mRNA_P-wetherbeei_contig15012.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15012.3.1
Unique NamemRNA_P-wetherbeei_contig15012.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Match: A0A536TEL3_9PROT (Putative iron-sulfur cluster insertion protein ErpA n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TEL3_9PROT)

HSP 1 Score: 200 bits (508), Expect = 1.350e-64
Identity = 98/111 (88.29%), Postives = 104/111 (93.69%), Query Frame = 1
Query:    1 MNAITEMPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYGFTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIKNPNATSTCGRG 333
            MNA+T+MPAPLVFTD AAAKVK LIDEEGN ELKLRVFVTGGGCSGFQYGFTFDE V++DDTSMQKNGVTLLIDPMS QYL GAEIDYQEG+EGAQFVIKNPNAT+TCG G
Sbjct:    1 MNAMTDMPAPLVFTDAAAAKVKTLIDEEGNTELKLRVFVTGGGCSGFQYGFTFDETVNEDDTSMQKNGVTLLIDPMSYQYLVGAEIDYQEGLEGAQFVIKNPNATTTCGCG 111          
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Match: A0A1F4DGM1_9PROT (Putative iron-sulfur cluster insertion protein ErpA n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4DGM1_9PROT)

HSP 1 Score: 196 bits (498), Expect = 4.680e-63
Identity = 97/112 (86.61%), Postives = 104/112 (92.86%), Query Frame = 1
Query:    1 MNAITE-MPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYGFTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIKNPNATSTCGRG 333
            MNA+TE MP PLVFTDNAA KV+QLI+EEGN +LKLRVFVTGGGCSGFQYGFTFDE+ S+DDTSMQK GVTLLIDPMSLQYL GAEIDYQEG+EGAQFVIKNPNATSTCG G
Sbjct:    1 MNAVTEQMPDPLVFTDNAANKVRQLIEEEGNPDLKLRVFVTGGGCSGFQYGFTFDESTSEDDTSMQKGGVTLLIDPMSLQYLAGAEIDYQEGIEGAQFVIKNPNATSTCGCG 112          
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Match: A0A1F4F6G3_9PROT (Putative iron-sulfur cluster insertion protein ErpA n=8 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F6G3_9PROT)

HSP 1 Score: 195 bits (496), Expect = 9.140e-63
Identity = 95/111 (85.59%), Postives = 101/111 (90.99%), Query Frame = 1
Query:    1 MNAITEMPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYGFTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIKNPNATSTCGRG 333
            MNA+TEMPAPL+F+DNAA KVKQLIDEEGN ELKLRVFVTGGGCSGFQYGFTFDEA +DDD  M+KNGV LLIDPMS QYL GAEIDYQEG+EGAQFVIKNPNA STCG G
Sbjct:    1 MNAVTEMPAPLIFSDNAANKVKQLIDEEGNPELKLRVFVTGGGCSGFQYGFTFDEAKNDDDAVMEKNGVMLLIDPMSCQYLAGAEIDYQEGLEGAQFVIKNPNAQSTCGCG 111          
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Match: A0A0S8C3L1_9PROT (Putative iron-sulfur cluster insertion protein ErpA n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A0S8C3L1_9PROT)

HSP 1 Score: 195 bits (495), Expect = 1.340e-62
Identity = 98/112 (87.50%), Postives = 103/112 (91.96%), Query Frame = 1
Query:    1 MNAITE-MPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYGFTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIKNPNATSTCGRG 333
            MNA+TE MP PLVFT+ AAAKVKQLIDEEGN ELKLRVFVTGGGCSGFQYGFTFDE V+DDDTSMQ+ GVTLLIDPMSLQYL GAEIDYQE VEGAQFVIKNPNA+STCG G
Sbjct:    1 MNAVTEQMPEPLVFTEAAAAKVKQLIDEEGNAELKLRVFVTGGGCSGFQYGFTFDETVNDDDTSMQRGGVTLLIDPMSLQYLTGAEIDYQENVEGAQFVIKNPNASSTCGCG 112          
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Match: A0A536TXC1_9PROT (Putative iron-sulfur cluster insertion protein ErpA n=7 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A536TXC1_9PROT)

HSP 1 Score: 194 bits (494), Expect = 1.850e-62
Identity = 96/111 (86.49%), Postives = 100/111 (90.09%), Query Frame = 1
Query:    1 MNAITEMPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYGFTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIKNPNATSTCGRG 333
            MNA+ EMPAPLVFTD+AA KVKQLIDEEGN ELKLRVFVTGGGCSGFQYGFTFDE  SDDDT M+KNGV LLIDPMS QYL GAEIDY EG+EGAQFVIKNPNATSTCG G
Sbjct:    1 MNAVAEMPAPLVFTDSAANKVKQLIDEEGNTELKLRVFVTGGGCSGFQYGFTFDEVKSDDDTVMEKNGVMLLIDPMSYQYLVGAEIDYTEGLEGAQFVIKNPNATSTCGCG 111          
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Match: A0A536T9L8_9PROT (Putative iron-sulfur cluster insertion protein ErpA n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536T9L8_9PROT)

