mRNA_P-wetherbeei_contig15213.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A7K1BBZ5_9ACTN (PaaI family thioesterase n=2 Tax=root TaxID=1 RepID=A0A7K1BBZ5_9ACTN) HSP 1 Score: 194 bits (492), Expect = 2.290e-61 Identity = 88/132 (66.67%), Postives = 106/132 (80.30%), Query Frame = 1
Query: 1 TMPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIGIEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSIDKPVAVAQGTYVRP 396
++ + EIN FL +F GS +GCE VG GWA+A+ + LRPGGI+SGPTVF CDAALYYACFT +GIEPM LTSELSIR+LRPA+G LRARADLHQVGRR+I+G++VAWT +PVAVAQGTY+RP
Sbjct: 13 SVVSAEEINRFLEAEFPGSSSGCEAVGDGWAIAIARTDRMQLRPGGIVSGPTVFAVCDAALYYACFTRVGIEPMTLTSELSIRFLRPARGAELRARADLHQVGRRAIIGSIVAWTDDPSRPVAVAQGTYMRP 144
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A6J6QJU7_9ZZZZ (Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A6J6QJU7_9ZZZZ) HSP 1 Score: 168 bits (425), Expect = 3.980e-51 Identity = 79/132 (59.85%), Postives = 103/132 (78.03%), Query Frame = 1
Query: 1 TMPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIGIEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSIDKPVAVAQGTYVRP 396
++ +V EINAF+ +F G+ N CEE+ G AVA++ P+ +LRPG IISGPTVF CDAAL+YA + IG+EPM LTSE+SIR+LRPA+G+ +RARA L +G RSIVG+V+A+T KPVAVAQGTY+RP
Sbjct: 12 SLVSVDEINAFIGGEFGGNQNACEEMAFGMAVAVMYPSTASLRPGKIISGPTVFSICDAALFYASLSAIGMEPMTLTSEMSIRFLRPARGEVIRARARLDSLGTRSIVGSVIAYTDDESKPVAVAQGTYMRP 143
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A4V0WZS5_9ACTN (4HBT domain-containing protein n=9 Tax=root TaxID=1 RepID=A0A4V0WZS5_9ACTN) HSP 1 Score: 160 bits (405), Expect = 3.860e-48 Identity = 76/132 (57.58%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 1 TMPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIGIEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSIDKPVAVAQGTYVRP 396
++ +V E+NAF+ F G+ N CE + AVA++ P+ +LRPG IISGPTVF CDAAL+YA + G+EPM LTSE+SIR+LRPA+G+ +RARA L+ +G RSIVG+VVA+T KPVAVAQGTY RP
Sbjct: 8 SLVSVEEMNAFIGGAFGGNQNACEVMSFAMAVAVMYPSVASLRPGKIISGPTVFSICDAALFYAALSATGMEPMTLTSEMSIRFLRPARGEVIRARATLNSIGTRSIVGSVVAYTDDESKPVAVAQGTYARP 139
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: UPI000347F9B6 (PaaI family thioesterase n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000347F9B6) HSP 1 Score: 147 bits (372), Expect = 3.880e-43 Identity = 72/134 (53.73%), Postives = 92/134 (68.66%), Query Frame = 1
Query: 1 TMPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSID-KPVAVAQGTYVRP 396
T+PT ++NA + F G+GN C E+GPG+A+A +++ LRPGG +SGPT FG DAAL+Y F G IEPM +TSELSIRYLRPA+G L ARA + GRR++VGTV W + KP +VAQGTY P
Sbjct: 10 TLPTADQVNAMIEELFPGTGNTCAEIGPGFALAQRPVDDSMLRPGGFVSGPTQFGLADAALWYMVFAATGRIEPMAMTSELSIRYLRPAQGSVLWARATVESAGRRNVVGTVRVWCDDREHKPTSVAQGTYAMP 143
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A6C7E0K0_ILUCY (4HBT domain-containing protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E0K0_ILUCY) HSP 1 Score: 147 bits (371), Expect = 5.020e-43 Identity = 75/134 (55.97%), Postives = 93/134 (69.40%), Query Frame = 1
Query: 1 TMPTVSE-INAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSIDKPVAVAQGTYVRP 396
T P +E I A + R+F+G+GN C EVG +A+A + + +RPGG +SGPT FG DAAL+Y F +G IEPM +TSELSIRY+RPA GD L A+A L GRRS+VGTV WTT KP AVAQGTY+ P
Sbjct: 3 TNPVTAEAITAMIDREFSGTGNTCFEVGDDYAIARRDVHTDEIRPGGFVSGPTQFGLADAALWYVTFVGVGRIEPMAMTSELSIRYIRPAVGDVLWAKATLDVAGRRSVVGTVSIWTTDESKPSAVAQGTYMLP 136
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A6N2DQA3_9ACTN (PaaI family thioesterase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DQA3_9ACTN) HSP 1 Score: 142 bits (358), Expect = 3.290e-41 Identity = 72/124 (58.06%), Postives = 87/124 (70.16%), Query Frame = 1
