KPRYDGRWRDSK+ PP+GV PV+R K+P +G V + D VKG I VSN+ELDDLV+LR DGVPTYNFGVV+DD+DM+I+H+IRGDDHVNNTPRQINI KALG  LP++AH+PMILGSDGERLSKRHGAV VMQY +DG+LPEAL+NYLARLGWSHGDEE F+ EQ+IEWFDL  I+ +PA+F+P+KL WLNQQY+K ADN RLAEL+ PFLE DG   A GP L  V+ LLKER NTL ELADA+VYF+R +EPS ELK  H++++++PA+VDL  +L   EW R  I+ S+KA   +H +KMPKVAMPLRVMV G A TPSIDA LEL+G+E+ L RM  +L  FP
Sbjct:   87 QLLRTGNAYHCYASKEELDVMREQQRAAGLKPRYDGRWRDSKKTPPSGVKPVVRIKNPSDGHVVFEDLVKGRIVVSNNELDDLVLLRADGVPTYNFGVVIDDLDMNISHIIRGDDHVNNTPRQINILKALGGALPQYAHVPMILGSDGERLSKRHGAVSVMQYLEDGYLPEALLNYLARLGWSHGDEEIFSSEQMIEWFDLASINCAPAKFNPEKLSWLNQQYLKTADNTRLAELVTPFLETDGCNTATGPDLLNVVGLLKERVNTLAELADAAVYFFRPLEPSNELKVLHFSSEVRPAMVDLMGQLTSAEWGRQIIHDSIKAAATKHGLKMPKVAMPLRVMVTGEAQTPSIDAVLELLGKEETLKRMNNRLTDFP 462          
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Match: A0A3N5MZ84_9PROT (Glutamate--tRNA ligase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5MZ84_9PROT)

HSP 1 Score: 529 bits (1362), Expect = 8.490e-185
Identity = 258/376 (68.62%), Postives = 307/376 (81.65%), Query Frame = 1
Query:    1 QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEKPPAGVTPVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVVDDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGERLSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFDLGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLERDGGIVAGGPPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPALVDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTPSIDATLELVGREQVLARMAAQLAYFP 1128
            +L+  G AY+CY SK ELDAMREAQRARGEKPRYDGRWRDS E PPAGV PV+RFK+P EG+V ++D VKG I VSN ELDDLVILR DGVPTYNFGVVVDD+DM+ITHVIRGDDHVNNTPRQ+NI++ALG  LP FAH+PMILG+DGERLSKRHGAV V QYRD G+LPEA +NYLARLGWSHGDEE FT  Q++ WFDL HISKSPARF+P+KL W+NQQY+K AD+ RLAEL +PFL  DG  +  GP L  V++LLKER +T+ ELADA+VYFYR + PS  L+ QHYTA+I+  LV L+  L    W+R  INA++K+V+AQH +K+P++AMPLRVMV G   TPSIDA L L+GR++VL RM +QL  FP
Sbjct:   87 RLIRDGKAYYCYASKHELDAMREAQRARGEKPRYDGRWRDSTEAPPAGVKPVVRFKTPAEGEVAFDDLVKGRIVVSNAELDDLVILRADGVPTYNFGVVVDDLDMNITHVIRGDDHVNNTPRQVNIFRALGGELPAFAHVPMILGADGERLSKRHGAVSVTQYRDSGYLPEATLNYLARLGWSHGDEEIFTMPQMVGWFDLAHISKSPARFNPEKLAWINQQYLKTADDARLAELARPFLAADGCDLDRGPDLASVVSLLKERVSTVEELADAAVYFYRPLTPSEALRAQHYTAEIRTPLVQLRDSLQTIAWTRDEINATLKSVVAQHKLKLPRIAMPLRVMVTGEPQTPSIDAVLALIGRDEVLHRMNSQLELFP 462          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15429.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2YAL2_9PROT2.460e-20273.49Glutamate--tRNA ligase n=1 Tax=Betaproteobacteria ... [more]
A0A1F4DNJ0_9PROT1.250e-19973.04Glutamate--tRNA ligase n=1 Tax=Betaproteobacteria ... [more]
A0A1M7C5G8_9PROT7.340e-19671.69Glutamate--tRNA ligase n=6 Tax=Nitrosospira TaxID=... [more]
SYE_NITMU1.250e-18969.76Glutamate--tRNA ligase n=10 Tax=Nitrosomonadales T... [more]
