mRNA_P-wetherbeei_contig15138.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15138.2.1
Unique NamemRNA_P-wetherbeei_contig15138.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Match: UPI0019993242 (Hydroxyacid dehydrogenase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019993242)

HSP 1 Score: 379 bits (972), Expect = 1.470e-128
Identity = 194/313 (61.98%), Postives = 235/313 (75.08%), Query Frame = 1
Query:    1 MDRVLVTDLIDPVGIALLAARVEVVQPPDTSLGTLRALSREVDAVITRSRLPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAEHCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGHIGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTCPLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGAMLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRMLAGEPPHSFVNPE 939
            MDRVL+ D IDP  ++LL  RVEV+   + S   +R   R+ DAVITRSRLPDD FE A ++RA MIHGTG+DLV I AA+  GV V  +PGGNAQSVAE+C+MA+++L RN   I   ++T PWD  R   A+A E++  T+GIVGVG IG+ +A+ICR G  MRVLG QRR+D L    EPAALD +L  SDF+V+ CPLTPET HL +  RL  MK +A+L+NVGRG VIDEAALV+AL +G IAGAMLDVYEHYRL PGHPL +LPN VLTPHLAG T+ESR R G  AA+ETLRML+GEPP +FVNPE
Sbjct:    1 MDRVLLVDPIDPSAVSLLRERVEVIVCSEASFDGIRRDGRDADAVITRSRLPDDFFEHARKVRAAMIHGTGMDLVPIEAATAHGVAVSRLPGGNAQSVAEYCVMAMLMLGRNALEITTKIKTLPWDETRLLGARAHEISAMTVGIVGVGEIGRRVARICRHGFGMRVLGQQRRMDQLGPDAEPAALDRILDASDFIVLACPLTPETQHLFNRDRLSRMKSSAWLINVGRGAVIDEAALVEALRDGRIAGAMLDVYEHYRLAPGHPLFSLPNAVLTPHLAGMTQESRKRMGAAAAEETLRMLSGEPPKNFVNPE 313          
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Match: A0A537CDT9_9PROT (Hydroxyacid dehydrogenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CDT9_9PROT)

HSP 1 Score: 361 bits (927), Expect = 8.410e-122
Identity = 187/309 (60.52%), Postives = 227/309 (73.46%), Query Frame = 1
Query:   13 LVTDLIDPVGIALLAARVEVVQPPDTSLGTLRALSREVDAVITRSRLPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAEHCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGHIGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTCPLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGAMLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRMLAGEPPHSFVNPE 939
            ++TD I P G  +LA R E+++ PD    TLR L+ + + +ITRS+LPDD+  AAPR+RAV++HGTG DLV I  A+ RGVMV N+PGGNAQSVAE+C++A+++LARN   I  +L   PWD AR   A A E++  TLGIVGVG IG  LA+ICR G  MRVLG QRRL+ LP   EPA LD LL  SDFVVVTCPLTPET HL + +RL +MK TA+L+NVGRG V+ E ALV+AL    IAGAMLDV+EHYRL PGHPL AL N VLTPHLAG T ESR R    AA+E LRML G  P++FVNP+
Sbjct:    1 MLTDSISPEGEEVLARRAEIIRSPDADPATLRRLACDAEGIITRSKLPDDIIAAAPRLRAVVVHGTGTDLVPIAEATARGVMVANVPGGNAQSVAEYCVLAMLMLARNVLAITNALHAGPWDAARLRGAAAHEISAMTLGIVGVGEIGGRLARICRRGFGMRVLGTQRRLNCLPPEAEPARLDELLPASDFVVVTCPLTPETQHLFNRERLGSMKRTAWLINVGRGAVVQEDALVEALRARRIAGAMLDVFEHYRLPPGHPLFALDNAVLTPHLAGMTMESRGRISVAAAEEMLRMLEGARPNNFVNPQ 309          
