mRNA_P-wetherbeei_contig14864.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Match: UPI0019A97148 (CpaD family pilus assembly protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019A97148) HSP 1 Score: 162 bits (410), Expect = 6.830e-47 Identity = 82/178 (46.07%), Postives = 114/178 (64.04%), Query Frame = 1
Query: 43 LAACSNGELALDDTYVPAAHYERYPIEVTNGPVRMEVSSRQGTLQSSQINAISGFSRSASNSGSSRITVLRPSAGGASGKVARQVYQVLVQSGIAPGMIVQKTYPGPSKGSVQLSYTRSVAVTKECGDWSEELSNTSRNETYPNFGCSMQNNIAAMVVNPNDFVLPRPTTPALAASRT 576
L+ C+ E+AL+D Y PA HYE+YPIEV PV+M +++R GTL QINA + F+ A N+ S+I++ P+ G S KVA + Q+ G+ I +YPGP +++SY R VAVT+ECGDWS +LS+ N + N+GC+ Q+NIAAMV P DF PR +P AA+RT
Sbjct: 25 LSGCALDEVALEDHYAPATHYEKYPIEVRKAPVKMGIAARAGTLTPEQINAATNFAHDARNNAQSKISIRWPTGDGKSRKVAHDIAQLFADEGVPHSKIGVGSYPGPKSSPIRISYVRKVAVTRECGDWSGDLSHDPANTFHQNYGCATQHNIAAMVARPEDFERPRAISPVEAANRT 202
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Match: A0A849EEF0_9HYPH (CpaD family pilus assembly lipoprotein n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849EEF0_9HYPH) HSP 1 Score: 147 bits (370), Expect = 9.890e-41 Identity = 79/186 (42.47%), Postives = 115/186 (61.83%), Query Frame = 1
Query: 16 ILFIAMSSTLAACSNGELALDDTYVPAAHYERYPIEVTNGPVRMEVSSRQGTLQSSQINAISGFSRSASNSGSSRITVLRPSAGGASGKVARQVYQVLVQSGIAPGMIVQKTYPGPSKGSVQLSYTRSVAVTKECGDWSEELSNTSRNETYPNFGCSMQNNIAAMVVNPNDFVLPRPTTPALAASR 573
+ +A+++ S G +DD Y+P HYE +PIEV G V+++V +R L + + NA+ F+ A+ + +S++ V RP+ G VA +V Q+L + GI+P I +Y G ++ V +S+TR AVT ECGDWSE LS T N+ Y NFGCS Q+N+AAMV NP DF PR +T A A+ R
Sbjct: 19 VALLALTACQHQMSGG---VDDVYMPQMHYENHPIEVAKGTVKLQVPTRSAKLTTKEQNAVRQFAHQANETDASKVHVRRPAGGMVGNAVAAKVAQLLEREGISPHRIKHSSYKGGARSPVLMSFTRKFAVTAECGDWSENLSETYSNQNYKNFGCSGQHNLAAMVANPEDFEAPRTSTSASASRR 201
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Match: A0A3B0T8N7_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0T8N7_9ZZZZ) HSP 1 Score: 133 bits (335), Expect = 1.770e-35 Identity = 75/181 (41.44%), Postives = 107/181 (59.12%), Query Frame = 1
Query: 40 TLAACS---NGELALDDTYVPAAHYERYPIEVTNGPVRMEVSSRQGTLQSSQINAISGFSRSASNSGSSRITVLRPSAGGASGKVARQVYQVLVQSGIAPGMIVQKTYPGPSKGSVQLSYTRSVAVTKECGDWSEELSNTSRNETYPNFGCSMQNNIAAMVVNPNDFVLPRPTTPALAASR 573
TL AC+ NGE+ DD Y P A ERYPIEV G V++ V +R L +SQ +A++ F++ A +SG+ ++ + RPS +A ++ QV + G+ + TY V LS+ R A TK CG+WS++ S + N+ Y +FGCS Q N+AA VVNP DFV PR +TP+ A R