A0A1W6SR29_9PROT1.650e-18971.01Glutamate--tRNA ligase n=4 Tax=Nitrosospira TaxID=... [more]
A0A1F4BNI3_9PROT1.550e-18868.50Glutamate--tRNA ligase n=1 Tax=Betaproteobacteria ... [more]
A0A1H8R4X6_9PROT5.670e-18867.64Glutamate--tRNA ligase n=9 Tax=Proteobacteria TaxI... [more]
A0A6L9L2A1_9PROT5.910e-18669.52Glutamate--tRNA ligase (Fragment) n=1 Tax=Ferrovum... [more]
A0A4P5UEY8_9PROT1.040e-18568.35Glutamate--tRNA ligase n=1 Tax=Nitrosomonadaceae b... [more]
A0A3N5MZ84_9PROT8.490e-18568.62Glutamate--tRNA ligase n=1 Tax=Betaproteobacteria ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15429contigP-wetherbeei_contig15429:2..1135 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1266925.JHVX01000002_gene977
Preferred namegltX
PFAMstRNA-synt_1c
Model size1134
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00055,RC00523
KEGG koko:K01885
KEGG ReactionR05578
KEGG Pathwayko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120
KEGG ModuleM00121,M00359,M00360
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.77e-193
EggNOG OGsCOG0008@1|root,COG0008@2|Bacteria,1MUCR@1224|Proteobacteria,2VH5S@28216|Betaproteobacteria,3720W@32003|Nitrosomonadales
EC6.1.1.17
DescriptionCatalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Cds size1134
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186055.724458-CDS-P-wetherbeei_contig15429:1..11351683186055.724458-CDS-P-wetherbeei_contig15429:1..1135Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15429 2..1135 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15429.1.1prot_P-wetherbeei_contig15429.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15429 2..1135 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15429.1.1

>prot_P-wetherbeei_contig15429.1.1 ID=prot_P-wetherbeei_contig15429.1.1|Name=mRNA_P-wetherbeei_contig15429.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=378bp
QLLDAGHAYHCYCSKEELDAMREAQRARGEKPRYDGRWRDSKEKPPAGVT
PVLRFKSPLEGDVTWNDEVKGPITVSNHELDDLVILRGDGVPTYNFGVVV
DDIDMDITHVIRGDDHVNNTPRQINIYKALGKILPKFAHLPMILGSDGER
LSKRHGAVGVMQYRDDGFLPEALVNYLARLGWSHGDEEKFTREQLIEWFD
LGHISKSPARFDPDKLRWLNQQYIKEADNQRLAELMQPFLERDGGIVAGG
PPLTGVIALLKERANTLVELADASVYFYRVIEPSAELKTQHYTADIKPAL
VDLQQRLAGGEWSRAAINASVKAVLAQHNVKMPKVAMPLRVMVAGTAHTP
SIDATLELVGREQVLARMAAQLAYFPG*
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mRNA from alignment at P-wetherbeei_contig15429:2..1135+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15429.1.1 ID=mRNA_P-wetherbeei_contig15429.1.1|Name=mRNA_P-wetherbeei_contig15429.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1134bp|location=Sequence derived from alignment at P-wetherbeei_contig15429:2..1135+ (Phaeothamnion wetherbeei SAG_119_79)