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Match: A0A0S8BB20_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BB20_9PROT)

HSP 1 Score: 360 bits (925), Expect = 2.460e-121
Identity = 185/312 (59.29%), Postives = 231/312 (74.04%), Query Frame = 1
Query:    4 DRVLVTDLIDPVGIALLAARVEVVQPPDTSLGTLRALSREVDAVITRSRLPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAEHCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGHIGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTCPLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGAMLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRMLAGEPPHSFVNPE 939
            +RVL+ D IDP G+ LLA  V++V+ PD  +  +R L+++ DA I RSRLPDD+FE APR+RAV IHGTG DLV + +A   GV+V N+PG NAQSVAE+C+MA+++LARN   I  ++R++ WD AR+ ++   E+ G T GIVGVG IG  LA I   GL MRVLG QRRL+ LP  VEP  LD LL+ESDFVV+T PLT +THHL +A+R+  +KP A+L+NVGRG VIDE AL +AL    I GAMLDV+EHYRL PGHPL AL N VLTPHLAG TRESR+R G  AAQ TL MLAGE P + +NP+
Sbjct:    3 ERVLLIDPIDPSGVELLARAVDIVETPDGDVEAVRRLAQDCDATIIRSRLPDDIFEVAPRLRAVTIHGTGTDLVPLASADAHGVIVANLPGENAQSVAEYCVMAMLMLARNAAAITMAIRSEAWDAARARSSDVHEIAGMTCGIVGVGAIGSRLAGILHRGLGMRVLGTQRRLNRLPPEVEPVTLDRLLSESDFVVITAPLTRDTHHLFNAERIARLKPDAWLINVGRGAVIDEQALTEALRARRIRGAMLDVFEHYRLAPGHPLFALDNAVLTPHLAGITRESRMRMGAAAAQLTLAMLAGERPANLINPQ 314          
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Match: UPI001F395A50 (hydroxyacid dehydrogenase n=2 Tax=Paraburkholderia kirstenboschensis TaxID=1245436 RepID=UPI001F395A50)

HSP 1 Score: 299 bits (765), Expect = 5.950e-97
Identity = 159/310 (51.29%), Postives = 205/310 (66.13%), Query Frame = 1
Query:   10 VLVTDLIDPVGIALLAARVEVVQPPDTSLGTLRALSREVDAVITRSRLPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAEHCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGHIGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTCPLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGAMLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRMLAGEPPHSFVNPE 939
            VL T  +DP G++LL     VV  PD S  TLR +  + D ++ R++LP DLFE   R+R V+ +GTGLD + + +AS  G+ V N+PG N+Q+V E+C+   ++L+R F  +D  LR D W  AR+ +A   E++GKT+GIVGVG IG +LA  C  G  MRV+G Q RLDALPA VEP  +DTL A SDF+ + CPLT  T HLV+A+RL  MKP A LVN  RG VID+AALVDAL+  VI GAMLDV+    L PGHP   L NVVLTPH A  T+ES  R    AA++ +++L GE P   VNPE
Sbjct:   11 VLCTLPLDPAGLSLLEGIAHVVVAPDPSADTLRRMIGDADVLVVRTQLPADLFEQPNRLRGVVRNGTGLDFIPVASASLHGIPVANVPGANSQAVVEYCIGGFLLLSRRFAEMDSGLRRDGWAAARALSASTSELSGKTVGIVGVGTIGASLAHACHYGFGMRVIGSQPRLDALPAFVEPVDIDTLFARSDFISLNCPLTDATRHLVNAQRLELMKPHAVLVNASRGAVIDDAALVDALSRRVIKGAMLDVFTEQPLPPGHPFRQLDNVVLTPHAAALTQESTARMSLGAARQVVQLLKGERPDHLVNPE 320          
