mRNA_P-wetherbeei_contig152.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Match: A0A835Z638_9STRA (Mitochondrial import inner membrane translocase subunit TIM23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z638_9STRA) HSP 1 Score: 187 bits (476), Expect = 6.090e-55 Identity = 105/209 (50.24%), Postives = 138/209 (66.03%), Query Frame = 2
Query: 8 MSSGGSGASSGASGDDPYKDSGSRYGRIELPNFG-SGIDLGTVAPMYGQVAD--YEPEYLDYDIKGKDLFAKCTINIGFSYLSGIGIGGAYGMLEGLRTAPSKRLRIKVNSVMNASGKRGSRLGNAGGVLSLFYTLAEHGLDRLELDQRLGGGEYINPTIAAAATGMLYKSTANPRTMLLAGAVGAASAGVYYIGKRFVGNAISAGPSR 625
MSSG +G SG + DPY D G+++GR+ELP S IDLG++A MYG YEP+YLDY+IKG+D F K T N G YL+GI GG YG+LEG RTAPS R RI+VN+++NA+GKRGSR GN VL++FYT E D LE+D ++G E+++P +A +A L+ + N RTM LAG G A G Y+G +G+ I A R
Sbjct: 1 MSSGQAGPESGDN--DPYTDPGAKFGRLELPKLNTSSIDLGSLAGMYGVQGGGAYEPDYLDYNIKGRDTFEKTTYNTGMCYLAGIIGGGGYGVLEGARTAPSSRARIRVNAILNAAGKRGSRAGNTLAVLAMFYTGFEFMFDSLEVDAKVGDAEWLHPVLAGSAAMTLFYTGKNVRTMALAGVAGGAGMGALYLGTTALGSLIGANRRR 207
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Match: A0A4D9D4E0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4E0_9STRA) HSP 1 Score: 154 bits (388), Expect = 5.360e-42 Identity = 83/175 (47.43%), Postives = 114/175 (65.14%), Query Frame = 2
Query: 59 YKDSGSRYGRIELPNFGSG-IDLGTVAPMYGQVADYEPEYLDYDIKGKDLFAKCTINIGFSYLSGIGIGGAYGMLEGLRTAPSKRLRIKVNSVMNASGKRGSRLGNAGGVLSLFYTLAEHGLDRLELDQRLGGGEYINPTIAAAATGMLYKSTANPRTMLLAGAVGAASAGVYYI 580
Y S +I+L FG G +DL TVAP+YG ++ EP+YLDYDIKG+ + + G SYL+GI GG G G +TAPS R +++NSVMN +GK GS+ GN GV +L Y+L+E LD E D+ LGG + +NP ++ A +G+LYKSTA PRT LA +G AG++Y+
Sbjct: 10 YSASDDNLPKIDL--FGGGNVDLRTVAPLYGVASEEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRTGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQAVNPVLSGAISGLLYKSTAAPRTAALASVLGGFGAGMFYV 182
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Match: W7TXH2_9STRA (Mitochondrial import inner membrane translocase subunit tim23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXH2_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.500e-41 Identity = 83/175 (47.43%), Postives = 114/175 (65.14%), Query Frame = 2
Query: 59 YKDSGSRYGRIELPNFGSG-IDLGTVAPMYGQVADYEPEYLDYDIKGKDLFAKCTINIGFSYLSGIGIGGAYGMLEGLRTAPSKRLRIKVNSVMNASGKRGSRLGNAGGVLSLFYTLAEHGLDRLELDQRLGGGEYINPTIAAAATGMLYKSTANPRTMLLAGAVGAASAGVYYI 580
Y S +I+L FG G +DL TVAP+YG ++ EP+YLDYDIKG+ + + G SYL+GI GG G G +TAPS R +++NSVMN +GK GS+ GN GV +L Y+L+E LD E D+ LGG + +NP ++ A +G+LYKSTA PRT LA +G AG++Y+
Sbjct: 76 YSASDDNLPKIDL--FGGGNVDLRTVAPLYGVASEEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRRGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQAVNPVLSGAISGLLYKSTAAPRTAALASVLGGFGAGMFYV 248
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Match: A0A6G0W8B4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W8B4_9STRA) HSP 1 Score: 148 bits (374), Expect = 8.370e-40 Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 2
Query: 53 DPYKDSGSRYGRIELPNFG--SGIDLGTVAPMYGQVADYEP---EYLDYDIKGKDLFAKCTINIGFSYLSGIGIGGAYGMLEGLRTAPSKRLRIKVNSVMNASGKRGSRLGNAGGVLSLFYTLAEHGLDRLELDQRLGGGEYINPTIAAAATGMLYKSTANPRTMLLAGAVGAASAGVYYIGKRFVGNAI 607
