mRNA_P-wetherbeei_contig14985.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14985.1.1
Unique NamemRNA_P-wetherbeei_contig14985.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Match: A0A7Z9UB57_9BACT (OmpA-like domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UB57_9BACT)

HSP 1 Score: 256 bits (653), Expect = 1.650e-81
Identity = 141/258 (54.65%), Postives = 182/258 (70.54%), Query Frame = 1
Query:   28 IIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLWVLAQADKTKKAVSLYFTEPNLSPEEIKLRLEHPALPSSKEKPSETNT-SKPSSKLQYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLENDKSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNGTYGNWELSTERANAARRVLEGGGVH--RIAEVRGLADTRLRTPDDPLNHANRRVSLIIRYVNGKPP 792
            IIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLW++ Q+D  K+AVS YF +P+LSPEEI +RL   A    +EK   T   ++P  K   TE  KQLK LA+ IR  L  L W + + GQ+IIE+T EGLRIE ++   SPFFD+GS  P+ +TQ+AL+ I  ++ K  +P+  EGHTD+ PF++  G YGNWELST+RANAARR++   G+   R+  VRG A TRLR    P +  NRRVS+++++ + K P
Sbjct:    8 IIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLWIVGQSDPVKQAVSEYFIDPSLSPEEIAIRLSQAAAEGEQEKMEVTKLETEPEEKA--TE--KQLKDLAKEIRSALEELDWEKELNGQIIIEVTEEGLRIELIDLADSPFFDLGSSHPKPHTQQALKAIGKKLAKGKHPLIFEGHTDASPFVSR-GAYGNWELSTDRANAARRIVLSTGIKADRVKAVRGYAATRLRDKAHPNSPGNRRVSILVQHPDAKDP 260          
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Match: A0A2N1VXU7_9BACT (Chemotaxis protein MotB n=1 Tax=Ignavibacteriae bacterium HGW-Ignavibacteriae-2 TaxID=2013809 RepID=A0A2N1VXU7_9BACT)

HSP 1 Score: 209 bits (531), Expect = 3.180e-63
Identity = 121/256 (47.27%), Postives = 162/256 (63.28%), Query Frame = 1
Query:   19 DNIIIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLWVLAQADKTKKAVSLYFTEPN-LSPEEIKLRLEHPALPSSKEKPSETNTSKPSSKLQYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLENDKSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNGTYGNWELSTERANAARRVLEGGGVH--RIAEVRGLADTRLRTPDDPLNHANRRVSLIIRYV 777
            DNIII+KK KKGGHGHHGG+WKVAYADFVTAMMALFIVLWVL Q D  KK+VS YF +P   SP    +    P+ P     P  T  S+     +  EE  + +++   I++ L   + F S+   +  E+  EGLRIE LE+  + FF +GS        + ++ I  +V  + N + IEGHTD+RPF+  +  Y N+ELST+RANAARR L  GGV   +I E+RG AD RLR P+DP +  NRR+S++I+Y+
Sbjct:    6 DNIIIVKKGKKGGHGHHGGAWKVAYADFVTAMMALFIVLWVLGQNDDVKKSVSSYFKDPTGYSPYGKNVITGAPSSPL----PITTTKSQ-----KREEEKLKFEEMKSKIQEELGQNQAFASVSQYIEFEMINEGLRIELLESADNIFFGIGSSQLNANASKLIQEIGQQVATLNNNIVIEGHTDARPFVAGSENYTNYELSTDRANAARRALIKGGVSTKQIDEIRGCADKRLRNPEDPYSLVNRRISIVIKYL 252          
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Match: A0A2M7ZAN4_9BACT (Chemotaxis protein MotB n=2 Tax=Ignavibacteria TaxID=795747 RepID=A0A2M7ZAN4_9BACT)