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Match: UPI0007C8399C (hydroxyacid dehydrogenase n=2 Tax=Cupriavidus TaxID=106589 RepID=UPI0007C8399C)

HSP 1 Score: 289 bits (740), Expect = 2.510e-93
Identity = 156/300 (52.00%), Postives = 199/300 (66.33%), Query Frame = 1
Query:   40 GIALLAARVEVVQPPDTSLGTLRALSREVDAVITRSRLPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAEHCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGHIGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTCPLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGAMLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRMLAGEPPHSFVNPE 939
            G ALLA   E+V  PDT   TLR + R+ D ++ RS LP DLF+ APR++ V+ +GTGLD++ + AA+  G+ V N+PG NAQ+VAE+C+ A + LAR F  +D +LR   W  AR+ +A  VE+ GKT+GIVG+G+IG  LA+IC     M VL  Q     LP  V    LD LL  SDFV + CPLTP+THHL+DA RL AMKP AFLVN  RG V+DE ALV AL  G IAGA LDV+    L P HPLLAL NV+LTPH A  T+ES  +    AA++ L+++AGE P   VNP+
Sbjct:   16 GAALLAPVAELVVAPDTGADTLRRMVRDADYLLVRSHLPADLFDGAPRLKGVVRNGTGLDMIPVDAATALGIPVANVPGANAQAVAEYCIGAFLALARRFGMMDAALRGAGWAEARALSAPTVELAGKTVGIVGLGNIGGRLARICAGAFGMTVLASQPGEAGLPDFVTRVTLDELLRRSDFVSLNCPLTPQTHHLLDAARLRAMKPGAFLVNAARGEVVDEDALVRALGEGWIAGAALDVFARQPLAPAHPLLALDNVMLTPHAASLTQESSEKMSTGAARQLLQLIAGERPEFLVNPQ 315          
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Match: A0A1M6RYE2_9PROT (D-3-phosphoglycerate dehydrogenase n=2 Tax=Roseomonas TaxID=125216 RepID=A0A1M6RYE2_9PROT)

HSP 1 Score: 287 bits (735), Expect = 1.480e-92
Identity = 155/310 (50.00%), Postives = 205/310 (66.13%), Query Frame = 1
Query:   10 VLVTDLIDPVGIALLAARVEVVQPPDTSLGTLRALSREVDAVITRSRLPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAEHCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGHIGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTCPLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGAMLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRMLAGEPPHSFVNPE 939
            V +TD IDP G A+L A    V+ P  + G L AL    DAV+ R +LPDDL   APR+ A +  G G+D++ +   + +GV+V N+PG NA SVAE  +  ++ +AR+   +   L +  WD ARS +AQA E+ G+TLGI+GVG IG  LA+I   G  MRVLG++R   A+P G+  A LDT+ AESDF+ + CPLTPET  LV A R+  MKP+A+L+N+ RGPVIDE AL+ AL  G I GA LDVY+   L P HPL ALPNV+LTPH AG + E+  R    AA+E +R+LAG+ P SF+NPE
Sbjct:    3 VALTDPIDPAGEAILRAAGHDVELP--AAGGLDALLARADAVVVRRKLPDDLSTRAPRLLAAVRQGVGVDMIPVEDCTAQGVLVANVPGANADSVAEFVIAQMLAVARHAEAMHAELLSLGWDKARSRSAQAFELRGRTLGIIGVGAIGTRLAEIASAGFRMRVLGYRRNAHAMPPGIPHADLDTIFAESDFIALACPLTPETKGLVSAARIARMKPSAWLLNLARGPVIDEGALLAALREGRIGGAALDVYDVQPLAPDHPLRALPNVILTPHAAGLSTEAVERMSTGAAEEVVRILAGQRPRSFINPE 310          