DPY S G + LP+FG S IDLG +AP++G ++ +YL++D +G+ + T IG +Y GI GGAYG++EG+R APS +L++++NS+ NA+G RGSR GNA G+L+L Y+ + D +ELD+ + + + P +AA ATGMLYKSTA R ML+AGA+GA G G VG I
Sbjct: 18 DPYAHS----GPLTLPDFGGNSQIDLGAIAPVFGIASNNAASAADYLEFDTRGRGFHERATHTIGMAYFGGILAGGAYGVVEGVRNAPSNKLKVRLNSLFNAAGHRGSRAGNALGILALMYSSVQELADTVELDRFVLLDKAV-PVLAAGATGMLYKSTAGTRPMLMAGAIGAVLMGTVQFGSSVVGLRI 202
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Match: A0A485KLM3_9STRA (Aste57867_8894 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLM3_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.620e-39 Identity = 85/187 (45.45%), Postives = 119/187 (63.64%), Query Frame = 2
Query: 53 DPYKDSGSRYGRIELPNFG--SGIDLGTVAPMYGQV---ADYEPEYLDYDIKGKDLFAKCTINIGFSYLSGIGIGGAYGMLEGLRTAPSKRLRIKVNSVMNASGKRGSRLGNAGGVLSLFYTLAEHGLDRLELDQRLGGGEYINPTIAAAATGMLYKSTANPRTMLLAGAVGAASAGVYYIGKRFVG 598
DPY S G + LP+FG S IDLG++AP++G + +YL+YD +G+ + T IG SY GI GG YG++EG+R APS +L++++NS+ NA+G+RGSR GNA GVL+L Y+ + D E+D+ + + + P +AA ATGMLYKSTA R ML+AGA+GA G G VG
Sbjct: 21 DPYASS----GPLTLPDFGGSSQIDLGSIAPVFGIAGTPSTSAADYLEYDTRGRGFHERATHTIGMSYFGGILAGGTYGVVEGVRNAPSTKLKVRLNSLFNAAGQRGSRAGNALGVLALMYSSVQELADVAEIDRFVIFDKAV-PILAAGATGMLYKSTAGTRPMLMAGAIGAILMGAVQFGSSVVG 202
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Match: A0A1W0ABL0_9STRA (Mitochondrial Protein Translocase (MPT) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABL0_9STRA) HSP 1 Score: 146 bits (369), Expect = 5.180e-39 Identity = 82/175 (46.86%), Postives = 114/175 (65.14%), Query Frame = 2
Query: 89 IELPNFGSG--IDLGTVAPMYGQVAD---YEPEYLDYDIKGKDLFAKCTINIGFSYLSGIGIGGAYGMLEGLRTAPSKRLRIKVNSVMNASGKRGSRLGNAGGVLSLFYTLAEHGLDRLELDQRLGGGEYINPTIAAAATGMLYKSTANPRTMLLAGAVGAASAGVYYIGKRFVG 598
LP+FGS IDLG ++P++G VAD +YL++D+KG+ + T IG SY GI GGAYG EGLR +PS++ ++++NS+ NA+G+RGSR GNA GVL+L Y+ + +D LEL+Q G + P +AA ATGM+YKSTA R M+LAG +GA G G+ G
Sbjct: 31 FSLPDFGSTSQIDLGVISPVFG-VADGATSAADYLEFDVKGRGFHERATHTIGLSYFGGILGGGAYGAAEGLRNSPSRKFKVRMNSLFNAAGQRGSRAGNALGVLALMYSGCQEAVDTLELEQ-YGVFDKALPIVAAGATGMIYKSTAGTRPMVLAGVIGALFMGAIQFGENVTG 203
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Match: D7G276_ECTSI (Mitochondrial import inner membrane translocase subunit TIM23 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G276_ECTSI) HSP 1 Score: 146 bits (369), Expect = 5.180e-39 Identity = 84/194 (43.30%), Postives = 118/194 (60.82%), Query Frame = 2
Query: 53 DPYKDSGSRYGRIELPNFGSGIDLGTVAPMYGQVAD-YEPEYLDYDIKGKDLFAKCTINIGFSYLSGIGIGGAYGMLEGLRTAPSKRLRIKVNSVMNASGKRGSRLGNAGGVLSLFYTLAEHGLDRLELDQ-----RLGGGEYINPTIAAAATGMLYKSTANPRTMLLAGAVGAASAGVYYIGKRFVGNAISAG 616
DPY D+ ++YG ++LP +DL + MYG A EPEYLDY+IKG+ + + N G Y++GI GGA G+ EG AP++R R+ +NS+MN +GK+GS GN VL+ +YT AE LD E+DQ + G GE INP +A A+TG+LYKS+A PR L+A G + GV Y + + + G
Sbjct: 14 DPYSDASAKYGPLKLPEL-QNVDL---SKMYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQG 203
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Match: A0A024TNP3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TNP3_9STRA) HSP 1 Score: 144 bits (363), Expect = 4.000e-38 Identity = 78/176 (44.32%), Postives = 115/176 (65.34%), Query Frame = 2
