mRNA_P-wetherbeei_contig15249.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15249.1.2
Unique NamemRNA_P-wetherbeei_contig15249.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Match: A0A7S3VH14_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VH14_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.910e-31
Identity = 69/188 (36.70%), Postives = 97/188 (51.60%), Query Frame = 1
Query:    1 QVQTTGQLPSIRSCPSWCKEKNSVYVFGGYDGVQRMNDFFACDLDTYTWRRIPETGEAPG-TPSTRYFHSCAVHNGSMFVFGGYNGSERLNDMYEHNFASGEWTRVE-SVGEVPTGRSSLVAQXXXXXXXXXXXXXXXXXXXXXXXFRLAPLVVPPPTLVADLRGLINNRELSDVTFIVDGHPIYAKR 558
            +V  TGQLPS RSCP+W K +  VY+                         +P      G +PS RYFHSC +++  + V+GGY+GS RL+DMY  +F +  W++++ S G  P GRSSLVAQ                       FRL  + +PP TL+ D   L+NN +LSDVTF+++   I+A R
Sbjct:  266 EVHATGQLPSARSCPAWAKNETYVYIHXXXXXXXXXXXXXXXXXXXXXXXEMPSHLNGSGNSPSARYFHSCCLYSNQLIVYGGYSGSLRLSDMYAFDFDTDLWSQIDCSYGTPPKGRSSLVAQIYENSLYVGFGYDGDTVLNDFYKFRLRAIRLPPSTLLNDFSKLLNNPQLSDVTFLIEDQEIHANR 453          
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Match: A0A7S2WPN5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPN5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.630e-28
Identity = 60/143 (41.96%), Postives = 88/143 (61.54%), Query Frame = 1
Query:  151 RIPETGEAPGTPSTRYFHSCAVHNGSMFVFGGYNGSERLNDMYEHNFASGEWTR------VESVGEVPTGRSSLVAQXXXXXXXXXXXXXXXXXXXXXXXFRLAPLVVPPPTLVADLRGLINNRELSDVTFIVDGHPIYAKRV 561
            +IP  G++   PS RYFH+CA++   ++VFGGYNG+ERLND++ ++F +  W++      VE   E+P+GRSSLV+Q                       +RL P+ +P  T V D+R L+NNRELSDVTF+V+G  +YA R+
Sbjct:  246 QIPCLGDS--VPSPRYFHACAMYRNKIYVFGGYNGTERLNDLFSYSFDTQRWSKIHDEAEVEMESEMPSGRSSLVSQVYGNSLVIFGGYNGQVVLNDYYEYRLEPVWIPESTYVTDMRTLVNNRELSDVTFLVEGQAVYASRI 386          
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Match: A0A2R5GK91_9STRA (Kelch domain-containing protein 10 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GK91_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.920e-20
Identity = 72/133 (54.14%), Postives = 94/133 (70.68%), Query Frame = 1
Query:  160 ETGEAPGTPSTRYFHSCAVHNGSMFVFGGYNGSERLNDMYEHNFASGEWTRVESVGEVPTGRSSLVAQXXXXXXXXXXXXXXXXXXXXXXXFRLAPLVVPPPTLVADLRGLINNRELSDVTFIVDGHPIYAKR 558
            +T +    P  RYFH+C +H    +VFGGY G++RLNDM++ +F +  W +++  GEVP+GRSSLVA XXXXXXXXXXXXXXXXXXXXXXX     + V PP L +DL  LI++   SDVTF+V+  P+ A R
Sbjct:  256 KTADEGYRPIGRYFHACGIHGDLFYVFGGYQGAQRLNDMHQFSFTTRTWRQLKITGEVPSGRSSLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXLSINVEPPRLTSDLAKLIDHELFSDVTFMVENRPVRAVR 388          
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Match: A0A4D9CMR4_9STRA (BTB domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMR4_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.210e-19
Identity = 59/189 (31.22%), Postives = 92/189 (48.68%), Query Frame = 1
Query:   16 GQLPSIRSCPSWCKEKNSVYVFGGYDGVQRMNDFFACDLDTYTWRRIPETGEAPGTPST-RYFHSCAVHNGSMFVFGGYNGSERLNDMYEHNFASGEWTRVESV--GEVPTGRSSLVAQXXXXXXXXXXXXXXXXXXXXXXXFRLAPLV----VPPPTLVADLRGLINNRELSDVTFIVDGHPIYAKRV 561
            G++P  R   + C + + + +FGG+DG Q +ND       + TW  +  +  AP  P   R  HS  +H+ SM++FGG  G+  ++D++E N    +W  +       +P  R   VA                        F   P +    VP PTL+ DLRGL+N+  LSDVTF+V+G P++A +V
