mRNA_P-wetherbeei_contig1502.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Match: A0A6H5KW76_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW76_9PHAE) HSP 1 Score: 139 bits (349), Expect = 7.270e-38 Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = 3
Query: 24 TLEDLKAALNEMLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYLAYNRYDHAASVLMAESGQPSPDDALNRDFVRDELGLAEFPACT--GIAR-LPLLYGIVSALKQRRHQPPSVSGAVEAASE 440
T++DLK AL E LE RGVLG+++A++RAEVF LEGP + V P P LSNENLLINELVR+YL+YN Y +A V MAESGQP + +L+R F+RDELGL+E T G AR LPLLYGI ALK+RR + +G E
Sbjct: 21 TIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTP-LSNENLLINELVRDYLSYNGYSNALGVFMAESGQPI-ERSLDRGFIRDELGLSERRDSTDHGSARPLPLLYGITHALKRRRKEASGNNGGYAECEE 160
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Match: D7FVJ9_ECTSI (Similar to chemokine (C-C motif) receptor 6a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ9_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.700e-35 Identity = 76/129 (58.91%), Postives = 95/129 (73.64%), Query Frame = 3
Query: 24 TLEDLKAALNEMLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYLAYNRYDHAASVLMAESGQPSPDDALNRDFVRDELGLAEFPACT---GIARLPLLYGIVSALKQRRHQ 401
T++DLK AL E LE RGVLG+++A++RAEVF LEGP + V P P LSN+NLLINELVR+YL+YN Y +A V MAESGQP + +L+R F+RDELGL+E G LPLLYGI ALK+RR +
Sbjct: 21 TIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQERVLPTP-LSNDNLLINELVRDYLSYNGYANALGVFMAESGQPI-ERSLDRGFIRDELGLSERLDSIDRGGARPLPLLYGITHALKRRRKE 147
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Match: A0A8B7Y9V1_ACAPL (lisH domain-containing protein FOPNL-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y9V1_ACAPL) HSP 1 Score: 128 bits (322), Expect = 3.010e-34 Identity = 71/128 (55.47%), Postives = 93/128 (72.66%), Query Frame = 3
Query: 21 STLEDLKAALNEMLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYLAYNRYDHAASVLMAESGQPSPDDALNRDFVRDELGLAEFPACTGIARLPLLYGIVSALKQRRHQP 404
S++++LK+ L E LE RGVLGQ+KAR+RAEVF AL+ +D P PPLSNEN+LINEL+REYL +N+Y +AASVLMAESGQP L+R+F+ +EL + E A +PLLYGI+S Q + P
Sbjct: 2 SSVQELKSVLRETLETRGVLGQIKARVRAEVFHALDDQSD---PRPPLSNENMLINELIREYLEFNKYKYAASVLMAESGQPQTP--LDREFLVNELNITED---RDTATVPLLYGILSHFLQSKRTP 121
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Match: A0A1S3I2D6_LINUN (lisH domain-containing protein FOPNL n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I2D6_LINUN) HSP 1 Score: 124 bits (312), Expect = 8.840e-33 Identity = 66/128 (51.56%), Postives = 92/128 (71.88%), Query Frame = 3
Query: 21 STLEDLKAALNEMLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYLAYNRYDHAASVLMAESGQPSPDDALNRDFVRDELGLAEFPACTGIARLPLLYGIVSALKQ-RRHQ 401
+ L++LK + E LE+RGVLGQ+KAR+RAEVF AL+ AD P PPLSNEN++INEL+REYL YN+Y + ASV++AE+GQP LNR+F+ ++L + E + + +LPLLY I++ RHQ
Sbjct: 2 ANLQELKTVVKETLEKRGVLGQIKARVRAEVFNALDDQAD---PRPPLSNENMIINELIREYLEYNKYKYTASVMLAETGQPKTP--LNREFLAEQLNVVEDKTASSL-KLPLLYSIIAQFTPGSRHQ 123
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Match: UPI002026670D (centrosomal protein 20 isoform X1 n=2 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002026670D) HSP 1 Score: 123 bits (308), Expect = 3.950e-32 Identity = 69/121 (57.02%), Postives = 87/121 (71.90%), Query Frame = 3
Query: 21 STLEDLKAALNEMLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYLAYNRYDHAASVLMAESGQPSPDDALNRDFVRDELGLAEFPACTGIARLPLLYGIVSAL 383
+T+ +LKA L + LE+RG LGQ+KARIRAEVF AL+ D P PPLS+ENLLINEL+REYL +N+Y +AASVL AESGQP L+RDF+ EL + E P + PLLYGI++ L
Sbjct: 2 ATITELKAVLKDTLEKRGALGQIKARIRAEVFNALD---DQTEPRPPLSHENLLINELIREYLEFNKYKYAASVLTAESGQPEVP--LDRDFLVKELNVVEDPKSRSV---PLLYGILAQL 114
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Match: UPI001EE4F0DF (centrosomal protein 20-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE4F0DF) HSP 1 Score: 122 bits (307), Expect = 4.330e-32 Identity = 79/144 (54.86%), Postives = 94/144 (65.28%), Query Frame = 3
Query: 30 EDLKAALNEMLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYLAYNRYDHAASVLMAESGQPSPDDALNRDFVRDELGLAE-FPACTGIARLPLLYGIVSALKQRRHQPPSVSGAVEAASEYGETRG 458