Query: 83 GRIELPNFG--SGIDLGTVAPMYGQVADYEP---EYLDYDIKGKDLFAKCTINIGFSYLSGIGIGGAYGMLEGLRTAPSKRLRIKVNSVMNASGKRGSRLGNAGGVLSLFYTLAEHGLDRLELDQRLGGGEYINPTIAAAATGMLYKSTANPRTMLLAGAVGAASAGVYYIGKRFV 595
G + LP+FG S IDLG +AP++G P +YL+YD +G+ + T IG Y GI GGA G++EG+R APS +L++++NS+ NA+G+RGSR GNA G+L+L Y+ + D +EL++ + + + P +AA ATGMLYKSTA R ML+AGA+G+ G + G F+
Sbjct: 30 GPLTLPDFGGSSNIDLGAIAPVFGIAGTTAPSAADYLEYDTRGRGFHERATHIIGMGYFGGILGGGAIGVVEGIRNAPSSKLKVRLNSLFNAAGQRGSRAGNALGILALMYSSIQELADTVELERFVLVDKAV-PVLAAGATGMLYKSTAGTRPMLMAGAIGSVVMGAFQFGSSFL 204
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Match: A0A1V9YPR3_9STRA (Mitochondrial Protein Translocase (MPT) Family n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YPR3_9STRA) HSP 1 Score: 141 bits (355), Expect = 5.590e-37 Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 2
Query: 110 SGIDLGTVAPMYGQV--ADYEPEYLDYDIKGKDLFAKCTINIGFSYLSGIGIGGAYGMLEGLRTAPSKRLRIKVNSVMNASGKRGSRLGNAGGVLSLFYTLAEHGLDRLELDQRLGGGEYINPTIAAAATGMLYKSTANPRTMLLAGAVGAASAGVYYIGKRFVG 598
S +DLG ++P++G A +YL+YD+KG+ + T IG SY GI GGAYG LEG+R +PS++ ++++NS+ NA+G+RGSR GNA GVL+L Y+ + +D LEL+Q G + P AA ATGM+YKSTA R M++AG +GA G G+ +G
Sbjct: 37 SSVDLGVISPVFGIADNASSAADYLEYDVKGRGFHERATHTIGLSYFGGILGGGAYGALEGVRNSPSRKFKVRMNSLFNAAGQRGSRAGNALGVLALMYSGCQEVVDTLELEQ-YGVFDKALPIFAAGATGMIYKSTAGTRPMMMAGVIGAVLMGGVQFGESVLG 200
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Match: A0A397CNP0_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CNP0_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.810e-36 Identity = 77/173 (44.51%), Postives = 112/173 (64.74%), Query Frame = 2
Query: 83 GRIELPNFG--SGIDLGTVAPMYGQVADYEP---EYLDYDIKGKDLFAKCTINIGFSYLSGIGIGGAYGMLEGLRTAPSKRLRIKVNSVMNASGKRGSRLGNAGGVLSLFYTLAEHGLDRLELDQRLGGGEYINPTIAAAATGMLYKSTANPRTMLLAGAVGAASAGVYYIGK 586
G + LP+FG S IDLG +AP++G P +YL+YD +G+ + T IG SY GI GGA G++EG+R APS +L++++NS+ NA+G RGSR GNA G+L+L Y+ + D EL++ + + + P +AA ATGMLYK+TA R M++AGA+GA G + G
Sbjct: 57 GPLTLPDFGGNSQIDLGAIAPVFGIAGTTAPSAADYLEYDARGRGFHERATHIIGMSYFGGILGGGAIGVVEGIRNAPSSKLKVRLNSLFNAAGHRGSRAGNALGILALMYSSIQELADTAELERFVPVDKAV-PVLAAGATGMLYKATAGTRPMVMAGAIGAVVMGAFQFGS 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig152.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig152.5.1 >prot_P-wetherbeei_contig152.5.1 ID=prot_P-wetherbeei_contig152.5.1|Name=mRNA_P-wetherbeei_contig152.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp MSSGGSGASSGASGDDPYKDSGSRYGRIELPNFGSGIDLGTVAPMYGQVAback to top mRNA from alignment at P-wetherbeei_contig152:10623..12271+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig152.5.1 ID=mRNA_P-wetherbeei_contig152.5.1|Name=mRNA_P-wetherbeei_contig152.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1649bp|location=Sequence derived from alignment at P-wetherbeei_contig152:10623..12271+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig152:10623..12271+ >mRNA_P-wetherbeei_contig152.5.1 ID=mRNA_P-wetherbeei_contig152.5.1|Name=mRNA_P-wetherbeei_contig152.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig152:10623..12271+ (Phaeothamnion wetherbeei SAG_119_79)back to top |