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Match: A0A2D9F3T3_9PROT (Hydroxyacid dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F3T3_9PROT)

HSP 1 Score: 285 bits (729), Expect = 8.940e-92
Identity = 152/311 (48.87%), Postives = 202/311 (64.95%), Query Frame = 1
Query:    7 RVLVTDLIDPVGIALLAARVEVVQPPDTSLGTLRALSREVDAVITRSRLPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAEHCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGHIGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTCPLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGAMLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRMLAGEPPHSFVNPE 939
            ++L+T  + P   ALL    E V  PDTS  TL AL  +VD ++ R++LPDD+ + AP +R ++ HG GLD + + AA+ RG+ V N+PG NA++VAE+C+ A+  L R    +DR LR D W+ AR+ A   VE+ G T+GIVGVG IG+A+A I   G  M VLG  RR   +P GVE   LD L   +D V++ CPLT +T  LVDA+RL  M+PTA LVNV RG V+    L+ AL +GVIAGA  DVY+H+ L P HPLL  PN++LTPH+AG T  S    G  AA++ LR+L GE P + VNPE
Sbjct:    6 KILLTSPVHPDAQALLDRHAETVIAPDTSGATLNALVGDVDGILVRNKLPDDICDHAPALRGMVRHGVGLDFIPVAAATARGIPVANLPGINARTVAEYCIAAVQHLRRPIVHMDRDLRADGWEAARAPAPGFVEMGGATIGIVGVGSIGRAVATIAGQGFGMTVLGASRRPGRMPEGVEETPLDDLFRRADAVILCCPLTDDTLGLVDARRLALMQPTAVLVNVSRGAVVVTDDLIAALKDGVIAGAATDVYDHHPLAPDHPLLDCPNILLTPHVAGITATSTRAMGMRAAEDLLRILRGEAPDNLVNPE 316          
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Match: A0A6P2EC46_9BURK (D-3-phosphoglycerate dehydrogenase n=1 Tax=Variovorax sp. RA8 TaxID=662548 RepID=A0A6P2EC46_9BURK)

HSP 1 Score: 283 bits (724), Expect = 4.340e-91
Identity = 152/305 (49.84%), Postives = 194/305 (63.61%), Query Frame = 1
Query:   49 LLAARVEVVQPPDTSLGTLRALSREVDAVITRSRLPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAEHCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGHIGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTCPLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGAMLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRMLAGEPPHSFVNPE----RKPW 951
            +L+A  ++V  P+    T+R +  + D ++ R+ LP DLFE   R+  V+ HG GLD++ + AA+ + + V N+PG NAQSVAE+C+ + + LAR F  +DR LRT  W  AR H A A E+ GKT+GIVGVG IG ALA+IC  G  MRVLG+Q    ALP  VE A L+ LL  SDFV + CPLTPET HL DA RL  MKP+AFLVN  RG V DEAAL  AL  G + GA +DV+    L   HP LAL NV+LTPH A  TRES  R    A ++  +++AG PP   VNPE    R+ W
Sbjct:    1 MLSAAADIVVAPNPDAETMRGMVGDADVLVVRTHLPADLFERPHRLIGVVRHGAGLDMIPVAAATAQNIPVANVPGANAQSVAEYCVGSFIALARRFGAMDRDLRTQGWAAARGHCAGAGELAGKTVGIVGVGAIGTALARICHYGFGMRVLGYQPSTRALPEFVERAELNDLLDASDFVSLHCPLTPETTHLFDAARLARMKPSAFLVNAARGEVTDEAALARALAEGRVRGAAIDVFSRQPLARDHPFLALDNVILTPHAAALTRESVDRMSLEAVRQVFQLVAGTPPDHLVNPEVWPRRRRW 305          