EDLK L + LE RGVLGQ+KARIRAEVF AL+ D PPLSNEN+LINEL+REYL YN+Y +A+SVL+AESG P AL R+F+R+EL + E PA T +PLLY IVS R P S + A AS RG
Sbjct: 5 EDLKEVLKDSLENRGVLGQIKARIRAEVFNALD---DQTEHKPPLSNENVLINELIREYLEYNKYRYASSVLVAESGMPKV--ALEREFLRNELNVVEDAPAKT----VPLLYSIVSHYVNRH--PRSTTAAQGRASHREGNRG 137
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Match: UPI0018D85249 (centrosomal protein 20-like isoform X2 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D85249) HSP 1 Score: 122 bits (307), Expect = 5.130e-32 Identity = 71/145 (48.97%), Postives = 98/145 (67.59%), Query Frame = 3
Query: 21 STLEDLKAALNEMLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYLAYNRYDHAASVLMAESGQPSPDDALNRDFVRDELGLAEFPACTGIARLPLLYGIVSALKQRRHQPPSVSGAVEAASEYGETR 455
+++++LKA L E LE RGV+GQ+KAR+RAEVF AL+ D P PPLSNEN+LINEL+REYL +N+Y +++SVLMAESGQP L+R+F+ +EL + E A +PLLYGI+S Q + S + A + +TR
Sbjct: 2 TSVQELKAVLKETLETRGVMGQIKARVRAEVFHALDDQND---PRPPLSNENMLINELIREYLEFNKYKYSSSVLMAESGQPQTP--LDREFLVNELNITEDRES---ATVPLLYGILSHFLQTKRTAASKEHSRTAKATSKDTR 138
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Match: A0A665U0W6_ECHNA (FGFR1OP N-terminal like n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665U0W6_ECHNA) HSP 1 Score: 121 bits (304), Expect = 7.070e-32 Identity = 68/119 (57.14%), Postives = 88/119 (73.95%), Query Frame = 3
Query: 21 STLEDLKAALNEMLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYLAYNRYDHAASVLMAESGQPSPDDALNRDFVRDELGLAEFPACTGIARLPLLYGIVS 377
+T+ +LK A+ + LE RGVLGQ+KARIRAEVF AL+ +A PP LS+ENLLINEL+REYL +NRY + ASVL AESGQP +D L+R F+ +EL + E P+ + PLLYG+VS
Sbjct: 2 ATITELKCAVRDTLESRGVLGQLKARIRAEVFSALDDRREARPP---LSHENLLINELIREYLEFNRYRYTASVLTAESGQP--EDPLDRQFLANELKVTEDPSSKSV---PLLYGLVS 112
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Match: A0A553QSB8_9TELE (LisH domain-containing protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QSB8_9TELE) HSP 1 Score: 122 bits (305), Expect = 7.080e-32 Identity = 69/119 (57.98%), Postives = 86/119 (72.27%), Query Frame = 3
Query: 21 STLEDLKAALNEMLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYLAYNRYDHAASVLMAESGQPSPDDALNRDFVRDELGLAEFPACTGIARLPLLYGIVS 377
+T+ +LK+AL E LE RGVLGQ+KAR+RAEVF AL+ P P PPLS+ENLLINEL+REYL +N+Y + ASVL AESGQP L RDF+ EL +AE P+ + PLLYG+ S
Sbjct: 16 ATVTELKSALRETLETRGVLGQLKARVRAEVFSALDDPNT---PRPPLSHENLLINELIREYLEFNKYRYTASVLTAESGQPEVP--LERDFLAKELNVAEDPSSKTV---PLLYGLFS 126
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Match: A0A6P3W149_CLUHA (lisH domain-containing protein FOPNL n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3W149_CLUHA) HSP 1 Score: 121 bits (303), Expect = 9.440e-32 Identity = 69/125 (55.20%), Postives = 88/125 (70.40%), Query Frame = 3
Query: 21 STLEDLKAALNEMLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYLAYNRYDHAASVLMAESGQPSPDDALNRDFVRDELGLAEFPACTGIARLPLLYGIVSALKQRR 395
+++ +LK AL E LE RGV+G++KARIRAEVF AL+ D P PPLS+ENLLINEL+REYL +N+Y + ASVL AESGQP L+R FV +EL + E P G +PLLYG++S Q R
Sbjct: 2 ASITELKCALRETLEARGVMGKLKARIRAEVFNALD---DQSEPRPPLSHENLLINELIREYLEFNKYRYTASVLTAESGQPEVP--LDRQFVANELNVVEDP---GARTMPLLYGLLSHFLQSR 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1502.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1502.3.1 >prot_P-wetherbeei_contig1502.3.1 ID=prot_P-wetherbeei_contig1502.3.1|Name=mRNA_P-wetherbeei_contig1502.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp MLEQRGVLGQVKARIRAEVFRALEGPADAVPPPPPLSNENLLINELVREYback to top mRNA from alignment at P-wetherbeei_contig1502:4914..5841- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1502.3.1 ID=mRNA_P-wetherbeei_contig1502.3.1|Name=mRNA_P-wetherbeei_contig1502.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=928bp|location=Sequence derived from alignment at P-wetherbeei_contig1502:4914..5841- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1502:4914..5841- >mRNA_P-wetherbeei_contig1502.3.1 ID=mRNA_P-wetherbeei_contig1502.3.1|Name=mRNA_P-wetherbeei_contig1502.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig1502:4914..5841- (Phaeothamnion wetherbeei SAG_119_79)back to top |