HSP 1 Score: 194 bits (493), Expect = 2.620e-62
Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 1
Query:    1 MNAITEMPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYGFTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIKNPNATSTCGRG 333
            MNA+TEMPAPLVFTD AA KVK LI+EEGN ELKLRVFVTGGGCSGFQYGFTFDE V++DDT M KNGVTLLIDPMS QYL GAEIDYQEG+EGAQFVIKNPNATSTCG G
Sbjct:    1 MNAMTEMPAPLVFTDAAATKVKSLIEEEGNPELKLRVFVTGGGCSGFQYGFTFDEDVAEDDTRMDKNGVTLLIDPMSYQYLVGAEIDYQEGLEGAQFVIKNPNATSTCGCG 111          
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Match: A0A536VV93_9PROT (Putative iron-sulfur cluster insertion protein ErpA n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536VV93_9PROT)

HSP 1 Score: 193 bits (491), Expect = 5.290e-62
Identity = 93/111 (83.78%), Postives = 102/111 (91.89%), Query Frame = 1
Query:    1 MNAITEMPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYGFTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIKNPNATSTCGRG 333
            MNA+T+MPAPL+FTD AA KVK LI+EEGN +LKLRVFVTGGGCSGFQYGFTFDE V++DDTSM+KNGVTLLIDPMS QYL GAEIDYQEG+EGAQFVIKNP ATSTCG G
Sbjct:    1 MNAMTDMPAPLIFTDAAATKVKSLIEEEGNADLKLRVFVTGGGCSGFQYGFTFDETVNEDDTSMEKNGVTLLIDPMSYQYLVGAEIDYQEGLEGAQFVIKNPGATSTCGCG 111          
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Match: A0A4R3Y0A9_9PROT (Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Sulfurirhabdus autotrophica TaxID=1706046 RepID=A0A4R3Y0A9_9PROT)

HSP 1 Score: 193 bits (491), Expect = 5.290e-62
Identity = 92/111 (82.88%), Postives = 104/111 (93.69%), Query Frame = 1
Query:    1 MNAITEMPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYGFTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIKNPNATSTCGRG 333
            MNA+TEM +PL FTD+AA+KVK+LI+EEGN ELKLRVFV+GGGCSGFQYGFTFDE V++DDT++QKNGVTLLIDPMS QYL GAEIDYQEG+EGAQFVIKNPNATSTCG G
Sbjct:    1 MNAVTEMESPLNFTDSAASKVKELIEEEGNAELKLRVFVSGGGCSGFQYGFTFDEVVNEDDTALQKNGVTLLIDPMSFQYLAGAEIDYQEGLEGAQFVIKNPNATSTCGCG 111          
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Match: A0A536SLT4_9PROT (Putative iron-sulfur cluster insertion protein ErpA n=2 Tax=root TaxID=1 RepID=A0A536SLT4_9PROT)

HSP 1 Score: 192 bits (489), Expect = 1.070e-61
Identity = 92/111 (82.88%), Postives = 100/111 (90.09%), Query Frame = 1
Query:    1 MNAITEMPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYGFTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIKNPNATSTCGRG 333
            MNA+ EMPAP VFTD+AA KVKQLIDEEGN ELKLRVFVTGGGCSGFQYGFTFDE  +DDDT ++KNGVTLL+DPMS QYL G+EIDY EG+EGAQFVIKNPNATSTCG G
Sbjct:    1 MNAVAEMPAPFVFTDSAANKVKQLIDEEGNTELKLRVFVTGGGCSGFQYGFTFDEVKNDDDTVLEKNGVTLLVDPMSYQYLAGSEIDYTEGLEGAQFVIKNPNATSTCGCG 111          
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Match: A0A1F4A0E7_9PROT (Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4A0E7_9PROT)