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Match: A0A502GFD7_9PROT (Hydroxyacid dehydrogenase n=1 Tax=Roseomonas nepalensis TaxID=1854500 RepID=A0A502GFD7_9PROT)

HSP 1 Score: 283 bits (723), Expect = 9.620e-91
Identity = 152/310 (49.03%), Postives = 203/310 (65.48%), Query Frame = 1
Query:   10 VLVTDLIDPVGIALLAARVEVVQPPDTSLGTLRALSREVDAVITRSRLPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAEHCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGHIGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTCPLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGAMLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRMLAGEPPHSFVNPE 939
            V +TD +DP G A+L A    ++ P    G L AL    DAV+ R +LPDDL   APR+ A +  G GLD++ +   + + V+V N+PG NA SVAE  +  ++ +AR   T+  +L ++ W+ +R+  A A E+ G+TLGIVG+G +G  LA I   G  MRVLGH+R    +P GVE A LD L AESDFV + CPLTPET  LV A R+  MKP A+L+N+ RGPV+D AAL+DAL  G I GA LDV++   L+ GHPL ALPNV+LTPH AG + E+ +R    AA+E +R+LAGE P SF+NPE
Sbjct:    3 VALTDPMDPAGEAVLRAAGHAIELPGA--GGLDALLARADAVVVRRKLPDDLSARAPRLLAAVRQGVGLDMIPVEDCTAQAVLVANVPGANADSVAEFAIGQMLAIARRVETMHAALLSEGWERSRARTAGAFELRGRTLGIVGMGAVGTRLADIASAGFRMRVLGHRRGEAPMPQGVERAELDALFAESDFVALACPLTPETRGLVSAARIARMKPGAWLLNLARGPVVDGAALLDALGAGRIGGAALDVFDVQPLDAGHPLRALPNVILTPHAAGLSGEAMVRMSVGAAEEVVRILAGERPRSFINPE 310          
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Match: A0A6N6MMF8_9HYPH (Hydroxyacid dehydrogenase n=2 Tax=Methylobacterium sp. YIM 132548 TaxID=2615211 RepID=A0A6N6MMF8_9HYPH)

HSP 1 Score: 282 bits (721), Expect = 1.050e-90
Identity = 149/307 (48.53%), Postives = 196/307 (63.84%), Query Frame = 1
Query:   19 TDLIDPVGIALLAARVEVVQPPDTSLGTLRALSREVDAVITRSRLPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAEHCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGHIGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTCPLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGAMLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRMLAGEPPHSFVNPE 939
            T+ I P   ALL  R  ++  PDT  GTLRAL+ E   +I R++LPDD+ + APR+R ++ HG GLD V I AA+ RG+ V N+PG N Q+VAEH   AL  L R    +D +LR   W  A+S A+   E+ G TLGI+G G IG+ +A I R G  +RVLGH RR  +    +EP   +TL +ESD VV+ CPL  ET  LVDA+ +  M+  A L+NV RGP+++ AAL +AL  G IAGA LDV+    L P HPL A PN++LTPH+AG++  S    G  AA+E LR+L GEPP + VNPE
Sbjct:    2 TNPIHPDAEALLRPRARLITAPDTGAGTLRALAAEATGLIVRAQLPDDILDHAPRLRGIVRHGVGLDFVPISAATARGIPVANLPGSNTQAVAEHVFAALFHLRRQLARLDATLREAGWIAAKSRASDLDEIGGTTLGILGTGEIGRRVAGIARHGFGLRVLGHARRNHSFDGQIEPVDRETLFSESDAVVIACPLNDETRGLVDARLIGRMRRRAVLINVARGPIVEAAALAEALKAGRIAGAALDVFAVQPLPPDHPLFACPNLLLTPHVAGTSATSLRVMGLGAAEEMLRILRGEPPRNLVNPE 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15138.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00199932421.470e-12861.98Hydroxyacid dehydrogenase n=1 Tax=Candidatus Parcu... [more]