Sbjct:  374 GKVPRPRYRATACVKNDDLILFGGHDGTQHLNDVSLFHFPSATWTLLDLSPSAPYPPPLPRDSHSAVIHHESMYIFGGSTGNA-MDDLHELNLEEKKWRPISPPPGSLMPGQRFCHVACVWKHRMVVFGGYDGAQRLNDFWAFDFGPALLACQVPEPTLLPDLRGLVNSPTLSDVTFLVEGRPVHAHKV 561          
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Match: A0A662YHD0_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YHD0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.920e-19
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 1
Query:    1 QVQTTGQLPSIRSCPSWCKEKNSVYVFGGYDGVQR--MNDFFACDLDTYTWRRIPETGEAPGTPSTRYFHSCAVHNGSMFVFGGYNGSERLNDMYEHNFASGEWTRVESVGEVPTGR 345
            QVQT G LP  RS       +N +++FGGYDG      ND F  + D+  W ++P   E    P  R  H   +H+ S+++FGGYNGS R ND+  ++  +  W+++++ G VP+ R
Sbjct:   35 QVQTRGSLPPRRSGALGVVHENEMFIFGGYDGRDGNYFNDLFYFNFDSQRWDQMPSVAE--DRPEPRTDHIMVLHSSSIYIFGGYNGSSRFNDLCGYDIVAKRWSQLQTAGVVPSRR 149          
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Match: A0A812VRF5_9DINO (LZTR1 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812VRF5_9DINO)

HSP 1 Score: 94.0 bits (232), Expect = 6.370e-19
Identity = 62/191 (32.46%), Postives = 90/191 (47.12%), Query Frame = 1
Query:    4 VQTTGQLP--SIRSCPSWCKEKNSVYVFGGYDGVQRMNDFFACDLDTYTW---RRIPETGEAPGTPSTRYFHSCAVHNGSMFVFGGYNGSERLNDMYEHNFASGEWTRVESVGEVPTGRSSLVAQXXXXXXXXXXXXXXXXXXXXXXXFRLAPLVVPPPTLVADLRGLINNRELSDVTFIVDGHPIYAKRV 561
            V+TTGQ+P  S R   S     +S+Y+FGG  G  R ND +A   +T  W   R  P   +    P  R+ H+C V+N S++VFGGY+G +RLND ++   A    T V                                            + +P  +LV+DLR  +N+ +LSDVTFIV+G P+YA ++
Sbjct: 1527 VETTGQVPPPSPRDSHSAVICGDSMYLFGGSTGSAR-NDLYAFSFETDQWTEVRTTPGATQKSNVPCPRFCHTCDVYNNSLYVFGGYDGQQRLNDFWQFKLA----TEVN-------------------------------------------IDIPSSSLVSDLREFLNDAKLSDVTFIVEGKPVYAHKL 1669          
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Match: A0A662WGB6_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGB6_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 9.820e-19
Identity = 44/117 (37.61%), Postives = 66/117 (56.41%), Query Frame = 1
Query:    1 QVQTTGQLPSIRSCPSWCKEKNSVYVFGGYDGVQR--MNDFFACDLDTYTWRRIPETGEAPGTPSTRYFHSCAVHNGSMFVFGGYNGSERLNDMYEHNFASGEWTRVESVGEVPTGR 345
            QVQT G LP  RS       +N +++FGGYDG      ND F  + D+  W ++P   E    P  R  H   +H+ S+++FGGYNGS R ND+  ++  +  W+R+++ G VP+ R
Sbjct:  107 QVQTRGSLPPRRSGALGVVHENEMFIFGGYDGRDGNYFNDLFYFNFDSQRWDQMPSVAE--DRPEPRTDHIMVLHSSSIYIFGGYNGSSRFNDLCGYDIVAKRWSRLQTGGVVPSRR 221          
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Match: B9Q0M8_TOXGV (Leucine zipper-like transcriptional regulator n=16 Tax=Toxoplasma gondii TaxID=5811 RepID=B9Q0M8_TOXGV)

HSP 1 Score: 91.7 bits (226), Expect = 3.720e-18
Identity = 72/125 (57.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query:  163 TGEAPGTPSTRYFHSCAVHNGSMFVFGGYNGSERLNDMYEHNFASGEWTRVESVGEVPTGRSSLVAQXXXXXXXXXXXXXXXXXXXXXXXFRLAPLVVPPPTLVADLRGLINNRELSDVTFIVDG 537
            +G + G PS RYFH+ A H   +++FGGYNG ERLND+Y  N  + EW  VE + + PTGRSS+   XXXXXXXXXXXXXXXXXXXXXXX +   + VPP T +ADLR L++    SDVTF V+G
Sbjct:  504 SGSSTGAPSARYFHAAAAHGNCLYIFGGYNGQERLNDLYVFNLDTHEWQVVEGL-DTPTGRSSMXXXXXXXXXXXXXXXXXXXXXXXXXXXKFPTVAVPPSTFLADLRRLLSPPN-SDVTFTVEG 626          
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Match: A0A0G4EWQ1_VITBC (RING-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EWQ1_VITBC)

HSP 1 Score: 90.9 bits (224), Expect = 6.820e-18
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 1