CAGTTGCTCGATGCCGGCCACGCGTATCACTGCTATTGCTCGAAGGAAGA ACTCGATGCGATGCGCGAAGCACAGCGCGCGCGCGGCGAGAAGCCGCGTT ATGACGGGCGCTGGCGCGATTCGAAAGAAAAACCGCCCGCCGGCGTGACG CCAGTGCTGCGCTTCAAGTCGCCGCTCGAGGGCGACGTGACGTGGAACGA CGAAGTCAAGGGGCCGATTACGGTCAGCAACCATGAACTCGACGATCTCG TTATCCTGCGCGGCGACGGCGTGCCAACCTATAACTTTGGTGTCGTGGTT GACGACATCGACATGGACATCACGCATGTGATTCGCGGCGACGACCACGT CAACAACACGCCGCGCCAGATCAACATCTACAAGGCGCTCGGCAAAATCC TGCCGAAGTTCGCGCACCTGCCGATGATATTGGGCAGCGACGGTGAACGG CTGTCGAAGCGGCATGGCGCGGTGGGCGTGATGCAATACCGCGACGACGG ATTCTTGCCGGAAGCGCTGGTGAATTACCTCGCACGGCTCGGCTGGTCGC ACGGCGATGAAGAGAAATTCACGCGCGAGCAGTTGATCGAGTGGTTCGAC CTCGGGCACATCAGCAAATCGCCGGCGCGTTTCGATCCGGACAAGCTGCG GTGGCTCAACCAGCAGTACATCAAAGAGGCCGACAACCAGCGGCTCGCGG AGTTGATGCAGCCGTTTCTGGAAAGGGACGGCGGCATAGTTGCAGGCGGG CCGCCGCTGACGGGCGTGATTGCATTGCTCAAAGAGCGTGCCAATACGCT GGTTGAACTTGCGGATGCGTCGGTTTATTTCTACCGCGTCATCGAGCCGT CAGCCGAGCTCAAGACCCAGCATTACACGGCCGACATCAAGCCCGCGCTG GTCGATCTTCAACAGCGGCTTGCCGGTGGCGAGTGGAGCCGCGCAGCGAT CAACGCATCAGTCAAAGCGGTGCTTGCGCAGCACAACGTCAAAATGCCGA AAGTCGCAATGCCGCTGCGCGTGATGGTTGCCGGCACCGCCCATACACCG TCCATCGACGCCACGCTGGAGCTCGTCGGCCGCGAACAGGTTTTGGCGCG CATGGCGGCGCAGCTCGCGTATTTTCCAGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15429:2..1135+

>mRNA_P-wetherbeei_contig15429.1.1 ID=mRNA_P-wetherbeei_contig15429.1.1|Name=mRNA_P-wetherbeei_contig15429.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1134bp|location=Sequence derived from alignment at P-wetherbeei_contig15429:2..1135+ (Phaeothamnion wetherbeei SAG_119_79)
CAGTTGCTCGATGCCGGCCACGCGTATCACTGCTATTGCTCGAAGGAAGA
ACTCGATGCGATGCGCGAAGCACAGCGCGCGCGCGGCGAGAAGCCGCGTT
ATGACGGGCGCTGGCGCGATTCGAAAGAAAAACCGCCCGCCGGCGTGACG
CCAGTGCTGCGCTTCAAGTCGCCGCTCGAGGGCGACGTGACGTGGAACGA
CGAAGTCAAGGGGCCGATTACGGTCAGCAACCATGAACTCGACGATCTCG
TTATCCTGCGCGGCGACGGCGTGCCAACCTATAACTTTGGTGTCGTGGTT
GACGACATCGACATGGACATCACGCATGTGATTCGCGGCGACGACCACGT
CAACAACACGCCGCGCCAGATCAACATCTACAAGGCGCTCGGCAAAATCC
TGCCGAAGTTCGCGCACCTGCCGATGATATTGGGCAGCGACGGTGAACGG
CTGTCGAAGCGGCATGGCGCGGTGGGCGTGATGCAATACCGCGACGACGG
ATTCTTGCCGGAAGCGCTGGTGAATTACCTCGCACGGCTCGGCTGGTCGC
ACGGCGATGAAGAGAAATTCACGCGCGAGCAGTTGATCGAGTGGTTCGAC
CTCGGGCACATCAGCAAATCGCCGGCGCGTTTCGATCCGGACAAGCTGCG
GTGGCTCAACCAGCAGTACATCAAAGAGGCCGACAACCAGCGGCTCGCGG
AGTTGATGCAGCCGTTTCTGGAAAGGGACGGCGGCATAGTTGCAGGCGGG
CCGCCGCTGACGGGCGTGATTGCATTGCTCAAAGAGCGTGCCAATACGCT
GGTTGAACTTGCGGATGCGTCGGTTTATTTCTACCGCGTCATCGAGCCGT
CAGCCGAGCTCAAGACCCAGCATTACACGGCCGACATCAAGCCCGCGCTG
GTCGATCTTCAACAGCGGCTTGCCGGTGGCGAGTGGAGCCGCGCAGCGAT
CAACGCATCAGTCAAAGCGGTGCTTGCGCAGCACAACGTCAAAATGCCGA
AAGTCGCAATGCCGCTGCGCGTGATGGTTGCCGGCACCGCCCATACACCG
TCCATCGACGCCACGCTGGAGCTCGTCGGCCGCGAACAGGTTTTGGCGCG
CATGGCGGCGCAGCTCGCGTATTTTCCAGGCTGA
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