A0A537CDT9_9PROT8.410e-12260.52Hydroxyacid dehydrogenase n=1 Tax=Betaproteobacter... [more]
A0A0S8BB20_9PROT2.460e-12159.29Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
UPI001F395A505.950e-9751.29hydroxyacid dehydrogenase n=2 Tax=Paraburkholderia... [more]
UPI0007C8399C2.510e-9352.00hydroxyacid dehydrogenase n=2 Tax=Cupriavidus TaxI... [more]
A0A1M6RYE2_9PROT1.480e-9250.00D-3-phosphoglycerate dehydrogenase n=2 Tax=Roseomo... [more]
A0A2D9F3T3_9PROT8.940e-9248.87Hydroxyacid dehydrogenase n=1 Tax=Rhodospirillacea... [more]
A0A6P2EC46_9BURK4.340e-9149.84D-3-phosphoglycerate dehydrogenase n=1 Tax=Variovo... [more]
A0A502GFD7_9PROT9.620e-9149.03Hydroxyacid dehydrogenase n=1 Tax=Roseomonas nepal... [more]
A0A6N6MMF8_9HYPH1.050e-9048.53Hydroxyacid dehydrogenase n=2 Tax=Methylobacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15138contigP-wetherbeei_contig15138:402..1367 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121033.AUCF01000009_gene1000
PFAMs2-Hacid_dh,2-Hacid_dh_C
Model size966
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.58e-87
EggNOG OGsCOG0111@1|root,COG0111@2|Bacteria,1RAVY@1224|Proteobacteria,2U5YH@28211|Alphaproteobacteria,2JZG0@204441|Rhodospirillales
DescriptionD-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Cds size966
COG categoryEH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186046.1464102-CDS-P-wetherbeei_contig15138:401..13671683186046.1464102-CDS-P-wetherbeei_contig15138:401..1367Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15138 402..1367 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15138.2.1prot_P-wetherbeei_contig15138.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15138 402..1367 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15138.2.1

>prot_P-wetherbeei_contig15138.2.1 ID=prot_P-wetherbeei_contig15138.2.1|Name=mRNA_P-wetherbeei_contig15138.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=322bp
MDRVLVTDLIDPVGIALLAARVEVVQPPDTSLGTLRALSREVDAVITRSR
LPDDLFEAAPRIRAVMIHGTGLDLVNIPAASERGVMVGNIPGGNAQSVAE
HCLMALMVLARNFRTIDRSLRTDPWDTARSHAAQAVEVNGKTLGIVGVGH
IGKALAKICRDGLSMRVLGHQRRLDALPAGVEPAALDTLLAESDFVVVTC
PLTPETHHLVDAKRLVAMKPTAFLVNVGRGPVIDEAALVDALTNGVIAGA
MLDVYEHYRLEPGHPLLALPNVVLTPHLAGSTRESRLRAGRIAAQETLRM
LAGEPPHSFVNPERKPWLPKT*