HSP 1 Score: 208 bits (530), Expect = 5.080e-63
Identity = 115/255 (45.10%), Postives = 166/255 (65.10%), Query Frame = 1
Query:   19 DNIIIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLWVLAQADKTKKAVSLYFTEPNLSPEEIKLRLEHPALPSSKEKPSETNTSKPSSKLQYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLENDKSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNGTYGNWELSTERANAARRVLEGGGVH--RIAEVRGLADTRLRTPDDPLNHANRRVSLIIRYV 777
            D  II KK+KKGG GHHGG+WKVAYADFVTAMMALFIVLWVL Q++  KKAVS YF +P    +  K  +   +     +K ++ +T K  SK    E+ K+ +++ + I+  L+  K F  ++ ++  E+  EGLRIE LE + + FFD+GS    I   E L+ IA ++  +PN + +EGHTD+RPF   N +Y N+ELS +RAN+ARRVL    +   +I E+RG AD RLR  ++P +  NRR+S++++Y+
Sbjct:    5 DKPIIFKKVKKGGEGHHGGAWKVAYADFVTAMMALFIVLWVLNQSEDVKKAVSNYFKDPTGYSQYGKNIIIGQSSGFMPKKGTDLHTGKGKSK---EEQKKKFEEMKEQIKKELSKNKVFTDIENKIKFEIVNEGLRIEMLETEDNFFFDIGSSRLNIKAIEVLKKIAKQISSLPNLIVVEGHTDARPFAAGNESYTNYELSADRANSARRVLIENNISTDKIDEIRGYADKRLRDSENPFSLVNRRISIVLKYM 256          
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Match: A0A2V9U5W3_9BACT (Flagellar motor protein MotB n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9U5W3_9BACT)

HSP 1 Score: 207 bits (528), Expect = 1.260e-62
Identity = 124/277 (44.77%), Postives = 174/277 (62.82%), Query Frame = 1
Query:   25 IIIIKKIKKGGHG-HHGGSWKVAYADFVTAMMALFIVLWVLAQADKTKKAVSLYFTEPNLSPEEIKLRLEHPALPSSKEKPSETNTSKPSSKLQYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLENDKSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNGTYGNWELSTERANAARRVLEGGGVH--RIAEVRGLADTRLRTPDDPLNHANRRVSLIIRYVNGKPPSEKVEPEGAKKSEDSKPE 846
            IIIIKK  K GHG HHGG+WKVAYADFVTAMMALFIVLW+L  +   ++A++ YF +P+ +  ++           SK   +  N         +T     +  L + ++  +  +  F  +Q Q+ + +T EGLRIE +E +   FFDVGSP P    +E L ++A E+ KVPN ++IEGHTDSRPF T  G YGNWELS +RANAARR+++  GV   +I++VRG AD  LR P+DP + +NRR+SLI++Y+N     ++ +PE AK  E   P+
Sbjct:    8 IIIIKK--KAGHGGHHGGAWKVAYADFVTAMMALFIVLWLLNTSKPVREAIAGYFRDPSGTANKM----------GSKNVGAGEN---------FTITKDNVSDLMEKLQKTIQQMPDFDKLQHQIEMTITSEGLRIEMMETETGTFFDVGSPRPNGNGKELLVLLAQELGKVPNRISIEGHTDSRPF-TKRGDYGNWELSVDRANAARRLMQQNGVRPDQISQVRGFADQMLRKPNDPQDPSNRRISLIVQYIN----KDEQQPENAKAGEGKSPD 258          
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Match: A0A7V9CNP3_9BACT (OmpA family protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V9CNP3_9BACT)

HSP 1 Score: 204 bits (519), Expect = 3.420e-61
Identity = 115/258 (44.57%), Postives = 168/258 (65.12%), Query Frame = 1
Query:   25 IIIIKKIKKGGHG-HHGGSWKVAYADFVTAMMALFIVLWVLAQADKTKKAVSLYFTEPNLSPEE---IKLRLEHPALPSSKEKPSETNTSKPSSKLQYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLENDKSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNGTYGNWELSTERANAARRVLEGGGVH--RIAEVRGLADTRLRTPDDPLNHANRRVSLIIRYVN 780
            +IIIK+ KKGGHG HHGG+WKVAYADFVTAMMA F+V+W++ Q+ + K++V+ YFT+P +   +     +   + AL   +  P +  ++           T  L++ A  I+ +L  L  FR+++ Q+ +++T EGLRIE  E+ +  FFD GS   +  T++ L++IA E+  +  PVAIEGHTD+ PF T  G Y NWELS +RANAARRV+EG G+   +I  +RG A T LRTPD+P N  NRRVS++++  +
Sbjct:    7 VIIIKR-KKGGHGGHHGGAWKVAYADFVTAMMAFFLVMWLVNQSQEVKESVAAYFTDPGIFEHQKGNAPIAGGNGALNGMRPPPPDVVSA-----------TASLERAAARIKGQLRMLPGFRNLEDQIDVQVTAEGLRIELQESGQDTFFDSGSSHLKRETEQVLQVIARELAALAQPVAIEGHTDAAPFGTGRG-YTNWELSADRANAARRVMEGAGLEPTQIKAIRGFAATSLRTPDEPYNPRNRRVSIVVQQAS 251          
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Match: A0A3N5PRP5_9BACT (Chemotaxis protein MotB n=1 Tax=Ignavibacteriales bacterium TaxID=2049428 RepID=A0A3N5PRP5_9BACT)