Sbjct: 22 TLGACAQGWNGEI--DDVYQPVAVSERYPIEVVKGTVKVNVPTRSARLTASQRDAVTRFAQQARSSGAQKVNIRRPSGSVNGDVIAGRITQVFAEQGVGAEFLQHSTYKAHRGAPVSLSFVRKFARTKNCGNWSKDFSESGDNQPYEDFGCSSQYNLAAQVVNPQDFVTPRTSTPSDAMRR 200
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Match: UPI0018C6EBD9 (CpaD family pilus assembly lipoprotein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C6EBD9) HSP 1 Score: 129 bits (325), Expect = 4.740e-34 Identity = 70/180 (38.89%), Postives = 107/180 (59.44%), Query Frame = 1
Query: 16 ILFIAMSSTLAACSNGELALDDTY-VPAAHYERYPIEVTNGPVRMEVSSRQGTLQSSQINAISGFSRSASNSGSSRITVLRPSAGGASGKVARQVYQVLVQSGIAPGMIVQKTYPGPSKGSVQLSYTRSVAVTKECGDWSEELSNTSRNETYPNFGCSMQNNIAAMVVNPNDFVLPRPTT 552
+L +A TL+ C ++ T P+ +R+PIEV GP +++ +R G L Q NA+ F A +G + +TV RPS G S ++A +V +VL + G+ + +TY G G V++S+ S A TK CGDWSE+L+ T+ N+ YPN GC++Q+NIAAMV NP +P+P +
Sbjct: 15 LLLVASLFTLSGCMADQMMTGSTDPAPSRGSDRFPIEVVKGPQILQIDARGGRLSLEQTNAVRSFVHQAQAAGVTPMTVSRPSGKGPSFQIAGEVARVLSEEGVQQDRVHFETYRGAGNGPVRISFVSSYAKTKTCGDWSEDLTTTASNDGYPNLGCAVQSNIAAMVANPETLDVPKPAS 194
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Match: A0A7Y2BRU1_9HYPH (CpaD family pilus assembly lipoprotein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2BRU1_9HYPH) HSP 1 Score: 123 bits (308), Expect = 1.780e-31 Identity = 69/181 (38.12%), Postives = 105/181 (58.01%), Query Frame = 1
Query: 31 MSSTLAACSNGELALDDTYVPAAHYERYPIEVTNGPVRMEVSSRQGTLQSSQINAISGFSRSASNSGSSRITVLRPSAGGASGKVARQVYQVLVQSGIAPGMIVQKTYPGPSKGSVQLSYTRSVAVTKECGDWSEELSNTSRNETYPNFGCSMQNNIAAMVVNPNDFVLPRPTTPALAASR 573
++ LA CS +DD Y HYE++PI VT G V+M+V + + ++ +A+ F++ A + + + + RP ++ VA +V Q++ G+ ++ TY G G V +SY R A T ECGDWSE+L+ T N PN+GC+ Q+N+AAMVVNP DFV PR + P+ A R
Sbjct: 20 LALALAGCSGVNGGIDDVYHATTHYEQHPITVTKGTVKMQVPAHSSRMTAAHEDAVIRFAQQAKDHEAGTVYIKRPKGSVSADVVAGRVTQLMAAEGVTTRVMKHATYGG--HGPVIVSYKRHFASTNECGDWSEDLTVTFENTFPPNYGCASQHNLAAMVVNPKDFVQPRTSAPSDATRR 198
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Match: A0A832ENR4_9RHOB (Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A832ENR4_9RHOB) HSP 1 Score: 93.6 bits (231), Expect = 7.430e-20 Identity = 59/187 (31.55%), Postives = 94/187 (50.27%), Query Frame = 1
Query: 25 IAMSSTLAAC--SNGELALDDTYVPAAHYERYPIEVTNGPV--RMEVSSRQGTLQSSQINAISGFSRSASNSGSSRITVLRPSAGG---ASGKVARQVYQVLVQSGIAPGMIVQKTY---PGPSKGSVQLSYTRSVAVTKECGDWSEELSNTSRNETYPNFGCSMQNNIAAMVVNPNDFVLPRPTTP 555