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mRNA from alignment at P-wetherbeei_contig15138:402..1367-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15138.2.1 ID=mRNA_P-wetherbeei_contig15138.2.1|Name=mRNA_P-wetherbeei_contig15138.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=966bp|location=Sequence derived from alignment at P-wetherbeei_contig15138:402..1367- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCGCGTCCTCGTCACCGACCTGATCGACCCCGTGGGCATCGCGCT GCTGGCCGCGCGGGTGGAAGTCGTGCAGCCGCCCGACACCAGCCTCGGGA CGTTGCGCGCCCTCAGCCGCGAGGTCGACGCGGTGATCACCCGCAGCCGG CTGCCGGACGACCTCTTCGAGGCGGCGCCGCGCATCCGCGCCGTGATGAT CCACGGCACGGGGCTCGACCTCGTCAACATCCCCGCCGCGAGCGAGCGCG GCGTCATGGTGGGCAACATCCCCGGCGGCAACGCGCAGTCGGTGGCGGAG CACTGCCTGATGGCGCTTATGGTGCTGGCGCGCAACTTCCGCACGATCGA CCGGTCGCTGCGCACCGACCCATGGGACACGGCCCGCTCACACGCCGCGC AGGCGGTGGAAGTCAACGGCAAGACGCTGGGCATCGTCGGTGTCGGGCAC ATCGGGAAAGCCCTGGCGAAGATCTGCCGCGACGGCCTCTCCATGCGCGT GCTCGGCCACCAGCGGCGGCTCGACGCGCTGCCCGCGGGCGTGGAGCCTG CGGCACTCGACACGCTGCTCGCCGAGTCCGACTTCGTCGTCGTCACCTGC CCGCTGACGCCCGAAACGCACCATCTAGTCGATGCGAAGCGCCTGGTCGC GATGAAGCCCACCGCCTTCCTCGTCAACGTCGGGCGCGGCCCCGTGATCG ACGAGGCGGCGCTGGTCGACGCGCTGACGAACGGCGTGATCGCCGGCGCC ATGCTCGACGTCTACGAGCACTACCGGCTCGAGCCCGGCCACCCGTTGCT CGCGCTGCCGAACGTCGTCCTCACCCCCCACCTCGCGGGCTCGACGCGCG AGTCGCGCCTGCGCGCCGGCCGCATCGCCGCGCAGGAAACGCTGCGCATG CTTGCGGGCGAGCCCCCCCACAGTTTCGTCAATCCGGAGAGAAAGCCATG GCTTCCAAAGACCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15138:402..1367-

>mRNA_P-wetherbeei_contig15138.2.1 ID=mRNA_P-wetherbeei_contig15138.2.1|Name=mRNA_P-wetherbeei_contig15138.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=966bp|location=Sequence derived from alignment at P-wetherbeei_contig15138:402..1367- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCGCGTCCTCGTCACCGACCTGATCGACCCCGTGGGCATCGCGCT
GCTGGCCGCGCGGGTGGAAGTCGTGCAGCCGCCCGACACCAGCCTCGGGA
CGTTGCGCGCCCTCAGCCGCGAGGTCGACGCGGTGATCACCCGCAGCCGG
CTGCCGGACGACCTCTTCGAGGCGGCGCCGCGCATCCGCGCCGTGATGAT
CCACGGCACGGGGCTCGACCTCGTCAACATCCCCGCCGCGAGCGAGCGCG
GCGTCATGGTGGGCAACATCCCCGGCGGCAACGCGCAGTCGGTGGCGGAG
CACTGCCTGATGGCGCTTATGGTGCTGGCGCGCAACTTCCGCACGATCGA
CCGGTCGCTGCGCACCGACCCATGGGACACGGCCCGCTCACACGCCGCGC
AGGCGGTGGAAGTCAACGGCAAGACGCTGGGCATCGTCGGTGTCGGGCAC
ATCGGGAAAGCCCTGGCGAAGATCTGCCGCGACGGCCTCTCCATGCGCGT
GCTCGGCCACCAGCGGCGGCTCGACGCGCTGCCCGCGGGCGTGGAGCCTG
CGGCACTCGACACGCTGCTCGCCGAGTCCGACTTCGTCGTCGTCACCTGC
CCGCTGACGCCCGAAACGCACCATCTAGTCGATGCGAAGCGCCTGGTCGC
GATGAAGCCCACCGCCTTCCTCGTCAACGTCGGGCGCGGCCCCGTGATCG
ACGAGGCGGCGCTGGTCGACGCGCTGACGAACGGCGTGATCGCCGGCGCC
ATGCTCGACGTCTACGAGCACTACCGGCTCGAGCCCGGCCACCCGTTGCT
CGCGCTGCCGAACGTCGTCCTCACCCCCCACCTCGCGGGCTCGACGCGCG
AGTCGCGCCTGCGCGCCGGCCGCATCGCCGCGCAGGAAACGCTGCGCATG
CTTGCGGGCGAGCCCCCCCACAGTTTCGTCAATCCGGAGAGAAAGCCATG
GCTTCCAAAGACCTGA
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