HSP 1 Score: 202 bits (515), Expect = 1.040e-60
Identity = 118/259 (45.56%), Postives = 162/259 (62.55%), Query Frame = 1
Query:   19 DNIIIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLWVLAQADKTKKAVSLYFTEPNLSPEEIKLRLEHPALPSSKEKPSETNTSKPSSKLQYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLENDKSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNGTYGNWELSTERANAARRVLEGGGVH--RIAEVRGLADTRLRTPDDPLNHANRRVSLIIRYVNGKP 789
            DNII++KKI K G GHHGG+WKVAYADFVTAMMALFIVLW+L Q ++ KK V+ YF +P    E++K       L    + P++  T       Q  +E  QL  +  +I   L+    F ++  Q+ +E+  EGLRIE +E++ + FF++G+   R   Q+ L+ I   +  +PN + IEGHTDSRP+    G Y N+ELST+RAN+ARRV+  GG+   RI EVRG ADTRL    DP N  NRR+S+II++    P
Sbjct:    6 DNIIVVKKINKHG-GHHGGAWKVAYADFVTAMMALFIVLWILGQEEEIKKNVAGYFKDPVGFSEKMKAIS---VLDGMMQLPTDVATDAIDKIKQREQEVAQLNAMKDSIISDLSANGEFTNLMDQVKMEIVNEGLRIEMMESNDNVFFEIGTSQLRPEAQKLLKEIGKNLIVIPNRLIIEGHTDSRPYSNDGGGYTNFELSTDRANSARRVILSGGLDFGRIDEVRGYADTRLLDKKDPFNLVNRRISIIIKFATEGP 260          
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Match: A0A7C4G180_9BACT (Flagellar motor protein MotB n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7C4G180_9BACT)

HSP 1 Score: 201 bits (511), Expect = 3.360e-60
Identity = 112/269 (41.64%), Postives = 167/269 (62.08%), Query Frame = 1
Query:   28 IIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLWVLAQADKTKKAVSLYFTEPNLSPEEIKLRLEHPALPSSKEKPSETNTSKPSSKLQYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLENDKSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNGTYGNWELSTERANAARRVLEGGGVHR--IAEVRGLADTRLRTPDDPLNHANRRVSLIIRYVNGKPPSEKVEPEGAKKS 828
            IIIKK   G  GHHGG+WKVAYADFVTAMMALFIVLW++  + K ++AV  YF +P+      K ++    +  +  +P +                  ++ L + I   +  L  F+ ++ Q+I+ +T EGLR+E LE +K  FF++GS  P    +  L+ +A E+ K+PN + IEGHTDSRP++  NG Y NWELS +RANAARR++   GV +  +A++RGLAD RL  P++P + +NRRVS++++Y+    P ++  P GA K+
Sbjct:    8 IIIKKKVAGHGGHHGGAWKVAYADFVTAMMALFIVLWLMNSSKKVQEAVGGYFRDPS-----GKGKISGSGIAGNVPEPKDD-----------------MQSLKEKIEAAIRQLPEFQRIKDQVILTITAEGLRVELLETEKGMFFELGSAKPTPSGENMLQQLAAELAKLPNRLQIEGHTDSRPYVRENG-YSNWELSADRANAARRLMMEAGVRKDQVAQIRGLADQRLLVPEEPESPSNRRVSVLVQYLETAKPPDEARPGGAAKA 253          
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Match: A0A7Y5B514_9BACT (OmpA family protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7Y5B514_9BACT)