Query: 31 FLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSID-KPVAVAQGTYVRP 396
+ R+F+GS N C E+G G+A+A ++ + +LRPGG ISGPT FG DAAL+Y F IG IEPM LTSELSIRYLRPA G+ L ARA L GRR++VGTV W D +P A AQGTYV P
Sbjct: 1 MVRREFSGSANECVEIGDGYALARLIASPESLRPGGFISGPTQFGLADAALWYLTFAAIGRIEPMALTSELSIRYLRPAIGEVLWARASLEAAGRRNVVGTVHLWVDDHDHRPTATAQGTYVLP 124
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A7Y1ZW90_9ACTN (PaaI family thioesterase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZW90_9ACTN) HSP 1 Score: 142 bits (358), Expect = 4.070e-41 Identity = 74/132 (56.06%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 7 PTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTS-IDKPVAVAQGTYVRP 396
PT +E+NA L F+G+GN C E+GP A+A+ ++ NLRPGG +SGPT FG DAAL+Y F +G IEPM LTSELSIR+LRPA+G L ARA L + GRR+IVG+V W DK A AQGTY P
Sbjct: 4 PTPAEVNAMLDEQFSGTGNSCAELGPTHALAVSDIDQLNLRPGGFVSGPTQFGLADAALWYLVFGALGRIEPMSLTSELSIRFLRPAQGSRLWARATLEKAGRRNIVGSVHLWCDDRTDKITATAQGTYALP 135
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A7W0R068_9ACTN (PaaI family thioesterase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0R068_9ACTN) HSP 1 Score: 138 bits (347), Expect = 1.970e-39 Identity = 75/132 (56.82%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 10 TVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTT--SIDKPVAVAQGTYVRP 396
TV +N + + F GS N C E+G G+AVA L LRPGG ISGPT FG DA L+Y F IG IEPM LTSELSIR+LRPA G+ L ARA L GRR++VGTV WT + KP A AQGTYV P
Sbjct: 5 TVDAVNEMVRQQFPGSTNECTELGDGFAVARRLITPIELRPGGYISGPTQFGLADAGLWYLVFAAIGRIEPMALTSELSIRFLRPAIGEVLWARARLDAAGRRNVVGTVRLWTDGGTESKPTATAQGTYVLP 136
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A349B1U1_9ACTN (4HBT domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B1U1_9ACTN) HSP 1 Score: 137 bits (346), Expect = 3.450e-39 Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = 1
Query: 10 TVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSI-DKPVAVAQGTYVRP 396
+++ ++A L +F G+GN C E+GP AVA + +RPGG +SGPT FG DAAL+Y F IG IEPM LTSELSIR+LRPA+G L ARA L G RSIVG+V W DKP AVAQGTYV P
Sbjct: 11 SLAGVDAMLEAEFPGTGNSCTELGPTHAVARRPVDAGAIRPGGFVSGPTQFGLADAALWYLAFGAIGRIEPMALTSELSIRFLRPAQGSMLWARATLESAGSRSIVGSVKVWCDDREDKPSAVAQGTYVLP 141
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A7V9IK79_9ACTN (PaaI family thioesterase n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9IK79_9ACTN) HSP 1 Score: 137 bits (346), Expect = 3.780e-39 Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 1 TMPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSID-KPVAVAQGTYVRP 396
T+P+ EIN F GS N C E+G +AVA ++ + +RPGG +SGP FG DAAL+Y F IG +EPM LTSELSIR+LRPA GD +RARA L RRS+VG+V W ++ +P AVAQGTY P
Sbjct: 8 TLPSPDEINEMARESFPGSPNTCLELGEDYAVAEMIVTPDMIRPGGFVSGPGQFGLADAALWYLVFAAIGRVEPMALTSELSIRFLRPAVGDRMRARAALEARSRRSVVGSVRVWAGDLEHRPTAVAQGTYALP 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15213.2.1 >prot_P-wetherbeei_contig15213.2.1 ID=prot_P-wetherbeei_contig15213.2.1|Name=mRNA_P-wetherbeei_contig15213.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp MPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPback to top mRNA from alignment at P-wetherbeei_contig15213:947..1348+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15213.2.1 ID=mRNA_P-wetherbeei_contig15213.2.1|Name=mRNA_P-wetherbeei_contig15213.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig15213:947..1348+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15213:947..1348+ >mRNA_P-wetherbeei_contig15213.2.1 ID=mRNA_P-wetherbeei_contig15213.2.1|Name=mRNA_P-wetherbeei_contig15213.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig15213:947..1348+ (Phaeothamnion wetherbeei SAG_119_79)back to top |