Query:    4 VQTTGQLPSIRSCPSWCKEKNSVYVFGGYDGVQRMNDFFACDLDTYTWRRIPETGE-APGTPSTRYFHSCAVHNGSMFVFGGYNGSERLNDMYEHNFASGEWTRVESVGE-VPTGR 345
            V+T+G  P  R+  S   + N + VFGG+DG  R  D    DL+ + W + PE G  A   P  R+ H+  ++N SMF+FGG+NG E L+D+YE +  + +W  V + G  VP  R
Sbjct:  487 VRTSGDDPPARTDHSCVVQNNRMLVFGGFDGRVRFQDLQMLDLEQHRWEQPPEAGAMATPPPMGRFGHTAVIYNNSMFIFGGWNGHETLDDLYEFSLGTFQWYNVPNRGRNVPKSR 602          
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Match: A0A3R7JVC7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JVC7_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.360e-17
Identity = 42/123 (34.15%), Postives = 67/123 (54.47%), Query Frame = 1
Query:    7 QTTGQLPSI-------RSCPSWCKEKNSVYVFGGYDGVQRMNDFFACDLDTYTWRRIPETGEAPGTPSTRYFHSCAVHNGS--MFVFGGYNGSERLNDMYEHNFASGEWTRVESVGEVPTGRS 348
            Q   Q+PS+       R+        +S+Y+FGGY+G  R ND    D++   W R+   G     PS R+ HS  VH  +  + +FGG++G + LND++E+NF + EW ++E+ G  P  R+
Sbjct:  141 QRWNQMPSVVEDRPEARTDHIMVLHSSSIYIFGGYNGSSRFNDLCGYDIEAKRWNRLQAAG---AVPSRRFGHSGVVHESTNRLIIFGGWDGRDTLNDLFEYNFVTNEWRKLETSGNSPPHRT 260          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15249.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3VH14_9STRA2.910e-3136.70Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2WPN5_9STRA1.630e-2841.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2R5GK91_9STRA7.920e-2054.14Kelch domain-containing protein 10 n=1 Tax=Hondaea... [more]
A0A4D9CMR4_9STRA1.210e-1931.22BTB domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A662YHD0_9STRA2.920e-1936.75Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A812VRF5_9DINO6.370e-1932.46LZTR1 protein n=1 Tax=Symbiodinium sp. CCMP2456 Ta... [more]
A0A662WGB6_9STRA9.820e-1937.61Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
B9Q0M8_TOXGV3.720e-1857.60Leucine zipper-like transcriptional regulator n=16... [more]
A0A0G4EWQ1_VITBC6.820e-1838.79RING-type domain-containing protein n=1 Tax=Vitrel... [more]
A0A3R7JVC7_9STRA1.360e-1734.15Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15249contigP-wetherbeei_contig15249:358..1451 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog159749.K0RFJ6
PFAMsBTB
Model size561
Max annot lvl2759|Eukaryota
KEGG koko:K10357,ko:K10523
KEGG Pathwayko04340,ko04341,map04340,map04341
KEGG ModuleM00384
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0019005,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0030162,GO:0030163,GO:0031461,GO:0031625,GO:0032991,GO:0043161,GO:0043170,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044424,GO:0044464,GO:0050789,GO:0051171,GO:0051246,GO:0051603,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1990234
Exons3
Evalue3.37e-25
EggNOG OGsKOG1987@1|root,KOG1987@2759|Eukaryota
Descriptionprotein modification by small protein conjugation or removal
Cds size561
COG categoryS
BRITEko00000,ko00001,ko00002,ko03019,ko03029,ko04121,ko04131,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186049.5638466-CDS-P-wetherbeei_contig15249:357..5881683186049.5638466-CDS-P-wetherbeei_contig15249:357..588Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15249 358..588 -
1683186049.5758746-CDS-P-wetherbeei_contig15249:783..9421683186049.5758746-CDS-P-wetherbeei_contig15249:783..942Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15249 784..942 -