HSP 1 Score: 201 bits (512), Expect = 5.690e-60
Identity = 112/267 (41.95%), Postives = 165/267 (61.80%), Query Frame = 1
Query:   19 DNIIIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLWVLAQADKTKKAVSLYFTEPN---------LSPEEIKLRLEHPALPSSKEKPSETNTSKPSSKLQYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLENDKSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNGTYGNWELSTERANAARRVLEGGGV--HRIAEVRGLADTRLRTPDDPLNHANRRVSLIIRYVNGK 786
            D I +IKK KKGGHGHHGG+WKVAYADFVTAMMA F+V+W++    +T++A++ YF +P+          SP E++   + P      E        KP +K    E+ K   ++ Q++      ++   +++  L +++  EGLRIE +E  +  FF++GS   +    +A  +I  EV K+ NP+ +EGHTDSRP+  H  +Y NWELS++RANAARR LE  GV   +++ VRG AD RLR P DP + +NRRVSL++ Y++ K
Sbjct:    3 DEIRVIKK-KKGGHGHHGGAWKVAYADFVTAMMAFFLVMWLIGLDSETRRAIAGYFRDPSGILEVQPQGKSPIELE-GFKPPTTAKDNESRESPQGKKPKTK---EEQQKSFAQIKQSLEKAFAAMRDLAALKDHLTVKIVDEGLRIELVEGAEPLFFELGSARMKPAAVKAFGLIGAEVSKLDNPIVVEGHTDSRPYA-HGRSYTNWELSSDRANAARRALEDSGVPTDQVSSVRGYADARLRVPSDPYHFSNRRVSLLLPYLSDK 263          
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Match: A0A7V5RYI4_9BACT (Chemotaxis protein MotB n=2 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V5RYI4_9BACT)

HSP 1 Score: 201 bits (511), Expect = 6.720e-60
Identity = 117/271 (43.17%), Postives = 163/271 (60.15%), Query Frame = 1
Query:    1 MAAKATDNIIIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLWVLAQADKTKKAVSLYFTEPNLSPEEIKLRLE------HPALPSSKEKPSETNTSKPSS---KLQYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLENDKSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNGTYGNWELSTERANAARRVLEGGGVHR--IAEVRGLADTRLRTPDDPLNHANRRVSLIIRYVN 780
            MA +    I I+KK K GGHGHHGG+WKVAYADFVTAMMA F+V+W++    KT+ A++ YF +P    + ++ + E          P  K  P+    +K      K     E K+L++  + +   L+ +     ++  + IE   EGLRIE LE  +  FF  GS       ++ LR+IA +V K+ N V +EGHTD++P+  + G Y NWELS +RANAARRVLEG G+ +  +AEVRG ADTRLR P DP + +NRRVSL+I Y +
Sbjct:    1 MAKEGGGEIRIVKK-KNGGHGHHGGAWKVAYADFVTAMMAFFMVMWLIGMDAKTRAAIAAYFRDPVGFMQAVRAKSEAVFTINDSMPPGGKNTPNMPRAAKDGKTVIKKDRQTERKELEEFKKYVETALSNIPELSRLKEHVKIEFVKEGLRIELLEGKEPVFFQTGSATVTPAARQLLRLIAQKVGKLDNRVIVEGHTDAQPYR-YGGGYSNWELSADRANAARRVLEGAGLWKGQVAEVRGYADTRLRNPHDPFHFSNRRVSLLIPYAS 269          
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Match: A0A2N9LPN3_9BACT (OmpA/MotB domain protein n=1 Tax=Candidatus Sulfopaludibacter sp. SbA3 TaxID=2043164 RepID=A0A2N9LPN3_9BACT)