HSP 1 Score: 192 bits (488), Expect = 1.570e-61
Identity = 96/112 (85.71%), Postives = 102/112 (91.07%), Query Frame = 1
Query:    1 MNAITE-MPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYGFTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIKNPNATSTCGRG 333
            MNA+TE +P PLVFTDNAA KVKQLIDEEGN ELKLRVFVTGGGCSGFQYGFTFDE  ++DDT+MQ+ GVTLLIDPMSLQYL GAEIDYQE VEGAQFVIKNPNATSTCG G
Sbjct:    1 MNAVTEKIPDPLVFTDNAANKVKQLIDEEGNAELKLRVFVTGGGCSGFQYGFTFDETTNEDDTAMQRGGVTLLIDPMSLQYLMGAEIDYQENVEGAQFVIKNPNATSTCGCG 112          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15012.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A536TEL3_9PROT1.350e-6488.29Putative iron-sulfur cluster insertion protein Erp... [more]
A0A1F4DGM1_9PROT4.680e-6386.61Putative iron-sulfur cluster insertion protein Erp... [more]
A0A1F4F6G3_9PROT9.140e-6385.59Putative iron-sulfur cluster insertion protein Erp... [more]
A0A0S8C3L1_9PROT1.340e-6287.50Putative iron-sulfur cluster insertion protein Erp... [more]
A0A536TXC1_9PROT1.850e-6286.49Putative iron-sulfur cluster insertion protein Erp... [more]
A0A536T9L8_9PROT2.620e-6286.49Putative iron-sulfur cluster insertion protein Erp... [more]
A0A536VV93_9PROT5.290e-6283.78Putative iron-sulfur cluster insertion protein Erp... [more]
A0A4R3Y0A9_9PROT5.290e-6282.88Putative iron-sulfur cluster insertion protein Erp... [more]
A0A536SLT4_9PROT1.070e-6182.88Putative iron-sulfur cluster insertion protein Erp... [more]
A0A1F4A0E7_9PROT1.570e-6185.71Putative iron-sulfur cluster insertion protein Erp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15012contigP-wetherbeei_contig15012:1317..1655 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog522306.CAP2UW1_3027
Preferred nameerpA
PFAMsFe-S_biosyn
Model size339
Max annot lvl28216|Betaproteobacteria
KEGG koko:K15724
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.68e-60
EggNOG OGsCOG0316@1|root,COG0316@2|Bacteria,1RHCW@1224|Proteobacteria,2VR2M@28216|Betaproteobacteria,1KQ1R@119066|unclassified Betaproteobacteria
DescriptionRequired for insertion of 4Fe-4S clusters
Cds size339
COG categoryC
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186041.3076992-CDS-P-wetherbeei_contig15012:1316..16551683186041.3076992-CDS-P-wetherbeei_contig15012:1316..1655Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15012 1317..1655 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15012.3.1prot_P-wetherbeei_contig15012.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15012 1317..1655 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15012.3.1

>prot_P-wetherbeei_contig15012.3.1 ID=prot_P-wetherbeei_contig15012.3.1|Name=mRNA_P-wetherbeei_contig15012.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp
MNAITEMPAPLVFTDNAAAKVKQLIDEEGNLELKLRVFVTGGGCSGFQYG
FTFDEAVSDDDTSMQKNGVTLLIDPMSLQYLGGAEIDYQEGVEGAQFVIK
NPNATSTCGRGF*
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mRNA from alignment at P-wetherbeei_contig15012:1317..1655+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15012.3.1 ID=mRNA_P-wetherbeei_contig15012.3.1|Name=mRNA_P-wetherbeei_contig15012.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig15012:1317..1655+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATGCGATCACCGAAATGCCCGCCCCGCTGGTTTTTACCGACAACGC GGCGGCCAAGGTCAAACAGCTGATCGACGAGGAAGGCAATCTCGAGCTTA AACTGCGGGTGTTCGTCACCGGCGGCGGCTGCTCGGGCTTCCAGTACGGA TTCACGTTCGATGAAGCCGTCAGCGACGACGACACCTCGATGCAGAAAAA CGGCGTTACCCTGCTGATCGATCCGATGAGCCTGCAGTATCTGGGCGGCG CCGAGATCGACTACCAAGAGGGTGTTGAAGGCGCGCAGTTCGTCATCAAG AATCCCAACGCAACCAGCACCTGCGGACGCGGCTTCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15012:1317..1655+

>mRNA_P-wetherbeei_contig15012.3.1 ID=mRNA_P-wetherbeei_contig15012.3.1|Name=mRNA_P-wetherbeei_contig15012.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig15012:1317..1655+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATGCGATCACCGAAATGCCCGCCCCGCTGGTTTTTACCGACAACGC
GGCGGCCAAGGTCAAACAGCTGATCGACGAGGAAGGCAATCTCGAGCTTA
AACTGCGGGTGTTCGTCACCGGCGGCGGCTGCTCGGGCTTCCAGTACGGA
TTCACGTTCGATGAAGCCGTCAGCGACGACGACACCTCGATGCAGAAAAA
CGGCGTTACCCTGCTGATCGATCCGATGAGCCTGCAGTATCTGGGCGGCG
CCGAGATCGACTACCAAGAGGGTGTTGAAGGCGCGCAGTTCGTCATCAAG
AATCCCAACGCAACCAGCACCTGCGGACGCGGCTTCTAG
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