+A++ L C S + + + H ER+PI V G V ++EV L +Q ++GF R + G+ +T++ P G A+ + + ++L G+ P + TY PG + V + Y+R A +CG+W L+ N+ YPNF C+ +NN+AAMV NP D V+PR TP
Sbjct: 31 LALTLALGGCLSSRSDSLMTGSVNSPVHSERHPIAVRTGLVELKIEVLRHMAALSPNQSGKVAGFVRGYKSIGAGPLTIMVPRGGRNEIAATRAMDTIREILDHEGVPPRAVRSMTYSASPGQANPPVVMKYSRYYATPSKCGNWPGNLAAEFENKPYPNFACASRNNLAAMVANPRDLVVPRTMTP 217
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Match: A0A084U612_9HYPH (Pilus (Caulobacter type) biogenesis lipoprotein CpaD n=1 Tax=Nitratireductor basaltis TaxID=472175 RepID=A0A084U612_9HYPH) HSP 1 Score: 91.7 bits (226), Expect = 2.560e-19 Identity = 66/193 (34.20%), Postives = 99/193 (51.30%), Query Frame = 1
Query: 16 ILFIAMSSTLAACSNGELALDDTYVPAAHYERYPIEVTNGP--VRMEVSSRQGTLQSSQINAISGFSRSASNSGSSRITVLRPSAGGASGK---VARQVYQVLVQSGIAPGMIVQKTYPG-PSKGS-VQLSYTRSVAVTKECGDWSEELSNTSRNETYPNFGCSMQNNIAAMVVNPNDFVLPRPTTPALAASR 573
IL + ++S LA C+ ++ VP + R+PI + G + + V+S + Q AISGF + + SG S +++L P+ S VAR + + G+ G I Y P + + ++LSY+R A +CG W +L T N + NFGCS QNN+AA V NP DF+ PR TP A +R
Sbjct: 13 ILAVVLASLLAGCAAKRDSVIVGSVPEDYRTRHPIVIAEGVEVLDLPVASTSNRMTYQQKAAISGFLSNYAESGGSVVSILVPAGAANSAAALDVARDFRDYIARRGVHAGQIQLLNYQAQPDRAAPIRLSYSRVKAQVGQCGRWPSDLLKTEENRNWENFGCSYQNNLAAQVANPMDFLGPREMTPIDAENR 205
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Match: J2KUZ1_9HYPH (Caulobacter-type pilus biogenesis lipoprotein CpaD n=13 Tax=Rhizobium TaxID=379 RepID=J2KUZ1_9HYPH) HSP 1 Score: 90.9 bits (224), Expect = 5.430e-19 Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 1
Query: 43 LAACSNGELALDDTYVPAAHYERYPIEVTNGP--VRMEVSSRQGTLQSSQINAISGFSRSASNSGSSRITVLRPSAG---GASGKVARQVYQVLVQSGIAPGMIVQKTYPGPS---KGSVQLSYTRSVAVTKECGDWSEELSNTSRNETYPNFGCSMQNNIAAMVVNPNDFVLPRPTTP 555
L+ C+ L +P + ER+PI VT V + V+S L +Q I GF+++ + S + +L P GA+ + QV L GIA I+ +Y ++LS+T + AVT +CG W ++++ N+ Y NFGC+ QNN+AA V NP DFV PR TP
Sbjct: 26 LSGCAGPHDQLTTGGIPDDYRERHPIVVTEAEQTVDIPVASSDRRLTIAQRELIRGFAQNYVSRASGPVYILSPEGSANAGAARALRSQVRAELASRGIASNKIINTSYAATGVLDAAPIRLSFTGTTAVTTQCGQWPKDITADFTNQNYYNFGCASQNNLAAQVANPEDFVAPRGMTP 204
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Match: A0A4R3GRP0_9HYPH (Pilus assembly protein CpaD n=5 Tax=unclassified Rhizobium TaxID=2613769 RepID=A0A4R3GRP0_9HYPH) HSP 1 Score: 90.1 bits (222), Expect = 1.060e-18 Identity = 60/179 (33.52%), Postives = 90/179 (50.28%), Query Frame = 1