HSP 1 Score: 200 bits (509), Expect = 9.370e-60
Identity = 113/253 (44.66%), Postives = 162/253 (64.03%), Query Frame = 1
Query:   25 IIIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLWVLAQADKTKKAVSLYFTEPNLSPEEIKLRLEHPALPSSKEKPSETNTSKPSSKLQYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLENDKSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNGTYGNWELSTERANAARRVLEGGGVH--RIAEVRGLADTRLRTPDDPLNHANRRVSLIIRYV 777
            I IIK+ K G  GHHGG+WKVAYADFVTAMMALFIVLW+++  ++ KKA+S YF  P+  P ++        L ++ E P +                  +KKLA+ I+  L  +  FR+++  + I +T +GLRIE LE D   FF+ G   P     E L+ ++ E+ K+PN V IEGHTDS+PF + +  Y NWELST+RAN+AR+++E GG+   ++A+VRG AD +LR PDDP   +NRR+S+I++Y+
Sbjct:   17 IFIIKRKKAGHAGHHGGAWKVAYADFVTAMMALFIVLWLMSADEEVKKAISAYFNNPS-GPGKL-TGTAAAGLGNALEVPKDD-----------------MKKLAEKIQQALMSVPNFRALKDHVEITITSDGLRIELLETDAGMFFESGRAVPTEGGTELLQHLSDELGKLPNNVLIEGHTDSKPF-SRDDAYSNWELSTDRANSARKLMEAGGLRPGQVAQVRGYADRQLRHPDDPQASSNRRISVIVQYL 249          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14985.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9UB57_9BACT1.650e-8154.65OmpA-like domain-containing protein n=1 Tax=Phycis... [more]
A0A2N1VXU7_9BACT3.180e-6347.27Chemotaxis protein MotB n=1 Tax=Ignavibacteriae ba... [more]
A0A2M7ZAN4_9BACT5.080e-6345.10Chemotaxis protein MotB n=2 Tax=Ignavibacteria Tax... [more]
A0A2V9U5W3_9BACT1.260e-6244.77Flagellar motor protein MotB n=1 Tax=Acidobacteria... [more]
A0A7V9CNP3_9BACT3.420e-6144.57OmpA family protein n=1 Tax=Acidobacteria bacteriu... [more]
A0A3N5PRP5_9BACT1.040e-6045.56Chemotaxis protein MotB n=1 Tax=Ignavibacteriales ... [more]
A0A7C4G180_9BACT3.360e-6041.64Flagellar motor protein MotB n=1 Tax=Bryobacterace... [more]
A0A7Y5B514_9BACT5.690e-6041.95OmpA family protein n=1 Tax=Armatimonadetes bacter... [more]
A0A7V5RYI4_9BACT6.720e-6043.17Chemotaxis protein MotB n=2 Tax=Armatimonadetes ba... [more]
A0A2N9LPN3_9BACT9.370e-6044.66OmpA/MotB domain protein n=1 Tax=Candidatus Sulfop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14985contigP-wetherbeei_contig14985:753..1643 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog671143.DAMO_1765
Preferred namemotB
PFAMsMotB_plug,OmpA
Model size891
Max annot lvl2|Bacteria
KEGG koko:K02557
KEGG TC1.A.30.1
KEGG Pathwayko02030,ko02040,map02030,map02040
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.86e-60
EggNOG OGsCOG1360@1|root,COG1360@2|Bacteria
DescriptionFlagellar Motor Protein
Cds size891
COG categoryN
BRITEko00000,ko00001,ko02000,ko02035
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186039.2399669-CDS-P-wetherbeei_contig14985:752..16431683186039.2399669-CDS-P-wetherbeei_contig14985:752..1643Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14985 753..1643 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14985.1.1prot_P-wetherbeei_contig14985.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14985 753..1643 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14985.1.1