1683186049.5855713-CDS-P-wetherbeei_contig15249:1280..14511683186049.5855713-CDS-P-wetherbeei_contig15249:1280..1451Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15249 1281..1451 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15249.1.2prot_P-wetherbeei_contig15249.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15249 358..1451 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15249.1.2

>prot_P-wetherbeei_contig15249.1.2 ID=prot_P-wetherbeei_contig15249.1.2|Name=mRNA_P-wetherbeei_contig15249.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp
QVQTTGQLPSIRSCPSWCKEKNSVYVFGGYDGVQRMNDFFACDLDTYTWR
RIPETGEAPGTPSTRYFHSCAVHNGSMFVFGGYNGSERLNDMYEHNFASG
EWTRVESVGEVPTGRSSLVAQVHGNSLYIFGGYNGTVVLNDFYEFRLAPL
VVPPPTLVADLRGLINNRELSDVTFIVDGHPIYAKRV
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mRNA from alignment at P-wetherbeei_contig15249:358..1451-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15249.1.2 ID=mRNA_P-wetherbeei_contig15249.1.2|Name=mRNA_P-wetherbeei_contig15249.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1094bp|location=Sequence derived from alignment at P-wetherbeei_contig15249:358..1451- (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGCAGACGACGGGGCAGCTGCCGTCGATCCGGTCGTGCCCGTCGTG GTGCAAGGAGAAGAACTCGGTGTACGTCTTTGGGGGCTATGATGGTGTGC AGCGCATGAACGACTTCTTTGCCTGCGACCTCGACACGTACACCTGGCGG AGGATCCCCGAGACCGGCGAGGTCAGTCTGTCTGCGTGCATGCAGTCTTC CGTCCGCATAAAGCTGTTAGTTGAGACGGCATCAGTTTAAACTGCTGTTC GAGTGCTCTTCTGATTGTCTTCGCCGACCACAGCGTTTGCGGTCACGTTT CGGGTCGAGCGGCGCCTTTCCTTTTGTGTCGCTACCTTTTGCTCGGTGCC GCGGACCTAAGCAGCTTTCTTCCATTTGAACGGGCCCGTTCAATCACCGT CCGCCTTTGTTGGCGCCTTGCATTTGCTTTCTTCGCCATGTTTCCTCCGC CTGCCTCGCTTTTCCTCCTTCTGCTGGGGCATGGTATGCGGCACGGCACA TGGTAATAGGCCCCGGGCACGCCAAGCACGCGGTATTTCCACTCGTGCGC AGTGCACAATGGGTCCATGTTTGTGTTCGGCGGTTACAATGGCTCGGAAC GCCTCAACGACATGTACGAGCACAACTTCGCCTCAGGGGAGTGGACGCGC GTAGAGTCGGTCGGAGAGGTAAGAAAGAGGAGACATGATCACGTGTTGGA AGTTGAGTTTCAAGCAATTTTAAATGCGGTTCCGGTGACGGCTTTGAAAT CACAAGCACCGATGGCGGATGCGTCATGCGCCACTGGATGGTGGCTCTCT GGTCCTTTCCCAATGAACTTTTTGTTCTTTCTTCCACGCTCGTATGACAA AACGCGAATCCAGGTGCCGACGGGGCGGAGCAGCCTCGTGGCGCAGGTGC ACGGCAACTCCCTGTACATCTTCGGCGGGTACAACGGCACGGTGGTGCTC AACGACTTCTACGAGTTCCGCCTGGCGCCGCTCGTCGTGCCGCCGCCGAC GCTCGTCGCCGACCTCCGTGGGCTCATCAACAACCGCGAGTTGTCCGACG TCACCTTCATCGTCGACGGGCACCCCATCTACGCCAAGCGAGTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15249:358..1451-

>mRNA_P-wetherbeei_contig15249.1.2 ID=mRNA_P-wetherbeei_contig15249.1.2|Name=mRNA_P-wetherbeei_contig15249.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=561bp|location=Sequence derived from alignment at P-wetherbeei_contig15249:358..1451- (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGCAGACGACGGGGCAGCTGCCGTCGATCCGGTCGTGCCCGTCGTG
GTGCAAGGAGAAGAACTCGGTGTACGTCTTTGGGGGCTATGATGGTGTGC
AGCGCATGAACGACTTCTTTGCCTGCGACCTCGACACGTACACCTGGCGG
AGGATCCCCGAGACCGGCGAGGCCCCGGGCACGCCAAGCACGCGGTATTT
CCACTCGTGCGCAGTGCACAATGGGTCCATGTTTGTGTTCGGCGGTTACA
ATGGCTCGGAACGCCTCAACGACATGTACGAGCACAACTTCGCCTCAGGG
GAGTGGACGCGCGTAGAGTCGGTCGGAGAGGTGCCGACGGGGCGGAGCAG
CCTCGTGGCGCAGGTGCACGGCAACTCCCTGTACATCTTCGGCGGGTACA
ACGGCACGGTGGTGCTCAACGACTTCTACGAGTTCCGCCTGGCGCCGCTC
GTCGTGCCGCCGCCGACGCTCGTCGCCGACCTCCGTGGGCTCATCAACAA
CCGCGAGTTGTCCGACGTCACCTTCATCGTCGACGGGCACCCCATCTACG
CCAAGCGAGTT
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