Query: 43 LAACSNGELALDDTYVPAAHYERYPIEVTNGP--VRMEVSSRQGTLQSSQINAISGFSRSASNSGSSRITVLRPSAG---GASGKVARQVYQVLVQSGIAPGMIVQKTYPGPS---KGSVQLSYTRSVAVTKECGDWSEELSNTSRNETYPNFGCSMQNNIAAMVVNPNDFVLPRPTTP 555
L+ C+ L +P + ER+PI VT V + V+S L +Q I GF+++ + S + +L P GA+ + QV L GIA I+ +Y ++LS+T + AVT +CG W +++ N+ Y NFGC+ QNN+AA V NP DF+ PR TP
Sbjct: 26 LSGCAGPRDQLTTGGIPDDYRERHPIVVTEAEQTVDIPVASTDRRLSIAQREMIRGFAQNYLSRASGPVYILSPEGSPNAGAARALRSQVRAELASRGIASNKIINTSYAATGVLDSAPLRLSFTGTTAVTTQCGQWPRDIAADFTNQNYYNFGCASQNNLAAQVANPEDFIAPRGMTP 204
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Match: A0A2G1QU53_9HYPH (Pilus assembly protein CpaD n=2 Tax=Zhengella mangrovi TaxID=1982044 RepID=A0A2G1QU53_9HYPH) HSP 1 Score: 89.4 bits (220), Expect = 2.160e-18 Identity = 63/189 (33.33%), Postives = 97/189 (51.32%), Query Frame = 1
Query: 16 ILFIAMSSTLAACSNGELALDDTYV---PAAHYERYPIEVTNGPVRMEVSSRQGT--LQSSQINAISGFSRSASNSGSSRITVL----RPSAGGASGKVARQVYQVLVQSGIAPGMIVQKTYPGPSKG---SVQLSYTRSVAVTKECGDWSEELSNTSRNETYPNFGCSMQNNIAAMVVNPNDFVLPRP 546
+L +A ++ L C++ + D V P + +PI + +V Q L +Q +AI GF S S + ++ P+A GAS +VA + ++ + G+ G I +Y G S G +++SYTR +A T +CG W + LS ++ N Y NFGCS QNN+AA V NP D + PRP
Sbjct: 22 VLVLAAATALGGCAS--MKRDHVIVGSVPQDYRTNHPITIAEREAVYDVPVAQDAKALSKAQGDAIRGFMAGYERSNGSEVRIIVPVGSPNAVGAS-RVAGDIVNLMTRHGVPAGRINTYSYEGGSDGYSAPIRISYTRLMASTDKCGRWPDNLSESTENRNYENFGCSYQNNLAAQVANPADLLGPRP 207 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14864.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14864.2.1 >prot_P-wetherbeei_contig14864.2.1 ID=prot_P-wetherbeei_contig14864.2.1|Name=mRNA_P-wetherbeei_contig14864.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=195bp MSVILFIAMSSTLAACSNGELALDDTYVPAAHYERYPIEVTNGPVRMEVSback to top mRNA from alignment at P-wetherbeei_contig14864:969..1559- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14864.2.1 ID=mRNA_P-wetherbeei_contig14864.2.1|Name=mRNA_P-wetherbeei_contig14864.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig14864:969..1559- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14864:969..1559- >mRNA_P-wetherbeei_contig14864.2.1 ID=mRNA_P-wetherbeei_contig14864.2.1|Name=mRNA_P-wetherbeei_contig14864.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=585bp|location=Sequence derived from alignment at P-wetherbeei_contig14864:969..1559- (Phaeothamnion wetherbeei SAG_119_79)back to top |