>prot_P-wetherbeei_contig14985.1.1 ID=prot_P-wetherbeei_contig14985.1.1|Name=mRNA_P-wetherbeei_contig14985.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=297bp
MAAKATDNIIIIKKIKKGGHGHHGGSWKVAYADFVTAMMALFIVLWVLAQ
ADKTKKAVSLYFTEPNLSPEEIKLRLEHPALPSSKEKPSETNTSKPSSKL
QYTEETKQLKKLAQTIRDRLNGLKWFRSMQGQLIIELTPEGLRIEFLEND
KSPFFDVGSPAPRIYTQEALRIIATEVCKVPNPVAIEGHTDSRPFLTHNG
TYGNWELSTERANAARRVLEGGGVHRIAEVRGLADTRLRTPDDPLNHANR
RVSLIIRYVNGKPPSEKVEPEGAKKSEDSKPEPVASPQPESAPSPSP
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mRNA from alignment at P-wetherbeei_contig14985:753..1643+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14985.1.1 ID=mRNA_P-wetherbeei_contig14985.1.1|Name=mRNA_P-wetherbeei_contig14985.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig14985:753..1643+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGCCAAAGCAACTGATAACATCATAATTATCAAGAAAATCAAGAA GGGGGGTCATGGCCACCACGGGGGCAGCTGGAAGGTAGCCTACGCGGACT TTGTGACGGCTATGATGGCCCTCTTCATCGTCTTGTGGGTCCTGGCCCAG GCTGACAAAACGAAAAAGGCCGTGAGTCTCTATTTTACCGAGCCAAACCT TTCCCCTGAGGAGATCAAACTTCGACTCGAGCATCCAGCCCTCCCCAGCT CCAAAGAGAAACCCTCGGAAACAAATACCTCGAAGCCATCGAGCAAACTC CAATATACTGAAGAAACCAAACAACTGAAAAAACTGGCCCAGACAATTCG GGATCGGCTGAACGGATTGAAATGGTTTCGAAGTATGCAGGGCCAGCTCA TTATCGAGTTGACGCCAGAGGGGCTCCGCATCGAATTTCTTGAAAATGAC AAAAGCCCGTTCTTTGACGTCGGAAGCCCGGCGCCGCGCATCTACACCCA GGAAGCCCTCAGGATCATTGCGACGGAAGTCTGTAAGGTTCCCAATCCCG TAGCCATCGAAGGACACACGGATAGTCGACCCTTTCTCACACACAACGGG ACCTATGGAAATTGGGAACTCTCCACGGAGAGAGCCAATGCAGCCCGGCG GGTGCTGGAGGGAGGAGGTGTCCATCGGATCGCTGAGGTTCGCGGCCTGG CTGATACCCGTCTCAGAACACCCGACGACCCCTTAAATCATGCAAATCGC CGCGTATCTTTAATTATCCGGTACGTCAATGGCAAACCACCGAGTGAAAA GGTCGAGCCCGAAGGTGCCAAGAAAAGTGAGGACTCCAAGCCGGAGCCGG TGGCCAGTCCCCAACCCGAAAGCGCGCCAAGCCCGTCCCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14985:753..1643+

>mRNA_P-wetherbeei_contig14985.1.1 ID=mRNA_P-wetherbeei_contig14985.1.1|Name=mRNA_P-wetherbeei_contig14985.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig14985:753..1643+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGCCAAAGCAACTGATAACATCATAATTATCAAGAAAATCAAGAA
GGGGGGTCATGGCCACCACGGGGGCAGCTGGAAGGTAGCCTACGCGGACT
TTGTGACGGCTATGATGGCCCTCTTCATCGTCTTGTGGGTCCTGGCCCAG
GCTGACAAAACGAAAAAGGCCGTGAGTCTCTATTTTACCGAGCCAAACCT
TTCCCCTGAGGAGATCAAACTTCGACTCGAGCATCCAGCCCTCCCCAGCT
CCAAAGAGAAACCCTCGGAAACAAATACCTCGAAGCCATCGAGCAAACTC
CAATATACTGAAGAAACCAAACAACTGAAAAAACTGGCCCAGACAATTCG
GGATCGGCTGAACGGATTGAAATGGTTTCGAAGTATGCAGGGCCAGCTCA
TTATCGAGTTGACGCCAGAGGGGCTCCGCATCGAATTTCTTGAAAATGAC
AAAAGCCCGTTCTTTGACGTCGGAAGCCCGGCGCCGCGCATCTACACCCA
GGAAGCCCTCAGGATCATTGCGACGGAAGTCTGTAAGGTTCCCAATCCCG
TAGCCATCGAAGGACACACGGATAGTCGACCCTTTCTCACACACAACGGG
ACCTATGGAAATTGGGAACTCTCCACGGAGAGAGCCAATGCAGCCCGGCG
GGTGCTGGAGGGAGGAGGTGTCCATCGGATCGCTGAGGTTCGCGGCCTGG
CTGATACCCGTCTCAGAACACCCGACGACCCCTTAAATCATGCAAATCGC
CGCGTATCTTTAATTATCCGGTACGTCAATGGCAAACCACCGAGTGAAAA
GGTCGAGCCCGAAGGTGCCAAGAAAAGTGAGGACTCCAAGCCGGAGCCGG
TGGCCAGTCCCCAACCCGAAAGCGCGCCAAGCCCGTCCCCC
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